Query 043696
Match_columns 521
No_of_seqs 267 out of 1408
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 07:27:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043696.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043696hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 6E-46 1.3E-50 383.0 24.7 235 185-435 19-295 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 1.6E-40 3.5E-45 329.2 23.4 230 189-434 1-240 (240)
3 cd06914 GT8_GNT1 GNT1 is a fun 100.0 1.9E-36 4.2E-41 306.0 20.8 242 189-434 1-278 (278)
4 cd00505 Glyco_transf_8 Members 100.0 6.2E-32 1.3E-36 267.9 17.9 202 190-401 2-245 (246)
5 cd04194 GT8_A4GalT_like A4GalT 100.0 1.1E-30 2.4E-35 258.3 14.5 203 195-401 5-247 (248)
6 PF01501 Glyco_transf_8: Glyco 100.0 7E-31 1.5E-35 254.7 12.0 201 195-403 4-249 (250)
7 PRK15171 lipopolysaccharide 1, 100.0 1.3E-29 2.8E-34 263.2 21.4 221 193-436 28-291 (334)
8 cd06429 GT8_like_1 GT8_like_1 100.0 2.4E-27 5.3E-32 238.0 18.3 204 200-432 9-257 (257)
9 COG1442 RfaJ Lipopolysaccharid 99.9 1.7E-27 3.8E-32 245.4 16.7 201 195-404 7-248 (325)
10 cd06431 GT8_LARGE_C LARGE cata 99.9 8.9E-27 1.9E-31 236.6 20.6 201 190-403 4-254 (280)
11 KOG1950 Glycosyl transferase, 99.9 3.8E-28 8.2E-33 255.2 4.5 353 125-482 7-368 (369)
12 cd06430 GT8_like_2 GT8_like_2 99.9 1.9E-22 4.1E-27 206.2 18.0 197 192-398 3-257 (304)
13 cd06432 GT8_HUGT1_C_like The C 99.9 6.9E-22 1.5E-26 197.6 16.1 185 196-396 7-239 (248)
14 PLN02523 galacturonosyltransfe 99.9 2.8E-21 6.1E-26 207.9 18.5 212 202-438 258-552 (559)
15 PLN02718 Probable galacturonos 99.8 8.5E-21 1.8E-25 206.3 14.3 194 199-403 321-576 (603)
16 PLN02769 Probable galacturonos 99.8 1.1E-19 2.4E-24 198.4 15.3 212 202-438 340-623 (629)
17 PLN02659 Probable galacturonos 99.8 5.2E-19 1.1E-23 189.9 12.1 152 263-439 330-527 (534)
18 PLN02867 Probable galacturonos 99.8 3.8E-19 8.3E-24 191.6 10.9 133 263-404 331-509 (535)
19 PLN02870 Probable galacturonos 99.8 2.8E-19 6E-24 192.0 9.4 156 263-444 329-530 (533)
20 PLN02742 Probable galacturonos 99.8 6.4E-18 1.4E-22 181.9 15.5 213 202-439 237-529 (534)
21 PLN02829 Probable galacturonos 99.8 2.6E-18 5.6E-23 186.8 11.9 131 263-403 443-612 (639)
22 COG5597 Alpha-N-acetylglucosam 99.7 2.7E-18 5.8E-23 172.6 1.6 218 185-434 67-359 (368)
23 PLN02910 polygalacturonate 4-a 99.7 4.1E-17 8.8E-22 177.4 10.8 131 263-403 461-630 (657)
24 PF11051 Mannosyl_trans3: Mann 98.2 9.6E-06 2.1E-10 82.5 11.0 112 198-318 9-124 (271)
25 PF03407 Nucleotid_trans: Nucl 97.7 0.00026 5.6E-09 68.6 11.1 123 229-351 11-153 (212)
26 KOG1879 UDP-glucose:glycoprote 95.9 0.053 1.1E-06 64.7 11.2 169 192-362 1184-1400(1470)
27 PLN03182 xyloglucan 6-xylosylt 94.3 0.52 1.1E-05 50.9 12.2 130 271-405 193-367 (429)
28 KOG1928 Alpha-1,4-N-acetylgluc 93.3 0.26 5.7E-06 52.5 7.7 185 165-354 105-319 (409)
29 PF05637 Glyco_transf_34: gala 91.2 0.15 3.3E-06 51.2 2.8 87 264-351 60-191 (239)
30 PLN03181 glycosyltransferase; 90.8 2.1 4.6E-05 46.4 11.0 97 264-363 182-325 (453)
31 cd02525 Succinoglycan_BP_ExoA 79.3 11 0.00023 36.0 8.7 85 205-296 15-103 (249)
32 PF00535 Glycos_transf_2: Glyc 79.2 9.4 0.0002 33.3 7.7 86 200-297 11-101 (169)
33 cd00761 Glyco_tranf_GTA_type G 76.7 18 0.00038 30.6 8.5 83 202-293 9-95 (156)
34 cd06423 CESA_like CESA_like is 75.9 18 0.0004 31.4 8.5 87 203-295 10-99 (180)
35 cd04186 GT_2_like_c Subfamily 75.2 27 0.00059 30.7 9.6 107 203-321 10-122 (166)
36 cd06439 CESA_like_1 CESA_like_ 74.8 21 0.00045 34.6 9.4 102 185-296 27-131 (251)
37 cd06437 CESA_CaSu_A2 Cellulose 74.2 14 0.00031 35.4 8.1 20 272-291 84-103 (232)
38 cd02515 Glyco_transf_6 Glycosy 72.9 27 0.00058 36.1 9.8 101 184-293 31-141 (271)
39 PRK15384 type III secretion sy 70.3 3.6 7.9E-05 41.7 2.8 47 276-322 216-265 (336)
40 PRK15383 type III secretion sy 70.1 3.5 7.6E-05 41.8 2.7 47 276-322 219-268 (335)
41 PRK15382 non-LEE encoded effec 69.9 3.9 8.5E-05 41.5 3.0 47 276-322 211-260 (326)
42 PF07801 DUF1647: Protein of u 69.5 26 0.00056 32.9 8.1 63 184-249 57-121 (142)
43 cd06433 GT_2_WfgS_like WfgS an 68.6 28 0.0006 31.7 8.3 85 203-296 11-97 (202)
44 cd04185 GT_2_like_b Subfamily 67.3 30 0.00064 32.2 8.3 86 205-295 12-100 (202)
45 PRK10063 putative glycosyl tra 65.0 64 0.0014 32.2 10.6 94 189-292 3-99 (248)
46 PRK11498 bcsA cellulose syntha 64.5 36 0.00078 40.6 9.9 83 215-306 287-375 (852)
47 cd04192 GT_2_like_e Subfamily 64.5 35 0.00076 32.0 8.3 20 272-291 79-98 (229)
48 cd02520 Glucosylceramide_synth 63.3 16 0.00034 34.4 5.7 108 205-320 16-133 (196)
49 PF03314 DUF273: Protein of un 62.2 23 0.00051 35.3 6.6 79 273-351 39-126 (222)
50 cd04195 GT2_AmsE_like GT2_AmsE 61.9 57 0.0012 30.2 9.1 81 204-291 14-96 (201)
51 cd06438 EpsO_like EpsO protein 61.2 54 0.0012 30.3 8.8 83 204-291 11-97 (183)
52 cd06427 CESA_like_2 CESA_like_ 60.6 49 0.0011 32.1 8.7 83 204-291 15-100 (241)
53 PRK11204 N-glycosyltransferase 60.4 40 0.00087 35.8 8.7 108 186-305 53-169 (420)
54 cd06421 CESA_CelA_like CESA_Ce 60.1 78 0.0017 29.9 9.9 81 205-291 17-100 (234)
55 COG0463 WcaA Glycosyltransfera 56.4 78 0.0017 27.2 8.5 84 201-291 14-98 (291)
56 cd02510 pp-GalNAc-T pp-GalNAc- 56.3 79 0.0017 31.9 9.7 87 203-297 12-106 (299)
57 cd02511 Beta4Glucosyltransfera 54.9 83 0.0018 30.5 9.3 73 205-291 15-87 (229)
58 cd04196 GT_2_like_d Subfamily 54.6 80 0.0017 29.2 8.8 88 205-298 13-103 (214)
59 cd02522 GT_2_like_a GT_2_like_ 54.3 69 0.0015 30.0 8.4 75 204-291 13-88 (221)
60 cd02514 GT13_GLCNAC-TI GT13_GL 54.1 94 0.002 33.1 10.0 100 194-296 6-118 (334)
61 PF04488 Gly_transf_sug: Glyco 53.8 7.2 0.00016 33.6 1.4 87 207-297 6-98 (103)
62 cd06434 GT2_HAS Hyaluronan syn 51.8 1.1E+02 0.0023 29.1 9.3 92 203-305 14-111 (235)
63 PF10111 Glyco_tranf_2_2: Glyc 50.9 45 0.00097 33.8 6.9 88 203-297 17-111 (281)
64 TIGR03469 HonB hopene-associat 50.4 1.1E+02 0.0025 32.4 10.1 103 186-296 39-155 (384)
65 cd06420 GT2_Chondriotin_Pol_N 49.9 57 0.0012 29.5 6.9 79 205-291 12-95 (182)
66 cd04184 GT2_RfbC_Mx_like Myxoc 48.3 1.3E+02 0.0028 27.6 9.1 23 269-291 77-99 (202)
67 COG0144 Sun tRNA and rRNA cyto 46.9 41 0.00089 35.8 6.1 63 79-145 229-307 (355)
68 cd06442 DPM1_like DPM1_like re 46.4 72 0.0016 29.9 7.2 84 205-296 12-100 (224)
69 TIGR03472 HpnI hopanoid biosyn 46.0 44 0.00095 35.4 6.1 21 271-291 122-142 (373)
70 cd06913 beta3GnTL1_like Beta 1 45.4 1.4E+02 0.0031 28.2 9.1 32 264-295 73-105 (219)
71 PRK14583 hmsR N-glycosyltransf 44.1 1E+02 0.0023 33.4 8.8 107 187-305 75-190 (444)
72 cd04179 DPM_DPG-synthase_like 43.9 76 0.0016 28.7 6.7 88 204-297 11-102 (185)
73 PRK10073 putative glycosyl tra 42.9 98 0.0021 32.3 8.1 96 188-296 7-107 (328)
74 cd06435 CESA_NdvC_like NdvC_li 41.3 1.4E+02 0.0031 28.4 8.4 17 275-291 84-100 (236)
75 TIGR03111 glyc2_xrt_Gpos1 puta 41.2 1E+02 0.0022 33.5 8.1 94 187-291 49-147 (439)
76 PF05704 Caps_synth: Capsular 40.3 45 0.00097 34.4 5.0 128 185-333 43-187 (276)
77 cd04191 Glucan_BSP_ModH Glucan 39.0 2.2E+02 0.0048 28.6 9.7 39 274-312 94-137 (254)
78 cd04187 DPM1_like_bac Bacteria 38.7 1.6E+02 0.0036 26.7 8.1 24 274-297 79-103 (181)
79 PRK13915 putative glucosyl-3-p 37.3 1.7E+02 0.0036 30.4 8.7 77 206-287 47-127 (306)
80 PRK10714 undecaprenyl phosphat 37.1 2.9E+02 0.0064 28.7 10.5 91 189-288 8-103 (325)
81 PF03414 Glyco_transf_6: Glyco 36.1 2.1E+02 0.0046 30.6 9.2 170 185-364 97-312 (337)
82 PF01793 Glyco_transf_15: Glyc 34.7 1.1E+02 0.0024 32.5 6.9 108 184-293 52-192 (328)
83 PF02485 Branch: Core-2/I-Bran 34.4 1.9E+02 0.0042 28.3 8.3 102 189-297 1-110 (244)
84 PRK11933 yebU rRNA (cytosine-C 34.2 68 0.0015 35.7 5.4 62 79-145 183-261 (470)
85 TIGR00446 nop2p NOL1/NOP2/sun 33.8 85 0.0018 31.7 5.8 19 79-97 140-158 (264)
86 PRK05454 glucosyltransferase M 33.5 3.5E+02 0.0076 31.7 11.2 114 186-305 123-255 (691)
87 PF03452 Anp1: Anp1; InterPro 33.0 3.6E+02 0.0079 27.9 10.1 44 184-230 22-67 (269)
88 PLN02726 dolichyl-phosphate be 32.6 2.9E+02 0.0062 26.8 9.1 25 272-296 90-115 (243)
89 PF13704 Glyco_tranf_2_4: Glyc 32.3 2.4E+02 0.0052 23.3 7.4 69 219-292 19-88 (97)
90 KOG1950 Glycosyl transferase, 28.9 21 0.00046 38.1 0.4 37 264-300 113-149 (369)
91 PLN00054 photosystem I reactio 27.8 36 0.00078 31.3 1.6 30 116-145 80-109 (139)
92 PRK10018 putative glycosyl tra 25.1 7E+02 0.015 25.5 10.7 28 270-297 80-108 (279)
93 cd02526 GT2_RfbF_like RfbF is 24.6 2.5E+02 0.0055 26.5 7.0 21 275-295 75-96 (237)
94 PRK14903 16S rRNA methyltransf 23.7 1.5E+02 0.0032 32.4 5.8 51 79-133 307-371 (431)
95 TIGR00563 rsmB ribosomal RNA s 23.2 1.5E+02 0.0033 32.1 5.7 62 77-144 307-386 (426)
96 PRK14901 16S rRNA methyltransf 22.8 1.6E+02 0.0034 32.1 5.8 65 78-145 324-403 (434)
97 COG1215 Glycosyltransferases, 22.2 1.9E+02 0.0041 30.5 6.2 69 217-291 83-153 (439)
98 PRK14904 16S rRNA methyltransf 20.2 2.1E+02 0.0046 31.3 6.1 18 78-95 317-334 (445)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=6e-46 Score=382.98 Aligned_cols=235 Identities=28% Similarity=0.514 Sum_probs=193.9
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCccccc---ccc
Q 043696 185 RARREAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERD---AYN 261 (521)
Q Consensus 185 ~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~---~~~ 261 (521)
..+++||||+|+++++|++||+||++||+++++.+++|||+++++++++++.|++.|+.++.|+.+..+..... .+.
T Consensus 19 ~~~~~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~~~lVvlVt~dVp~e~r~~L~~~g~~V~~V~~i~~~~~~~~~~~~~~ 98 (333)
T PLN00176 19 KPAKRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRRILVSQGCIVREIEPVYPPENQTQFAMAYY 98 (333)
T ss_pred ccCceEEEEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEecccCCcccccccccchh
Confidence 46789999999988999999999999999999999999999999999999999999999999988865433211 122
Q ss_pred hhhHHHHHHhccCCcceEEEeecCeeccCCchHhhcCCC--eeeecC---------------------------------
Q 043696 262 EWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPE--ITATGN--------------------------------- 306 (521)
Q Consensus 262 ~~ty~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF~~p~--iaAv~d--------------------------------- 306 (521)
..+|+||++|+|++||||||||+|+||++|||+||+++. ++|+.+
T Consensus 99 ~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g~ 178 (333)
T PLN00176 99 VINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGP 178 (333)
T ss_pred hhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEecccccccccccccccccccccchhhccchhhccC
Confidence 458999999999999999999999999999999999974 666543
Q ss_pred -CCCCccceEEEEecCHHHHHHHHHHHhhcCCCCCCchhHHHHhcc-cceecCCcccccccccCCChHHHHhhhhhcccC
Q 043696 307 -NATLFNSGVMVVEPSNCTFQLLMDHIYEIESYNGGDQGYLNEIFT-WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGA 384 (521)
Q Consensus 307 -~~~yFNSGVMVInPs~~~f~~L~e~l~~~~sy~~~DQdiLN~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~ 384 (521)
...|||||||||+|+..++++|++.+.....+.++|||+||.+|. +|++||.+||++........ +.+.
T Consensus 179 ~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~~~~--------~~~~- 249 (333)
T PLN00176 179 PPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLWRHP--------ENVE- 249 (333)
T ss_pred CCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHcCcEEECCchhcCchhhhhhCh--------hhcc-
Confidence 124999999999999999999999987665678899999999999 89999999999875422111 1232
Q ss_pred CCCCeEEEEecC--CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhH
Q 043696 385 DPPILYVLHYLG--NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMP 435 (521)
Q Consensus 385 ~~~~~~IIHY~G--~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p 435 (521)
.++++||||+| .|||+.. ...+|++.++. ...+++||++|++.-
T Consensus 250 -~~~vkIIHY~~~~~KPW~~~-~~~~~~~~~~~-----~~~~~~Ww~~~~~~~ 295 (333)
T PLN00176 250 -LDKVKVVHYCAAGSKPWRYT-GKEENMDREDI-----KMLVKKWWDIYNDES 295 (333)
T ss_pred -cCCcEEEEeeCCCCCCCCCC-CcccCCChHHH-----HHHHHHHHHHhcccc
Confidence 35799999995 7999854 44566654433 246899999998754
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=1.6e-40 Score=329.20 Aligned_cols=230 Identities=40% Similarity=0.720 Sum_probs=192.2
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCccc---ccccchhhH
Q 043696 189 EAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAE---RDAYNEWNY 265 (521)
Q Consensus 189 ~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~---~~~~~~~ty 265 (521)
.||||+++ +++|+++|.|+++||++++++++++|+++++++++.++.|++.+.+++.++.+..+... ...+...+|
T Consensus 1 ~ay~t~~~-~~~Y~~~a~vl~~SL~~~~~~~~~~vl~~~~is~~~~~~L~~~~~~~~~v~~i~~~~~~~~~~~~~~~~~~ 79 (240)
T cd02537 1 EAYVTLLT-NDDYLPGALVLGYSLRKVGSSYDLVVLVTPGVSEESREALEEVGWIVREVEPIDPPDSANLLKRPRFKDTY 79 (240)
T ss_pred CEEEEEec-ChhHHHHHHHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHHcCCEEEecCccCCcchhhhccchHHHHHh
Confidence 49999987 56999999999999999999999999999999999999999999999988887655332 123344589
Q ss_pred HHHHHhccCCcceEEEeecCeeccCCchHhhcCC-CeeeecCCC--CCccceEEEEecCHHHHHHHHHHHhhcCCCCCCc
Q 043696 266 SKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMP-EITATGNNA--TLFNSGVMVVEPSNCTFQLLMDHIYEIESYNGGD 342 (521)
Q Consensus 266 ~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF~~p-~iaAv~d~~--~yFNSGVMVInPs~~~f~~L~e~l~~~~sy~~~D 342 (521)
+||++|++++||||||||+|+||++||++||+++ .++|+.+.. .|||||||+|+|+...++++++.+.+...+.++|
T Consensus 80 ~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~D 159 (240)
T cd02537 80 TKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPDCGWPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGD 159 (240)
T ss_pred HHHHhccccccceEEEEeCCeeEccCHHHHhCCCCceeeecccCccccccceEEEEcCCHHHHHHHHHHHhccCCCCCCC
Confidence 9999999999999999999999999999999994 588887753 7999999999999999999999998766688899
Q ss_pred hhHHHHhcc-c--ceecCCcccccccccCCChHHHHhhhhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCcccccchhc
Q 043696 343 QGYLNEIFT-W--WHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNWNVDILQEF 418 (521)
Q Consensus 343 QdiLN~vF~-~--w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nwn~~~~~~~ 418 (521)
|++||.+|. + |..||.+||++......... .. ...++++||||+| .|||+....+.+++ ..
T Consensus 160 QdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~-------~~--~~~~~~~iiHf~g~~KPW~~~~~~~~~~------~~ 224 (240)
T cd02537 160 QGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPE-------AL--WFGDEIKVVHFIGGDKPWSWWRDPETKE------KD 224 (240)
T ss_pred HHHHHHHHcCCCCEeECCcceeeehhhhccCch-------hh--cccCCcEEEEEeCCCCCCCCCcCCCccc------cc
Confidence 999999998 7 99999999998765322111 01 1235799999999 99999877655432 23
Q ss_pred cchhHHhHHHHHHhhh
Q 043696 419 ASDIAHKTWWKVHDAM 434 (521)
Q Consensus 419 ~~d~~~~~WW~vyd~~ 434 (521)
..+..+..||++|++|
T Consensus 225 ~~~~~~~~w~~~~~~~ 240 (240)
T cd02537 225 DYNELHQWWWDIYDEL 240 (240)
T ss_pred chHHHHHHHHHHHhhC
Confidence 4567899999999875
No 3
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=100.00 E-value=1.9e-36 Score=306.00 Aligned_cols=242 Identities=24% Similarity=0.269 Sum_probs=176.1
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHH-------HHHcCceEEEEeeecCCcccccccc
Q 043696 189 EAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDYHRGG-------LEAAGWKIHTIQRIRNPKAERDAYN 261 (521)
Q Consensus 189 ~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~-------Lk~~g~~v~~V~~I~~p~~~~~~~~ 261 (521)
+||||++| +++|+|||++|++||+++++++++|+|++++++...... +.+.++.+..|+.+..+.. ...+
T Consensus 1 fAYvtl~T-n~~YL~gAlvL~~sLr~~gs~~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~~-~~~~- 77 (278)
T cd06914 1 YAYVNYAT-NADYLCNALILFEQLRRLGSKAKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASGG-DAYW- 77 (278)
T ss_pred CeEEEEec-ChhHHHHHHHHHHHHHHhCCCCCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCCC-CccH-
Confidence 59999998 679999999999999999999999999999998754332 3345676766665544431 1112
Q ss_pred hhhHHHHHHhccCCcceEEEeecCeeccCCchHhhcCC-C-eeeecCCCCCccceEEEEecCHHHHHHHHHHHhhcCC--
Q 043696 262 EWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMP-E-ITATGNNATLFNSGVMVVEPSNCTFQLLMDHIYEIES-- 337 (521)
Q Consensus 262 ~~ty~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF~~p-~-iaAv~d~~~yFNSGVMVInPs~~~f~~L~e~l~~~~s-- 337 (521)
..+|+||++|++++||||||||||+||++|||+||+++ . ..|+++...|||||||||+|+.++|++|++.+.+..+
T Consensus 78 ~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~ 157 (278)
T cd06914 78 AKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYWKFASHLMVIKPSKEAFKELMTEILPAYLNK 157 (278)
T ss_pred HHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeecCcceecceeEEEeCCHHHHHHHHHHHHHhcccC
Confidence 23699999999999999999999999999999999998 2 2344544569999999999999999999999876433
Q ss_pred CCCCchhHHHHhcc-c-------ceecCCc-ccccccccCCChHHHHh----hhhhcccCC--CCCeEEEEecC---CCC
Q 043696 338 YNGGDQGYLNEIFT-W-------WHRIPKH-MNFLKHFWEGDEEEKKH----MKIRLFGAD--PPILYVLHYLG---NKP 399 (521)
Q Consensus 338 y~~~DQdiLN~vF~-~-------w~~LP~~-YN~l~~~~~~~~~~~~~----~k~~~f~~~--~~~~~IIHY~G---~KP 399 (521)
..++|||+||.+|. + +..||.+ ||++.+.+......... ...+.|+.+ .++.++|||++ .||
T Consensus 158 ~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KP 237 (278)
T cd06914 158 KNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKP 237 (278)
T ss_pred CCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhcccCHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCC
Confidence 35789999999998 7 8899986 99998744332221100 112334322 36899999998 699
Q ss_pred CCCCCC-------CCCCcccccchhccchhHHhHHHHHHhhh
Q 043696 400 WLCFRD-------YDCNWNVDILQEFASDIAHKTWWKVHDAM 434 (521)
Q Consensus 400 W~~~~~-------~d~nwn~~~~~~~~~d~~~~~WW~vyd~~ 434 (521)
|..... ..|-- ...-+.-.++...+.|+..|+++
T Consensus 238 W~~~~~~~~~~~~~~~~~-~~~~~~~~~c~~~~iW~~~y~~f 278 (278)
T cd06914 238 WNYNNLEDIYCIEKIYCK-MVKPRLEDDCRACDLWNSLYADF 278 (278)
T ss_pred cCCcCHHHHHHhCCcccc-CCCCCccCcchHHHHHHHHhhcC
Confidence 987532 11100 00001112345688999998763
No 4
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.98 E-value=6.2e-32 Score=267.86 Aligned_cols=202 Identities=28% Similarity=0.429 Sum_probs=148.5
Q ss_pred EEEEEeecChhhHHHHHHHHHHHHHhCCC-CcEEEEECCCCCHHHHHHHHHcC------ceEEEEeeecCCccc--cccc
Q 043696 190 AYATILHSAHVYVCGAIAAAQSIRMAGST-RDLVILVDETISDYHRGGLEAAG------WKIHTIQRIRNPKAE--RDAY 260 (521)
Q Consensus 190 AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~-~dlvVLvtd~Is~e~~~~Lk~~g------~~v~~V~~I~~p~~~--~~~~ 260 (521)
++||+ ++|++|++++.|+++||++++++ ..++| +++++|++.++.|++.. +++++++........ ...+
T Consensus 2 ~i~~~-a~d~~y~~~~~v~i~Sl~~~~~~~~~~~i-l~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 79 (246)
T cd00505 2 AIVIV-ATGDEYLRGAIVLMKSVLRHRTKPLRFHV-LTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPI 79 (246)
T ss_pred eEEEE-ecCcchhHHHHHHHHHHHHhCCCCeEEEE-EEccccHHHHHHHHHHHhccCceEEEEeccccCcchhhhhcCcc
Confidence 56765 45679999999999999999875 33444 45789999999987742 233333321111000 1234
Q ss_pred chhhHHHHHHhccCC-cceEEEeecCeeccCCchHhhcCC----CeeeecC------------------CCCCccceEEE
Q 043696 261 NEWNYSKFRLWQLTD-YDKIIFIDADLLILRNIDFLFEMP----EITATGN------------------NATLFNSGVMV 317 (521)
Q Consensus 261 ~~~ty~KL~lw~L~e-YDRVLYLDaD~LVl~nLDeLF~~p----~iaAv~d------------------~~~yFNSGVMV 317 (521)
+..+|+||+++++.+ |+||||||+|+||++||++||+++ .++|+++ ...||||||||
T Consensus 80 ~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVml 159 (246)
T cd00505 80 KIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVFV 159 (246)
T ss_pred ccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhccchhhcccCCCCCCCceeeeeEE
Confidence 456899999999855 999999999999999999999987 2666654 13599999999
Q ss_pred EecCHHHHHHHHHHHhh-----cCCCCCCchhHHHHhcc-c---ceecCCcccccccccCCChHHHHhhhhhcccCCCCC
Q 043696 318 VEPSNCTFQLLMDHIYE-----IESYNGGDQGYLNEIFT-W---WHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPI 388 (521)
Q Consensus 318 InPs~~~f~~L~e~l~~-----~~sy~~~DQdiLN~vF~-~---w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~ 388 (521)
||++.++++++++...+ ..++.++|||+||.+|. + +..||.+||++........ +.+.....+
T Consensus 160 inl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~~--------~~~~~~~~~ 231 (246)
T cd00505 160 VNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRSL--------NCFKAFVKN 231 (246)
T ss_pred EechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCCCeEEECCCeeeEEecCccccc--------cchhhhcCC
Confidence 99999988777664322 34577899999999998 5 9999999999875422110 111223458
Q ss_pred eEEEEecC-CCCCC
Q 043696 389 LYVLHYLG-NKPWL 401 (521)
Q Consensus 389 ~~IIHY~G-~KPW~ 401 (521)
++||||+| .|||+
T Consensus 232 ~~iiHy~g~~KPW~ 245 (246)
T cd00505 232 AKVIHFNGPTKPWN 245 (246)
T ss_pred CEEEEeCCCCCCCC
Confidence 99999999 89996
No 5
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.97 E-value=1.1e-30 Score=258.32 Aligned_cols=203 Identities=25% Similarity=0.384 Sum_probs=147.2
Q ss_pred eecChhhHHHHHHHHHHHHHhCCC--CcEEEEECCCCCHHHHHHHHHc----CceEEEEeeecCCcc-----cccccchh
Q 043696 195 LHSAHVYVCGAIAAAQSIRMAGST--RDLVILVDETISDYHRGGLEAA----GWKIHTIQRIRNPKA-----ERDAYNEW 263 (521)
Q Consensus 195 Lt~dd~Yl~gA~VL~~SLr~~ns~--~dlvVLvtd~Is~e~~~~Lk~~----g~~v~~V~~I~~p~~-----~~~~~~~~ 263 (521)
++.|++|+.++.|++.||+++++. ++++|+ +++++++.++.|++. +..+..+. +..+.. ....++..
