Query 043696
Match_columns 521
No_of_seqs 267 out of 1408
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 12:40:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 3.6E-43 1.2E-47 352.0 20.2 238 186-433 2-256 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 2.9E-40 1E-44 340.8 21.6 246 187-442 2-265 (333)
3 3tzt_A Glycosyl transferase fa 100.0 7.3E-33 2.5E-37 278.3 15.1 225 195-436 10-273 (276)
4 1g9r_A Glycosyl transferase; a 100.0 5.2E-30 1.8E-34 260.8 17.2 207 195-404 5-256 (311)
5 1qg8_A Protein (spore coat pol 77.8 14 0.00047 34.2 10.4 100 189-295 3-109 (255)
6 3bcv_A Putative glycosyltransf 73.1 7.3 0.00025 35.7 7.0 97 187-296 5-106 (240)
7 3f1y_A Mannosyl-3-phosphoglyce 72.5 19 0.00067 37.0 10.7 96 186-287 93-191 (387)
8 2d7i_A Polypeptide N-acetylgal 72.1 7.3 0.00025 42.0 7.7 103 185-297 110-219 (570)
9 1xhb_A Polypeptide N-acetylgal 65.5 15 0.00053 37.9 8.3 104 184-297 26-137 (472)
10 1fo8_A Alpha-1,3-mannosyl-glyc 58.9 46 0.0016 33.9 10.2 100 194-296 8-120 (343)
11 2ffu_A Ppgalnact-2, polypeptid 49.8 1.3E+02 0.0043 31.3 12.1 104 184-297 63-169 (501)
12 3ckj_A Putative uncharacterize 48.5 53 0.0018 32.3 8.5 103 186-296 47-154 (329)
13 2z86_A Chondroitin synthase; G 46.2 71 0.0024 34.1 9.7 99 187-295 93-195 (625)
14 2p6w_A VP54, putative glycosyl 41.8 50 0.0017 31.4 6.5 58 266-323 63-132 (213)
15 1s4n_A Glycolipid 2-alpha-mann 31.4 1.4E+02 0.0049 30.5 8.5 112 184-297 24-168 (348)
16 2z86_A Chondroitin synthase; G 31.1 1.5E+02 0.0051 31.6 9.2 97 187-296 375-476 (625)
17 1o7q_A N-acetyllactosaminide a 26.9 64 0.0022 32.3 4.9 168 185-366 46-264 (289)
18 3lw5_N Photosystem I-N subunit 20.6 11 0.00036 30.6 -1.7 34 111-144 22-55 (85)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=3.6e-43 Score=351.97 Aligned_cols=238 Identities=29% Similarity=0.442 Sum_probs=188.9
Q ss_pred CCCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccc-----ccc
Q 043696 186 ARREAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAER-----DAY 260 (521)
Q Consensus 186 ~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~-----~~~ 260 (521)
..++||||+++ |++|++||+||++||+++|++++++||++++++++.++.|++.|.+++.|+.+..+.... ...
T Consensus 2 ~~~~AyvTl~t-d~~Yl~ga~vL~~SL~~~~s~~~lvvLvt~~vs~~~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~ 80 (263)
T 3u2u_A 2 MTDQAFVTLTT-NDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPE 80 (263)
T ss_dssp TTTEEEEEEES-SHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTT
T ss_pred CcceEEEEEEE-CHHHHHHHHHHHHHHHHhCCCCCEEEEecCCCCHHHHHHHHHcCCeEEEeeecCCcchhhhhhhcCcc
Confidence 45899999765 689999999999999999999999999999999999999999999999998876543211 111
Q ss_pred chhhHHHHHHhccCCcceEEEeecCeeccCCchHhhcCCCeeeecCC--CCCccceEEEEecCHHHHHHHHHHHhhcCCC
Q 043696 261 NEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEITATGNN--ATLFNSGVMVVEPSNCTFQLLMDHIYEIESY 338 (521)
Q Consensus 261 ~~~ty~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF~~p~iaAv~d~--~~yFNSGVMVInPs~~~f~~L~e~l~~~~sy 338 (521)
...+|+||++|++++||||||||+|++|++|||+||+++.++|++|. +.|||||||||+|+..+++++++.+.+.+++
T Consensus 81 ~~~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~~~aA~~d~~~~~~fNsGv~li~p~~~~~~~l~~~~~~~~~~ 160 (263)
T 3u2u_A 81 LGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHLASEQGSF 160 (263)
T ss_dssp GGGGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECTTSTTSEEEEEEEECCCHHHHHHHHHHHHHHCCT
T ss_pred hhHHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCCcceEeccCCCCccccCeEEEEcccHHHHHHHHHHHHhcCCC
Confidence 13589999999999999999999999999999999999999999874 5899999999999999999999999887789
Q ss_pred CCCchhHHHHhccc------ceecCCcccccccc-cCCChHHHHhhhhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCc
Q 043696 339 NGGDQGYLNEIFTW------WHRIPKHMNFLKHF-WEGDEEEKKHMKIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNW 410 (521)
Q Consensus 339 ~~~DQdiLN~vF~~------w~~LP~~YN~l~~~-~~~~~~~~~~~k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nw 410 (521)
.++|||+||.+|.. +++||.+||++... +... +.. +.+ .++++||||+| .|||+........-
T Consensus 161 ~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~----~~~--~~~---~~~~~IIHf~g~~KPW~~~~~~~~~~ 231 (263)
T 3u2u_A 161 DGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYL----PAF--KVF---GASAKVVHFLGRVKPWNYTYDPKTKS 231 (263)
T ss_dssp TSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSH----HHH--HHH---GGGCSEEECCSSSCGGGSEEETTTTE
T ss_pred CcccHHHHHHHhccccccCeeEeCCcccccccchhcccc----HHH--Hhh---cCCeEEEEECCCCcCCCCCCCCCCCc
Confidence 99999999999984 47999999998742 2211 111 111 24689999999 99998642211000
Q ss_pred ccccchhc--cchhHHhHHHHHHhh
Q 043696 411 NVDILQEF--ASDIAHKTWWKVHDA 433 (521)
Q Consensus 411 n~~~~~~~--~~d~~~~~WW~vyd~ 433 (521)
-....... ..+..-++||.+|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~ww~~~~~ 256 (263)
T 3u2u_A 232 VKSEAHDPNMTHPEFLILWWNIFTT 256 (263)
T ss_dssp EECCSSCGGGSSTHHHHHHHHHHHH
T ss_pred ccccCCCcchhHHHHHHHHHHHHHh
Confidence 00000000 125678999999986
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=2.9e-40 Score=340.81 Aligned_cols=246 Identities=30% Similarity=0.466 Sum_probs=190.3
Q ss_pred CCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcEEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccc-----cccc
Q 043696 187 RREAYATILHSAHVYVCGAIAAAQSIRMAGSTRDLVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAER-----DAYN 261 (521)
Q Consensus 187 ~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~-----~~~~ 261 (521)
+|.||||++ +|++|+++++|+++||++++++++++||++++++++.++.|++.+.+++.|+.+..+.... ....
T Consensus 2 s~~a~vt~~-~d~~Yl~~a~vl~~SL~~~~s~~~l~vlv~~~is~~~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~~ 80 (333)
T 1ll2_A 2 TDQAFVTLT-TNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKALEIVFDEVITVDILDSGDSAHLTLMKRPEL 80 (333)
T ss_dssp CSEEEEEEE-SSHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCHHHHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGG
T ss_pred CceEEEEEE-eCHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHHhCCEEEEEeecCCcchhhcccccccch
Confidence 689999975 5789999999999999999999999999999999999999999999998888765443211 1122
Q ss_pred hhhHHHHHHhccCCcceEEEeecCeeccCCchHhhcCCCeeeecC--CCCCccceEEEEecCHHHHHHHHHHHhhcCCCC
Q 043696 262 EWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFEMPEITATGN--NATLFNSGVMVVEPSNCTFQLLMDHIYEIESYN 339 (521)
Q Consensus 262 ~~ty~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF~~p~iaAv~d--~~~yFNSGVMVInPs~~~f~~L~e~l~~~~sy~ 339 (521)
..+|+||++|+|++||||||||+|+||++||++||+++.++|+++ .+.|||||||||+|+..+++++++.+.+.+.+.
T Consensus 81 ~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d~~~~~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~ 160 (333)
T 1ll2_A 81 GVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLLHVASEQGSFD 160 (333)
T ss_dssp HHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECSSSTTSEEEEEEEECCCHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEecCCCCcceeeeEEEEeCCHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999999999999999987 368999999999999999999999988777889
Q ss_pred CCchhHHHHhcccc------eecCCcccccccccCCChHHHHhhhhhcccCCCCCeEEEEecC-CCCCCCCCCCCCCccc
Q 043696 340 GGDQGYLNEIFTWW------HRIPKHMNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHYLG-NKPWLCFRDYDCNWNV 412 (521)
Q Consensus 340 ~~DQdiLN~vF~~w------~~LP~~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~G-~KPW~~~~~~d~nwn~ 412 (521)
++|||+||.+|..| ..||.+||++....... .+.. ..+ .++++||||+| .|||......... +.
T Consensus 161 ~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~---~p~~--~~~---~~~~~IiHf~g~~KPW~~~~~~~~~-~~ 231 (333)
T 1ll2_A 161 GGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSY---LPAF--KAF---GANAKVVHFLGQTKPWNYTYDTKTK-SV 231 (333)
T ss_dssp SSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHT---HHHH--HHH---GGGCSEEECCSSCCGGGSCEETTTT-EE
T ss_pred CCCHHHHHHHHHhhcccCccccCCcHHhcccccchhc---cHHH--Hhh---cCCCEEEEECCCCCCCCCCCCCCcc-cc
Confidence 99999999999866 79999999987531100 0111 111 24689999999 9999875321100 00
Q ss_pred ccchhc---cchhHHhHHHHHHhhhH-HHHHHHh
Q 043696 413 DILQEF---ASDIAHKTWWKVHDAMP-EHLQKFC 442 (521)
Q Consensus 413 ~~~~~~---~~d~~~~~WW~vyd~~p-~~l~~~c 442 (521)
...++. ..+..+++||++|++.- ..+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~WW~~~~~~~~~~~~~~~ 265 (333)
T 1ll2_A 232 RSEGHDPTMTHPQFLNVWWDIFTTSVVPLLQQFG 265 (333)
T ss_dssp C--------CCHHHHHHHHHHHHHTHHHHHTC--
T ss_pred ccccccccccHHHHHHHHHHHHHhhcccccchhh
Confidence 000000 03467899999998653 3334343
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=100.00 E-value=7.3e-33 Score=278.31 Aligned_cols=225 Identities=16% Similarity=0.220 Sum_probs=154.0
Q ss_pred eecChhhHHHHHHHHHHHHHhCCCCcEEE-EECCCCCHHHHHHHHHc----CceEEEEeeecCCcc---cccccchhhHH
Q 043696 195 LHSAHVYVCGAIAAAQSIRMAGSTRDLVI-LVDETISDYHRGGLEAA----GWKIHTIQRIRNPKA---ERDAYNEWNYS 266 (521)
Q Consensus 195 Lt~dd~Yl~gA~VL~~SLr~~ns~~dlvV-Lvtd~Is~e~~~~Lk~~----g~~v~~V~~I~~p~~---~~~~~~~~ty~ 266 (521)
+++|++|+.++.|+++||++++++.++.+ +++++++++.++.|++. +.++..+..-..... ...+++..+|+
T Consensus 10 ~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~ 89 (276)
T 3tzt_A 10 LTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFSYTLYPIRATDDLFSFAKVTDRYPKEMYY 89 (276)
T ss_dssp EECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTTCEEEEEECC-------------CHHHHH
T ss_pred EEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEEEeCHHHHhcCccccccCHHHHH
Confidence 56789999999999999999998766654 55678999998877764 666655542211111 11345567899
Q ss_pred HHHHhccC--CcceEEEeecCeeccCCchHhhcCC----CeeeecCC-----------------CCCccceEEEEecCHH
Q 043696 267 KFRLWQLT--DYDKIIFIDADLLILRNIDFLFEMP----EITATGNN-----------------ATLFNSGVMVVEPSNC 323 (521)
Q Consensus 267 KL~lw~L~--eYDRVLYLDaD~LVl~nLDeLF~~p----~iaAv~d~-----------------~~yFNSGVMVInPs~~ 323 (521)
||+++++. +++||||||+|+||++||++||+++ .++|+++. ..||||||||||++..
T Consensus 90 rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNsGV~linl~~~ 169 (276)
T 3tzt_A 90 RLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNSGLLLINLKRA 169 (276)
T ss_dssp HHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEEEEEEEEHHHH
T ss_pred HHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEeeEEEEEHHHH
Confidence 99999973 6999999999999999999999987 37887651 3799999999999875
Q ss_pred H----HHHHHHHHhhc-CCCCCCchhHHHHhcc-cceecCC-cccccccccCCChHHHHhhhhhcccCCCCCeEEEEecC
Q 043696 324 T----FQLLMDHIYEI-ESYNGGDQGYLNEIFT-WWHRIPK-HMNFLKHFWEGDEEEKKHMKIRLFGADPPILYVLHYLG 396 (521)
Q Consensus 324 ~----f~~L~e~l~~~-~sy~~~DQdiLN~vF~-~w~~LP~-~YN~l~~~~~~~~~~~~~~k~~~f~~~~~~~~IIHY~G 396 (521)
+ .+++++.+.+. .++.++|||+||.+|. +|+.||. +||++.++... ..........+....++++||||+|
T Consensus 170 R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~--~~~~~~~~~~~~~~~~~~~iiHy~g 247 (276)
T 3tzt_A 170 REEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSS--YLIRSKKQADLAWLMDHTVVLHFCG 247 (276)
T ss_dssp HHHCCHHHHHHHHHHC--------CHHHHHHHGGGEEEEEHHHHSEETTCHHH--HHHHTTTCCSHHHHHHHCCEEECCS
T ss_pred HhhhHHHHHHHHHHhccccccCCChhHHHHHHhCCEEECCchheeeecccchh--hhccccchhhhhhhccCCeEEEECC
Confidence 5 45666666553 3667899999999998 9999998 99998754210 0000000000011124689999999
Q ss_pred -CCCCCCCCCCCCCcccccchhccchhHHhHHHHHHhhhHH
Q 043696 397 -NKPWLCFRDYDCNWNVDILQEFASDIAHKTWWKVHDAMPE 436 (521)
Q Consensus 397 -~KPW~~~~~~d~nwn~~~~~~~~~d~~~~~WW~vyd~~p~ 436 (521)
.|||+.... ....+.||+|++...+