T Consensus 5 ~~~d~~y~~~~~~~l~Sl~~~~~~~~~~~~il-~~~is~~~~~~L~~~~~~~~~~i~~~~-i~~~~~~~~~~~~~~~~~~ 82 (248)
T cd04194 5 FAIDDNYAPYLAVTIKSILANNSKRDYDFYIL-NDDISEENKKKLKELLKKYNSSIEFIK-IDNDDFKFFPATTDHISYA 82 (248)
T ss_pred EEecHhhHHHHHHHHHHHHhcCCCCceEEEEE-eCCCCHHHHHHHHHHHHhcCCeEEEEE-cCHHHHhcCCcccccccHH
Confidence 345889999999999999999884 455555 467999999999886 34443222 222211 12334456
Q ss_pred hHHHHHHhccC-CcceEEEeecCeeccCCchHhhcCC----CeeeecC-----------------CCCCccceEEEEecC
Q 043696 264 NYSKFRLWQLT-DYDKIIFIDADLLILRNIDFLFEMP----EITATGN-----------------NATLFNSGVMVVEPS 321 (521)
Q Consensus 264 ty~KL~lw~L~-eYDRVLYLDaD~LVl~nLDeLF~~p----~iaAv~d-----------------~~~yFNSGVMVInPs 321 (521)
+|.||+++++. +|+||||||+|+||++||++||+++ .++|+.| ...||||||||++++
T Consensus 83 ~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~l~nl~ 162 (248)
T cd04194 83 TYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVLLINLK 162 (248)
T ss_pred HHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHHHHhhcCCCcccceeeecchheeHH
Confidence 89999999975 5999999999999999999999986 2666654 247999999999998
Q ss_pred HHHHH----HHHHHHhhc-CCCCCCchhHHHHhcc-cceecCCcccccccccCCChHHHHhhhhhcccCCCCCeEEEEec
Q 043696 322 NCTFQ----LLMDHIYEI-ESYNGGDQGYLNEIFT-WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHYL 395 (521)
Q Consensus 322 ~~~f~----~L~e~l~~~-~sy~~~DQdiLN~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~ 395 (521)
.++.+ ++++.+.+. ..+.++|||+||.+|. +|+.||.+||++.......... .. ..+.+....++++||||+
T Consensus 163 ~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~-~~-~~~~~~~~~~~~~iiHf~ 240 (248)
T cd04194 163 KWREENITEKLLELIKEYGGRLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKK-SK-EEQELEEARKNPVIIHYT 240 (248)
T ss_pred HHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhcc-ch-hHHHHHHHhcCCEEEEeC
Confidence 76544 455555543 3467899999999999 8999999999987642211000 00 001122235689999999
Q ss_pred C-CCCCC
Q 043696 396 G-NKPWL 401 (521)
Q Consensus 396 G-~KPW~ 401 (521)
| .|||+
T Consensus 241 g~~KPW~ 247 (248)
T cd04194 241 GSDKPWN 247 (248)
T ss_pred CCCCCCC
Confidence 9 99997
No 6
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.97 E-value=7e-31 Score=254.75 Aligned_cols=201 Identities=25% Similarity=0.426 Sum_probs=142.0
Q ss_pred eecChhhHHHHHHHHHHHHHhCCC-CcEE-EEECCCCCHHHHHHHHHcCceEEEEeeecCCcc-----------cccccc
Q 043696 195 LHSAHVYVCGAIAAAQSIRMAGST-RDLV-ILVDETISDYHRGGLEAAGWKIHTIQRIRNPKA-----------ERDAYN 261 (521)
Q Consensus 195 Lt~dd~Yl~gA~VL~~SLr~~ns~-~dlv-VLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~-----------~~~~~~ 261 (521)
++.|++|+.+++|+++||++++++ ..++ ++++++++++.++.|++.+.++..+..+..+.. ....+.
T Consensus 4 ~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (250)
T PF01501_consen 4 LACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFS 83 (250)
T ss_dssp EECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGG
T ss_pred EEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhccccccccc
Confidence 455789999999999999999986 5654 467889999999999988776543322211110 112233
Q ss_pred hhhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC--------------------CCCCccceEE
Q 043696 262 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN--------------------NATLFNSGVM 316 (521)
Q Consensus 262 ~~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d--------------------~~~yFNSGVM 316 (521)
..+|.||+++++ ++||||||||+|+||++||++||+++. ++|+.+ ...+||||||
T Consensus 84 ~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsGv~ 163 (250)
T PF01501_consen 84 PATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSGVM 163 (250)
T ss_dssp GGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEEEE
T ss_pred HHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccchhhhccccccchhhhhhhcccchhhcccCcccccccCcEE
Confidence 468999999998 999999999999999999999999752 555533 4689999999
Q ss_pred EEecCHHHHHHHHHHHhh----c-CCCCCCchhHHHHhcc-cceecCCcccccccccCCChHHHHhhhhhcccCCCCCeE
Q 043696 317 VVEPSNCTFQLLMDHIYE----I-ESYNGGDQGYLNEIFT-WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILY 390 (521)
Q Consensus 317 VInPs~~~f~~L~e~l~~----~-~sy~~~DQdiLN~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~ 390 (521)
+++++..+++.+.+.+.+ . ..+.++||++||.+|. .+..||.+||++........ ..+....++++
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~~~~~--------~~~~~~~~~~~ 235 (250)
T PF01501_consen 164 LFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFYGNIKPLPCRYNCQPSWYNQSD--------DYFNPILEDAK 235 (250)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHHHHTH--------HHHHHHGCC-S
T ss_pred EEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhccceeEEECchhccccccccccc--------hhhHhhcCCeE
Confidence 999998888777665432 2 2467899999999999 99999999999876530000 00111135789
Q ss_pred EEEecC-CCCCCCC
Q 043696 391 VLHYLG-NKPWLCF 403 (521)
Q Consensus 391 IIHY~G-~KPW~~~ 403 (521)
||||+| .|||...
T Consensus 236 iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 236 IIHYSGPPKPWKST 249 (250)
T ss_dssp EEE--SSS-TTSTT
T ss_pred EEEeCCCCcCCCCC
Confidence 999999 9999863
No 7
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=263.18 Aligned_cols=221 Identities=21% Similarity=0.297 Sum_probs=157.2
Q ss_pred EEeecChhhHHHHHHHHHHHHHhCCCCcEEE-EECCCCCHHHHHHHHHc----CceEEEEeeecCC--c--ccccccchh
Q 043696 193 TILHSAHVYVCGAIAAAQSIRMAGSTRDLVI-LVDETISDYHRGGLEAA----GWKIHTIQRIRNP--K--AERDAYNEW 263 (521)
Q Consensus 193 TlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvV-Lvtd~Is~e~~~~Lk~~----g~~v~~V~~I~~p--~--~~~~~~~~~ 263 (521)
.+++.|++|+.++.|++.||..++++.++.+ ++++++|++.++.|++. +.++..+ .++.. . .....++..
T Consensus 28 Iv~~~D~ny~~~~~vsi~Sil~nn~~~~~~f~Il~~~is~e~~~~l~~l~~~~~~~i~~~-~id~~~~~~~~~~~~~s~a 106 (334)
T PRK15171 28 IAYGIDKNFLFGCGVSIASVLLNNPDKSLVFHVFTDYISDADKQRFSALAKQYNTRINIY-LINCERLKSLPSTKNWTYA 106 (334)
T ss_pred EEEECcHhhHHHHHHHHHHHHHhCCCCCEEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEE-EeCHHHHhCCcccCcCCHH
Confidence 3356689999999999999999987755433 44579999998877654 4443322 12110 0 012345567
Q ss_pred hHHHHHHhcc-C-CcceEEEeecCeeccCCchHhhcCC----Ceeeec-C------------------CCCCccceEEEE
Q 043696 264 NYSKFRLWQL-T-DYDKIIFIDADLLILRNIDFLFEMP----EITATG-N------------------NATLFNSGVMVV 318 (521)
Q Consensus 264 ty~KL~lw~L-~-eYDRVLYLDaD~LVl~nLDeLF~~p----~iaAv~-d------------------~~~yFNSGVMVI 318 (521)
+|+||+++++ . ++|||||||+|+||.+||++||+++ .++|+. + ...|||||||||
T Consensus 107 tY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVlli 186 (334)
T PRK15171 107 TYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAEWWSKRAQSLQTPGLASGYFNSGFLLI 186 (334)
T ss_pred HHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchhHHHHHHHhcCCccccccceecceEEE
Confidence 8999999997 3 6999999999999999999999986 266652 1 125999999999
Q ss_pred ecCHHHHHH----HHHHHhhc---CCCCCCchhHHHHhcc-cceecCCcccccccccCCChHHHHhhhhhcccCCCCCeE
Q 043696 319 EPSNCTFQL----LMDHIYEI---ESYNGGDQGYLNEIFT-WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILY 390 (521)
Q Consensus 319 nPs~~~f~~----L~e~l~~~---~sy~~~DQdiLN~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~ 390 (521)
|++.++.+. +++.+.+. ..+.++|||+||.+|. +|..||.+||++.+... ..+ .........+++
T Consensus 187 Nl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~----~~~---~~~~~~~~~~p~ 259 (334)
T PRK15171 187 NIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNY----ELK---DSVINPVNDETV 259 (334)
T ss_pred cHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhH----HHH---hcccccccCCCE
Confidence 998776554 44555432 3567899999999998 89999999998764311 000 011111235789
Q ss_pred EEEecC-CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhHH
Q 043696 391 VLHYLG-NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMPE 436 (521)
Q Consensus 391 IIHY~G-~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p~ 436 (521)
||||+| .|||+....+ ...+.||+++...|-
T Consensus 260 IIHy~G~~KPW~~~~~~---------------~~~~~f~~~~~~spw 291 (334)
T PRK15171 260 FIHYIGPTKPWHSWADY---------------PVSQYFLKAKEASPW 291 (334)
T ss_pred EEEECCCCCCCCCCCCC---------------chHHHHHHHHhcCCC
Confidence 999999 9999864322 125899999998773
No 8
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.95 E-value=2.4e-27 Score=238.02 Aligned_cols=204 Identities=17% Similarity=0.153 Sum_probs=141.0
Q ss_pred hhHHHHHHHHHHHHHhCCC-CcEEE-EECCCCCHHHHHHHHHc----Cce--EEEEeeec---CCc--c-----------
Q 043696 200 VYVCGAIAAAQSIRMAGST-RDLVI-LVDETISDYHRGGLEAA----GWK--IHTIQRIR---NPK--A----------- 255 (521)
Q Consensus 200 ~Yl~gA~VL~~SLr~~ns~-~dlvV-Lvtd~Is~e~~~~Lk~~----g~~--v~~V~~I~---~p~--~----------- 255 (521)
+|+. +.|.+.|+..++++ .++++ +++++++.+..+.+.+. +.+ ++.++... ... .
T Consensus 9 n~l~-~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 87 (257)
T cd06429 9 NRLA-AAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLMQLESEADTS 87 (257)
T ss_pred chhH-HHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhhhhhcccccc
Confidence 8995 55555566666655 67665 67889998887777543 333 33332110 000 0
Q ss_pred -----cccccchhhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecCCCCCccceEEEEecCHHHH
Q 043696 256 -----ERDAYNEWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGNNATLFNSGVMVVEPSNCTF 325 (521)
Q Consensus 256 -----~~~~~~~~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d~~~yFNSGVMVInPs~~~f 325 (521)
....++..+|+||.++++ ++++||||||+|+||++||++||+++. ++|+.| ||||||||||++.++.
T Consensus 88 ~~~~~~~~~~s~~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d---yfNsGV~linl~~wr~ 164 (257)
T cd06429 88 NLKQRKPEYISLLNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET---SWNPGVNVVNLTEWRR 164 (257)
T ss_pred ccccCCccccCHHHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---hcccceEEEeHHHHHh
Confidence 112344568999999996 679999999999999999999999872 667766 9999999999987765
Q ss_pred HHH----HHHHhhc--C---CCCCCchhHHHHhcc-cceecCCcccccccccCCChHHHHhhhhhcccCCCCCeEEEEec
Q 043696 326 QLL----MDHIYEI--E---SYNGGDQGYLNEIFT-WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHYL 395 (521)
Q Consensus 326 ~~L----~e~l~~~--~---sy~~~DQdiLN~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~ 395 (521)
+.+ ++.+.+. . .+.++||++||.+|. ++..||.+||++...+.... . .....+++||||+
T Consensus 165 ~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~wN~~~l~~~~~~------~----~~~~~~~~IIHy~ 234 (257)
T cd06429 165 QNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPSWHVRGLGYNYGI------R----PQDIKAAAVLHFN 234 (257)
T ss_pred ccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChHHcccCCcccccc------c----ccccCCcEEEEEC
Confidence 544 4444322 1 246789999999998 99999999998732211100 0 1123579999999
Q ss_pred C-CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHh
Q 043696 396 G-NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHD 432 (521)
Q Consensus 396 G-~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd 432 (521)
| .|||+....+ ...+.||++++
T Consensus 235 G~~KPW~~~~~~---------------~~~~~w~~yl~ 257 (257)
T cd06429 235 GNMKPWLRTAIP---------------SYKELWEKYLS 257 (257)
T ss_pred CCCCCcCCCCCC---------------hHHHHHHHHhC
Confidence 9 9999875321 23689999863
No 9
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.95 E-value=1.7e-27 Score=245.42 Aligned_cols=201 Identities=20% Similarity=0.274 Sum_probs=150.7
Q ss_pred eecChhhHHHHHHHHHHHHHhCC--CCcEEEEECCCCCHHHHHHHHHc----CceEE--EE--eeec-CCcccccccchh
Q 043696 195 LHSAHVYVCGAIAAAQSIRMAGS--TRDLVILVDETISDYHRGGLEAA----GWKIH--TI--QRIR-NPKAERDAYNEW 263 (521)
Q Consensus 195 Lt~dd~Yl~gA~VL~~SLr~~ns--~~dlvVLvtd~Is~e~~~~Lk~~----g~~v~--~V--~~I~-~p~~~~~~~~~~ 263 (521)
++.|++|+.||.|+++||..|+. .+.+++++ +++++++.+.|++. +..+. .+ +.+. .|. ....++..
T Consensus 7 ~a~D~nY~~~~gvsI~SiL~~n~~~~~~fhil~-~~i~~e~~~~l~~~~~~f~~~i~~~~id~~~~~~~~~-~~~~~s~~ 84 (325)
T COG1442 7 FAFDKNYLIPAGVSIYSLLEHNRKIFYKFHILV-DGLNEEDKKKLNETAEPFKSFIVLEVIDIEPFLDYPP-FTKRFSKM 84 (325)
T ss_pred EEcccccchhHHHHHHHHHHhCccccEEEEEEe-cCCCHHHHHHHHHHHHhhccceeeEEEechhhhcccc-cccchHHH
Confidence 34589999999999999999998 77888876 58999998887764 33332 12 1111 110 12345567
Q ss_pred hHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC------------------CCCCccceEEEEec
Q 043696 264 NYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN------------------NATLFNSGVMVVEP 320 (521)
Q Consensus 264 ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d------------------~~~yFNSGVMVInP 320 (521)
+|.|+++.++ ++|||+||||+|+||+++|++||.++. ++||.| .+.|||||||++|.
T Consensus 85 v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~~~~~~~~~~~~~~~~yFNaG~llinl 164 (325)
T COG1442 85 VLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSYFNAGVLLINL 164 (325)
T ss_pred HHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhhhhhhhHhhhcccccccCccceeeehH
Confidence 8999999997 789999999999999999999999872 666644 46899999999999
Q ss_pred CHHHHHHHHH----HHhh-cCCCCCCchhHHHHhcc-cceecCCcccccccccCCChHHHHhhhhhcccCCCCCeEEEEe
Q 043696 321 SNCTFQLLMD----HIYE-IESYNGGDQGYLNEIFT-WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHY 394 (521)
Q Consensus 321 s~~~f~~L~e----~l~~-~~sy~~~DQdiLN~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY 394 (521)
..++.+.+.+ .+.+ ...+..+|||+||.+|. +|..||.+||++.++...... + .......++.|+||
T Consensus 165 ~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~-----~--~~~~~~~~~~iiHy 237 (325)
T COG1442 165 KLWREENIFEKLIELLKDKENDLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKD-----K--YIYPFGDDPVILHY 237 (325)
T ss_pred HHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHhhhhccCcccceeehhhhccch-----h--hhccCCCCceEEEe
Confidence 8776665544 4433 34678899999999999 999999999999765321111 0 00112357899999
Q ss_pred cC-CCCCCCCC
Q 043696 395 LG-NKPWLCFR 404 (521)
Q Consensus 395 ~G-~KPW~~~~ 404 (521)
+| .|||+...
T Consensus 238 ~g~~KPW~~~~ 248 (325)
T COG1442 238 AGPTKPWHSDS 248 (325)
T ss_pred cCCCCCCcCcc
Confidence 99 69999865
No 10
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.95 E-value=8.9e-27 Score=236.63 Aligned_cols=201 Identities=15% Similarity=0.155 Sum_probs=138.2
Q ss_pred EEEEEeecChhhHHHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHc----CceEEEEee--ecCCcc--ccccc
Q 043696 190 AYATILHSAHVYVCGAIAAAQSIRMAGS-TRDLVILVDETISDYHRGGLEAA----GWKIHTIQR--IRNPKA--ERDAY 260 (521)
Q Consensus 190 AyVTlLt~dd~Yl~gA~VL~~SLr~~ns-~~dlvVLvtd~Is~e~~~~Lk~~----g~~v~~V~~--I~~p~~--~~~~~ 260 (521)
|+| ++. ++|+.++.|++.||..++. ...++| ++++++++..+.|.+. +.++..+.. ...... ...++
T Consensus 4 ~iv--~~~-~~y~~~~~~~i~Sil~n~~~~~~fhi-i~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~~~~~~~~~~~~~~ 79 (280)
T cd06431 4 AIV--CAG-YNASRDVVTLVKSVLFYRRNPLHFHL-ITDEIARRILATLFQTWMVPAVEVSFYNAEELKSRVSWIPNKHY 79 (280)
T ss_pred EEE--Ecc-CCcHHHHHHHHHHHHHcCCCCEEEEE-EECCcCHHHHHHHHHhccccCcEEEEEEhHHhhhhhccCcccch
Confidence 444 344 7999999999999999863 234444 5578999998888644 444433321 011100 11233
Q ss_pred chh-hHHHHHHhcc-C-CcceEEEeecCeeccCCchHhhcC--C----Ceee-ecC------------------CCCCcc
Q 043696 261 NEW-NYSKFRLWQL-T-DYDKIIFIDADLLILRNIDFLFEM--P----EITA-TGN------------------NATLFN 312 (521)
Q Consensus 261 ~~~-ty~KL~lw~L-~-eYDRVLYLDaD~LVl~nLDeLF~~--p----~iaA-v~d------------------~~~yFN 312 (521)
+.. +|.||+++++ + ++|||||||+|+||.+||++||++ + .++| +.+ .+.|||
T Consensus 80 s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFN 159 (280)
T cd06431 80 SGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFN 159 (280)
T ss_pred hhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCccccccee
Confidence 333 6799999997 4 599999999999999999999987 2 1333 322 024999
Q ss_pred ceEEEEecCHHHHHHHHHHH----hh----cCCCCCCchhHHHHhcc-c---ceecCCcccccccccCCChHHHHhhhhh
Q 043696 313 SGVMVVEPSNCTFQLLMDHI----YE----IESYNGGDQGYLNEIFT-W---WHRIPKHMNFLKHFWEGDEEEKKHMKIR 380 (521)
Q Consensus 313 SGVMVInPs~~~f~~L~e~l----~~----~~sy~~~DQdiLN~vF~-~---w~~LP~~YN~l~~~~~~~~~~~~~~k~~ 380 (521)
||||+||.+.++.+.+.+.+ .+ ...+.++|||+||.+|. + ++.||.+||++.+..... .+
T Consensus 160 sGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~~~~~~~--------~~ 231 (280)
T cd06431 160 TGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQLSDHTRS--------EQ 231 (280)
T ss_pred eeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCccccccCccchH--------hH
Confidence 99999999877655554432 22 23567899999999998 6 789999999986432110 11
Q ss_pred cccCCCCCeEEEEecC-CCCCCCC
Q 043696 381 LFGADPPILYVLHYLG-NKPWLCF 403 (521)
Q Consensus 381 ~f~~~~~~~~IIHY~G-~KPW~~~ 403 (521)
.+. ...+|+||||+| .|||...
T Consensus 232 ~~~-~~~~p~IIHf~g~~KPW~~~ 254 (280)
T cd06431 232 CYR-DVSDLKVIHWNSPKKLRVKN 254 (280)
T ss_pred hhc-CcCCCEEEEeCCCCCCCCcC
Confidence 122 246799999999 9999854
No 11
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.8e-28 Score=255.24 Aligned_cols=353 Identities=37% Similarity=0.516 Sum_probs=288.4
Q ss_pred EeecccCCcccccchhhhhccCCeeeeccchHHHHhhcccCCccccccc--cccccccc----cCCCCCCEEEEEEeecC
Q 043696 125 LVTECFPIPNLFTCKDIVVREGNAWLYKPDLHRLREKLLLPVGSCELAV--PLKAKENF----YSERARREAYATILHSA 198 (521)
Q Consensus 125 ~~~~c~p~~~~f~c~~~~~~~~~~~~y~~~~~~l~~~~~~pvgs~~~a~--p~~~~~~~----~~~~~~r~AyVTlLt~d 198 (521)
+.+.|+++..++.|+.++.++++.|+|++.+...++++.++|++|.+.. ...+.... ......+.++++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 86 (369)
T KOG1950|consen 7 EATSLLPVDLLLTIDKLVLNEGDLLLYKTLFLFDDQALVDLVTSLDLLGLLKIGSPLKGVRTTLKLVPKREAYVSLLASR 86 (369)
T ss_pred ccccccccccchhhhHHHhcccceEEeecceeeehhhhhccccchhhhcccccchhhhhhhhhccCCccchhheeeecce
Confidence 6788999999999999999999999999999999999999999999863 22222111 12246689999999888
Q ss_pred hhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcce
Q 043696 199 HVYVCGAIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDK 278 (521)
Q Consensus 199 d~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDR 278 (521)
-.|.+...|..++++...+..+++++..+.+.........+.++.+..|+.+.++....+..+.+.|.++..|.+..+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 166 (369)
T KOG1950|consen 87 VLFKDLDIVIPQSIKSKYSSADLVLLRDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPNELNYAKLYMFQLDFYSK 166 (369)
T ss_pred eEEEeeeeccCccccccccceeEEeecccceeecceeccCceEEEecchhhccCccccccccchhcccccceeeeccccc
Confidence 88888999999999988888888877544444333222333334444445555555445566677899999999999999
Q ss_pred EEEeecCeeccCCchHhhc-CCCeeeecCCCCCccceEEEEecCHHHHHHHHHHHhhcCCCCCCchhHHHHhcccce-ec
Q 043696 279 IIFIDADLLILRNIDFLFE-MPEITATGNNATLFNSGVMVVEPSNCTFQLLMDHIYEIESYNGGDQGYLNEIFTWWH-RI 356 (521)
Q Consensus 279 VLYLDaD~LVl~nLDeLF~-~p~iaAv~d~~~yFNSGVMVInPs~~~f~~L~e~l~~~~sy~~~DQdiLN~vF~~w~-~L 356 (521)
.+.+|+|..++.+.+.+|. ++.+++++....+||+|.|++.|+.+.++.+++......++.++|||++|.+|.++. +.