T Consensus 248 ~~KPW~~~~~---------------~~~~~~w~~Y~~~~~~ 273 (276)
T 3tzt_A 248 RDKPWKKNHR---------------NKFTSLYKHYMSLTKR 273 (276)
T ss_dssp SCCTTSTTCC---------------STTHHHHHHHHHHHHH
T ss_pred CCCCcCCCCC---------------CchHHHHHHHHHHHHH
Confidence 999986431 1246899998876544
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=99.97 E-value=5.2e-30 Score=260.85 Aligned_cols=207 Identities=21% Similarity=0.277 Sum_probs=147.8
Q ss_pred eecChhhHHHHHHHHHHH-HHhC-CCCcEEEEECCCCCHHHHHHHHHc----CceEEEEeeecC---Cccc-ccccchhh
Q 043696 195 LHSAHVYVCGAIAAAQSI-RMAG-STRDLVILVDETISDYHRGGLEAA----GWKIHTIQRIRN---PKAE-RDAYNEWN 264 (521)
Q Consensus 195 Lt~dd~Yl~gA~VL~~SL-r~~n-s~~dlvVLvtd~Is~e~~~~Lk~~----g~~v~~V~~I~~---p~~~-~~~~~~~t 264 (521)
+++|++|+.++.|+++|| ++++ ....++|+ ++++|++.++.|++. +.++..++.-.. .... ...++..+
T Consensus 5 ~~~d~~Y~~~~~vli~Sl~l~~~~~~~~f~il-~~~ls~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~ 83 (311)
T 1g9r_A 5 FAADDNYAAYLCVAAKSVEAAHPDTEIRFHVL-DAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLNIRHISITT 83 (311)
T ss_dssp EEECGGGHHHHHHHHHHHHHTCTTSCCEEEEE-ESSCCHHHHHHHHHHSGGGTTTEEEEECCGGGGTTSCCCCTTCCGGG
T ss_pred EECCHhHHHHHHHHHHHHHHHcCCCCceEEEE-ECCCCHHHHHHHHHHHHHcCCEEEEEEcCHHHHhcCccccccCCHHH
Confidence 345889999999999999 5543 23444554 678999998888875 665554432110 0000 12334578
Q ss_pred HHHHHHhcc-CCcceEEEeecCeeccCCchHhhcCC----CeeeecC-----------------CCCCccceEEEEecCH
Q 043696 265 YSKFRLWQL-TDYDKIIFIDADLLILRNIDFLFEMP----EITATGN-----------------NATLFNSGVMVVEPSN 322 (521)
Q Consensus 265 y~KL~lw~L-~eYDRVLYLDaD~LVl~nLDeLF~~p----~iaAv~d-----------------~~~yFNSGVMVInPs~ 322 (521)
|+||+++++ ++||||||||+|+||++||++||+++ .++|++| ...||||||||||++.
T Consensus 84 y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNsGv~linl~~ 163 (311)
T 1g9r_A 84 YARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGVLLINLKK 163 (311)
T ss_dssp GGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEEEEECHHH
T ss_pred HHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEeeeeeeeeHHH
Confidence 999999995 79999999999999999999999986 3777754 2469999999999986
Q ss_pred H----HHHHHHHHHhh-cCCCCCCchhHHHHhcc-cceecCCccccccccc------CCChHHHHhhhhhcccCCCCCeE
Q 043696 323 C----TFQLLMDHIYE-IESYNGGDQGYLNEIFT-WWHRIPKHMNFLKHFW------EGDEEEKKHMKIRLFGADPPILY 390 (521)
Q Consensus 323 ~----~f~~L~e~l~~-~~sy~~~DQdiLN~vF~-~w~~LP~~YN~l~~~~------~~~~~~~~~~k~~~f~~~~~~~~ 390 (521)
+ .++++++.+.+ ..++.++|||+||.+|. +|+.||.+||++.... .+.... ....+.+.....+++
T Consensus 164 ~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~~~~~Lp~~wN~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 241 (311)
T 1g9r_A 164 WRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWFASRHT--DPLYRDRTNTVMPVA 241 (311)
T ss_dssp HTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC----CSCC--CHHHHHHHSCCSSCS
T ss_pred HHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcCCEEEcChhhccCcchhhHHhhhcccccc--hhhhhHHhhccCCCE
Confidence 4 46777777765 34578899999999998 8999999999987431 100000 000001122345789
Q ss_pred EEEecC-CCCCCCCC
Q 043696 391 VLHYLG-NKPWLCFR 404 (521)
Q Consensus 391 IIHY~G-~KPW~~~~ 404 (521)
||||+| .|||....
T Consensus 242 iiHy~g~~KPW~~~~ 256 (311)
T 1g9r_A 242 VSHYCGPAKPWHRDC 256 (311)
T ss_dssp EEECCSSCCTTSSSC
T ss_pred EEEeCCcCCCCCCCC
Confidence 999999 89998643
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=77.78 E-value=14 Score=34.22 Aligned_cols=100 Identities=10% Similarity=0.084 Sum_probs=53.3
Q ss_pred EEEEEEeecChhhHHHHHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHc--CceEEEEeeecCCccc---ccccch
Q 043696 189 EAYATILHSAHVYVCGAIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAA--GWKIHTIQRIRNPKAE---RDAYNE 262 (521)
Q Consensus 189 ~AyVTlLt~dd~Yl~gA~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~--g~~v~~V~~I~~p~~~---~~~~~~ 262 (521)
...|+..+....|+.. ++.||... .++.. +|+++++-++++.+.++++ ...+..+. .+... ...-..