T Consensus 167 ~~~~d~~~~~~~~~~~~f~~~~~~~~~~~l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~ 246 (369)
T KOG1950|consen 167 LVKIDADDCILKNDDLLFSNWPDLFATNILPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNGADQGFLHLIFSWIPDRP 246 (369)
T ss_pred ceEEeccchhcCChhhhhhhchhhccCCCccceeccCccccCCCccchhhHHHhhcccCCCCCccchhhHHHhhcccCCC
Confidence 9999999999999999999 788999988888899999999999999999999888888999999999999999776 88
Q ss_pred CCcccccccccCCChHHHHhhhhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhH
Q 043696 357 PKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMP 435 (521)
Q Consensus 357 P~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p 435 (521)
|..+|+....+.+... +...++......+.+||.| .|||.++++++||++....+.+..+..++.||.+|++++
T Consensus 247 ~~~~n~~~~~~~~~p~-----~~~l~~~~~~~~~~~~y~~~~~p~~~~~~~~~n~~~~~~~~~~~~~~~~~~w~~~~~~~ 321 (369)
T KOG1950|consen 247 PPSVNLNLAKLWRHPK-----KNDLSRASSVLRYALHYLGANKPELCYRDFDCNLDGDEFPRKDIDSLHKKWWDVYDDMS 321 (369)
T ss_pred cccccccccccccCcc-----ccchhhcccccchhhhccccCCCCccccCcccccccccccchhHHHHHhccchhhccCc
Confidence 9999998776443221 1233344445667789999 599999999999998666666777888999999999999
Q ss_pred HHHHHHhhhhhhhhhhhHHHHHHhhHcCCCCCceeEEeecccccccc
Q 043696 436 EHLQKFCLLRSKQKAALEWDRRQAEKANYTDGHWKIKIQDKRLKTCF 482 (521)
Q Consensus 436 ~~l~~~c~l~~~~~~~~~~~r~~a~~~~~~~~hw~~~~~d~r~~~~~ 482 (521)
..++.+|.+...+....++.+++++.+.++..||.+..++|+...|+
T Consensus 322 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (369)
T KOG1950|consen 322 LDLKVHCKLWAKESTEYPLVRPQAELAAFPEEHDKIDYKAPRAFKAI 368 (369)
T ss_pred hhhhhccccccccccccchhhchhHHhhcccccccccccCchhhhcc
Confidence 99999999998777778899999999999999999999999987764
No 12
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.89 E-value=1.9e-22 Score=206.18 Aligned_cols=197 Identities=19% Similarity=0.268 Sum_probs=137.3
Q ss_pred EEEeecChhhHHHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHc---CceEE--EEeeecCCccccc----ccc
Q 043696 192 ATILHSAHVYVCGAIAAAQSIRMAGS-TRDLVILVDETISDYHRGGLEAA---GWKIH--TIQRIRNPKAERD----AYN 261 (521)
Q Consensus 192 VTlLt~dd~Yl~gA~VL~~SLr~~ns-~~dlvVLvtd~Is~e~~~~Lk~~---g~~v~--~V~~I~~p~~~~~----~~~ 261 (521)
++++++++. +..+.++++|+..++. ...++|+.++.++++.++.|++. +.+.+ .+..|..|..... .+.
T Consensus 3 ~~vv~~g~~-~~~~~~~lkSil~~n~~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~~P~~~~~~ws~l~~ 81 (304)
T cd06430 3 LAVVACGER-LEETLTMLKSAIVFSQKPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPITFPSGNAAEWKKLFK 81 (304)
T ss_pred EEEEEcCCc-HHHHHHHHHHHHHhCCCCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEecCccchhhhhhccc
Confidence 455566554 8999999999988763 44556677666888888777765 22223 4455555543221 222
Q ss_pred hhhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcC--C----Ceeee-cCC------------------CCCccceE
Q 043696 262 EWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEM--P----EITAT-GNN------------------ATLFNSGV 315 (521)
Q Consensus 262 ~~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~--p----~iaAv-~d~------------------~~yFNSGV 315 (521)
..+|.||+++++ +++|||||||+|+||++||++||++ + .++|+ ++. ..+|||||
T Consensus 82 ~~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGV 161 (304)
T cd06430 82 PCAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGV 161 (304)
T ss_pred HHHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCcccccccccce
Confidence 368999999986 7899999999999999999999986 3 25554 221 13599999
Q ss_pred EEEecCHHHH---------------HHHHHHHhhc-CCCCCCchhHHHHhcc-c---ceecCCcccccccccC-CChHHH
Q 043696 316 MVVEPSNCTF---------------QLLMDHIYEI-ESYNGGDQGYLNEIFT-W---WHRIPKHMNFLKHFWE-GDEEEK 374 (521)
Q Consensus 316 MVInPs~~~f---------------~~L~e~l~~~-~sy~~~DQdiLN~vF~-~---w~~LP~~YN~l~~~~~-~~~~~~ 374 (521)
|+||...++. +++++.+++. ..+.++|||+||.+|. . +..||.+||++..... +..
T Consensus 162 mLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p~~~~~Lp~~wN~~~d~~~y~~~--- 238 (304)
T cd06430 162 MLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNPEMLYVFPCHWNYRPDHCMYGSN--- 238 (304)
T ss_pred eeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCCCeEEEcCccccCCccceeeccc---
Confidence 9999977654 3455556543 4577899999999998 4 7899999998764211 100
Q ss_pred HhhhhhcccCCCCCeEEEEecC-CC
Q 043696 375 KHMKIRLFGADPPILYVLHYLG-NK 398 (521)
Q Consensus 375 ~~~k~~~f~~~~~~~~IIHY~G-~K 398 (521)
...++.+.+++||..+ .|
T Consensus 239 ------~~~~~~~~~~~~H~n~~~~ 257 (304)
T cd06430 239 ------CKAAEEEGVFILHGNRGVY 257 (304)
T ss_pred ------ccccccccceEEEcCCCCC
Confidence 0112345799999986 44
No 13
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.88 E-value=6.9e-22 Score=197.64 Aligned_cols=185 Identities=18% Similarity=0.169 Sum_probs=130.5
Q ss_pred ecChhhHHHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHc----CceEEEEeeecCCcccc----cccchhhHH
Q 043696 196 HSAHVYVCGAIAAAQSIRMAGS-TRDLVILVDETISDYHRGGLEAA----GWKIHTIQRIRNPKAER----DAYNEWNYS 266 (521)
Q Consensus 196 t~dd~Yl~gA~VL~~SLr~~ns-~~dlvVLvtd~Is~e~~~~Lk~~----g~~v~~V~~I~~p~~~~----~~~~~~ty~ 266 (521)
++++.|+.++.|++.||.+++. .+.++|+. +++|++.++.|++. +.++..+.. ..|.... .....++|.
T Consensus 7 ~~~~~y~~~~~v~l~Sll~nn~~~~~fyil~-~~is~e~~~~l~~~~~~~~~~i~~i~i-~~~~~~~~~~~~~~~~~~y~ 84 (248)
T cd06432 7 ASGHLYERFLRIMMLSVMKNTKSPVKFWFIK-NFLSPQFKEFLPEMAKEYGFEYELVTY-KWPRWLHKQTEKQRIIWGYK 84 (248)
T ss_pred cCcHHHHHHHHHHHHHHHHcCCCCEEEEEEe-CCCCHHHHHHHHHHHHHhCCceEEEEe-cChhhhhcccccchhHHHHH
Confidence 5678999999999999999863 45566665 68999998887653 444433322 2111111 011135788
Q ss_pred HHHHhcc-C-CcceEEEeecCeeccCCchHhhcCCC----eeeecC-----------------------CCCCccceEEE
Q 043696 267 KFRLWQL-T-DYDKIIFIDADLLILRNIDFLFEMPE----ITATGN-----------------------NATLFNSGVMV 317 (521)
Q Consensus 267 KL~lw~L-~-eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d-----------------------~~~yFNSGVMV 317 (521)
||.+..+ + ++|||||||+|+||.+||++||+++. +||+.+ ...|||||||+
T Consensus 85 rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNSGVml 164 (248)
T cd06432 85 ILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHISALYV 164 (248)
T ss_pred HHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccceeeEE
Confidence 8888864 4 69999999999999999999999872 555532 11399999999
Q ss_pred EecCHHHHHHHHH----HHh---h-cCCCCCCchhHHHHhcc--cceecCCcccccccccCCChHHHHhhhhhcccCCCC
Q 043696 318 VEPSNCTFQLLMD----HIY---E-IESYNGGDQGYLNEIFT--WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPP 387 (521)
Q Consensus 318 InPs~~~f~~L~e----~l~---~-~~sy~~~DQdiLN~vF~--~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~ 387 (521)
||...++.+.+.+ .++ + ...+.++|||+||.++. .++.||.+||++... -.++ ..+
T Consensus 165 iNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~~i~~Lp~~w~~~~~~-~~~~-------------~~~ 230 (248)
T cd06432 165 VDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQVPIFSLPQEWLWCETW-CSDE-------------SKK 230 (248)
T ss_pred EeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccCCeEECChHHHHHHHH-hccc-------------ccC
Confidence 9998877665444 222 2 34578899999999996 499999999987543 1111 135
Q ss_pred CeEEEEecC
Q 043696 388 ILYVLHYLG 396 (521)
Q Consensus 388 ~~~IIHY~G 396 (521)
.+.+|||..
T Consensus 231 ~~~~~~~~~ 239 (248)
T cd06432 231 KAKTIDLCN 239 (248)
T ss_pred ccceeeccc
Confidence 689999953
No 14
>PLN02523 galacturonosyltransferase
Probab=99.87 E-value=2.8e-21 Score=207.87 Aligned_cols=212 Identities=17% Similarity=0.184 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHHh-CCCCcEEE-EECCCCCHHHHHHHHHc----C--ceEEEEeee--cC----Ccc----c-------
Q 043696 202 VCGAIAAAQSIRMA-GSTRDLVI-LVDETISDYHRGGLEAA----G--WKIHTIQRI--RN----PKA----E------- 256 (521)
Q Consensus 202 l~gA~VL~~SLr~~-ns~~dlvV-Lvtd~Is~e~~~~Lk~~----g--~~v~~V~~I--~~----p~~----~------- 256 (521)
+.+|.|.+.|+..+ ++..++|+ ++||.++....+.+-.. + +++..|+.+ .+ |-. .
T Consensus 258 vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~~~pvlk~l~s~~~~~~~ 337 (559)
T PLN02523 258 VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSSYVPVLRQLESANLQKFY 337 (559)
T ss_pred chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccccchHHHhhhhhhhhhhh
Confidence 89999999999987 56666665 77899998777665332 2 333444421 01 100 0
Q ss_pred ---------c----------cccchhhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecCC-----
Q 043696 257 ---------R----------DAYNEWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGNN----- 307 (521)
Q Consensus 257 ---------~----------~~~~~~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d~----- 307 (521)
. ...+..+|+||+++++ .+++||||||+|+||.+||++||+++. ++|+.+.
T Consensus 338 f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~ 417 (559)
T PLN02523 338 FENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFH 417 (559)
T ss_pred ccccccccccccccccccCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHH
Confidence 0 0122347999999997 779999999999999999999999872 5555431
Q ss_pred -------------CCCccc-------eEEEEecCHHHHHHHHHHHh----hcCCCCCCchhHHH---Hhcc-cceecCCc
Q 043696 308 -------------ATLFNS-------GVMVVEPSNCTFQLLMDHIY----EIESYNGGDQGYLN---EIFT-WWHRIPKH 359 (521)
Q Consensus 308 -------------~~yFNS-------GVMVInPs~~~f~~L~e~l~----~~~sy~~~DQdiLN---~vF~-~w~~LP~~ 359 (521)
..|||+ ||||||.+.++.+++.+.+. ......+.|||.|| .+|. ++..|+.+
T Consensus 418 r~~~~ln~s~p~i~~yFNs~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~gri~~LD~r 497 (559)
T PLN02523 418 RYAQYLNFSHPLIKEKFNPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFYSTTKPLDKS 497 (559)
T ss_pred HHHHhhcccchhhhhCcCCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhcCceEecCch
Confidence 136776 99999999988777766543 12345678999996 7887 99999999
Q ss_pred ccccccccCCChHHHHhhhhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhHHHH
Q 043696 360 MNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMPEHL 438 (521)
Q Consensus 360 YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p~~l 438 (521)
||++...+... ......+++.||||.| .|||...... ...+.||+|++.=-+.+
T Consensus 498 WNvlglGy~~~----------i~~~~i~~paIIHYnG~~KPWle~~i~---------------~yr~~W~kYl~~~~~fl 552 (559)
T PLN02523 498 WHVLGLGYNPS----------ISMDEIRNAAVIHFNGNMKPWLDIAMN---------------QFKPLWTKYVDYDMEFV 552 (559)
T ss_pred hhccCCccCCC----------ccccccCCCEEEEECCCCCccccCCCC---------------cchHHHHHHHccCCHHH
Confidence 99865322110 0112346799999999 9999864321 13578999876543333
No 15
>PLN02718 Probable galacturonosyltransferase
Probab=99.84 E-value=8.5e-21 Score=206.27 Aligned_cols=194 Identities=18% Similarity=0.186 Sum_probs=134.1
Q ss_pred hhhHHHHHHHHHHHHHh-CCCCcEEE-EECCCCCHHHHHHHHHcC----c--eEEEEeeecC-Ccc-----------ccc
Q 043696 199 HVYVCGAIAAAQSIRMA-GSTRDLVI-LVDETISDYHRGGLEAAG----W--KIHTIQRIRN-PKA-----------ERD 258 (521)
Q Consensus 199 d~Yl~gA~VL~~SLr~~-ns~~dlvV-Lvtd~Is~e~~~~Lk~~g----~--~v~~V~~I~~-p~~-----------~~~ 258 (521)
|+|+ ++.|++.|+..+ +....+++ +++++++.+..+.+.... . +++.++.... |.. ...
T Consensus 321 DNvl-aasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~~~~lk~l~s~~~~ 399 (603)
T PLN02718 321 DNVL-ACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADYNSLLMKQNSHDPR 399 (603)
T ss_pred CCce-eEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccchhhhhhccccccc
Confidence 5675 899999999987 23335654 678899999888765442 2 2333332110 110 011
Q ss_pred ccchhhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC---------------------------
Q 043696 259 AYNEWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN--------------------------- 306 (521)
Q Consensus 259 ~~~~~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d--------------------------- 306 (521)
.++..+|+||+++++ .+++||||||+|+||.+||++||+++. ++|+.+
T Consensus 400 ~~S~~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn 479 (603)
T PLN02718 400 YISALNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFD 479 (603)
T ss_pred cccHHHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccC
Confidence 234458999999996 679999999999999999999999872 444432
Q ss_pred -CCCCccceEEEEecCHHHHHHHHH----HHhhcCCCCCCchhHHH---Hhcc-cceecCCcccccccccCCChHHHHhh
Q 043696 307 -NATLFNSGVMVVEPSNCTFQLLMD----HIYEIESYNGGDQGYLN---EIFT-WWHRIPKHMNFLKHFWEGDEEEKKHM 377 (521)
Q Consensus 307 -~~~yFNSGVMVInPs~~~f~~L~e----~l~~~~sy~~~DQdiLN---~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~ 377 (521)
...|||+||||||+..++.+.+.+ .+.......+.|||.|| .+|. ++..||.+||.+...+....
T Consensus 480 ~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv~gLG~~~~i------ 553 (603)
T PLN02718 480 PKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHVLGLGHESGV------ 553 (603)
T ss_pred CCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhccCccccccc------
Confidence 124688999999999887765544 44333333567899987 7887 89999999998753221100
Q ss_pred hhhcccCCCCCeEEEEecC-CCCCCCC
Q 043696 378 KIRLFGADPPILYVLHYLG-NKPWLCF 403 (521)
Q Consensus 378 k~~~f~~~~~~~~IIHY~G-~KPW~~~ 403 (521)
......++.||||.| .|||...
T Consensus 554 ----~~~~i~~aaIIHYnG~~KPWle~ 576 (603)
T PLN02718 554 ----GASDIEQAAVIHYDGVMKPWLDI 576 (603)
T ss_pred ----cccccCCCEEEEECCCCCccccC
Confidence 011356899999999 9999864
No 16
>PLN02769 Probable galacturonosyltransferase
Probab=99.82 E-value=1.1e-19 Score=198.39 Aligned_cols=212 Identities=17% Similarity=0.200 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEE-EECCCCCHHHHHH------HHHcCceEEEEeeecCCcc------------------
Q 043696 202 VCGAIAAAQSIRMAGS-TRDLVI-LVDETISDYHRGG------LEAAGWKIHTIQRIRNPKA------------------ 255 (521)
Q Consensus 202 l~gA~VL~~SLr~~ns-~~dlvV-Lvtd~Is~e~~~~------Lk~~g~~v~~V~~I~~p~~------------------ 255 (521)
+..|.|.+.|...+.. -..+|+ ++||..+-...+. ++.+-++|..++.+.....
T Consensus 340 vlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~~~~~~~~l~~~~~~~~~~ 419 (629)
T PLN02769 340 VLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDLDKFALKQLSLPEEFRVSF 419 (629)
T ss_pred ceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeecccchHHHHhhccchhhhhhh
Confidence 5677888888877543 244554 7787766544332 2233344454443321100
Q ss_pred --------c--c-cccchhhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC-------------
Q 043696 256 --------E--R-DAYNEWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN------------- 306 (521)
Q Consensus 256 --------~--~-~~~~~~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d------------- 306 (521)
. . ...+..+|+||+|+++ .+++||||||+|+||.+||++||+++. ++|+.+
T Consensus 420 ~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~ 499 (629)
T PLN02769 420 RSVDNPSSKQMRTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLG 499 (629)
T ss_pred ccCCCCchhccCcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhc
Confidence 0 0 0112348999999996 679999999999999999999999872 666642
Q ss_pred ------CCCCccceEEEEecCHHHHHHHHHH----Hh---h--cCCCCCCchhHHHHhcc-cceecCCcccccccccCCC
Q 043696 307 ------NATLFNSGVMVVEPSNCTFQLLMDH----IY---E--IESYNGGDQGYLNEIFT-WWHRIPKHMNFLKHFWEGD 370 (521)
Q Consensus 307 ------~~~yFNSGVMVInPs~~~f~~L~e~----l~---~--~~sy~~~DQdiLN~vF~-~w~~LP~~YN~l~~~~~~~ 370 (521)
...||||||||||...++.+.+.+. +. + ...+..++|+.+|.+|. +++.||.+||++...+...
T Consensus 500 ~~~F~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g~v~~LD~rWNv~gLG~~~~ 579 (629)
T PLN02769 500 DTNFDTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQDLIYPLDDRWVLSGLGHDYG 579 (629)
T ss_pred ccCCCccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcCeEEECCHHHcccccccccc
Confidence 1347899999999988766544332 22 1 12345678889999998 8999999999864221100
Q ss_pred hHHHHhhhhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhHHHH
Q 043696 371 EEEKKHMKIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMPEHL 438 (521)
Q Consensus 371 ~~~~~~~k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p~~l 438 (521)
. .....++++||||+| .|||.....+ .+.+.||+|++.=-..+
T Consensus 580 i----------~~~~i~~paIIHYnG~~KPW~e~~i~---------------~yr~~W~kYl~~~~~fl 623 (629)
T PLN02769 580 I----------DEQAIKKAAVLHYNGNMKPWLELGIP---------------KYKKYWKRFLNRDDRFM 623 (629)
T ss_pred c----------cccccCCcEEEEECCCCCCccCCCCC---------------hHHHHHHHHhccCChHH
Confidence 0 011246899999999 9999865321 24689999987543333
No 17
>PLN02659 Probable galacturonosyltransferase
Probab=99.78 E-value=5.2e-19 Score=189.92 Aligned_cols=152 Identities=19% Similarity=0.271 Sum_probs=109.1
Q ss_pred hhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC------------------------------C
Q 043696 263 WNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN------------------------------N 307 (521)
Q Consensus 263 ~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d------------------------------~ 307 (521)
.+|+||+++++ .+++||||||+|+||.+||++||+++. ++|+.+ .
T Consensus 330 ~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yFn~~ 409 (534)
T PLN02659 330 MNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNFDPN 409 (534)
T ss_pred HHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhccCcc
Confidence 48999999997 789999999999999999999999872 455432 1
Q ss_pred CCCccceEEEEecCHHHHHHH----HHHHhhc--CCCCCCchhHH---HHhcc-cceecCCcccccccccCCChHHHHhh
Q 043696 308 ATLFNSGVMVVEPSNCTFQLL----MDHIYEI--ESYNGGDQGYL---NEIFT-WWHRIPKHMNFLKHFWEGDEEEKKHM 377 (521)
Q Consensus 308 ~~yFNSGVMVInPs~~~f~~L----~e~l~~~--~sy~~~DQdiL---N~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~ 377 (521)
..|||||||+||.+.++.+.+ ++.+++. ..+.+.|||+| |.+|. +++.||.+||++...+...
T Consensus 410 ~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~------- 482 (534)
T PLN02659 410 ECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQEN------- 482 (534)
T ss_pred ccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcCCEEECChhheecCCccccc-------
Confidence 247888999999988775554 4444432 34667899999 58888 9999999999854322110
Q ss_pred hhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhHHHHH
Q 043696 378 KIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMPEHLQ 439 (521)
Q Consensus 378 k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p~~l~ 439 (521)
..+. ..+++.||||+| .|||....-. .....|-+|.+.--..++
T Consensus 483 --~~~~-~i~~paIIHYnG~~KPW~~~~~~---------------~yr~~W~kYl~~s~~fl~ 527 (534)
T PLN02659 483 --TSLA-DAESAGVVHFNGRAKPWLDIAFP---------------QLRPLWAKYIDSSDKFIK 527 (534)
T ss_pred --cccc-ccCCcEEEEECCCCCccccccCC---------------cchhHHHHHhccCCHHHH
Confidence 0011 246899999999 9999975321 224667666665444443
No 18
>PLN02867 Probable galacturonosyltransferase
Probab=99.78 E-value=3.8e-19 Score=191.57 Aligned_cols=133 Identities=20% Similarity=0.249 Sum_probs=100.3
Q ss_pred hhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC------------------------------C
Q 043696 263 WNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN------------------------------N 307 (521)
Q Consensus 263 ~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d------------------------------~ 307 (521)
.+|+||+++++ .+++||||||+|+||.+||++||+++. ++|+.| .
T Consensus 331 lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~i~~~~~p~ 410 (535)
T PLN02867 331 LNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPLISSNLDQE 410 (535)
T ss_pred HHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchhhhccCCCC
Confidence 47999999997 789999999999999999999999972 677632 1
Q ss_pred CCCccceEEEEecCHHHHHHHHHH----HhhcC--CCCCCchhHHHH---hcc-cceecCCcccccccccCCChHHHHhh
Q 043696 308 ATLFNSGVMVVEPSNCTFQLLMDH----IYEIE--SYNGGDQGYLNE---IFT-WWHRIPKHMNFLKHFWEGDEEEKKHM 377 (521)
Q Consensus 308 ~~yFNSGVMVInPs~~~f~~L~e~----l~~~~--sy~~~DQdiLN~---vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~ 377 (521)
..||||||||||...++.+++.+. ++... .....|||.||. +|. +|..||.+||++. ......
T Consensus 411 ~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~g-Lgy~~~------ 483 (535)
T PLN02867 411 RCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKGHVHPIDPSWHVAG-LGSRPP------ 483 (535)
T ss_pred CcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcCcEEECChhhcccC-CCcccc------
Confidence 247889999999998877766544 33322 245689999996 777 9999999999843 211110
Q ss_pred hhhcccCCCCCeEEEEecC-CCCCCCCC
Q 043696 378 KIRLFGADPPILYVLHYLG-NKPWLCFR 404 (521)
Q Consensus 378 k~~~f~~~~~~~~IIHY~G-~KPW~~~~ 404 (521)
.......+++.||||+| .|||+...
T Consensus 484 --~~~~~~i~~paIIHYnG~~KPW~e~~ 509 (535)
T PLN02867 484 --EVPREILESAAVLHFSGPAKPWLEIG 509 (535)
T ss_pred --cchhhhcCCcEEEEECCCCCcccccC
Confidence 00112246899999999 99998754
No 19
>PLN02870 Probable galacturonosyltransferase
Probab=99.78 E-value=2.8e-19 Score=191.99 Aligned_cols=156 Identities=19% Similarity=0.274 Sum_probs=111.5
Q ss_pred hhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC------------------------------C
Q 043696 263 WNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN------------------------------N 307 (521)
Q Consensus 263 ~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d------------------------------~ 307 (521)
.+|+||+++++ .+++||||||+|+||++||++||+++. ++|+.+ .
T Consensus 329 lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i~~~fd~~ 408 (533)
T PLN02870 329 LNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLIAKNLDPE 408 (533)
T ss_pred HHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchhhcccCcc
Confidence 48999999996 779999999999999999999999872 555543 1
Q ss_pred CCCccceEEEEecCHHHHHHHH----HHHhhc--CCCCCCchhHH---HHhcc-cceecCCcccccccccCCChHHHHhh
Q 043696 308 ATLFNSGVMVVEPSNCTFQLLM----DHIYEI--ESYNGGDQGYL---NEIFT-WWHRIPKHMNFLKHFWEGDEEEKKHM 377 (521)
Q Consensus 308 ~~yFNSGVMVInPs~~~f~~L~----e~l~~~--~sy~~~DQdiL---N~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~ 377 (521)
..||||||||||.+.++.+.+. +.+.+. ..+.+.|||.| |.+|. +++.||.+||++...+...
T Consensus 409 ~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~------- 481 (533)
T PLN02870 409 ECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSK------- 481 (533)
T ss_pred cceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcCceEECChHHhcCCCCCccc-------
Confidence 2356699999999887765554 444332 34668999999 57887 8999999999854322110
Q ss_pred hhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhHHHHHHHhhh
Q 043696 378 KIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMPEHLQKFCLL 444 (521)
Q Consensus 378 k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p~~l~~~c~l 444 (521)
......+++.||||+| .|||...... -.+.+|.-|-.....+-+-|..
T Consensus 482 ---~~~~~i~~aaIIHY~G~~KPW~~~~~~----------------~yr~~W~kYl~~s~~fl~~Cni 530 (533)
T PLN02870 482 ---TNIESVKKAAVIHYNGQSKPWLEIGFE----------------HLRPFWTKYVNYSNDFIRNCHI 530 (533)
T ss_pred ---ccccccCCcEEEEECCCCCCccccCcc----------------chhHHHHHHHccCchHhhhcCC
Confidence 1112356899999999 9999854311 1356666666555555555543
No 20
>PLN02742 Probable galacturonosyltransferase
Probab=99.76 E-value=6.4e-18 Score=181.89 Aligned_cols=213 Identities=15% Similarity=0.150 Sum_probs=140.0
Q ss_pred HHHHHHHHHHHHHhCCC-CcEEE-EECCCCCHHHHHHHH------HcCceEEEEeeec---CCccc--------------
Q 043696 202 VCGAIAAAQSIRMAGST-RDLVI-LVDETISDYHRGGLE------AAGWKIHTIQRIR---NPKAE-------------- 256 (521)
Q Consensus 202 l~gA~VL~~SLr~~ns~-~dlvV-Lvtd~Is~e~~~~Lk------~~g~~v~~V~~I~---~p~~~-------------- 256 (521)
+.+|.|.+.|...+..+ ..+|+ ++||..+-...+..= .+-++++.++.+. .....