T Consensus 3 vSViIp~yn~~~~l~~---~l~Sl~~q~~~~~e-iivvDd~S~d~t~~~~~~~~~~~~i~~i~---~~~~~~~~~~~n~G 75 (255)
T 1qg8_A 3 VSVIMTSYNKSDYVAK---SISSILSQTFSDFE-LFIMDDNSNEETLNVIRPFLNDNRVRFYQ---SDISGVKERTEKTR 75 (255)
T ss_dssp EEEEEEESSCTTTHHH---HHHHHHTCSCCCEE-EEEEECSCCHHHHHHHGGGGGSTTEEEEE---CCCCSHHHHHSSCH
T ss_pred EEEEEEcCCCHHHHHH---HHHHHHhccCCceE-EEEEECCCCchHHHHHHHHhhcCCEEEEe---cccccccccccccC
Confidence 4455545555556554 55676643 33333 3456777777788888776 23333222 22000 000001
Q ss_pred hhHHHHHHhccCCcceEEEeecCeeccCC-chHh
Q 043696 263 WNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFL 295 (521)
Q Consensus 263 ~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeL 295 (521)
....+-...+....|-|++||+|.++..+ |..+
T Consensus 76 ~~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~ 109 (255)
T 1qg8_A 76 YAALINQAIEMAEGEYITYATDDNIYMPDRLLKM 109 (255)
T ss_dssp HHHHHHHHHHHCCCSEEEEEETTEEECTTHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCccChHHHHHH
Confidence 12233344455678999999999999765 4444
No 6
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=73.11 E-value=7.3 Score=35.71 Aligned_cols=97 Identities=13% Similarity=0.108 Sum_probs=52.1
Q ss_pred CCEEEEEEeecChhhHHHHHHHHHHHHHh-CCCCcEEEEECCCCCHHHHHHHHHc---CceEEEEeeecCCcccccccch
Q 043696 187 RREAYATILHSAHVYVCGAIAAAQSIRMA-GSTRDLVILVDETISDYHRGGLEAA---GWKIHTIQRIRNPKAERDAYNE 262 (521)
Q Consensus 187 ~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~-ns~~dlvVLvtd~Is~e~~~~Lk~~---g~~v~~V~~I~~p~~~~~~~~~ 262 (521)
++...|+..+....|+. -++.||... .++.. +|+++++-++.+.+.++++ ..+++.+. .+...
T Consensus 5 p~vsViIp~yn~~~~l~---~~l~Sl~~q~~~~~e-iIvvDd~S~d~t~~~~~~~~~~~~~i~~i~---~~n~G------ 71 (240)
T 3bcv_A 5 PKVSVIVPIYNVEKYLD---QCVQALLAQTLSDIE-IILIDDESPDNCPKICDDYAAQYPNIKVIH---KKNAG------ 71 (240)
T ss_dssp CSEEEEEEESSCTTTHH---HHHHHHHTCSSSSEE-EEEEECCCSSSHHHHHHHHHHHCSSEEEEE---CCCCC------
T ss_pred CcEEEEEecCCCHHHHH---HHHHHHHhCcCCCeE-EEEEECCCCcCHHHHHHHHHhhCCCEEEEE---CCCCC------
Confidence 34556665565556665 455676643 33333 3456666566666666553 23333332 11111
Q ss_pred hhHHHHHHhccCCcceEEEeecCeeccCC-chHhh
Q 043696 263 WNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLF 296 (521)
Q Consensus 263 ~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeLF 296 (521)
....+=...+....|-|++||+|.++..+ |..|.
T Consensus 72 ~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~ 106 (240)
T 3bcv_A 72 LGMACNSGLDVATGEYVAFCDSDDYVDSDMYMTMY 106 (240)
T ss_dssp HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHHHHH
Confidence 11223333444567899999999998765 44443
No 7
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=72.50 E-value=19 Score=37.00 Aligned_cols=96 Identities=17% Similarity=0.140 Sum_probs=56.6
Q ss_pred CCCEEEEEEeecChhhHHHHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCceEEEEe--eecCCcccccccch
Q 043696 186 ARREAYATILHSAHVYVCGAIAAAQSIRMAG-STRDLVILVDETISDYHRGGLEAAGWKIHTIQ--RIRNPKAERDAYNE 262 (521)
Q Consensus 186 ~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~n-s~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~--~I~~p~~~~~~~~~ 262 (521)
.++...|.-.++...++..++-.+.++.+.. .... +|+++|+-++.+.+.+++++.+++... .+..+.. ..
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~E-IIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n-----~G 166 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQ-ILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDA-----HG 166 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSE-EEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSC-----CS
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeE-EEEEcCcCCccHHHHHHHhCchhcccceeEecCCcc-----CC
Confidence 3445555555555677776666555543333 3444 455677777888888999887764321 1111110 01
Q ss_pred hhHHHHHHhccCCcceEEEeecCee
Q 043696 263 WNYSKFRLWQLTDYDKIIFIDADLL 287 (521)
Q Consensus 263 ~ty~KL~lw~L~eYDRVLYLDaD~L 287 (521)
.....-...+...+|-|+++|+|..