T Consensus 237 vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~~~pvl~ql~~~~~~~~y 316 (534)
T PLN02742 237 ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNASYVPVLKQLQDSDTQSYY 316 (534)
T ss_pred chhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccccchHHHHhhhhhhhhhh
Confidence 66788888888765332 23554 678777665543321 2224445544321 10000
Q ss_pred ----------------ccccchhhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC---------
Q 043696 257 ----------------RDAYNEWNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN--------- 306 (521)
Q Consensus 257 ----------------~~~~~~~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d--------- 306 (521)
....+..+|.||+++++ .+++||||||+|+||.+||++||+++. ++|+.+
T Consensus 317 f~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~ 396 (534)
T PLN02742 317 FSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYH 396 (534)
T ss_pred cccccccccccccccCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhh
Confidence 00112348999999996 679999999999999999999999872 566542
Q ss_pred ----------------CCCCccceEEEEecCHHHHHHHHHHHh----hcCCCCCCchhHHHHh---cc-cceecCCcccc
Q 043696 307 ----------------NATLFNSGVMVVEPSNCTFQLLMDHIY----EIESYNGGDQGYLNEI---FT-WWHRIPKHMNF 362 (521)
Q Consensus 307 ----------------~~~yFNSGVMVInPs~~~f~~L~e~l~----~~~sy~~~DQdiLN~v---F~-~w~~LP~~YN~ 362 (521)
...+||+|||||++..++.+.+.+.+. ........|||.||.. |. ++..|+.+||.
T Consensus 397 ~yLnfS~p~i~~~f~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g~~~~LD~rWNv 476 (534)
T PLN02742 397 KYLNFSHPLISSHFDPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYGLTEPLDRRWHV 476 (534)
T ss_pred hhhcccchhhhccCCCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcCcceecChhhee
Confidence 236899999999999887776655432 2334456799999964 76 89999999998
Q ss_pred cccccCCChHHHHhhhhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhHHHHH
Q 043696 363 LKHFWEGDEEEKKHMKIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMPEHLQ 439 (521)
Q Consensus 363 l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p~~l~ 439 (521)
+...+.... . ....+++.||||.| .|||...... ...+.|++|.+.--..++
T Consensus 477 ~gLG~~~~v------~----~~~i~~aaILHynG~~KPWl~~~i~---------------~yr~~W~kYl~~s~~fl~ 529 (534)
T PLN02742 477 LGLGYDTNI------D----PRLIESAAVLHFNGNMKPWLKLAIE---------------RYKPLWERYVNYSHPYLQ 529 (534)
T ss_pred ccccccccc------c----hhhccCCeEEEECCCCCcccccCCc---------------ccchHHHHHHccCCHHHH
Confidence 642221000 0 01346789999999 9999875311 124689888876555444
No 21
>PLN02829 Probable galacturonosyltransferase
Probab=99.76 E-value=2.6e-18 Score=186.81 Aligned_cols=131 Identities=20% Similarity=0.231 Sum_probs=98.0
Q ss_pred hhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC-------------------------CCCCcc
Q 043696 263 WNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN-------------------------NATLFN 312 (521)
Q Consensus 263 ~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d-------------------------~~~yFN 312 (521)
.+|+||+++++ .+++||||||+|+||.+||++||+++. ++|+.+ ...|||
T Consensus 443 lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn~~~CyFN 522 (639)
T PLN02829 443 LNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNFDPHACGWA 522 (639)
T ss_pred HHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhccCCccccee
Confidence 47999999997 679999999999999999999999872 455532 235799
Q ss_pred ceEEEEecCHHHHHHHHHHH----hhcCCCCCCchhHHHHh---cc-cceecCCcccccccccCCChHHHHhhhhhcccC
Q 043696 313 SGVMVVEPSNCTFQLLMDHI----YEIESYNGGDQGYLNEI---FT-WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGA 384 (521)
Q Consensus 313 SGVMVInPs~~~f~~L~e~l----~~~~sy~~~DQdiLN~v---F~-~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~ 384 (521)
+||||||...++.+.+.+.+ .....-...|||.||.+ |. ++..|+.+||++...+.. ..+..
T Consensus 523 SGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g~i~~LD~rWNv~GLGy~~----------~v~~~ 592 (639)
T PLN02829 523 YGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWKRTYPLDRSWHVLGLGYNP----------NVNQR 592 (639)
T ss_pred cceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcCceEecChhheecCCCCCc----------ccchh
Confidence 99999999988776654433 22222234789999975 35 999999999997643211 11122
Q ss_pred CCCCeEEEEecC-CCCCCCC
Q 043696 385 DPPILYVLHYLG-NKPWLCF 403 (521)
Q Consensus 385 ~~~~~~IIHY~G-~KPW~~~ 403 (521)
...++.||||.| .|||...
T Consensus 593 ~i~~aaIIHynG~~KPWle~ 612 (639)
T PLN02829 593 DIERAAVIHYNGNMKPWLEI 612 (639)
T ss_pred cccCCeEEEECCCCCccccC
Confidence 456789999999 9999864
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.70 E-value=2.7e-18 Score=172.60 Aligned_cols=218 Identities=26% Similarity=0.454 Sum_probs=147.8
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHhCC-CCcEE-EEECCCCCHHHHHHHHHcCceEEEEeeecCC----c--cc
Q 043696 185 RARREAYATILHSAHVYVCGAIAAAQSIRMAGS-TRDLV-ILVDETISDYHRGGLEAAGWKIHTIQRIRNP----K--AE 256 (521)
Q Consensus 185 ~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns-~~dlv-VLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p----~--~~ 256 (521)
.....|+++.++.-|-|+..+.++.+-|.+++. +..+| +|.-+++.+-..+.|.-.|..+..|++|... . ..
T Consensus 67 ~ng~~al~n~~t~~d~y~N~Tr~lv~~Lk~~~etkaKlV~vL~mkg~d~wk~d~l~ldga~~~~vq~i~~hevv~~~~di 146 (368)
T COG5597 67 TNGDYALGNRATLRDIYLNRTRALVVVLKTGGETKAKLVEVLTMKGCDLWKTDLLPLDGAFNARVQRINVHEVVPFTKDI 146 (368)
T ss_pred hcCcccccchhhhhceeecccceehhhhhhcCcchhheeeehhhcccchhhhhccccchHHHHHhccchHhhhhhhhhcc
Confidence 455788887666555555558888888888763 44454 4566677777667777666555545544311 1 11
Q ss_pred ccccchh--hHHHHHHhccCCcceEEEeecCeeccCCchHhhcCC--CeeeecC--------------------------
Q 043696 257 RDAYNEW--NYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMP--EITATGN-------------------------- 306 (521)
Q Consensus 257 ~~~~~~~--ty~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF~~p--~iaAv~d-------------------------- 306 (521)
.....+| +|+||++|+++|||||||||+|.||++|||+||++| +++|.+|
T Consensus 147 ~~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faay 226 (368)
T COG5597 147 KPDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAY 226 (368)
T ss_pred CcCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhh
Confidence 1123344 799999999999999999999999999999999987 4333211
Q ss_pred ----------------------------CCCCccceEEEEecCHHHHHHHHHHHhhcCCC---CCCchhHHHHhcc----
Q 043696 307 ----------------------------NATLFNSGVMVVEPSNCTFQLLMDHIYEIESY---NGGDQGYLNEIFT---- 351 (521)
Q Consensus 307 ----------------------------~~~yFNSGVMVInPs~~~f~~L~e~l~~~~sy---~~~DQdiLN~vF~---- 351 (521)
.+.+||||+||++|+...+.+++...- ..-| +.-.|.++|-.++
T Consensus 227 g~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~al-Pklydda~mmeqsllnlaYn~~g~ 305 (368)
T COG5597 227 GKMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFAL-PKLYDDADMMEQSLLNLAYNYEGF 305 (368)
T ss_pred cccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhh-HHhhhhhhHHHHHHHHHHHhhhcc
Confidence 236899999999999999999887652 1122 2346899999887
Q ss_pred -cceecCCcccccccccCCChHHHHhhhhhcccCCCCCeEEEEecCCCCCCCCCCCCCCcccccchhccchhHHhHHH-H
Q 043696 352 -WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHYLGNKPWLCFRDYDCNWNVDILQEFASDIAHKTWW-K 429 (521)
Q Consensus 352 -~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~G~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW-~ 429 (521)
-|.++..+|| ++|..+.+ .+-.+.+|+ |||..... .| .+.+...|| +
T Consensus 306 FPwerld~~yN---G~wa~~nd-------------lPylka~Hg---K~W~y~g~-----------~f-p~i~~~ew~~d 354 (368)
T COG5597 306 FPWERLDPRYN---GYWADAND-------------LPYLKAWHG---KPWFYTGE-----------QF-PDIAGLEWPQD 354 (368)
T ss_pred CchhhcCcccc---cccccccc-------------cchHHHhhc---CcCCCCcc-----------cC-hhhhcCcChhh
Confidence 4778888999 67664321 233566787 99986432 12 234567788 4
Q ss_pred HHhhh
Q 043696 430 VHDAM 434 (521)
Q Consensus 430 vyd~~ 434 (521)
.+.++
T Consensus 355 af~E~ 359 (368)
T COG5597 355 AFTEP 359 (368)
T ss_pred hhhcH
Confidence 44444
No 23
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.70 E-value=4.1e-17 Score=177.41 Aligned_cols=131 Identities=21% Similarity=0.264 Sum_probs=99.7
Q ss_pred hhHHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCCC----eeeecC-------------------------CCCCcc
Q 043696 263 WNYSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMPE----ITATGN-------------------------NATLFN 312 (521)
Q Consensus 263 ~ty~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~d-------------------------~~~yFN 312 (521)
.+|+||+++++ .+++||||||+|+||.+||++||+++. ++|+.+ ...|||
T Consensus 461 lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFNs~aCyfN 540 (657)
T PLN02910 461 LNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFDPNACGWA 540 (657)
T ss_pred HHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhccCCCCceee
Confidence 47999999997 679999999999999999999999872 444432 134566
Q ss_pred ceEEEEecCHHHHHHHHHHHh---h-cCCCCCCchhHHH---Hhcc-cceecCCcccccccccCCChHHHHhhhhhcccC
Q 043696 313 SGVMVVEPSNCTFQLLMDHIY---E-IESYNGGDQGYLN---EIFT-WWHRIPKHMNFLKHFWEGDEEEKKHMKIRLFGA 384 (521)
Q Consensus 313 SGVMVInPs~~~f~~L~e~l~---~-~~sy~~~DQdiLN---~vF~-~w~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~ 384 (521)
+||||||.+.++.+.+.+.+. + .......|||.|| .+|. .+..|+.+||.+...+.. ..+..
T Consensus 541 sGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g~i~pLD~rWNv~GLGyd~----------~v~~~ 610 (657)
T PLN02910 541 FGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYNLTYPLDRSWHVLGLGYDP----------ALNQT 610 (657)
T ss_pred cccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhCceeecCchheecCCCCCc----------ccccc
Confidence 799999999888776655332 2 3456678999999 5776 999999999987633211 11222
Q ss_pred CCCCeEEEEecC-CCCCCCC
Q 043696 385 DPPILYVLHYLG-NKPWLCF 403 (521)
Q Consensus 385 ~~~~~~IIHY~G-~KPW~~~ 403 (521)
...++.||||.| .|||...
T Consensus 611 ~i~~AAVLHynG~~KPWl~l 630 (657)
T PLN02910 611 EIENAAVVHYNGNYKPWLDL 630 (657)
T ss_pred cccCcEEEEeCCCCCccccc
Confidence 456799999999 9999864
No 24
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=98.20 E-value=9.6e-06 Score=82.54 Aligned_cols=112 Identities=17% Similarity=0.237 Sum_probs=79.1
Q ss_pred ChhhHHHHHHHHHHHHHhCCCCcEEEEEC--CCCCHHHHHHHHH-cCceEEEEeeecCCcccccccc-hhhHHHHHHhcc
Q 043696 198 AHVYVCGAIAAAQSIRMAGSTRDLVILVD--ETISDYHRGGLEA-AGWKIHTIQRIRNPKAERDAYN-EWNYSKFRLWQL 273 (521)
Q Consensus 198 dd~Yl~gA~VL~~SLr~~ns~~dlvVLvt--d~Is~e~~~~Lk~-~g~~v~~V~~I~~p~~~~~~~~-~~ty~KL~lw~L 273 (521)
.+.|+..|..+++.||..|++.||-|++. ++++++.++.|.. ..+..+.+..+..+........ ..-..|.++--.
T Consensus 9 g~~~~~~a~~lI~~LR~~g~~LPIEI~~~~~~dl~~~~~~~l~~~q~v~~vd~~~~~~~~~~~~~~~~~~~~~K~lA~l~ 88 (271)
T PF11051_consen 9 GDKYLWLALRLIRVLRRLGNTLPIEIIYPGDDDLSKEFCEKLLPDQDVWFVDASCVIDPDYLGKSFSKKGFQNKWLALLF 88 (271)
T ss_pred cCccHHHHHHHHHHHHHhCCCCCEEEEeCCccccCHHHHHHHhhhhhhheecceEEeeccccccccccCCchhhhhhhhh
Confidence 45899999999999999999999988776 7899999988876 2233333333222221111111 011245444445
Q ss_pred CCcceEEEeecCeeccCCchHhhcCCCeeeecCCCCCccceEEEE
Q 043696 274 TDYDKIIFIDADLLILRNIDFLFEMPEITATGNNATLFNSGVMVV 318 (521)
Q Consensus 274 ~eYDRVLYLDaD~LVl~nLDeLF~~p~iaAv~d~~~yFNSGVMVI 318 (521)
..++.||+||||.+.+.|++.||+.+. |-.+|.+++
T Consensus 89 ssFeevllLDaD~vpl~~p~~lF~~~~---------yk~tG~lfw 124 (271)
T PF11051_consen 89 SSFEEVLLLDADNVPLVDPEKLFESEE---------YKKTGALFW 124 (271)
T ss_pred CCcceEEEEcCCcccccCHHHHhcCcc---------ccccCEEEE
Confidence 889999999999999999999998654 666777777
No 25
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.73 E-value=0.00026 Score=68.60 Aligned_cols=123 Identities=23% Similarity=0.298 Sum_probs=74.9
Q ss_pred CCHHHHHHHHHcCceEEEEeeecCCcc-c-----ccccchhhHHHHHHhc-c-CCcceEEEeecCeeccCCchHhhcCC-
Q 043696 229 ISDYHRGGLEAAGWKIHTIQRIRNPKA-E-----RDAYNEWNYSKFRLWQ-L-TDYDKIIFIDADLLILRNIDFLFEMP- 299 (521)
Q Consensus 229 Is~e~~~~Lk~~g~~v~~V~~I~~p~~-~-----~~~~~~~ty~KL~lw~-L-~eYDRVLYLDaD~LVl~nLDeLF~~p- 299 (521)
++++..+.|++.|.....+.....+.. . ...+...++.|..+-. + ..---|+|+|+|++.++|+.++|+.+
T Consensus 11 ~D~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~ 90 (212)
T PF03407_consen 11 LDEETYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPD 90 (212)
T ss_pred ECHHHHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCC
Confidence 456777788888877654433211111 0 1122234566655442 2 22335999999999999999999333
Q ss_pred -CeeeecC---------CCCCccceEEEEecCHHHHHHHHHHHhhcCCC-CCCchhHHHHhcc
Q 043696 300 -EITATGN---------NATLFNSGVMVVEPSNCTFQLLMDHIYEIESY-NGGDQGYLNEIFT 351 (521)
Q Consensus 300 -~iaAv~d---------~~~yFNSGVMVInPs~~~f~~L~e~l~~~~sy-~~~DQdiLN~vF~ 351 (521)
++....| ....+|+|+|.++++..+...+.+........ ...||.++|.++.
T Consensus 91 ~Di~~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~~~~~DQ~~~n~~l~ 153 (212)
T PF03407_consen 91 ADILFSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAESPGCWDQQAFNELLR 153 (212)
T ss_pred CceEEecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 3433322 23457999999999987755444433322111 2359999999987
No 26
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=95.88 E-value=0.053 Score=64.67 Aligned_cols=169 Identities=17% Similarity=0.196 Sum_probs=107.2
Q ss_pred EEEeecChhhHHHHHHHHHHHHHhCCCCcEEE-EECCCCCHHHHHHH----HHcCceEEEEeeecCCccccc----ccch
Q 043696 192 ATILHSAHVYVCGAIAAAQSIRMAGSTRDLVI-LVDETISDYHRGGL----EAAGWKIHTIQRIRNPKAERD----AYNE 262 (521)
Q Consensus 192 VTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvV-Lvtd~Is~e~~~~L----k~~g~~v~~V~~I~~p~~~~~----~~~~ 262 (521)
+.-+++++-|=.-..+++.|+.++ ++.++-+ +...-+|+.-++.+ ++++.+..-|+. ..|.-.+. ..-.
T Consensus 1184 IFSvASGHLYERflrIMm~Svlkn-TktpVKFWfLkNyLSPtFKe~iP~mA~eYnFeyElv~Y-kWPrWLhqQ~EKQRii 1261 (1470)
T KOG1879|consen 1184 IFSVASGHLYERFLRIMMLSVLKN-TKTPVKFWFLKNYLSPTFKESIPHMAKEYNFEYELVQY-KWPRWLHQQTEKQRII 1261 (1470)
T ss_pred EEeeccccHHHHHHHHHHHHHHhC-CCCceeEEeehhhcChHHHHHHHHHHHHhCceEEEEEe-cCchhhhhhhhhhhhh
Confidence 333566789999999999999875 3444322 44567888776554 356666655543 22332211 1112
Q ss_pred hhHHHHHHhcc--CCcceEEEeecCeeccCCchHhhcCCC----eeeec--------C---------------CCCCccc
Q 043696 263 WNYSKFRLWQL--TDYDKIIFIDADLLILRNIDFLFEMPE----ITATG--------N---------------NATLFNS 313 (521)
Q Consensus 263 ~ty~KL~lw~L--~eYDRVLYLDaD~LVl~nLDeLF~~p~----iaAv~--------d---------------~~~yFNS 313 (521)
|.|--|++-=| ...+||||+|||-||..||+||.+++. .+-+| | ...|-=|
T Consensus 1262 WgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~grkYHIS 1341 (1470)
T KOG1879|consen 1262 WGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRGRKYHIS 1341 (1470)
T ss_pred hhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHHhccCccccc
Confidence 45544555444 578999999999999999999988863 22222 1 2356678
Q ss_pred eEEEEecCHHH----HHHHHHHH---h-hcCCCCCCchhHHHHhcc--cceecCCcccc
Q 043696 314 GVMVVEPSNCT----FQLLMDHI---Y-EIESYNGGDQGYLNEIFT--WWHRIPKHMNF 362 (521)
Q Consensus 314 GVMVInPs~~~----f~~L~e~l---~-~~~sy~~~DQdiLN~vF~--~w~~LP~~YN~ 362 (521)
.+.|+++..-+ -+++.-+. . ...++..-|||+-|.+-. -++.||..|=.
T Consensus 1342 ALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqVpIkSLPqeWLW 1400 (1470)
T KOG1879|consen 1342 ALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQVPIKSLPQEWLW 1400 (1470)
T ss_pred eeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhccccccccceeecccccCCcchhh
Confidence 88898875421 12332222 1 244666779999999987 67889887543
No 27
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=94.35 E-value=0.52 Score=50.86 Aligned_cols=130 Identities=20% Similarity=0.374 Sum_probs=75.9
Q ss_pred hccCCcceEEEeecCeeccCCchHhhcCCC--ee---ee--c--------CCCCCccceEEEEecCHHHHHHHHHHH---
Q 043696 271 WQLTDYDKIIFIDADLLILRNIDFLFEMPE--IT---AT--G--------NNATLFNSGVMVVEPSNCTFQLLMDHI--- 332 (521)
Q Consensus 271 w~L~eYDRVLYLDaD~LVl~nLDeLF~~p~--ia---Av--~--------d~~~yFNSGVMVInPs~~~f~~L~e~l--- 332 (521)
-..+++|=|-|||+|.||+.. -|++|. +. -+ + ..-.-+|+|+++|..+++..+-|-..+
T Consensus 193 ~~~PeaEWiWWLDsDALImNm---sfelPlery~~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mg 269 (429)
T PLN03182 193 LAHPEVEWIWWMDSDALFTDM---TFEIPLEKYEGYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMG 269 (429)
T ss_pred HHCCCceEEEEecCCceeecC---CCCCCHhHcCCcCeeeccchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcC
Confidence 344789999999999999852 344441 10 01 0 122478999999999887655443211
Q ss_pred -----------------hhcCCCCCCchhHHHHhcc----cce---ecCCcccccccccCCChHHHHhhhhhcccC---C
Q 043696 333 -----------------YEIESYNGGDQGYLNEIFT----WWH---RIPKHMNFLKHFWEGDEEEKKHMKIRLFGA---D 385 (521)
Q Consensus 333 -----------------~~~~sy~~~DQdiLN~vF~----~w~---~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~---~ 385 (521)
.....+...||..|-++.. +|. .|-..|-+ .++|.+--.....+ .+.+.. +
T Consensus 270 p~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l-~Gyw~~iv~~yee~-~~~~~~g~gd 347 (429)
T PLN03182 270 PKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYL-HGYWVGLVDRYEEM-MEKYHPGLGD 347 (429)
T ss_pred CCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeeccee-ccccHHHHHHHHHH-HHhcCCCCCC
Confidence 1122455689999999984 353 56555544 34554321100000 011111 1
Q ss_pred CCCeEEEEecCCCCCCCCCC
Q 043696 386 PPILYVLHYLGNKPWLCFRD 405 (521)
Q Consensus 386 ~~~~~IIHY~G~KPW~~~~~ 405 (521)
-.-|.|.||+|.||-.....
T Consensus 348 ~rwPfvtHF~GckpC~~~~~ 367 (429)
T PLN03182 348 DRWPFVTHFVGCKPCGGYGD 367 (429)
T ss_pred cccceeEeeccceecCCCCC
Confidence 24689999999999755443
No 28
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=93.29 E-value=0.26 Score=52.55 Aligned_cols=185 Identities=13% Similarity=0.200 Sum_probs=94.6
Q ss_pred CCcccccccccccccc-ccCCCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHH---HHHHHHHc
Q 043696 165 PVGSCELAVPLKAKEN-FYSERARREAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDY---HRGGLEAA 240 (521)
Q Consensus 165 pvgs~~~a~p~~~~~~-~~~~~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e---~~~~Lk~~ 240 (521)
=+|||..+++...... .+...-+...+-|-......+=.--.-.+-|+.+++|+..++|+...--+.+ ..+-+-..
T Consensus 105 ~~~s~~~~~sf~~~~~~~~~~~c~~~~fm~w~S~~~~f~~r~~~sIESa~k~hP~~cv~vls~t~ds~~~~s~~kp~~~~ 184 (409)
T KOG1928|consen 105 NLSSELKSPSFQSRVNSFFRKECSVRFFMTWISPAESFGVREMCSIESAFKTHPEGCVVVLSKTMDSPNGYSILKPFLDS 184 (409)
T ss_pred eccccccCcccCCCcchhhccCCceeEEEEecccccCCChhhhhhhHHHHhhCCCceEEEEEccccCCCCccccccHhHh
Confidence 3567777766554332 2222223333333333222222223446789999999999988764211111 12223333
Q ss_pred CceEEEEeeecCCccccc-------------c-----cc----hhhHHHHH-HhccCCcceEEEeecCeeccCCchHhhc
Q 043696 241 GWKIHTIQRIRNPKAERD-------------A-----YN----EWNYSKFR-LWQLTDYDKIIFIDADLLILRNIDFLFE 297 (521)
Q Consensus 241 g~~v~~V~~I~~p~~~~~-------------~-----~~----~~ty~KL~-lw~L~eYDRVLYLDaD~LVl~nLDeLF~ 297 (521)
|.+++.+.+- .|...++ . ++ -..+.||. +|.... ||||+|+||++||..|=+
T Consensus 185 ~lsv~~v~~~-lp~llk~t~~e~~l~~~k~g~~~~~~~~l~~~lSdl~RLA~LyKYGG----vYLDTDvIvLksl~~l~N 259 (409)
T KOG1928|consen 185 GLSVIAVTPD-LPFLLKDTPGETWLERWKDGRLDPGKIPLLQNLSDLSRLALLYKYGG----VYLDTDVIVLKSLSNLRN 259 (409)
T ss_pred hhhhcccccC-chhhHhhCccccHHHHHHhcccCCCcccchhhHHHHHHHHHHHHhCC----EEeeccEEEecccccccc
Confidence 4444333211 1111110 0 00 12355654 355433 899999999999998875
Q ss_pred CCCeeeecCCCCCccceEEEEecCHHHH-HHHHHHHhhcCCCCCC--chhHHHHhcccce
Q 043696 298 MPEITATGNNATLFNSGVMVVEPSNCTF-QLLMDHIYEIESYNGG--DQGYLNEIFTWWH 354 (521)
Q Consensus 298 ~p~iaAv~d~~~yFNSGVMVInPs~~~f-~~L~e~l~~~~sy~~~--DQdiLN~vF~~w~ 354 (521)
.-...++.....+.|.+||.+.+....- +.|.++......-..| -.+++.-++++|.
T Consensus 260 ~ig~~~~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~tfNg~~WG~NGP~LvTRVakr~c 319 (409)
T KOG1928|consen 260 VIGVDPATQAWTRLNNAVLIFDKNHPFLLECLREFALTYNGNIWGHNGPYLVTRVAKRWC 319 (409)
T ss_pred cccccchhhHHHhhcCceeecCCCCHHHHHHHHHHHHhccccccccCCcHHHHHHHHHHh
Confidence 3221111124568999999999976544 4444554432111122 2457777777544
No 29
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=91.19 E-value=0.15 Score=51.18 Aligned_cols=87 Identities=17% Similarity=0.289 Sum_probs=17.0
Q ss_pred hHHHHHHh-----ccCCcceEEEeecCeeccCCchHh---hcCC----C-------------e-e--ee--c--------
Q 043696 264 NYSKFRLW-----QLTDYDKIIFIDADLLILRNIDFL---FEMP----E-------------I-T--AT--G-------- 305 (521)
Q Consensus 264 ty~KL~lw-----~L~eYDRVLYLDaD~LVl~nLDeL---F~~p----~-------------i-a--Av--~-------- 305 (521)
+|.|+.+- ..++++=|.|||+|+||...=-+| +--| . + . .. +
T Consensus 60 ~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li~t 139 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLIIT 139 (239)
T ss_dssp HHTHHHHHHHHHHH-TT-SEEEEE-TTEEE--------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46665443 337789999999999999742232 2101 0 0 0 00 0
Q ss_pred CCCCCccceEEEEecCHHHHHHHHHHHhh----cCCC---CCCchhHHHHhcc
Q 043696 306 NNATLFNSGVMVVEPSNCTFQLLMDHIYE----IESY---NGGDQGYLNEIFT 351 (521)
Q Consensus 306 d~~~yFNSGVMVInPs~~~f~~L~e~l~~----~~sy---~~~DQdiLN~vF~ 351 (521)
.....+|+|+++++.+..... +++.... .... ...||..|-.++.
T Consensus 140 ~d~~gLNtGsFliRns~ws~~-fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~ 191 (239)
T PF05637_consen 140 QDWNGLNTGSFLIRNSPWSRD-FLDAWADPLYRNYDWDQLEFDEQSALEHLLQ 191 (239)
T ss_dssp -----------------------------------------------------
T ss_pred ccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 134679999999999887754 4344322 1112 3679999998886
No 30
>PLN03181 glycosyltransferase; Provisional
Probab=90.79 E-value=2.1 Score=46.41 Aligned_cols=97 Identities=15% Similarity=0.254 Sum_probs=59.5
Q ss_pred hHHHHHH-----hccCCcceEEEeecCeeccCCchHhhcCC-----Ceeee----c------CCCCCccceEEEEecCHH
Q 043696 264 NYSKFRL-----WQLTDYDKIIFIDADLLILRNIDFLFEMP-----EITAT----G------NNATLFNSGVMVVEPSNC 323 (521)
Q Consensus 264 ty~KL~l-----w~L~eYDRVLYLDaD~LVl~nLDeLF~~p-----~iaAv----~------d~~~yFNSGVMVInPs~~ 323 (521)
.|.|+-+ -+.++++-|-|||+|+||+.. -|.+| ..--+ + ..-.-||+|+++|+.+++
T Consensus 182 ~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp---~~sLPl~ry~~~NLvvhg~p~~vy~~qdw~GlN~GsFLIRNcqW 258 (453)
T PLN03181 182 YWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDM---DFKLPLHRYRDHNLVVHGWPKLIYEKRSWTALNAGVFLIRNCQW 258 (453)
T ss_pred hhhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhhcCCccccccCCcccccccccccccceeeeEEecCHH
Confidence 4555543 345889999999999999964 12222 11101 1 123679999999999876
Q ss_pred HHHHHHHHH--------------------hhcCCCCCCchhHHHHhcc----cce---ecCCccccc
Q 043696 324 TFQLLMDHI--------------------YEIESYNGGDQGYLNEIFT----WWH---RIPKHMNFL 363 (521)
Q Consensus 324 ~f~~L~e~l--------------------~~~~sy~~~DQdiLN~vF~----~w~---~LP~~YN~l 363 (521)
..+-|-... .....+.-.||..|-++.- +|. .|-..|-+.
T Consensus 259 Sl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~ 325 (453)
T PLN03181 259 SLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFE 325 (453)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeee
Confidence 654432221 1122344579999998864 453 566666554
No 31
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=79.29 E-value=11 Score=36.02 Aligned_cols=85 Identities=22% Similarity=0.103 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhCC---CCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEE
Q 043696 205 AIAAAQSIRMAGS---TRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIF 281 (521)
Q Consensus 205 A~VL~~SLr~~ns---~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLY 281 (521)
+.-++.||.+... ++++ |+++++-+++..+.++++..+...+..+.++.... ...+-...+...+|-|++
T Consensus 15 l~~~l~sl~~q~~~~~~~ev-ivvd~~s~d~~~~~~~~~~~~~~~v~~i~~~~~~~------~~a~N~g~~~a~~d~v~~ 87 (249)
T cd02525 15 IEELLESLLNQSYPKDLIEI-IVVDGGSTDGTREIVQEYAAKDPRIRLIDNPKRIQ------SAGLNIGIRNSRGDIIIR 87 (249)
T ss_pred HHHHHHHHHhccCCCCccEE-EEEeCCCCccHHHHHHHHHhcCCeEEEEeCCCCCc------hHHHHHHHHHhCCCEEEE
Confidence 4555777776543 2333 34566666666666666653322233332221110 112223334457899999
Q ss_pred eecCeeccCC-chHhh
Q 043696 282 IDADLLILRN-IDFLF 296 (521)
Q Consensus 282 LDaD~LVl~n-LDeLF 296 (521)
||+|.++..+ +..+.
T Consensus 88 lD~D~~~~~~~l~~~~ 103 (249)
T cd02525 88 VDAHAVYPKDYILELV 103 (249)
T ss_pred ECCCccCCHHHHHHHH
Confidence 9999988544 44443
No 32
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=79.15 E-value=9.4 Score=33.35 Aligned_cols=86 Identities=22% Similarity=0.280 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHc---CceEEEEeeecCCcccccccchhhHHHHHHhccCC
Q 043696 200 VYVCGAIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAA---GWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTD 275 (521)
Q Consensus 200 ~Yl~gA~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~---g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~e 275 (521)
.|+. -++.||++. .....+ ++++++-+++..+.++++ +..+..+.. +... .....+-...+...
T Consensus 11 ~~l~---~~l~sl~~q~~~~~ei-ivvdd~s~d~~~~~~~~~~~~~~~i~~i~~---~~n~-----g~~~~~n~~~~~a~ 78 (169)
T PF00535_consen 11 EYLE---RTLESLLKQTDPDFEI-IVVDDGSTDETEEILEEYAESDPNIRYIRN---PENL-----GFSAARNRGIKHAK 78 (169)
T ss_dssp TTHH---HHHHHHHHHSGCEEEE-EEEECS-SSSHHHHHHHHHCCSTTEEEEEH---CCCS-----HHHHHHHHHHHH--
T ss_pred HHHH---HHHHHHhhccCCCEEE-EEeccccccccccccccccccccccccccc---cccc-----cccccccccccccc
Confidence 5554 555666665 233334 345555577777777776 333333221 1110 12224445556666
Q ss_pred cceEEEeecCeeccCC-chHhhc
Q 043696 276 YDKIIFIDADLLILRN-IDFLFE 297 (521)
Q Consensus 276 YDRVLYLDaD~LVl~n-LDeLF~ 297 (521)
.+-|+++|+|.++..+ |..|.+
T Consensus 79 ~~~i~~ld~D~~~~~~~l~~l~~ 101 (169)
T PF00535_consen 79 GEYILFLDDDDIISPDWLEELVE 101 (169)
T ss_dssp SSEEEEEETTEEE-TTHHHHHHH
T ss_pred eeEEEEeCCCceEcHHHHHHHHH
Confidence 7799999999999988 666654
No 33
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=76.67 E-value=18 Score=30.61 Aligned_cols=83 Identities=18% Similarity=0.096 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHcCce---EEEEeeecCCcccccccchhhHHHHHHhccCCcc
Q 043696 202 VCGAIAAAQSIRMAGS-TRDLVILVDETISDYHRGGLEAAGWK---IHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYD 277 (521)
Q Consensus 202 l~gA~VL~~SLr~~ns-~~dlvVLvtd~Is~e~~~~Lk~~g~~---v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYD 277 (521)
...+..++.|+.+... .+.++ +++++-+++..+.+++.... +..+....+. .....+-.+....++|
T Consensus 9 ~~~l~~~l~s~~~~~~~~~~i~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~~~~d 79 (156)
T cd00761 9 EPYLERCLESLLAQTYPNFEVI-VVDDGSTDGTLEILEEYAKKDPRVIRVINEENQ--------GLAAARNAGLKAARGE 79 (156)
T ss_pred HHHHHHHHHHHHhCCccceEEE-EEeCCCCccHHHHHHHHHhcCCCeEEEEecCCC--------ChHHHHHHHHHHhcCC
Confidence 4566778888887663 44444 45555556665555555322 2221111110 0111222333334799
Q ss_pred eEEEeecCeeccCCch
Q 043696 278 KIIFIDADLLILRNID 293 (521)
Q Consensus 278 RVLYLDaD~LVl~nLD 293 (521)
.++++|+|.++..+.-
T Consensus 80 ~v~~~d~D~~~~~~~~ 95 (156)
T cd00761 80 YILFLDADDLLLPDWL 95 (156)
T ss_pred EEEEECCCCccCccHH
Confidence 9999999999977643
No 34
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=75.88 E-value=18 Score=31.38 Aligned_cols=87 Identities=14% Similarity=0.103 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCceE-EEEeeecCCcccccccchhhHHHHHHhccCCcceEE
Q 043696 203 CGAIAAAQSIRMAG-STRDLVILVDETISDYHRGGLEAAGWKI-HTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKII 280 (521)
Q Consensus 203 ~gA~VL~~SLr~~n-s~~dlvVLvtd~Is~e~~~~Lk~~g~~v-~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVL 280 (521)
..+.-++.||+... +..+++ +++++-++...+.+++..... ..+..+..+... + ....+-...+....+-|+
T Consensus 10 ~~l~~~l~sl~~q~~~~~~ii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~~~-g----~~~~~n~~~~~~~~~~i~ 83 (180)
T cd06423 10 AVIERTIESLLALDYPKLEVI-VVDDGSTDDTLEILEELAALYIRRVLVVRDKENG-G----KAGALNAGLRHAKGDIVV 83 (180)
T ss_pred HHHHHHHHHHHhCCCCceEEE-EEeCCCccchHHHHHHHhccccceEEEEEecccC-C----chHHHHHHHHhcCCCEEE
Confidence 44556678887654 344444 455565666666666554321 001111111100 0 011222333444789999
Q ss_pred EeecCeeccCC-chHh
Q 043696 281 FIDADLLILRN-IDFL 295 (521)
Q Consensus 281 YLDaD~LVl~n-LDeL 295 (521)
++|+|.++..+ |..+
T Consensus 84 ~~D~D~~~~~~~l~~~ 99 (180)
T cd06423 84 VLDADTILEPDALKRL 99 (180)
T ss_pred EECCCCCcChHHHHHH
Confidence 99999999765 4434
No 35
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=75.16 E-value=27 Score=30.67 Aligned_cols=107 Identities=15% Similarity=0.145 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHhCC-CCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEE
Q 043696 203 CGAIAAAQSIRMAGS-TRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIF 281 (521)
Q Consensus 203 ~gA~VL~~SLr~~ns-~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLY 281 (521)
..+.-++.||..... ...+ ++++++-.++..+.+++....+.. +..+... .....+-...+..+++-|++
T Consensus 10 ~~l~~~l~sl~~~~~~~~~i-iivdd~s~~~~~~~~~~~~~~~~~---~~~~~~~-----g~~~a~n~~~~~~~~~~i~~ 80 (166)
T cd04186 10 EYLKACLDSLLAQTYPDFEV-IVVDNASTDGSVELLRELFPEVRL---IRNGENL-----GFGAGNNQGIREAKGDYVLL 80 (166)
T ss_pred HHHHHHHHHHHhccCCCeEE-EEEECCCCchHHHHHHHhCCCeEE---EecCCCc-----ChHHHhhHHHhhCCCCEEEE
Confidence 445667788876543 3344 445566666666777766532221 1111110 11223334444558999999
Q ss_pred eecCeeccCC-chHhhc----CCCeeeecCCCCCccceEEEEecC
Q 043696 282 IDADLLILRN-IDFLFE----MPEITATGNNATLFNSGVMVVEPS 321 (521)
Q Consensus 282 LDaD~LVl~n-LDeLF~----~p~iaAv~d~~~yFNSGVMVInPs 321 (521)
+|+|.++..+ +..+.+ .+.+.++... +.++.|+++.+
T Consensus 81 ~D~D~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 122 (166)
T cd04186 81 LNPDTVVEPGALLELLDAAEQDPDVGIVGPK---VSGAFLLVRRE 122 (166)
T ss_pred ECCCcEECccHHHHHHHHHHhCCCceEEEcc---CceeeEeeeHH
Confidence 9999998765 444433 1233333222 67777777754
No 36
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=74.77 E-value=21 Score=34.55 Aligned_cols=102 Identities=15% Similarity=0.113 Sum_probs=53.3
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHhC-CCCcE-EEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccch
Q 043696 185 RARREAYATILHSAHVYVCGAIAAAQSIRMAG-STRDL-VILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNE 262 (521)
Q Consensus 185 ~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~n-s~~dl-vVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~ 262 (521)
..++.+.+...+..+.+ +..+++||.... +...+ +|+++++-++...+.++++..+ .+..+..+... .
T Consensus 27 ~~~~isVvip~~n~~~~---l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~--~v~~i~~~~~~-----g 96 (251)
T cd06439 27 YLPTVTIIIPAYNEEAV---IEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIAREYADK--GVKLLRFPERR-----G 96 (251)
T ss_pred CCCEEEEEEecCCcHHH---HHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHHHhhC--cEEEEEcCCCC-----C
Confidence 34456666655544433 456667876543 33222 3455666666677777766432 12222111110 0
Q ss_pred hhHHHHHHhccCCcceEEEeecCeeccCC-chHhh
Q 043696 263 WNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLF 296 (521)
Q Consensus 263 ~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeLF 296 (521)
....+-...+....|-|+++|+|+++..+ +..|.
T Consensus 97 ~~~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~~l~ 131 (251)
T cd06439 97 KAAALNRALALATGEIVVFTDANALLDPDALRLLV 131 (251)
T ss_pred hHHHHHHHHHHcCCCEEEEEccccCcCHHHHHHHH
Confidence 11223333344456999999999999754 44443
No 37
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=74.22 E-value=14 Score=35.42 Aligned_cols=20 Identities=15% Similarity=0.290 Sum_probs=16.7
Q ss_pred ccCCcceEEEeecCeeccCC
Q 043696 272 QLTDYDKIIFIDADLLILRN 291 (521)
Q Consensus 272 ~L~eYDRVLYLDaD~LVl~n 291 (521)
+...+|-|+++|+|+++-.+
T Consensus 84 ~~a~~~~i~~~DaD~~~~~~ 103 (232)
T cd06437 84 KVAKGEYVAIFDADFVPPPD 103 (232)
T ss_pred HhCCCCEEEEEcCCCCCChH
Confidence 44679999999999998654
No 38
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=72.86 E-value=27 Score=36.07 Aligned_cols=101 Identities=7% Similarity=0.062 Sum_probs=54.5
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHhC-CCCcEE-EEECCCCCHHHHHHHHH-cCceEEEEeeecCCccccccc
Q 043696 184 ERARREAYATILHSAHVYVCGAIAAAQSIRMAG-STRDLV-ILVDETISDYHRGGLEA-AGWKIHTIQRIRNPKAERDAY 260 (521)
Q Consensus 184 ~~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~n-s~~dlv-VLvtd~Is~e~~~~Lk~-~g~~v~~V~~I~~p~~~~~~~ 260 (521)
....+.+...+.++ .|+.-.--.+.|-.++- ++++.+ .+.||.-+.--.-.|.. ...+++.|. . ...+
T Consensus 31 ~~n~tIgl~vfatG--kY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~lg~~r~~~V~~v~-----~--~~~W 101 (271)
T cd02515 31 KQNITIGLTVFAVG--KYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVELGPGRRLTVLKIA-----E--ESRW 101 (271)
T ss_pred hcCCEEEEEEEEec--cHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccccCCCceeEEEEec-----c--ccCC
Confidence 44556665554443 79988888888888763 444433 23344322100000000 011222221 1 1123
Q ss_pred chhhHHHHHHh-----c--cCCcceEEEeecCeeccCCch
Q 043696 261 NEWNYSKFRLW-----Q--LTDYDKIIFIDADLLILRNID 293 (521)
Q Consensus 261 ~~~ty~KL~lw-----~--L~eYDRVLYLDaD~LVl~nLD 293 (521)
...+..|+.++ + +.++|-+.++|+||++.+.+.
T Consensus 102 ~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig 141 (271)
T cd02515 102 QDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFG 141 (271)
T ss_pred cHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCC
Confidence 33456666666 2 258999999999999999875
No 39
>PRK15384 type III secretion system protein; Provisional
Probab=70.30 E-value=3.6 Score=41.73 Aligned_cols=47 Identities=19% Similarity=0.400 Sum_probs=36.3
Q ss_pred cceEEEeecCeeccCCchHhhcCCCeeeec---CCCCCccceEEEEecCH
Q 043696 276 YDKIIFIDADLLILRNIDFLFEMPEITATG---NNATLFNSGVMVVEPSN 322 (521)
Q Consensus 276 YDRVLYLDaD~LVl~nLDeLF~~p~iaAv~---d~~~yFNSGVMVInPs~ 322 (521)
-.-+||||+|||+.+.|.-|+.-+.|+.-. |...-+-.|.+++|.+.
T Consensus 216 ~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 265 (336)
T PRK15384 216 NSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNN 265 (336)
T ss_pred CCceEEeeccceeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 367999999999999999998877777543 34445566888888764
No 40
>PRK15383 type III secretion system protein; Provisional
Probab=70.09 E-value=3.5 Score=41.81 Aligned_cols=47 Identities=23% Similarity=0.394 Sum_probs=36.4
Q ss_pred cceEEEeecCeeccCCchHhhcCCCeeeec---CCCCCccceEEEEecCH
Q 043696 276 YDKIIFIDADLLILRNIDFLFEMPEITATG---NNATLFNSGVMVVEPSN 322 (521)
Q Consensus 276 YDRVLYLDaD~LVl~nLDeLF~~p~iaAv~---d~~~yFNSGVMVInPs~ 322 (521)
-.-+||||+|||+.+.|.-|+.-+.|+.-. |...-+-.|.+++|.+.
T Consensus 219 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 268 (335)
T PRK15383 219 GGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSE 268 (335)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 367999999999999999998877777543 34445566888888764
No 41
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=69.93 E-value=3.9 Score=41.47 Aligned_cols=47 Identities=26% Similarity=0.505 Sum_probs=36.5
Q ss_pred cceEEEeecCeeccCCchHhhcCCCeeeec---CCCCCccceEEEEecCH
Q 043696 276 YDKIIFIDADLLILRNIDFLFEMPEITATG---NNATLFNSGVMVVEPSN 322 (521)
Q Consensus 276 YDRVLYLDaD~LVl~nLDeLF~~p~iaAv~---d~~~yFNSGVMVInPs~ 322 (521)
-+-+||||+|||+.+.|.-|+.-+.|+.-. |...-+-.|.+++|.+.
T Consensus 211 ~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 260 (326)
T PRK15382 211 CEGCIYLDADMIITDKLGVLYAPDGIAVHVDCNDDSKSLENGAIVVNRSN 260 (326)
T ss_pred CCceEEeecceeeecccccEEcCCceEEEEEecCCccccccceEEEccCC
Confidence 467999999999999999998877777543 34455666888888764
No 42
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=69.51 E-value=26 Score=32.87 Aligned_cols=63 Identities=10% Similarity=0.123 Sum_probs=49.0
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHc--CceEEEEee
Q 043696 184 ERARREAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAA--GWKIHTIQR 249 (521)
Q Consensus 184 ~~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~--g~~v~~V~~ 249 (521)
...+..++||... ++++..+.-+++||++..|+.++++ ++=++++...+.|++. +.+++..+.
T Consensus 57 ~n~~~vvfVSa~S--~~h~~~~~~~i~si~~~~P~~k~il-Y~LgL~~~~i~~L~~~~~n~evr~Fn~ 121 (142)
T PF07801_consen 57 KNSSDVVFVSATS--DNHFNESMKSISSIRKFYPNHKIIL-YDLGLSEEQIKKLKKNFCNVEVRKFNF 121 (142)
T ss_pred ccCCccEEEEEec--chHHHHHHHHHHHHHHHCCCCcEEE-EeCCCCHHHHHHHHhcCCceEEEECCC
Confidence 3566788898653 5799999999999999999988764 6679999999999873 455555443
No 43
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=68.61 E-value=28 Score=31.66 Aligned_cols=85 Identities=15% Similarity=0.026 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEE
Q 043696 203 CGAIAAAQSIRMAG-STRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIF 281 (521)
Q Consensus 203 ~gA~VL~~SLr~~n-s~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLY 281 (521)
..+..++.||.+.. ++.. +++++++-+++..+.+++....++.+... +... ....+-...+....|-|++
T Consensus 11 ~~l~~~l~sl~~q~~~~~e-vivvDd~s~d~~~~~~~~~~~~~~~~~~~--~~~g------~~~a~n~~~~~a~~~~v~~ 81 (202)
T cd06433 11 ETLEETIDSVLSQTYPNIE-YIVIDGGSTDGTVDIIKKYEDKITYWISE--PDKG------IYDAMNKGIALATGDIIGF 81 (202)
T ss_pred HHHHHHHHHHHhCCCCCce-EEEEeCCCCccHHHHHHHhHhhcEEEEec--CCcC------HHHHHHHHHHHcCCCEEEE
Confidence 44556677876543 3333 34556666666777777665442222211 1110 1112223344456789999
Q ss_pred eecCeeccCC-chHhh
Q 043696 282 IDADLLILRN-IDFLF 296 (521)
Q Consensus 282 LDaD~LVl~n-LDeLF 296 (521)
||+|.++..+ +..+.
T Consensus 82 ld~D~~~~~~~~~~~~ 97 (202)
T cd06433 82 LNSDDTLLPGALLAVV 97 (202)
T ss_pred eCCCcccCchHHHHHH
Confidence 9999998765 55544
No 44
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=67.33 E-value=30 Score=32.24 Aligned_cols=86 Identities=16% Similarity=0.154 Sum_probs=45.0
Q ss_pred HHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhH-HHHHHhccCCcceEEEe
Q 043696 205 AIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNY-SKFRLWQLTDYDKIIFI 282 (521)
Q Consensus 205 A~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty-~KL~lw~L~eYDRVLYL 282 (521)
..-++.||.+. .+... +|+++++-++...+.+++.+.... +..+..+.... .....+. .+... ..++|-++++
T Consensus 12 l~~~l~sl~~q~~~~~e-iiivD~~s~d~t~~~~~~~~~~~~-i~~~~~~~n~g-~~~~~n~~~~~a~--~~~~d~v~~l 86 (202)
T cd04185 12 LKECLDALLAQTRPPDH-IIVIDNASTDGTAEWLTSLGDLDN-IVYLRLPENLG-GAGGFYEGVRRAY--ELGYDWIWLM 86 (202)
T ss_pred HHHHHHHHHhccCCCce-EEEEECCCCcchHHHHHHhcCCCc-eEEEECccccc-hhhHHHHHHHHHh--ccCCCEEEEe
Confidence 44566777653 33344 455666766677777777664321 22222222111 0000110 11111 3578999999
Q ss_pred ecCeeccCC-chHh
Q 043696 283 DADLLILRN-IDFL 295 (521)
Q Consensus 283 DaD~LVl~n-LDeL 295 (521)
|+|.++..+ ++.|
T Consensus 87 d~D~~~~~~~l~~l 100 (202)
T cd04185 87 DDDAIPDPDALEKL 100 (202)
T ss_pred CCCCCcChHHHHHH
Confidence 999999765 3334
No 45
>PRK10063 putative glycosyl transferase; Provisional
Probab=65.00 E-value=64 Score=32.19 Aligned_cols=94 Identities=13% Similarity=0.085 Sum_probs=47.6
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHh--CCCCcE-EEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhH
Q 043696 189 EAYATILHSAHVYVCGAIAAAQSIRMA--GSTRDL-VILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNY 265 (521)
Q Consensus 189 ~AyVTlLt~dd~Yl~gA~VL~~SLr~~--ns~~dl-vVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty 265 (521)
...|+.......++. -++.||... .+..++ +|+++++-++.+.+.+++..... .+..+..+.. + ..-
T Consensus 3 vSVIi~~yN~~~~l~---~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~~~~~~~-~i~~i~~~~~--G----~~~ 72 (248)
T PRK10063 3 LSVITVAFRNLEGIV---KTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLENLNGIF-NLRFVSEPDN--G----IYD 72 (248)
T ss_pred EEEEEEeCCCHHHHH---HHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHHHhcccC-CEEEEECCCC--C----HHH
Confidence 345555454445544 445555432 122234 34566667777777888764211 1222222211 1 001
Q ss_pred HHHHHhccCCcceEEEeecCeeccCCc
Q 043696 266 SKFRLWQLTDYDKIIFIDADLLILRNI 292 (521)
Q Consensus 266 ~KL~lw~L~eYDRVLYLDaD~LVl~nL 292 (521)
.+=...+....|-|++||+|-++..+.
T Consensus 73 A~N~Gi~~a~g~~v~~ld~DD~~~~~~ 99 (248)
T PRK10063 73 AMNKGIAMAQGRFALFLNSGDIFHQDA 99 (248)
T ss_pred HHHHHHHHcCCCEEEEEeCCcccCcCH
Confidence 111222334578999999998887763
No 46
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=64.53 E-value=36 Score=40.61 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=47.2
Q ss_pred hCCCCcE-EEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEEeecCeeccCCc-
Q 043696 215 AGSTRDL-VILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNI- 292 (521)
Q Consensus 215 ~ns~~dl-vVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLYLDaD~LVl~nL- 292 (521)
..+..++ +++++|+-+++..+..++.+++++.. -.+...+.++.| ...+..+.|-|+++|||.++..|.
T Consensus 287 dYP~~k~EViVVDDgS~D~t~~la~~~~v~yI~R--~~n~~gKAGnLN-------~aL~~a~GEyIavlDAD~ip~pdfL 357 (852)
T PRK11498 287 DWPKDKLNIWILDDGGREEFRQFAQEVGVKYIAR--PTHEHAKAGNIN-------NALKYAKGEFVAIFDCDHVPTRSFL 357 (852)
T ss_pred cCCCCceEEEEEeCCCChHHHHHHHHCCcEEEEe--CCCCcchHHHHH-------HHHHhCCCCEEEEECCCCCCChHHH
Confidence 3443334 34567777788888888887665431 111111111111 111235789999999999997763
Q ss_pred hH----hhcCCCeeeecC
Q 043696 293 DF----LFEMPEITATGN 306 (521)
Q Consensus 293 De----LF~~p~iaAv~d 306 (521)
.. ++.-|.++.+..