T Consensus 167 ~g~A~n~G~~~A~gd~i~~lDaD~~ 191 (387)
T 3f1y_A 167 KGDAMWRALSVTRGDLVLYIDADTR 191 (387)
T ss_dssp HHHHHHHHTTTCCSSEEEECCTTCS
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCCC
Confidence 1223444455567899999999998
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=72.12 E-value=7.3 Score=42.02 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=56.8
Q ss_pred CCCCEEEEEEeecChhhHHHHHHHHHHHHHhCC-CCc-EEEEECCCCCHHH-HHHHHHc---CceEEEEeeecCCccccc
Q 043696 185 RARREAYATILHSAHVYVCGAIAAAQSIRMAGS-TRD-LVILVDETISDYH-RGGLEAA---GWKIHTIQRIRNPKAERD 258 (521)
Q Consensus 185 ~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns-~~d-lvVLvtd~Is~e~-~~~Lk~~---g~~v~~V~~I~~p~~~~~ 258 (521)
..++...|+..+... +..+.-++.||..... ... -+|+++++-++.+ .+.|+++ ...++. +..+...
T Consensus 110 ~~P~vSVIIp~yNe~--~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~v---i~~~~n~-- 182 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEG--WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRI---LRTKKRE-- 182 (570)
T ss_dssp SCCCEEEEEEESSCC--HHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEE---EECSSCC--
T ss_pred CCCCeEEEEEECCCC--HHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEE---EECCCCC--
Confidence 345666666555432 4555667788877554 322 3456666655555 5555543 222322 2222110
Q ss_pred ccchhhHHHHHHhccCCcceEEEeecCeeccCC-chHhhc
Q 043696 259 AYNEWNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLFE 297 (521)
Q Consensus 259 ~~~~~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeLF~ 297 (521)
.....+-...+...-|-|++||+|+++..+ |..|..
T Consensus 183 ---G~~~A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~ 219 (570)
T 2d7i_A 183 ---GLIRTRMLGASVATGDVITFLDSHCEANVNWLPPLLD 219 (570)
T ss_dssp ---CHHHHHHHHHHHCCSSEEEECCSSEEECTTCSHHHHH
T ss_pred ---CHHHHHHHHHHhcCCCEEEEEcCCccccccHHHHHHH
Confidence 112234444455567999999999999665 555543
No 9
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=65.53 E-value=15 Score=37.90 Aligned_cols=104 Identities=13% Similarity=0.165 Sum_probs=54.9
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCC-CCc-EEEEECCCCCH-HHHHHHHHc---Cc-eEEEEeeecCCccc
Q 043696 184 ERARREAYATILHSAHVYVCGAIAAAQSIRMAGS-TRD-LVILVDETISD-YHRGGLEAA---GW-KIHTIQRIRNPKAE 256 (521)
Q Consensus 184 ~~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns-~~d-lvVLvtd~Is~-e~~~~Lk~~---g~-~v~~V~~I~~p~~~ 256 (521)
...++...|+..+... ...+.-++.||..... ... -+|+++++-++ +..+.|+++ .. +++.|. .+...
T Consensus 26 ~~~p~vSVIIp~yN~~--~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~---~~~n~ 100 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEA--WSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIR---MEQRS 100 (472)
T ss_dssp SCCCCEEEEEEESSCC--HHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEE---CSSCC
T ss_pred cCCCCeEEEEEeCCCC--HHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEE---CCCCC
Confidence 3455677776666443 1334456788877543 221 24456655444 355555543 21 333322 22110
Q ss_pred ccccchhhHHHHHHhccCCcceEEEeecCeeccCC-chHhhc
Q 043696 257 RDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLFE 297 (521)
Q Consensus 257 ~~~~~~~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeLF~ 297 (521)
.....+-...+....|-|++||+|+++..+ |..|.+
T Consensus 101 -----G~~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~ 137 (472)
T 1xhb_A 101 -----GLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLA 137 (472)
T ss_dssp -----CHHHHHHHHHHHCCSSEEEEEESSEEECTTCHHHHHH
T ss_pred -----ChHHHHHHHHHhccCCeEEEECCCeEeCccHHHHHHH
Confidence 012233344455668999999999998766 555543
No 10
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=58.91 E-value=46 Score=33.87 Aligned_cols=100 Identities=9% Similarity=0.135 Sum_probs=56.2
Q ss_pred EeecChhhHHHHHHHHHHHHHhCCC--CcEEEEECCCCCHHHHHHHHHcCceEEEEeeecC---Cccc--ccc--cch--
Q 043696 194 ILHSAHVYVCGAIAAAQSIRMAGST--RDLVILVDETISDYHRGGLEAAGWKIHTIQRIRN---PKAE--RDA--YNE-- 262 (521)
Q Consensus 194 lLt~dd~Yl~gA~VL~~SLr~~ns~--~dlvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~---p~~~--~~~--~~~-- 262 (521)
+.+.|.. . +.-++.||++..+. ...+|+.+|+-.++.++.+++.+.++..+..-.. +... ... +..