T Consensus 358 ~~~V~~f~~dP~VglVQt 375 (852)
T PRK11498 358 QMTMGWFLKDKKLAMMQT 375 (852)
T ss_pred HHHHHHHHhCCCeEEEEc
Confidence 32 234456776643
No 47
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=64.50 E-value=35 Score=32.02 Aligned_cols=20 Identities=30% Similarity=0.325 Sum_probs=16.3
Q ss_pred ccCCcceEEEeecCeeccCC
Q 043696 272 QLTDYDKIIFIDADLLILRN 291 (521)
Q Consensus 272 ~L~eYDRVLYLDaD~LVl~n 291 (521)
....+|-|+++|+|.++..+
T Consensus 79 ~~~~~d~i~~~D~D~~~~~~ 98 (229)
T cd04192 79 KAAKGDWIVTTDADCVVPSN 98 (229)
T ss_pred HHhcCCEEEEECCCcccCHH
Confidence 34568999999999988654
No 48
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=63.32 E-value=16 Score=34.36 Aligned_cols=108 Identities=8% Similarity=0.020 Sum_probs=50.4
Q ss_pred HHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHcC-----ceEEEEeeecCCcccccccchhhHHHHHHhccCCcce
Q 043696 205 AIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAAG-----WKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDK 278 (521)
Q Consensus 205 A~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~g-----~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDR 278 (521)
+.-++.||.+. .+.++++| ++++-++++.+.++++. .+++.+. .+... . .+......-...+...+|=
T Consensus 16 l~~~L~sl~~q~~~~~eiiv-Vdd~s~d~t~~~~~~~~~~~~~~~~~~~~---~~~~~-g-~~~~~~~~n~g~~~a~~d~ 89 (196)
T cd02520 16 LYENLESFFQQDYPKYEILF-CVQDEDDPAIPVVRKLIAKYPNVDARLLI---GGEKV-G-INPKVNNLIKGYEEARYDI 89 (196)
T ss_pred HHHHHHHHHhccCCCeEEEE-EeCCCcchHHHHHHHHHHHCCCCcEEEEe---cCCcC-C-CCHhHHHHHHHHHhCCCCE
Confidence 45667787753 34555554 44555555555555431 1221111 11100 0 0000011112344567899
Q ss_pred EEEeecCeeccCC-chHhhcC---CCeeeecCCCCCccceEEEEec
Q 043696 279 IIFIDADLLILRN-IDFLFEM---PEITATGNNATLFNSGVMVVEP 320 (521)
Q Consensus 279 VLYLDaD~LVl~n-LDeLF~~---p~iaAv~d~~~yFNSGVMVInP 320 (521)
++++|+|+++-.+ |..+... +.++++... ..+++-|+++.
T Consensus 90 i~~~D~D~~~~~~~l~~l~~~~~~~~~~~v~~~--~~~g~~~~~r~ 133 (196)
T cd02520 90 LVISDSDISVPPDYLRRMVAPLMDPGVGLVTCL--CAFGKSMALRR 133 (196)
T ss_pred EEEECCCceEChhHHHHHHHHhhCCCCCeEEee--cccCceeeeEH
Confidence 9999999987543 3333322 234333222 44445555553
No 49
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=62.25 E-value=23 Score=35.34 Aligned_cols=79 Identities=23% Similarity=0.389 Sum_probs=51.4
Q ss_pred cCCcceEEEeecCeeccCC---chHhhcCC-CeeeecC-CCCCccceEEEEecCHHHHHHHHHHHh-h---cCCCCCCch
Q 043696 273 LTDYDKIIFIDADLLILRN---IDFLFEMP-EITATGN-NATLFNSGVMVVEPSNCTFQLLMDHIY-E---IESYNGGDQ 343 (521)
Q Consensus 273 L~eYDRVLYLDaD~LVl~n---LDeLF~~p-~iaAv~d-~~~yFNSGVMVInPs~~~f~~L~e~l~-~---~~sy~~~DQ 343 (521)
|.+||=||+|||||-|..+ |.+..+-. ++.--.. ...-+.+|--+++.+...-+-|.+++. + ..++.|.|-
T Consensus 39 L~~~~~vlflDaDigVvNp~~~iEefid~~~Di~fydR~~n~Ei~agsYlvkNT~~~~~fl~~~a~~E~~lP~sfhGtDN 118 (222)
T PF03314_consen 39 LPEYDWVLFLDADIGVVNPNRRIEEFIDEGYDIIFYDRFFNWEIAAGSYLVKNTEYSRDFLKEWADYEFKLPNSFHGTDN 118 (222)
T ss_pred hccCCEEEEEcCCceeecCcccHHHhcCCCCcEEEEecccchhhhhccceeeCCHHHHHHHHHHhhhCccCCCccccCcc
Confidence 5789999999999999975 44444211 1111100 112345777788888777666666653 1 347788999
Q ss_pred hHHHHhcc
Q 043696 344 GYLNEIFT 351 (521)
Q Consensus 344 diLN~vF~ 351 (521)
|.|-.+..
T Consensus 119 GAlH~~L~ 126 (222)
T PF03314_consen 119 GALHIFLA 126 (222)
T ss_pred HHHHHHHH
Confidence 99988775
No 50
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=61.85 E-value=57 Score=30.16 Aligned_cols=81 Identities=17% Similarity=0.112 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEECCCC-CHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEE
Q 043696 204 GAIAAAQSIRMAG-STRDLVILVDETI-SDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIF 281 (521)
Q Consensus 204 gA~VL~~SLr~~n-s~~dlvVLvtd~I-s~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLY 281 (521)
.+.-++.||.... +...+ |+++++- ++...+.++++..+.- +..+..+... .....+-......+.|-|++
T Consensus 14 ~l~~~l~Sl~~q~~~~~ei-iivdd~ss~d~t~~~~~~~~~~~~-i~~i~~~~n~-----G~~~a~N~g~~~a~gd~i~~ 86 (201)
T cd04195 14 FLREALESILKQTLPPDEV-VLVKDGPVTQSLNEVLEEFKRKLP-LKVVPLEKNR-----GLGKALNEGLKHCTYDWVAR 86 (201)
T ss_pred HHHHHHHHHHhcCCCCcEE-EEEECCCCchhHHHHHHHHHhcCC-eEEEEcCccc-----cHHHHHHHHHHhcCCCEEEE
Confidence 4456677776643 33444 4455554 5555555554321110 2222222110 11223334445567889999
Q ss_pred eecCeeccCC
Q 043696 282 IDADLLILRN 291 (521)
Q Consensus 282 LDaD~LVl~n 291 (521)
||+|.++..+
T Consensus 87 lD~Dd~~~~~ 96 (201)
T cd04195 87 MDTDDISLPD 96 (201)
T ss_pred eCCccccCcH
Confidence 9999988754
No 51
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=61.20 E-value=54 Score=30.27 Aligned_cols=83 Identities=17% Similarity=0.178 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhC-C--CCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHh-ccCCcceE
Q 043696 204 GAIAAAQSIRMAG-S--TRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLW-QLTDYDKI 279 (521)
Q Consensus 204 gA~VL~~SLr~~n-s--~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw-~L~eYDRV 279 (521)
.+..++.||.+.. + .+.+ ++++++-++++.+.+++.+..++... ......+. ...++.--.+- .-..+|-|
T Consensus 11 ~i~~~l~sl~~~~~p~~~~ei-ivvdd~s~D~t~~~~~~~~~~~~~~~--~~~~~gk~--~aln~g~~~a~~~~~~~d~v 85 (183)
T cd06438 11 VIGNTVRSLKAQDYPRELYRI-FVVADNCTDDTAQVARAAGATVLERH--DPERRGKG--YALDFGFRHLLNLADDPDAV 85 (183)
T ss_pred HHHHHHHHHHhcCCCCcccEE-EEEeCCCCchHHHHHHHcCCeEEEeC--CCCCCCHH--HHHHHHHHHHHhcCCCCCEE
Confidence 3445667776543 2 2333 44566667777888888777643221 11111110 00010000010 01358999
Q ss_pred EEeecCeeccCC
Q 043696 280 IFIDADLLILRN 291 (521)
Q Consensus 280 LYLDaD~LVl~n 291 (521)
+++|+|+++-.+
T Consensus 86 ~~~DaD~~~~p~ 97 (183)
T cd06438 86 VVFDADNLVDPN 97 (183)
T ss_pred EEEcCCCCCChh
Confidence 999999999644
No 52
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=60.64 E-value=49 Score=32.13 Aligned_cols=83 Identities=12% Similarity=-0.003 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhC-CCCcE-EEEECCCCCHHHHHHHHHcCce-EEEEeeecCCcccccccchhhHHHHHHhccCCcceEE
Q 043696 204 GAIAAAQSIRMAG-STRDL-VILVDETISDYHRGGLEAAGWK-IHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKII 280 (521)
Q Consensus 204 gA~VL~~SLr~~n-s~~dl-vVLvtd~Is~e~~~~Lk~~g~~-v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVL 280 (521)
...-++.||.... +...+ +++++++-++.+.+.++++... ...+..+.+... .. .....=...+....|-|+
T Consensus 15 ~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~~~~~~~i~~~~~~~~-~G----~~~a~n~g~~~a~gd~i~ 89 (241)
T cd06427 15 VLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALRLPSIFRVVVVPPSQP-RT----KPKACNYALAFARGEYVV 89 (241)
T ss_pred HHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhccCCCeeEEEecCCCC-Cc----hHHHHHHHHHhcCCCEEE
Confidence 3456677776532 22223 2344555567777777776421 112222221110 00 011111233446679999
Q ss_pred EeecCeeccCC
Q 043696 281 FIDADLLILRN 291 (521)
Q Consensus 281 YLDaD~LVl~n 291 (521)
++|+|+++-.+
T Consensus 90 ~~DaD~~~~~~ 100 (241)
T cd06427 90 IYDAEDAPDPD 100 (241)
T ss_pred EEcCCCCCChH
Confidence 99999998765
No 53
>PRK11204 N-glycosyltransferase; Provisional
Probab=60.40 E-value=40 Score=35.84 Aligned_cols=108 Identities=10% Similarity=0.061 Sum_probs=54.1
Q ss_pred CCCEEEEEEeecChhhHHHHHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHc---CceEEEEeeecCCcccccccc
Q 043696 186 ARREAYATILHSAHVYVCGAIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAA---GWKIHTIQRIRNPKAERDAYN 261 (521)
Q Consensus 186 ~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~---g~~v~~V~~I~~p~~~~~~~~ 261 (521)
.++.+.+...+..+.. ..-++.|+.+. .++++++ +++|+-+++..+.+++. ..++..+..- +...+
T Consensus 53 ~p~vsViIp~yne~~~---i~~~l~sl~~q~yp~~eii-VvdD~s~d~t~~~l~~~~~~~~~v~~i~~~--~n~Gk---- 122 (420)
T PRK11204 53 YPGVSILVPCYNEGEN---VEETISHLLALRYPNYEVI-AINDGSSDNTGEILDRLAAQIPRLRVIHLA--ENQGK---- 122 (420)
T ss_pred CCCEEEEEecCCCHHH---HHHHHHHHHhCCCCCeEEE-EEECCCCccHHHHHHHHHHhCCcEEEEEcC--CCCCH----
Confidence 3455655555544333 44556676653 4545544 45666566666555543 2223322211 11111
Q ss_pred hhhHHHHHHhccCCcceEEEeecCeeccCC-chHh---h-cCCCeeeec
Q 043696 262 EWNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFL---F-EMPEITATG 305 (521)
Q Consensus 262 ~~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeL---F-~~p~iaAv~ 305 (521)
.-..=...+..++|-|+++|+|.++-.+ +..+ | +-|.++++.
T Consensus 123 --a~aln~g~~~a~~d~i~~lDaD~~~~~d~L~~l~~~~~~~~~v~~v~ 169 (420)
T PRK11204 123 --ANALNTGAAAARSEYLVCIDGDALLDPDAAAYMVEHFLHNPRVGAVT 169 (420)
T ss_pred --HHHHHHHHHHcCCCEEEEECCCCCCChhHHHHHHHHHHhCCCeEEEE
Confidence 0011112233678999999999998765 3333 3 234565554
No 54
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=60.08 E-value=78 Score=29.87 Aligned_cols=81 Identities=11% Similarity=0.042 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhC-CC--CcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEE
Q 043696 205 AIAAAQSIRMAG-ST--RDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIF 281 (521)
Q Consensus 205 A~VL~~SLr~~n-s~--~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLY 281 (521)
..-++.||+... +. +.+ ++++++-+++..+.+++++.+. .+..+..+.... .. ....-...+...+|-|++
T Consensus 17 l~~~l~sl~~q~~~~~~~ei-ivvdd~s~d~t~~~~~~~~~~~-~~~~~~~~~~~~--~~--~~~~n~~~~~a~~d~i~~ 90 (234)
T cd06421 17 VRKTLRAALAIDYPHDKLRV-YVLDDGRRPELRALAAELGVEY-GYRYLTRPDNRH--AK--AGNLNNALAHTTGDFVAI 90 (234)
T ss_pred HHHHHHHHHhcCCCcccEEE-EEEcCCCchhHHHHHHHhhccc-CceEEEeCCCCC--Cc--HHHHHHHHHhCCCCEEEE
Confidence 455677777532 33 233 4567776777777777776521 111111111100 00 111123334457999999
Q ss_pred eecCeeccCC
Q 043696 282 IDADLLILRN 291 (521)
Q Consensus 282 LDaD~LVl~n 291 (521)
||+|.++-.+
T Consensus 91 lD~D~~~~~~ 100 (234)
T cd06421 91 LDADHVPTPD 100 (234)
T ss_pred EccccCcCcc
Confidence 9999999654
No 55
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=56.35 E-value=78 Score=27.20 Aligned_cols=84 Identities=19% Similarity=0.073 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceE
Q 043696 201 YVCGAIAAAQSIRMAG-STRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKI 279 (521)
Q Consensus 201 Yl~gA~VL~~SLr~~n-s~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRV 279 (521)
.-..+..++.|+.+.. .... +|+++++-++.+.+.+++...+...+.....+.. ....+.+-.......-+-|
T Consensus 14 ~~~~l~~~l~s~~~q~~~~~e-iivvddgs~d~t~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~~~ 87 (291)
T COG0463 14 EEEYLPEALESLLNQTYKDFE-IIVVDDGSTDGTTEIAIEYGAKDVRVIRLINERN-----GGLGAARNAGLEYARGDYI 87 (291)
T ss_pred hhhhHHHHHHHHHhhhhcceE-EEEEeCCCCCChHHHHHHHhhhcceEEEeecccC-----CChHHHHHhhHHhccCCEE
Confidence 3355666777877643 3334 6677887777777777766554211111100000 0112333333333333999
Q ss_pred EEeecCeeccCC
Q 043696 280 IFIDADLLILRN 291 (521)
Q Consensus 280 LYLDaD~LVl~n 291 (521)
+++|+|.+ ..+
T Consensus 88 ~~~d~d~~-~~~ 98 (291)
T COG0463 88 VFLDADDQ-HPP 98 (291)
T ss_pred EEEccCCC-CCH
Confidence 99999999 665
No 56
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=56.35 E-value=79 Score=31.93 Aligned_cols=87 Identities=16% Similarity=0.086 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhCCCC-c-EEEEECCCCCHHHHHHHHH-----cCceEEEEeeecCCcccccccchhhHHHHHHhccCC
Q 043696 203 CGAIAAAQSIRMAGSTR-D-LVILVDETISDYHRGGLEA-----AGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTD 275 (521)
Q Consensus 203 ~gA~VL~~SLr~~ns~~-d-lvVLvtd~Is~e~~~~Lk~-----~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~e 275 (521)
..+.-++.||....+.. . -+|+++++-++.+...+.+ ....++ .+..+... ...-.+=...+...
T Consensus 12 ~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~~v~---vi~~~~n~-----G~~~a~N~g~~~A~ 83 (299)
T cd02510 12 STLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLPKVK---VLRLKKRE-----GLIRARIAGARAAT 83 (299)
T ss_pred HHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCCcEE---EEEcCCCC-----CHHHHHHHHHHHcc
Confidence 56667788888654432 2 3556776666655555432 122222 22222110 00112222223356
Q ss_pred cceEEEeecCeeccCC-chHhhc
Q 043696 276 YDKIIFIDADLLILRN-IDFLFE 297 (521)
Q Consensus 276 YDRVLYLDaD~LVl~n-LDeLF~ 297 (521)
.|-|++||+|+++..+ |..|.+
T Consensus 84 gd~i~fLD~D~~~~~~wL~~ll~ 106 (299)
T cd02510 84 GDVLVFLDSHCEVNVGWLEPLLA 106 (299)
T ss_pred CCEEEEEeCCcccCccHHHHHHH
Confidence 7999999999999655 555553
No 57
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=54.89 E-value=83 Score=30.46 Aligned_cols=73 Identities=19% Similarity=0.137 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEEeec
Q 043696 205 AIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIFIDA 284 (521)
Q Consensus 205 A~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLYLDa 284 (521)
..-++.||... .+-+|+++++-++.+.+.+++.+.+++.. .+.. ....+=+..+....|-|++||+
T Consensus 15 l~~~l~sl~~~---~~eiivvD~gStD~t~~i~~~~~~~v~~~---~~~g--------~~~~~n~~~~~a~~d~vl~lDa 80 (229)
T cd02511 15 IERCLESVKWA---VDEIIVVDSGSTDRTVEIAKEYGAKVYQR---WWDG--------FGAQRNFALELATNDWVLSLDA 80 (229)
T ss_pred HHHHHHHHhcc---cCEEEEEeCCCCccHHHHHHHcCCEEEEC---CCCC--------hHHHHHHHHHhCCCCEEEEEeC
Confidence 34455666533 13455677777777788888888776543 1110 1112333344456789999999
Q ss_pred CeeccCC
Q 043696 285 DLLILRN 291 (521)
Q Consensus 285 D~LVl~n 291 (521)
|.++..+
T Consensus 81 D~~~~~~ 87 (229)
T cd02511 81 DERLTPE 87 (229)
T ss_pred CcCcCHH
Confidence 9988655
No 58
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=54.60 E-value=80 Score=29.17 Aligned_cols=88 Identities=23% Similarity=0.137 Sum_probs=44.7
Q ss_pred HHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHcCceE-EEEeeecCCcccccccchhhHHHHHHhccCCcceEEEe
Q 043696 205 AIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAAGWKI-HTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIFI 282 (521)
Q Consensus 205 A~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~g~~v-~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLYL 282 (521)
+.-++.||... .++..++ +++++-++++.+.+++...+. ..+..+..+... + ..-..-........|-|++|
T Consensus 13 l~~~l~sl~~q~~~~~eii-VvddgS~d~t~~~~~~~~~~~~~~~~~~~~~~~~-G----~~~~~n~g~~~~~g~~v~~l 86 (214)
T cd04196 13 LREQLDSILAQTYKNDELI-ISDDGSTDGTVEIIKEYIDKDPFIIILIRNGKNL-G----VARNFESLLQAADGDYVFFC 86 (214)
T ss_pred HHHHHHHHHhCcCCCeEEE-EEeCCCCCCcHHHHHHHHhcCCceEEEEeCCCCc-c----HHHHHHHHHHhCCCCEEEEE
Confidence 34566777653 3433343 455555556666666553321 111112111110 0 01111122345678999999
Q ss_pred ecCeeccCC-chHhhcC
Q 043696 283 DADLLILRN-IDFLFEM 298 (521)
Q Consensus 283 DaD~LVl~n-LDeLF~~ 298 (521)
|+|.++..+ |..+.+.
T Consensus 87 d~Dd~~~~~~l~~~~~~ 103 (214)
T cd04196 87 DQDDIWLPDKLERLLKA 103 (214)
T ss_pred CCCcccChhHHHHHHHH
Confidence 999888766 6666653
No 59
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=54.25 E-value=69 Score=30.02 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEEe
Q 043696 204 GAIAAAQSIRMAG-STRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIFI 282 (521)
Q Consensus 204 gA~VL~~SLr~~n-s~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLYL 282 (521)
.+.-++.||.... +...+ |+++++-+++..+.+++.+..++. .+... ...+-........+-|+++
T Consensus 13 ~l~~~l~sl~~q~~~~~ev-ivvdd~s~d~~~~~~~~~~~~~~~-----~~~g~-------~~a~n~g~~~a~~~~i~~~ 79 (221)
T cd02522 13 NLPRLLASLRRLNPLPLEI-IVVDGGSTDGTVAIARSAGVVVIS-----SPKGR-------ARQMNAGAAAARGDWLLFL 79 (221)
T ss_pred HHHHHHHHHHhccCCCcEE-EEEeCCCCccHHHHHhcCCeEEEe-----CCcCH-------HHHHHHHHHhccCCEEEEE
Confidence 4456677776643 33444 445666666666667663332221 11111 1122223334457899999
Q ss_pred ecCeeccCC
Q 043696 283 DADLLILRN 291 (521)
Q Consensus 283 DaD~LVl~n 291 (521)
|+|..+..+
T Consensus 80 D~D~~~~~~ 88 (221)
T cd02522 80 HADTRLPPD 88 (221)
T ss_pred cCCCCCChh
Confidence 999988654
No 60
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=54.09 E-value=94 Score=33.08 Aligned_cols=100 Identities=12% Similarity=0.070 Sum_probs=50.0
Q ss_pred EeecChhhHHHHHHHHHHHHHhCC---CCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccc------cccch-h
Q 043696 194 ILHSAHVYVCGAIAAAQSIRMAGS---TRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAER------DAYNE-W 263 (521)
Q Consensus 194 lLt~dd~Yl~gA~VL~~SLr~~ns---~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~------~~~~~-~ 263 (521)
+++.| -...+.-++.||++..| ..+++|. .|+-.++..+.++..+..+..+.......... ..+.. .
T Consensus 6 v~ayN--Rp~~l~r~LesLl~~~p~~~~~~liIs-~DG~~~~~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~~~y~~ia 82 (334)
T cd02514 6 VIACN--RPDYLRRMLDSLLSYRPSAEKFPIIVS-QDGGYEEVADVAKSFGDGVTHIQHPPISIKNVNPPHKFQGYYRIA 82 (334)
T ss_pred EEecC--CHHHHHHHHHHHHhccccCCCceEEEE-eCCCchHHHHHHHhhccccEEEEcccccccccCcccccchhhHHH
Confidence 34444 34456667788877642 3344444 45555556666666643333332211100000 01111 0
Q ss_pred h---HHHHHHhccCCcceEEEeecCeeccCCchHhh
Q 043696 264 N---YSKFRLWQLTDYDKIIFIDADLLILRNIDFLF 296 (521)
Q Consensus 264 t---y~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF 296 (521)
. +..=.+++..+|++||.||.|+++--+.=+.|
T Consensus 83 ~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf 118 (334)
T cd02514 83 RHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYF 118 (334)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHH
Confidence 1 11122333347999999999999987744444
No 61
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=53.76 E-value=7.2 Score=33.64 Aligned_cols=87 Identities=13% Similarity=0.133 Sum_probs=44.2
Q ss_pred HHHHHHHHhCCCCcEEEEECCCC----CHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHH-hccCCcceEEE
Q 043696 207 AAAQSIRMAGSTRDLVILVDETI----SDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRL-WQLTDYDKIIF 281 (521)
Q Consensus 207 VL~~SLr~~ns~~dlvVLvtd~I----s~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~l-w~L~eYDRVLY 281 (521)
-.+.|..+++|++.++++.+... .....+.|.+....+.....-..+..........-+.|+.+ +... =||
T Consensus 6 ~~i~s~~~~nP~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~sD~~R~~~L~~~G----GiY 81 (103)
T PF04488_consen 6 CSIESWARHNPDYEYILWTDESDNVRVKRIDIEFLFEKTPWFLELYNKWEPGRYPNYAHKSDLLRYLVLYKYG----GIY 81 (103)
T ss_pred HHHHHHHHHCCCCEEEEEECCCcchhhhHHHHHHHHhCChHHHHHHhhhhcccccchHHHHHHHHHHHHHHcC----cEE
Confidence 46788899999999888765433 22223333332110000000000000000001123555443 3323 389
Q ss_pred eecCeeccCCc-hHhhc
Q 043696 282 IDADLLILRNI-DFLFE 297 (521)
Q Consensus 282 LDaD~LVl~nL-DeLF~ 297 (521)
+|.|+++++++ +.+..
T Consensus 82 ~D~D~~~~rpl~~~~~~ 98 (103)
T PF04488_consen 82 LDLDVICLRPLDDPWLP 98 (103)
T ss_pred EeCccccCcchhhhhhc
Confidence 99999999999 87764
No 62
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=51.80 E-value=1.1e+02 Score=29.09 Aligned_cols=92 Identities=14% Similarity=0.098 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHc--CceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEE
Q 043696 203 CGAIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAA--GWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKII 280 (521)
Q Consensus 203 ~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~--g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVL 280 (521)
....-++.||.+.. ..+++ +++++-+++....|+.. ...++.+ ..+... .....-...+...+|-|+
T Consensus 14 ~~l~~~l~sl~~q~-~~eii-vvdd~s~d~~~~~l~~~~~~~~~~v~---~~~~~g------~~~a~n~g~~~a~~d~v~ 82 (235)
T cd06434 14 DVFRECLRSILRQK-PLEII-VVTDGDDEPYLSILSQTVKYGGIFVI---TVPHPG------KRRALAEGIRHVTTDIVV 82 (235)
T ss_pred HHHHHHHHHHHhCC-CCEEE-EEeCCCChHHHHHHHhhccCCcEEEE---ecCCCC------hHHHHHHHHHHhCCCEEE
Confidence 44555677777654 45554 44556666666665332 1112111 111111 011111233345799999
Q ss_pred EeecCeeccCC-chHhhc---CCCeeeec
Q 043696 281 FIDADLLILRN-IDFLFE---MPEITATG 305 (521)
Q Consensus 281 YLDaD~LVl~n-LDeLF~---~p~iaAv~ 305 (521)
+||+|+++..+ |..|.. -+.+++++
T Consensus 83 ~lD~D~~~~~~~l~~l~~~~~~~~v~~v~ 111 (235)
T cd06434 83 LLDSDTVWPPNALPEMLKPFEDPKVGGVG 111 (235)
T ss_pred EECCCceeChhHHHHHHHhccCCCEeEEc
Confidence 99999999887 555542 23455553
No 63
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=50.90 E-value=45 Score=33.81 Aligned_cols=88 Identities=20% Similarity=0.210 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhCCCCcEEEE-ECCCCCHHHHHHHHH----cCce-EEEEeeecCCcccccccchhhHHHHHHhccCCc
Q 043696 203 CGAIAAAQSIRMAGSTRDLVIL-VDETISDYHRGGLEA----AGWK-IHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDY 276 (521)
Q Consensus 203 ~gA~VL~~SLr~~ns~~dlvVL-vtd~Is~e~~~~Lk~----~g~~-v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eY 276 (521)
.-+..++.|+.+..+..++.|+ ++++-+.+..+.|++ .+.. .+.. +.. ...++ .+-.|=...+...-
T Consensus 17 ~~l~~~l~~l~~~~~~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~-----~~~-~~~f~-~a~arN~g~~~A~~ 89 (281)
T PF10111_consen 17 ERLRNCLESLSQFQSDPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRH-----EDN-GEPFS-RAKARNIGAKYARG 89 (281)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEc-----CCC-CCCcC-HHHHHHHHHHHcCC
Confidence 4555668888876666666554 444554443344443 3333 2111 100 00111 11122233344578
Q ss_pred ceEEEeecCeeccCC-chHhhc
Q 043696 277 DKIIFIDADLLILRN-IDFLFE 297 (521)
Q Consensus 277 DRVLYLDaD~LVl~n-LDeLF~ 297 (521)
|-|+++|+|+++-.+ +..+..
T Consensus 90 d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 90 DYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred CEEEEEcCCeeeCHHHHHHHHH
Confidence 999999999999765 444444
No 64
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=50.37 E-value=1.1e+02 Score=32.39 Aligned_cols=103 Identities=15% Similarity=0.054 Sum_probs=48.9
Q ss_pred CCCEEEEEEeecChhhHHHHHHHHHHHHHhC-C-CCcEEEEECCCCCHHHHHHHHHcCc------eEEEEeeecCCcccc
Q 043696 186 ARREAYATILHSAHVYVCGAIAAAQSIRMAG-S-TRDLVILVDETISDYHRGGLEAAGW------KIHTIQRIRNPKAER 257 (521)
Q Consensus 186 ~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~n-s-~~dlvVLvtd~Is~e~~~~Lk~~g~------~v~~V~~I~~p~~~~ 257 (521)
.++...+....+.+ ....-++.||.... + .+. +|+++|+-++.+.+.+++... +++.+..-..|..
T Consensus 39 ~p~VSVIIpa~Ne~---~~L~~~L~sL~~q~yp~~~e-IIVVDd~StD~T~~i~~~~~~~~~~~~~i~vi~~~~~~~g-- 112 (384)
T TIGR03469 39 WPAVVAVVPARNEA---DVIGECVTSLLEQDYPGKLH-VILVDDHSTDGTADIARAAARAYGRGDRLTVVSGQPLPPG-- 112 (384)
T ss_pred CCCEEEEEecCCcH---hHHHHHHHHHHhCCCCCceE-EEEEeCCCCCcHHHHHHHHHHhcCCCCcEEEecCCCCCCC--
Confidence 34455554444333 44556777887542 3 223 345666666666666655421 2222221011111
Q ss_pred cccchhhHHHHHHhcc-----CCcceEEEeecCeeccCC-chHhh
Q 043696 258 DAYNEWNYSKFRLWQL-----TDYDKIIFIDADLLILRN-IDFLF 296 (521)
Q Consensus 258 ~~~~~~ty~KL~lw~L-----~eYDRVLYLDaD~LVl~n-LDeLF 296 (521)
.....+.--...+. .+.|-|+++|+|+++-.+ +..+.
T Consensus 113 --~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv 155 (384)
T TIGR03469 113 --WSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLV 155 (384)
T ss_pred --CcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHH
Confidence 11111111111122 238999999999998554 34443
No 65
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=49.93 E-value=57 Score=29.52 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=41.4
Q ss_pred HHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHcCc----eEEEEeeecCCcccccccchhhHHHHHHhccCCcceE
Q 043696 205 AIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAAGW----KIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKI 279 (521)
Q Consensus 205 A~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~g~----~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRV 279 (521)
..-++.||.+. .....++ +++++-++...+.+++... +++.+. ..+.. + .....+=...+....+-|
T Consensus 12 l~~~l~sl~~q~~~~~eii-vvdd~s~d~t~~~~~~~~~~~~~~~~~~~--~~~~~----~-~~~~~~n~g~~~a~g~~i 83 (182)
T cd06420 12 LELVLKSVLNQSILPFEVI-IADDGSTEETKELIEEFKSQFPIPIKHVW--QEDEG----F-RKAKIRNKAIAAAKGDYL 83 (182)
T ss_pred HHHHHHHHHhccCCCCEEE-EEeCCCchhHHHHHHHHHhhcCCceEEEE--cCCcc----h-hHHHHHHHHHHHhcCCEE
Confidence 44566777654 3444444 4555556555566655422 232221 11110 0 011122234455678999
Q ss_pred EEeecCeeccCC
Q 043696 280 IFIDADLLILRN 291 (521)
Q Consensus 280 LYLDaD~LVl~n 291 (521)
++||+|.++..+
T Consensus 84 ~~lD~D~~~~~~ 95 (182)
T cd06420 84 IFIDGDCIPHPD 95 (182)
T ss_pred EEEcCCcccCHH
Confidence 999999998655
No 66
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=48.31 E-value=1.3e+02 Score=27.64 Aligned_cols=23 Identities=13% Similarity=0.153 Sum_probs=17.3
Q ss_pred HHhccCCcceEEEeecCeeccCC
Q 043696 269 RLWQLTDYDKIIFIDADLLILRN 291 (521)
Q Consensus 269 ~lw~L~eYDRVLYLDaD~LVl~n 291 (521)
..++....|-|+++|+|.++-.+
T Consensus 77 ~g~~~a~~d~i~~ld~D~~~~~~ 99 (202)
T cd04184 77 SALELATGEFVALLDHDDELAPH 99 (202)
T ss_pred HHHHhhcCCEEEEECCCCcCChH
Confidence 33444567999999999988654
No 67
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=46.92 E-value=41 Score=35.82 Aligned_cols=63 Identities=25% Similarity=0.386 Sum_probs=41.4
Q ss_pred CccEEEEecccCCCCCccch--------------hhHHHHHHHHHHhhhcCCCCccEEEEEeecccCC--cccccchhhh
Q 043696 79 RIDLVAVKLPCIKLGTWSRD--------------VARLHLQLEAARIASSSKGLHPVHVLLVTECFPI--PNLFTCKDIV 142 (521)
Q Consensus 79 ~~~~~~~~~~c~~~~~~~~~--------------~~rl~~~l~~a~~~~~~~~~~~~~~~~~~~c~p~--~~~f~c~~~~ 142 (521)
.+|-|.+-.||++.+.+.|| ..+||.+|..+-+..-..|+ +|+-|.|.-. -|=..+...+
T Consensus 229 ~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG----~LVYSTCS~~~eENE~vV~~~L 304 (355)
T COG0144 229 KFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGG----VLVYSTCSLTPEENEEVVERFL 304 (355)
T ss_pred cCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCC----EEEEEccCCchhcCHHHHHHHH
Confidence 69999999999886443222 56788888877766322333 7888989755 4545555555
Q ss_pred hcc
Q 043696 143 VRE 145 (521)
Q Consensus 143 ~~~ 145 (521)
++.
T Consensus 305 ~~~ 307 (355)
T COG0144 305 ERH 307 (355)
T ss_pred HhC
Confidence 443
No 68
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=46.35 E-value=72 Score=29.93 Aligned_cols=84 Identities=19% Similarity=0.150 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCCcE-EEEECCCCCHHHHHHHHHc---CceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEE
Q 043696 205 AIAAAQSIRMAGSTRDL-VILVDETISDYHRGGLEAA---GWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKII 280 (521)
Q Consensus 205 A~VL~~SLr~~ns~~dl-vVLvtd~Is~e~~~~Lk~~---g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVL 280 (521)
+..++.||.......++ +|+++++-++.+.+.++++ ...+..+. ..... .....+-...+....|-|+
T Consensus 12 l~~~l~sl~~q~~~~~~eiiiVDd~S~d~t~~~~~~~~~~~~~i~~~~---~~~n~-----G~~~a~n~g~~~a~gd~i~ 83 (224)
T cd06442 12 IPELIERLDAALKGIDYEIIVVDDNSPDGTAEIVRELAKEYPRVRLIV---RPGKR-----GLGSAYIEGFKAARGDVIV 83 (224)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEeCCCCCChHHHHHHHHHhCCceEEEe---cCCCC-----ChHHHHHHHHHHcCCCEEE
Confidence 45666777654322333 3455666556555555543 22222111 11100 0111222333334458899
Q ss_pred EeecCeeccCC-chHhh
Q 043696 281 FIDADLLILRN-IDFLF 296 (521)
Q Consensus 281 YLDaD~LVl~n-LDeLF 296 (521)
+||+|.++..+ +..+.
T Consensus 84 ~lD~D~~~~~~~l~~l~ 100 (224)
T cd06442 84 VMDADLSHPPEYIPELL 100 (224)
T ss_pred EEECCCCCCHHHHHHHH
Confidence 99999887543 33443
No 69
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=46.01 E-value=44 Score=35.36 Aligned_cols=21 Identities=14% Similarity=0.243 Sum_probs=17.1
Q ss_pred hccCCcceEEEeecCeeccCC
Q 043696 271 WQLTDYDKIIFIDADLLILRN 291 (521)
Q Consensus 271 w~L~eYDRVLYLDaD~LVl~n 291 (521)
.+...+|-|+++|+|+++-.+
T Consensus 122 ~~~a~ge~i~~~DaD~~~~p~ 142 (373)
T TIGR03472 122 LPHARHDILVIADSDISVGPD 142 (373)
T ss_pred HHhccCCEEEEECCCCCcChh
Confidence 344679999999999999655
No 70
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=45.36 E-value=1.4e+02 Score=28.16 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=22.8
Q ss_pred hHHHHHHhccCCcceEEEeecCeeccCC-chHh
Q 043696 264 NYSKFRLWQLTDYDKIIFIDADLLILRN-IDFL 295 (521)
Q Consensus 264 ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeL 295 (521)
.+.+-...+....|-|++||+|.++..+ +..+
T Consensus 73 ~~a~N~g~~~a~gd~i~~lD~D~~~~~~~l~~~ 105 (219)
T cd06913 73 GYAKNQAIAQSSGRYLCFLDSDDVMMPQRIRLQ 105 (219)
T ss_pred HHHHHHHHHhcCCCEEEEECCCccCChhHHHHH
Confidence 3455555666788999999999987654 4433
No 71
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=44.14 E-value=1e+02 Score=33.39 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=52.7
Q ss_pred CCEEEEEEeecChhhHHHHHHHHHHHHH-hCCCCcEEEEECCCCCHHHHHHHHHc---CceEEEEeeecCCcccccccch
Q 043696 187 RREAYATILHSAHVYVCGAIAAAQSIRM-AGSTRDLVILVDETISDYHRGGLEAA---GWKIHTIQRIRNPKAERDAYNE 262 (521)
Q Consensus 187 ~r~AyVTlLt~dd~Yl~gA~VL~~SLr~-~ns~~dlvVLvtd~Is~e~~~~Lk~~---g~~v~~V~~I~~p~~~~~~~~~ 262 (521)
++.+.+.-.++.+.. +.-++.|+.+ ..++++++| ++|+-++++.+.+++. ..++..+..-. ...+..
T Consensus 75 p~vsViIP~yNE~~~---i~~~l~sll~q~yp~~eIiv-VdDgs~D~t~~~~~~~~~~~~~v~vv~~~~-n~Gka~---- 145 (444)
T PRK14583 75 PLVSILVPCFNEGLN---ARETIHAALAQTYTNIEVIA-INDGSSDDTAQVLDALLAEDPRLRVIHLAH-NQGKAI---- 145 (444)
T ss_pred CcEEEEEEeCCCHHH---HHHHHHHHHcCCCCCeEEEE-EECCCCccHHHHHHHHHHhCCCEEEEEeCC-CCCHHH----
Confidence 445555555544433 3455667654 345556544 4555555555555443 22232222111 111101
Q ss_pred hhHHHHHHhccCCcceEEEeecCeeccCC-chHh----hcCCCeeeec
Q 043696 263 WNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFL----FEMPEITATG 305 (521)
Q Consensus 263 ~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeL----F~~p~iaAv~ 305 (521)
..=.......+|-|+.+|+|.++-.+ +..+ .+-+.++++.
T Consensus 146 ---AlN~gl~~a~~d~iv~lDAD~~~~~d~L~~lv~~~~~~~~~g~v~ 190 (444)
T PRK14583 146 ---ALRMGAAAARSEYLVCIDGDALLDKNAVPYLVAPLIANPRTGAVT 190 (444)
T ss_pred ---HHHHHHHhCCCCEEEEECCCCCcCHHHHHHHHHHHHhCCCeEEEE
Confidence 11111233578999999999998765 3333 2234566654
No 72
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=43.91 E-value=76 Score=28.71 Aligned_cols=88 Identities=16% Similarity=0.109 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHhCC---CCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEE
Q 043696 204 GAIAAAQSIRMAGS---TRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKII 280 (521)
Q Consensus 204 gA~VL~~SLr~~ns---~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVL 280 (521)
.+.-++.||.+... .+. +++++++-++...+.+++.+.+...+..+..+... + ....+-...+...-|-|+
T Consensus 11 ~l~~~l~sl~~~~~~~~~~e-iivvd~~s~d~~~~~~~~~~~~~~~~~~~~~~~n~-G----~~~a~n~g~~~a~gd~i~ 84 (185)
T cd04179 11 NIPELVERLLAVLEEGYDYE-IIVVDDGSTDGTAEIARELAARVPRVRVIRLSRNF-G----KGAAVRAGFKAARGDIVV 84 (185)
T ss_pred hHHHHHHHHHHHhccCCCEE-EEEEcCCCCCChHHHHHHHHHhCCCeEEEEccCCC-C----ccHHHHHHHHHhcCCEEE
Confidence 34566777776543 333 34555555566666666654333221222211110 0 111222333333348899
Q ss_pred EeecCeeccCC-chHhhc
Q 043696 281 FIDADLLILRN-IDFLFE 297 (521)
Q Consensus 281 YLDaD~LVl~n-LDeLF~ 297 (521)
+||+|..+..+ ++.|..
T Consensus 85 ~lD~D~~~~~~~l~~l~~ 102 (185)
T cd04179 85 TMDADLQHPPEDIPKLLE 102 (185)
T ss_pred EEeCCCCCCHHHHHHHHH
Confidence 99999988665 566655
No 73
>PRK10073 putative glycosyl transferase; Provisional
Probab=42.94 E-value=98 Score=32.30 Aligned_cols=96 Identities=13% Similarity=0.077 Sum_probs=49.7
Q ss_pred CEEEEEEeecChhhHHHHHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHcC---ceEEEEeeecCCcccccccchh
Q 043696 188 REAYATILHSAHVYVCGAIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAAG---WKIHTIQRIRNPKAERDAYNEW 263 (521)
Q Consensus 188 r~AyVTlLt~dd~Yl~gA~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~g---~~v~~V~~I~~p~~~~~~~~~~ 263 (521)
....+.-.+....|+.. ++.||... .++.. +|+++|+-++.+.+.+++.. ..+..+ ..+... .
T Consensus 7 ~vSVIIP~yN~~~~L~~---~l~Sl~~Qt~~~~E-IIiVdDgStD~t~~i~~~~~~~~~~i~vi---~~~n~G------~ 73 (328)
T PRK10073 7 KLSIIIPLYNAGKDFRA---FMESLIAQTWTALE-IIIVNDGSTDNSVEIAKHYAENYPHVRLL---HQANAG------V 73 (328)
T ss_pred eEEEEEeccCCHHHHHH---HHHHHHhCCCCCeE-EEEEeCCCCccHHHHHHHHHhhCCCEEEE---ECCCCC------h
Confidence 34444444544556544 45777653 33333 34566666666666666542 223222 222111 1
Q ss_pred hHHHHHHhccCCcceEEEeecCeeccCC-chHhh
Q 043696 264 NYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLF 296 (521)
Q Consensus 264 ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeLF 296 (521)
...+=...+...-+-|++||+|-.+..+ +..+.
T Consensus 74 ~~arN~gl~~a~g~yi~flD~DD~~~p~~l~~l~ 107 (328)
T PRK10073 74 SVARNTGLAVATGKYVAFPDADDVVYPTMYETLM 107 (328)
T ss_pred HHHHHHHHHhCCCCEEEEECCCCccChhHHHHHH
Confidence 1223233344566889999999998765 33443
No 74
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=41.31 E-value=1.4e+02 Score=28.36 Aligned_cols=17 Identities=35% Similarity=0.436 Sum_probs=14.1
Q ss_pred CcceEEEeecCeeccCC
Q 043696 275 DYDKIIFIDADLLILRN 291 (521)
Q Consensus 275 eYDRVLYLDaD~LVl~n 291 (521)
.+|-|++||+|.++-.+
T Consensus 84 ~~d~i~~lD~D~~~~~~ 100 (236)
T cd06435 84 DAEIIAVIDADYQVEPD 100 (236)
T ss_pred CCCEEEEEcCCCCcCHH
Confidence 48999999999987554
No 75
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=41.23 E-value=1e+02 Score=33.53 Aligned_cols=94 Identities=11% Similarity=-0.003 Sum_probs=47.5
Q ss_pred CCEEEEEEeecChhhHHHHHHHHHHHHHhC-CCCcE-EEEECCCCCHHHHHHHHH---cCceEEEEeeecCCcccccccc
Q 043696 187 RREAYATILHSAHVYVCGAIAAAQSIRMAG-STRDL-VILVDETISDYHRGGLEA---AGWKIHTIQRIRNPKAERDAYN 261 (521)
Q Consensus 187 ~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~n-s~~dl-vVLvtd~Is~e~~~~Lk~---~g~~v~~V~~I~~p~~~~~~~~ 261 (521)
++.+.+.-.+..+ ....-++.||.... +...+ +++++++-++++.+.+++ .+..+. +..+........
T Consensus 49 P~vsVIIP~yNe~---~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v~-v~~~~~~~Gka~--- 121 (439)
T TIGR03111 49 PDITIIIPVYNSE---DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGLS-LRYMNSDQGKAK--- 121 (439)
T ss_pred CCEEEEEEeCCCh---HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCeE-EEEeCCCCCHHH---
Confidence 3455555445443 33455667776543 43334 556777777777665543 222222 111211111111
Q ss_pred hhhHHHHHHhccCCcceEEEeecCeeccCC
Q 043696 262 EWNYSKFRLWQLTDYDKIIFIDADLLILRN 291 (521)
Q Consensus 262 ~~ty~KL~lw~L~eYDRVLYLDaD~LVl~n 291 (521)
..=...+....|-|+++|+|.++..+
T Consensus 122 ----AlN~gl~~s~g~~v~~~DaD~~~~~d 147 (439)
T TIGR03111 122 ----ALNAAIYNSIGKYIIHIDSDGKLHKD 147 (439)
T ss_pred ----HHHHHHHHccCCEEEEECCCCCcChH
Confidence 11112233446679999999999654
No 76
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=40.32 E-value=45 Score=34.35 Aligned_cols=128 Identities=12% Similarity=0.137 Sum_probs=73.0
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHH------HHHHHHHcCceEEEEeeecCCccccc
Q 043696 185 RARREAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDY------HRGGLEAAGWKIHTIQRIRNPKAERD 258 (521)
Q Consensus 185 ~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e------~~~~Lk~~g~~v~~V~~I~~p~~~~~ 258 (521)
..++..|+--..+.++-=.-+..++.|++++++++++++|-.+++.+- ..+++.. +
T Consensus 43 ~~~k~IW~~W~QG~e~aP~~Vk~ci~s~~k~~~~~~Vi~lt~~Ni~~Yv~~P~~i~~k~~~------------------g 104 (276)
T PF05704_consen 43 TNEKIIWVCWWQGEENAPEIVKKCINSWRKNAPDYEVILLTEDNIKDYVDIPDFILEKYEK------------------G 104 (276)
T ss_pred CCCCcEEEEECCCccccCHHHHHHHHHHHHHCCCCeEEEEChHHHHHHcCCchhHHHHHHc------------------C
Confidence 355568888776544432335789999999999999998754433221 1111110 1
Q ss_pred ccc---hhhHHHHHHhccCCcceEEEeecCeeccCCchHhhc-CCCeeee-cC-C-----CCCccceEEEEecCHHHHHH
Q 043696 259 AYN---EWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFE-MPEITAT-GN-N-----ATLFNSGVMVVEPSNCTFQL 327 (521)
Q Consensus 259 ~~~---~~ty~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF~-~p~iaAv-~d-~-----~~yFNSGVMVInPs~~~f~~ 327 (521)
..+ ..-+.|+.+-. .|. =+||||++++.++|++++. .+.++-. .+ . .....+++|.-.+....++.
T Consensus 105 ~i~~a~~SDilR~~LL~--~yG-GvWiDatv~~t~~l~~~~~~~~ff~~~~~~~~~~~~~~~~w~~~fi~a~~~n~~~~~ 181 (276)
T PF05704_consen 105 KISPAHFSDILRLALLY--KYG-GVWIDATVYLTKPLDDEIFDSDFFSFSRPDKDYNPISISSWTNFFIAAKKGNPFIKF 181 (276)
T ss_pred CCchhHHHHHHHHHHHH--HcC-cEEeCCceEECCchhHHHhcCCeeEEeccCcCcccchHHHhHhhheeECCCCHHHHH
Confidence 111 12345555432 222 3799999999999998754 3332221 11 1 12234556777777766666
Q ss_pred HHHHHh
Q 043696 328 LMDHIY 333 (521)
Q Consensus 328 L~e~l~ 333 (521)
+.+.+.
T Consensus 182 ~~~~~~ 187 (276)
T PF05704_consen 182 WRDLLL 187 (276)
T ss_pred HHHHHH
Confidence 665553
No 77
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=39.01 E-value=2.2e+02 Score=28.63 Aligned_cols=39 Identities=26% Similarity=0.385 Sum_probs=27.0
Q ss_pred CCcceEEEeecCeeccCC-chHhh----cCCCeeeecCCCCCcc
Q 043696 274 TDYDKIIFIDADLLILRN-IDFLF----EMPEITATGNNATLFN 312 (521)
Q Consensus 274 ~eYDRVLYLDaD~LVl~n-LDeLF----~~p~iaAv~d~~~yFN 312 (521)
..||-|+.+|||+++..+ |..+. .-|.++++.-+..++|
T Consensus 94 ~~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq~~~~~~n 137 (254)
T cd04191 94 SRYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQTAPKLIG 137 (254)
T ss_pred CCCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEeCCceeEC
Confidence 578999999999999877 44443 2456777754334444
No 78
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=38.67 E-value=1.6e+02 Score=26.70 Aligned_cols=24 Identities=29% Similarity=0.284 Sum_probs=17.2
Q ss_pred CCcceEEEeecCeeccCC-chHhhc
Q 043696 274 TDYDKIIFIDADLLILRN-IDFLFE 297 (521)
Q Consensus 274 ~eYDRVLYLDaD~LVl~n-LDeLF~ 297 (521)
...|-|+++|+|...-.+ ++.+.+
T Consensus 79 a~~d~i~~~D~D~~~~~~~l~~l~~ 103 (181)
T cd04187 79 ARGDAVITMDADLQDPPELIPEMLA 103 (181)
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHH
Confidence 345889999999997544 555554
No 79
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=37.27 E-value=1.7e+02 Score=30.43 Aligned_cols=77 Identities=25% Similarity=0.255 Sum_probs=40.7
Q ss_pred HHHHHHHHHhCC-C-CcEEEEECCCCCHHHHHHHHHcCceEEEEe-eec-CCcccccccchhhHHHHHHhccCCcceEEE
Q 043696 206 IAAAQSIRMAGS-T-RDLVILVDETISDYHRGGLEAAGWKIHTIQ-RIR-NPKAERDAYNEWNYSKFRLWQLTDYDKIIF 281 (521)
Q Consensus 206 ~VL~~SLr~~ns-~-~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~-~I~-~p~~~~~~~~~~ty~KL~lw~L~eYDRVLY 281 (521)
.-++.||..... . ..-+|+++++-++.+.+.+++.+.+++... .+. .+.. . . .....-........|-|++
T Consensus 47 ~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~~~~v~~~~~~~~~~~~n-~---G-kg~A~~~g~~~a~gd~vv~ 121 (306)
T PRK13915 47 GKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAAGARVVSREEILPELPPR-P---G-KGEALWRSLAATTGDIVVF 121 (306)
T ss_pred HHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHhcchhhcchhhhhccccC-C---C-HHHHHHHHHHhcCCCEEEE
Confidence 345566665321 1 123455777777777888888876654321 111 0110 0 0 0001111233456899999
Q ss_pred eecCee
Q 043696 282 IDADLL 287 (521)
Q Consensus 282 LDaD~L 287 (521)
+|+|..
T Consensus 122 lDaD~~ 127 (306)
T PRK13915 122 VDADLI 127 (306)
T ss_pred EeCccc
Confidence 999997
No 80
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=37.10 E-value=2.9e+02 Score=28.75 Aligned_cols=91 Identities=21% Similarity=0.141 Sum_probs=43.9
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHH-HhCCCCcEEEEECCCCCHHHHHHHHHc----CceEEEEeeecCCcccccccchh
Q 043696 189 EAYATILHSAHVYVCGAIAAAQSIR-MAGSTRDLVILVDETISDYHRGGLEAA----GWKIHTIQRIRNPKAERDAYNEW 263 (521)
Q Consensus 189 ~AyVTlLt~dd~Yl~gA~VL~~SLr-~~ns~~dlvVLvtd~Is~e~~~~Lk~~----g~~v~~V~~I~~p~~~~~~~~~~ 263 (521)
...|.-.+..+..+...+-.+.+.. +...++.+ |+++|+-++.+.+.+++. +.+++.+..-.+ ..+
T Consensus 8 vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EI-IvVDDgS~D~T~~il~~~~~~~~~~v~~i~~~~n--~G~------ 78 (325)
T PRK10714 8 VSVVIPVYNEQESLPELIRRTTAACESLGKEYEI-LLIDDGSSDNSAEMLVEAAQAPDSHIVAILLNRN--YGQ------ 78 (325)
T ss_pred EEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEE-EEEeCCCCCcHHHHHHHHHhhcCCcEEEEEeCCC--CCH------
Confidence 3334333444455554443333322 23334444 455666666666655543 444443321111 110
Q ss_pred hHHHHHHhccCCcceEEEeecCeec
Q 043696 264 NYSKFRLWQLTDYDKIIFIDADLLI 288 (521)
Q Consensus 264 ty~KL~lw~L~eYDRVLYLDaD~LV 288 (521)
.......++....|-|+++|+|...
T Consensus 79 ~~A~~~G~~~A~gd~vv~~DaD~q~ 103 (325)
T PRK10714 79 HSAIMAGFSHVTGDLIITLDADLQN 103 (325)
T ss_pred HHHHHHHHHhCCCCEEEEECCCCCC
Confidence 1122233344578999999999986
No 81
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=36.13 E-value=2.1e+02 Score=30.57 Aligned_cols=170 Identities=10% Similarity=0.131 Sum_probs=78.7
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHh-CCCCcEEE-EECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccch
Q 043696 185 RARREAYATILHSAHVYVCGAIAAAQSIRMA-GSTRDLVI-LVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYNE 262 (521)
Q Consensus 185 ~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~-ns~~dlvV-Lvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~~ 262 (521)
..-+.+.+.+.+ ..|+.-..-.+.|-.++ -.++++.. +.+|+.+.--.-.|. -+-++. |-.+ +.. ..+..