T Consensus 8 I~~yNRp--~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~~I~~~~~~d~~~~~~~~~N~g~~~y~~ia 84 (343)
T 1fo8_A 8 VIACDRS--T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQGYYKIA 84 (343)
T ss_dssp EEESSCT--T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGHHHHHHH
T ss_pred EEECCcH--H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCCceEEEEcCCccccccchhhcCcccchhHh
Confidence 3444543 3 67788899887643 2356666777788888888887654433321110 0000 000 000
Q ss_pred --hhHHHHHHhccCCcceEEEeecCeeccCCchHhh
Q 043696 263 --WNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLF 296 (521)
Q Consensus 263 --~ty~KL~lw~L~eYDRVLYLDaD~LVl~nLDeLF 296 (521)
..+..=.+++...+++||+||-|+++-.+.=+.|
T Consensus 85 ~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~ 120 (343)
T 1fo8_A 85 RHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYF 120 (343)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHH
T ss_pred HHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHH
Confidence 0111112344447999999999999987754444
No 11
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=49.75 E-value=1.3e+02 Score=31.31 Aligned_cols=104 Identities=18% Similarity=0.175 Sum_probs=53.4
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHhCC-CCc-EEEEECCCCCHHHHHHHHHcCceEEEEeeecCCcccccccc
Q 043696 184 ERARREAYATILHSAHVYVCGAIAAAQSIRMAGS-TRD-LVILVDETISDYHRGGLEAAGWKIHTIQRIRNPKAERDAYN 261 (521)
Q Consensus 184 ~~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns-~~d-lvVLvtd~Is~e~~~~Lk~~g~~v~~V~~I~~p~~~~~~~~ 261 (521)
...++...|+..+.... ..+.-++.||..... ... -+|+++++-++.+...+.+....++.| ..+...
T Consensus 63 ~~~p~vSVIIp~yN~~~--~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi---~~~~n~----- 132 (501)
T 2ffu_A 63 VDLPATSVVITFHNEAR--SALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVL---RNDRRE----- 132 (501)
T ss_dssp SSCCCEEEEEEESSCCH--HHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEE---ECSSCC-----
T ss_pred cCCCCEEEEEEeCcCcH--HHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCCEEEE---ECCCCc-----
Confidence 34556666665554332 134456678776543 221 245566655554433332222233222 222110
Q ss_pred hhhHHHHHHhccCCcceEEEeecCeeccCC-chHhhc
Q 043696 262 EWNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLFE 297 (521)
Q Consensus 262 ~~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeLF~ 297 (521)
.....+-...+....|-|++||+|+++..+ |..|.+
T Consensus 133 G~~~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~ 169 (501)
T 2ffu_A 133 GLMRSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLE 169 (501)
T ss_dssp HHHHHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHH
T ss_pred CHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHH
Confidence 112344444555678999999999998765 455543
No 12
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=48.48 E-value=53 Score=32.28 Aligned_cols=103 Identities=18% Similarity=0.155 Sum_probs=58.3
Q ss_pred CCCEEEEEEeecChhhHHHHHHHHHHHHHhC-CCCcEEEEECCCCCHHHHHHHHHcCceEEE-Eeeec-CCcccccccch
Q 043696 186 ARREAYATILHSAHVYVCGAIAAAQSIRMAG-STRDLVILVDETISDYHRGGLEAAGWKIHT-IQRIR-NPKAERDAYNE 262 (521)
Q Consensus 186 ~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~n-s~~dlvVLvtd~Is~e~~~~Lk~~g~~v~~-V~~I~-~p~~~~~~~~~ 262 (521)
.++...|.-.+....|+. -++.||.... +...-+|+++++-++.+.+.+++++.++.. +..+. .+... .
T Consensus 47 ~~~vSViIp~yN~~~~l~---~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~-----G 118 (329)
T 3ckj_A 47 GRTISVVLPALDEEDTIG---SVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRP-----G 118 (329)
T ss_dssp TCCEEEEEEESSCTTTHH---HHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCC-----S
T ss_pred CCcEEEEEeeCCCHHHHH---HHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCC-----C
Confidence 345556665565556654 4556666543 322234557777777888889988877543 22221 11110 1
Q ss_pred hhHHHHHHhccCCcceEEEeecCee-ccCC-chHhh
Q 043696 263 WNYSKFRLWQLTDYDKIIFIDADLL-ILRN-IDFLF 296 (521)
Q Consensus 263 ~ty~KL~lw~L~eYDRVLYLDaD~L-Vl~n-LDeLF 296 (521)
....+-...+....|-|++||+|.+ +..+ |..|.