T Consensus 97 ~n~tIGL~vfA~--GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~vP~i~l~-~~r~~~-V~~v--~~~--~~Wqd 168 (337)
T PF03414_consen 97 QNITIGLTVFAT--GKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSKVPRIELG-PGRRLK-VFEV--QEE--KRWQD 168 (337)
T ss_dssp CT-EEEEEEEE---CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGGS-------TTEEEE-EEE---SGG--SSHHH
T ss_pred cCceEEEEEEec--ccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhhCCccccC-CCceeE-EEEe--ccc--CCCcc
Confidence 344555555544 37999888899998886 35555432 444432210000011 111111 1111 111 11122
Q ss_pred hhHHHHHHhc-------cCCcceEEEeecCeeccCCchH-hhcCCCeeee------------------------c-C-CC
Q 043696 263 WNYSKFRLWQ-------LTDYDKIIFIDADLLILRNIDF-LFEMPEITAT------------------------G-N-NA 308 (521)
Q Consensus 263 ~ty~KL~lw~-------L~eYDRVLYLDaD~LVl~nLDe-LF~~p~iaAv------------------------~-d-~~ 308 (521)
.+..|+.++. +.++|-+..+|+|+++.+.+.. .+. +.++.. + + ..
T Consensus 169 ~sm~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~Lg-~lva~LHp~~y~~~~~~FpYERrp~S~AyIp~~eGD 247 (337)
T PF03414_consen 169 ISMMRMEMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEILG-DLVATLHPWFYFKPRESFPYERRPKSQAYIPYGEGD 247 (337)
T ss_dssp HHHHHHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG-S-SEEEEESTTTTTSTGGGS--B-STTSTTB--TT--S
T ss_pred chhHHHHHHHHHHHHHHhhcCCEEEEEecceEEecccCHHHHH-HHHHHhCHHHHCCChhhCccccCccccccccCCCCC
Confidence 2445555443 2578999999999999987753 221 112211 0 1 23
Q ss_pred CCccceEEEEecCH------HHHHHHHHHHhh-cCCCCCCchhHHHHhcc---cceecCCcccccc
Q 043696 309 TLFNSGVMVVEPSN------CTFQLLMDHIYE-IESYNGGDQGYLNEIFT---WWHRIPKHMNFLK 364 (521)
Q Consensus 309 ~yFNSGVMVInPs~------~~f~~L~e~l~~-~~sy~~~DQdiLN~vF~---~w~~LP~~YN~l~ 364 (521)
-|+-+|+.-=.+.. .-.+.|++-..+ ..+ ...|..-||.+|- -.+.|+..|+...
T Consensus 248 fYY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~I~A-~WhDESHLNKYfl~~KPtKvLSPEY~Wd~ 312 (337)
T PF03414_consen 248 FYYHGAFFGGTVEEVLRLTEACHQGIMQDKANGIEA-LWHDESHLNKYFLYHKPTKVLSPEYCWDE 312 (337)
T ss_dssp --EECCEEEECHHHHHHHHHHHHHHHHHHHHTT----TTCHHHHHHHHHHHS--SEEE-GGGSBSH
T ss_pred eEEeceecCCcHHHHHHHHHHHHHHHHhhhhcCceE-eccchhhhHHHHhhCCCceecCHHHccCc
Confidence 45666665544322 112222222222 222 4789999999985 4678999888744
No 82
>PF01793 Glyco_transf_15: Glycolipid 2-alpha-mannosyltransferase; InterPro: IPR002685 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This entry represents a family of fungi mannosyl-transferases involved in N-linked and O-linked glycosylation of proteins. They belong to the glycosyltransferase family 15 (GT15 from CAZY). Some of the enzymes in this family have been shown to be involved in O- and N-linked glycan modifications in the Golgi [].; GO: 0000030 mannosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 1S4P_A 1S4O_A 1S4N_A.
Probab=34.69 E-value=1.1e+02 Score=32.49 Aligned_cols=108 Identities=19% Similarity=0.330 Sum_probs=52.6
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHh-CC--CCcEEEEECCCCCHHHHHHHHHc-CceEE--EEee--ecCCcc
Q 043696 184 ERARREAYATILHSAHVYVCGAIAAAQSIRMA-GS--TRDLVILVDETISDYHRGGLEAA-GWKIH--TIQR--IRNPKA 255 (521)
Q Consensus 184 ~~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~-ns--~~dlvVLvtd~Is~e~~~~Lk~~-g~~v~--~V~~--I~~p~~ 255 (521)
....+.|+|+++.. .=|.+++-+++||-.. |. +||.|+|.+..++++-++.++++ ..++. .|.. ...|..
T Consensus 52 ~~r~~Aafv~LvrN--~dL~~~l~SI~~lE~rFN~kf~YpwvFlnd~pFteeFk~~i~~~~~~~v~F~~Ip~e~W~~P~~ 129 (328)
T PF01793_consen 52 YPRENAAFVMLVRN--SDLEGLLSSIRSLEDRFNKKFNYPWVFLNDEPFTEEFKEAISNATSGKVEFGLIPKEHWSYPDW 129 (328)
T ss_dssp HS---EEEEEE--G--GGHHHHHHHHHHHHHHTTTTS---EEEEESS---HHHHHHHHHH-SS-EEEEE--GGGSS--TT
T ss_pred CCCCceEEEEEEEc--hhHHHHHHHHHHHHHHccCCCCCCEEEEeCCCCCHHHHHHHHHhhcCceEEEEeCHHHcCCCCc
Confidence 36778899997653 4599999999999763 44 78899999999999998888765 33332 2221 111211
Q ss_pred c---c------c------ccchh----hHHHH---HHhc---cCCcceEEEeecCeeccCCch
Q 043696 256 E---R------D------AYNEW----NYSKF---RLWQ---LTDYDKIIFIDADLLILRNID 293 (521)
Q Consensus 256 ~---~------~------~~~~~----ty~KL---~lw~---L~eYDRVLYLDaD~LVl~nLD 293 (521)
. + . .+... ...|+ +.|. |.+||=.-=+++|+-+..+|+
T Consensus 130 ID~~~a~~~~~~~~~~~v~yg~s~sYr~McRf~SG~F~~hp~l~~ydyyWRvEP~v~~~Cdi~ 192 (328)
T PF01793_consen 130 IDQEKAAESREKMAEEGVPYGDSESYRHMCRFYSGFFYRHPLLQDYDYYWRVEPDVKFYCDID 192 (328)
T ss_dssp S-HHHHHHHHHHHTT-TSTTTT-HHHHHHHHHHHHTGGGSGGGTT-SEEEE--TT-EE-S---
T ss_pred CCHHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHHhhhcChhhcCccEEEEeCCCceeecCCC
Confidence 0 0 0 01111 12222 2333 578999999999999998884
No 83
>PF02485 Branch: Core-2/I-Branching enzyme; InterPro: IPR003406 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase family 14 GT14 from CAZY, a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme (2.4.1.150 from EC) and core-2 branching enzyme (2.4.1.102 from EC). I-branching enzyme, an integral membrane protein, converts linear into branched poly-N-acetyllactosaminoglycans in the glycosylation pathway, and is responsible for the production of the blood group I-antigen during embryonic development []. Core-2 branching enzyme, also an integral membrane protein, forms crucial side-chain branches in O-glycans in the glycosylation pathway [].; GO: 0008375 acetylglucosaminyltransferase activity, 0016020 membrane; PDB: 3OTK_D 2GAM_A 2GAK_B.
Probab=34.40 E-value=1.9e+02 Score=28.30 Aligned_cols=102 Identities=15% Similarity=0.166 Sum_probs=51.4
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHc---CceEEEEe-eecCCcccccccchh-
Q 043696 189 EAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAA---GWKIHTIQ-RIRNPKAERDAYNEW- 263 (521)
Q Consensus 189 ~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~---g~~v~~V~-~I~~p~~~~~~~~~~- 263 (521)
.||+.+.+.+ -...+..+++.|. .++..++|-++..-+....+.+++. ...++.++ ++. ..-+.++..
T Consensus 1 iAylil~h~~--~~~~~~~l~~~l~--~~~~~f~iHiD~k~~~~~~~~~~~~~~~~~nv~~v~~r~~---v~WG~~S~v~ 73 (244)
T PF02485_consen 1 IAYLILAHKN--DPEQLERLLRLLY--HPDNDFYIHIDKKSPDYFYEEIKKLISCFPNVHFVPKRVD---VRWGGFSLVE 73 (244)
T ss_dssp EEEEEEESS----HHHHHHHHHHH----TTSEEEEEE-TTS-HHHHHHHHHHHCT-TTEEE-SS--------TTSHHHHH
T ss_pred CEEEEEecCC--CHHHHHHHHHHhc--CCCCEEEEEEcCCCChHHHHHHHHhcccCCceeecccccc---cccCCccHHH
Confidence 4888877652 4666777777766 5666777777766676666666652 33343333 111 000111110
Q ss_pred hHHHHHH--hcc-CCcceEEEeecCeeccCCchHhhc
Q 043696 264 NYSKFRL--WQL-TDYDKIIFIDADLLILRNIDFLFE 297 (521)
Q Consensus 264 ty~KL~l--w~L-~eYDRVLYLDaD~LVl~nLDeLF~ 297 (521)
+-.++.- .+. .+++.++.|..+.+.+.+.+++.+
T Consensus 74 A~l~ll~~al~~~~~~~y~~llSg~D~Pl~s~~~i~~ 110 (244)
T PF02485_consen 74 ATLNLLREALKRDGDWDYFILLSGQDYPLKSNEEIHE 110 (244)
T ss_dssp HHHHHHHHHHHH-S---EEEEEETTEEESS-HHHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEEcccccccccchHHHHH
Confidence 1111111 121 489999999999999999888864
No 84
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=34.23 E-value=68 Score=35.70 Aligned_cols=62 Identities=21% Similarity=0.273 Sum_probs=39.0
Q ss_pred CccEEEEecccCCCCCccch--------------hhHHHHHHHHHHhh-hcCCCCccEEEEEeecccCC--cccccchhh
Q 043696 79 RIDLVAVKLPCIKLGTWSRD--------------VARLHLQLEAARIA-SSSKGLHPVHVLLVTECFPI--PNLFTCKDI 141 (521)
Q Consensus 79 ~~~~~~~~~~c~~~~~~~~~--------------~~rl~~~l~~a~~~-~~~~~~~~~~~~~~~~c~p~--~~~f~c~~~ 141 (521)
.+|.|++-.||++.+-+.|| ..+||.+|..+-.. .+ .|+ +|+-|.|--. .|=-.+..+
T Consensus 183 ~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~Lk-pGG----~LVYSTCT~~~eENE~vV~~~ 257 (470)
T PRK11933 183 TFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALK-PGG----TLVYSTCTLNREENQAVCLWL 257 (470)
T ss_pred hcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcC-CCc----EEEEECCCCCHHHHHHHHHHH
Confidence 58999999999987666555 45677777654443 22 122 5677888643 444445555
Q ss_pred hhcc
Q 043696 142 VVRE 145 (521)
Q Consensus 142 ~~~~ 145 (521)
+++.
T Consensus 258 L~~~ 261 (470)
T PRK11933 258 KETY 261 (470)
T ss_pred HHHC
Confidence 5543
No 85
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=33.85 E-value=85 Score=31.72 Aligned_cols=19 Identities=21% Similarity=0.543 Sum_probs=15.0
Q ss_pred CccEEEEecccCCCCCccc
Q 043696 79 RIDLVAVKLPCIKLGTWSR 97 (521)
Q Consensus 79 ~~~~~~~~~~c~~~~~~~~ 97 (521)
.+|+|++-.||.+.+-+.|
T Consensus 140 ~fD~Vl~D~Pcsg~G~~~~ 158 (264)
T TIGR00446 140 KFDAILLDAPCSGEGVIRK 158 (264)
T ss_pred CCCEEEEcCCCCCCccccc
Confidence 4899999999987654443
No 86
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=33.46 E-value=3.5e+02 Score=31.70 Aligned_cols=114 Identities=22% Similarity=0.268 Sum_probs=56.9
Q ss_pred CCCEEEEEEeecCh-hhH-HHHHHHHHHHHHhCC--CCcEEEEECCCCCHHHH-------HHHHH-c--CceEEEEeeec
Q 043696 186 ARREAYATILHSAH-VYV-CGAIAAAQSIRMAGS--TRDLVILVDETISDYHR-------GGLEA-A--GWKIHTIQRIR 251 (521)
Q Consensus 186 ~~r~AyVTlLt~dd-~Yl-~gA~VL~~SLr~~ns--~~dlvVLvtd~Is~e~~-------~~Lk~-~--g~~v~~V~~I~ 251 (521)
..+.+.+.=+++.+ ..+ ..+.++..||...+. +++++ +++|+-+++.. ..|.+ + +.++....+..
T Consensus 123 ~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~-vLdD~~d~~~~~~e~~~~~~L~~~~~~~~~i~yr~R~~ 201 (691)
T PRK05454 123 EARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFF-ILSDTRDPDIAAAEEAAWLELRAELGGEGRIFYRRRRR 201 (691)
T ss_pred CCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEE-EEECCCChhHHHHHHHHHHHHHHhcCCCCcEEEEECCc
Confidence 44555554444322 222 456777889987654 45554 45555444321 23332 2 23444333333
Q ss_pred CCcccccccchhhHHHHHHhccCCcceEEEeecCeeccCC-chHhh---c-CCCeeeec
Q 043696 252 NPKAERDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLF---E-MPEITATG 305 (521)
Q Consensus 252 ~p~~~~~~~~~~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeLF---~-~p~iaAv~ 305 (521)
+...+..+.+ .+.+ .+. ..||-|+.||||+++-++ +..+. + -|.++++.
T Consensus 202 n~~~KaGNl~--~~~~--~~~-~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 202 NVGRKAGNIA--DFCR--RWG-GAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred CCCccHHHHH--HHHH--hcC-CCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 3322211111 1111 111 579999999999999886 44443 2 23566654
No 87
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=33.01 E-value=3.6e+02 Score=27.94 Aligned_cols=44 Identities=16% Similarity=0.061 Sum_probs=31.1
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcE--EEEECCCCC
Q 043696 184 ERARREAYATILHSAHVYVCGAIAAAQSIRMAGSTRDL--VILVDETIS 230 (521)
Q Consensus 184 ~~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dl--vVLvtd~Is 230 (521)
....+..++|-|-....|++.-.-++.|| +.|+..| -+|++ +.+
T Consensus 22 ~~~e~VLILtplrna~~~l~~y~~~L~~L--~YP~~lIsLgfLv~-d~~ 67 (269)
T PF03452_consen 22 RNKESVLILTPLRNAASFLPDYFDNLLSL--TYPHELISLGFLVS-DSS 67 (269)
T ss_pred ccCCeEEEEEecCCchHHHHHHHHHHHhC--CCCchheEEEEEcC-CCc
Confidence 46778889999977788988888888887 4554444 44554 444
No 88
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=32.57 E-value=2.9e+02 Score=26.84 Aligned_cols=25 Identities=20% Similarity=0.263 Sum_probs=17.2
Q ss_pred ccCCcceEEEeecCeeccCC-chHhh
Q 043696 272 QLTDYDKIIFIDADLLILRN-IDFLF 296 (521)
Q Consensus 272 ~L~eYDRVLYLDaD~LVl~n-LDeLF 296 (521)
.....|-|+++|+|..+-.+ |..|+
T Consensus 90 ~~a~g~~i~~lD~D~~~~~~~l~~l~ 115 (243)
T PLN02726 90 KHASGDFVVIMDADLSHHPKYLPSFI 115 (243)
T ss_pred HHcCCCEEEEEcCCCCCCHHHHHHHH
Confidence 34567899999999986432 44444
No 89
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=32.35 E-value=2.4e+02 Score=23.27 Aligned_cols=69 Identities=20% Similarity=0.218 Sum_probs=37.2
Q ss_pred CcEEEEECCCCCHHHHHHHHHcC-ceEEEEeeecCCcccccccchhhHHHHHHhccCCcceEEEeecCeeccCCc
Q 043696 219 RDLVILVDETISDYHRGGLEAAG-WKIHTIQRIRNPKAERDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNI 292 (521)
Q Consensus 219 ~dlvVLvtd~Is~e~~~~Lk~~g-~~v~~V~~I~~p~~~~~~~~~~ty~KL~lw~L~eYDRVLYLDaD~LVl~nL 292 (521)
.+-+++++++-++.+.+.|++.. ..++.. ..|.... .....+.+..+-...+++=|+++|+|=++.-+-
T Consensus 19 ~d~i~i~d~~s~D~t~~~l~~~~~v~i~~~---~~~~~~~--~~~~~~~~~~~~~~~~~dWvl~~D~DEfl~~~~ 88 (97)
T PF13704_consen 19 VDHIYIYDDGSTDGTREILRALPGVGIIRW---VDPYRDE--RRQRAWRNALIERAFDADWVLFLDADEFLVPPP 88 (97)
T ss_pred CCEEEEEECCCCccHHHHHHhCCCcEEEEe---CCCccch--HHHHHHHHHHHHhCCCCCEEEEEeeeEEEecCC
Confidence 45555667777777788888762 222221 1122110 011122333332345789999999998776443
No 90
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=28.86 E-value=21 Score=38.07 Aligned_cols=37 Identities=27% Similarity=0.574 Sum_probs=34.2
Q ss_pred hHHHHHHhccCCcceEEEeecCeeccCCchHhhcCCC
Q 043696 264 NYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPE 300 (521)
Q Consensus 264 ty~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF~~p~ 300 (521)
.+.++.+|.+.++.+.+|++.|+.+..+++++|+.+.
T Consensus 113 ~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~~ 149 (369)
T KOG1950|consen 113 RDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVPN 149 (369)
T ss_pred cccceeecceeccCceEEEecchhhccCccccccccc
Confidence 3788999999999999999999999999999999874
No 91
>PLN00054 photosystem I reaction center subunit N; Provisional
Probab=27.84 E-value=36 Score=31.32 Aligned_cols=30 Identities=13% Similarity=0.236 Sum_probs=25.2
Q ss_pred CCCccEEEEEeecccCCcccccchhhhhcc
Q 043696 116 KGLHPVHVLLVTECFPIPNLFTCKDIVVRE 145 (521)
Q Consensus 116 ~~~~~~~~~~~~~c~p~~~~f~c~~~~~~~ 145 (521)
-.....|-|-.|.|.=..|+|-|.+|.++.
T Consensus 80 ANfaRa~TV~~G~C~FP~Nf~GCqdlA~~k 109 (139)
T PLN00054 80 ANFARSRTVQDGTCKFPENFTGCEDLAKQK 109 (139)
T ss_pred hhhhhheeeecccccCCcccccHHHHHhcC
Confidence 334578899999999999999999998763
No 92
>PRK10018 putative glycosyl transferase; Provisional
Probab=25.11 E-value=7e+02 Score=25.46 Aligned_cols=28 Identities=21% Similarity=0.119 Sum_probs=20.5
Q ss_pred HhccCCcceEEEeecCeeccCC-chHhhc
Q 043696 270 LWQLTDYDKIIFIDADLLILRN-IDFLFE 297 (521)
Q Consensus 270 lw~L~eYDRVLYLDaD~LVl~n-LDeLF~ 297 (521)
..+....+-|++||+|.++..+ |..+..
T Consensus 80 gi~~a~g~~I~~lDaDD~~~p~~l~~~~~ 108 (279)
T PRK10018 80 AIMLAQGEYITGIDDDDEWTPNRLSVFLA 108 (279)
T ss_pred HHHHcCCCEEEEECCCCCCCccHHHHHHH
Confidence 3445678899999999999876 554443
No 93
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=24.61 E-value=2.5e+02 Score=26.50 Aligned_cols=21 Identities=19% Similarity=0.338 Sum_probs=17.6
Q ss_pred CcceEEEeecCeeccCC-chHh
Q 043696 275 DYDKIIFIDADLLILRN-IDFL 295 (521)
Q Consensus 275 eYDRVLYLDaD~LVl~n-LDeL 295 (521)
++|-|++||+|+++-.+ |+.|
T Consensus 75 ~~d~v~~lD~D~~~~~~~l~~l 96 (237)
T cd02526 75 GADYVLLFDQDSVPPPDMVEKL 96 (237)
T ss_pred CCCEEEEECCCCCcCHhHHHHH
Confidence 68999999999999765 5566
No 94
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=23.70 E-value=1.5e+02 Score=32.44 Aligned_cols=51 Identities=25% Similarity=0.430 Sum_probs=29.8
Q ss_pred CccEEEEecccCCCCCccch-----------h---hHHHHHHHHHHhhhcCCCCccEEEEEeecccCCc
Q 043696 79 RIDLVAVKLPCIKLGTWSRD-----------V---ARLHLQLEAARIASSSKGLHPVHVLLVTECFPIP 133 (521)
Q Consensus 79 ~~~~~~~~~~c~~~~~~~~~-----------~---~rl~~~l~~a~~~~~~~~~~~~~~~~~~~c~p~~ 133 (521)
.+|.|++-.||.+.+.+.|+ + ..+|.++..+-...-..|+ +|+.|.|...+
T Consensus 307 ~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG----~LvYsTCs~~~ 371 (431)
T PRK14903 307 TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGG----ILLYSTCTVTK 371 (431)
T ss_pred cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCC----EEEEEECCCCh
Confidence 68999999999876555432 2 2355555432222111222 57788887553
No 95
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=23.23 E-value=1.5e+02 Score=32.14 Aligned_cols=62 Identities=21% Similarity=0.348 Sum_probs=35.1
Q ss_pred CCCccEEEEecccCCCCCccc-----------hh---hHHHHHHH--HHHhhhcCCCCccEEEEEeecccCC--cccccc
Q 043696 77 KPRIDLVAVKLPCIKLGTWSR-----------DV---ARLHLQLE--AARIASSSKGLHPVHVLLVTECFPI--PNLFTC 138 (521)
Q Consensus 77 ~~~~~~~~~~~~c~~~~~~~~-----------~~---~rl~~~l~--~a~~~~~~~~~~~~~~~~~~~c~p~--~~~f~c 138 (521)
...+|+|++-.||.+.+.+.| |+ ..||..+. |+++... |+ .++.|.|.-. -|--..
T Consensus 307 ~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkp--gG----~lvystcs~~~~Ene~~v 380 (426)
T TIGR00563 307 NEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKT--GG----TLVYATCSVLPEENSEQI 380 (426)
T ss_pred ccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC--Cc----EEEEEeCCCChhhCHHHH
Confidence 357999999999988655432 33 34466664 3333332 22 5667777543 344444
Q ss_pred hhhhhc
Q 043696 139 KDIVVR 144 (521)
Q Consensus 139 ~~~~~~ 144 (521)
..++++
T Consensus 381 ~~~l~~ 386 (426)
T TIGR00563 381 KAFLQE 386 (426)
T ss_pred HHHHHh
Confidence 444443
No 96
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=22.85 E-value=1.6e+02 Score=32.14 Aligned_cols=65 Identities=22% Similarity=0.314 Sum_probs=35.5
Q ss_pred CCccEEEEecccCCCCCccc-----------hhhH---HHHHHHHHHhhhcCCCCccEEEEEee-cccCCcccccchhhh
Q 043696 78 PRIDLVAVKLPCIKLGTWSR-----------DVAR---LHLQLEAARIASSSKGLHPVHVLLVT-ECFPIPNLFTCKDIV 142 (521)
Q Consensus 78 ~~~~~~~~~~~c~~~~~~~~-----------~~~r---l~~~l~~a~~~~~~~~~~~~~~~~~~-~c~p~~~~f~c~~~~ 142 (521)
..+|.|++-.||.+.+.+.| |+.+ ||..+..+-...-..|+ ++|+.+ +..|-.|.-.+...+
T Consensus 324 ~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG---~lvystcsi~~~Ene~~v~~~l 400 (434)
T PRK14901 324 GYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGG---TLVYATCTLHPAENEAQIEQFL 400 (434)
T ss_pred ccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCC---EEEEEeCCCChhhHHHHHHHHH
Confidence 36899999999987554432 3333 34444433222111222 244332 455666776677666
Q ss_pred hcc
Q 043696 143 VRE 145 (521)
Q Consensus 143 ~~~ 145 (521)
++.
T Consensus 401 ~~~ 403 (434)
T PRK14901 401 ARH 403 (434)
T ss_pred HhC
Confidence 654
No 97
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=22.21 E-value=1.9e+02 Score=30.47 Aligned_cols=69 Identities=20% Similarity=0.188 Sum_probs=36.3
Q ss_pred CCCcEEEEECCCCCHHHHHHHHHcCceEE-EEeeecCC-cccccccchhhHHHHHHhccCCcceEEEeecCeeccCC
Q 043696 217 STRDLVILVDETISDYHRGGLEAAGWKIH-TIQRIRNP-KAERDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRN 291 (521)
Q Consensus 217 s~~dlvVLvtd~Is~e~~~~Lk~~g~~v~-~V~~I~~p-~~~~~~~~~~ty~KL~lw~L~eYDRVLYLDaD~LVl~n 291 (521)
+.+++ ++++|+-+++..+.+++.+.+.. .+..+ .+ ...... ..... .......+|=|+.+|||+++-.|
T Consensus 83 p~~ev-ivv~d~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~gK-~~al~---~~l~~~~~d~V~~~DaD~~~~~d 153 (439)
T COG1215 83 PRYEV-IVVDDGSTDETYEILEELGAEYGPNFRVI-YPEKKNGGK-AGALN---NGLKRAKGDVVVILDADTVPEPD 153 (439)
T ss_pred CCceE-EEECCCCChhHHHHHHHHHhhcCcceEEE-eccccCccc-hHHHH---HHHhhcCCCEEEEEcCCCCCChh
Confidence 33344 45566778888888887765431 11111 11 110000 00001 11222449999999999999765
No 98
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=20.24 E-value=2.1e+02 Score=31.26 Aligned_cols=18 Identities=22% Similarity=0.499 Sum_probs=14.6
Q ss_pred CCccEEEEecccCCCCCc
Q 043696 78 PRIDLVAVKLPCIKLGTW 95 (521)
Q Consensus 78 ~~~~~~~~~~~c~~~~~~ 95 (521)
..+|+|++-.||.+.+.+
T Consensus 317 ~~fD~Vl~D~Pcsg~g~~ 334 (445)
T PRK14904 317 EQPDAILLDAPCTGTGVL 334 (445)
T ss_pred CCCCEEEEcCCCCCcchh
Confidence 368999999999876544
Done!