T Consensus 119 ~~~a~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~ 154 (329)
T 3ckj_A 119 KGEALWRSLAASRGDIVVFVDSDLINPHPMFVPWLV 154 (329)
T ss_dssp HHHHHHHHHHHCCCSEEEECCTTEESCCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCcChHHHHHHH
Confidence 1222333344557799999999999 6544 55543
No 13
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=46.20 E-value=71 Score=34.12 Aligned_cols=99 Identities=8% Similarity=-0.015 Sum_probs=53.9
Q ss_pred CCEEEEEEeecChhhHHHHHHHHHHHHHhCCCCcE-EEEECCCCCHHHHHHHHHcCc--eEEEEeeecCCcccccccchh
Q 043696 187 RREAYATILHSAHVYVCGAIAAAQSIRMAGSTRDL-VILVDETISDYHRGGLEAAGW--KIHTIQRIRNPKAERDAYNEW 263 (521)
Q Consensus 187 ~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~ns~~dl-vVLvtd~Is~e~~~~Lk~~g~--~v~~V~~I~~p~~~~~~~~~~ 263 (521)
++...++..+... ..+.-++.||.......++ +|+++++-+++..+.++++.. .+..+.. +.... ..
T Consensus 93 p~vsviIp~~n~~---~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~i~~---~~~~~----g~ 162 (625)
T 2z86_A 93 DGLSIVIPTYNRA---KILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKYVRQ---KDYGY----QL 162 (625)
T ss_dssp CCEEEEEEESSCH---HHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEEEEE---CCCSC----CH
T ss_pred CcEEEEEecCCcH---HHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEEEEe---CCCCc----ch
Confidence 4566665555433 3445577888765432243 345666666667777776532 2322221 11100 01
Q ss_pred hHHHHHHhccCCcceEEEeecCeeccCC-chHh
Q 043696 264 NYSKFRLWQLTDYDKIIFIDADLLILRN-IDFL 295 (521)
Q Consensus 264 ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeL 295 (521)
...+-...+....|-|++||+|+++..+ |..+
T Consensus 163 ~~a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~ 195 (625)
T 2z86_A 163 CAVRNLGLRAAKYNYVAILDCDMAPNPLWVQSY 195 (625)
T ss_dssp HHHHHHHHHHCCSSEEEEECTTEEECTTHHHHH
T ss_pred hHHHHHHHHhCCcCEEEEECCCCCCCHHHHHHH
Confidence 1233334455678999999999999765 3333
No 14
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=41.82 E-value=50 Score=31.42 Aligned_cols=58 Identities=14% Similarity=0.233 Sum_probs=34.2
Q ss_pred HHHHHhccCCcceEEEeecCeeccC-----CchHhhcCCC--e-e-eecC---CCCCccceEEEEecCHH
Q 043696 266 SKFRLWQLTDYDKIIFIDADLLILR-----NIDFLFEMPE--I-T-ATGN---NATLFNSGVMVVEPSNC 323 (521)
Q Consensus 266 ~KL~lw~L~eYDRVLYLDaD~LVl~-----nLDeLF~~p~--i-a-Av~d---~~~yFNSGVMVInPs~~ 323 (521)
.|-.+-..++.+-+-|||+|.+|.. .|..-.++.. + - .-.+ ..--+|+|+++|..+.-
T Consensus 63 IR~AM~khPeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~~~lNtGvfL~~~~~~ 132 (213)
T 2p6w_A 63 IQQAAEKFPSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGSYPINTGVKFVHKDAL 132 (213)
T ss_dssp HHHHHHHCTTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSSSSCCTTEEEEEGGGH
T ss_pred HHHHHHHCCCceEEEEecCCceeecCCCCCcHHHccccccCceeeccccccccccccccceeeeecccch
Confidence 4444455689999999999999982 1211112111 1 0 0011 11257999999987653
No 15
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=31.44 E-value=1.4e+02 Score=30.51 Aligned_cols=112 Identities=17% Similarity=0.285 Sum_probs=71.9
Q ss_pred CCCCCEEEEEEeecChhhHHHHHHHHHHHHHh-CC--CCcEEEEECCCCCHHHHHHHHHcC---ceEEEEee--ecCCcc
Q 043696 184 ERARREAYATILHSAHVYVCGAIAAAQSIRMA-GS--TRDLVILVDETISDYHRGGLEAAG---WKIHTIQR--IRNPKA 255 (521)
Q Consensus 184 ~~~~r~AyVTlLt~dd~Yl~gA~VL~~SLr~~-ns--~~dlvVLvtd~Is~e~~~~Lk~~g---~~v~~V~~--I~~p~~ 255 (521)
....+-|+|+++- | .=|.+++-+++||-.. |. .||.|+|.+...+++.++.++++- ++...|.. ...|..
T Consensus 24 ~~r~nAtfV~L~R-N-~el~~~l~Si~~vE~rFN~~y~YpwvFlNd~pFteeFk~~~~~~~sg~v~Fg~Ip~e~W~~P~~ 101 (348)
T 1s4n_A 24 AGKPKACYVTLVR-N-KELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEHWSYPEW 101 (348)
T ss_dssp CSCCCEEEEEECC-G-GGHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEECCGGGSSCCTT
T ss_pred CCCCceEEEEEec-c-HHHHHHHHHHHHHHHHhhccCCCCEEEecCCCCCHHHHHHHHHhcCcceEEEEcCHHHcCCCCC
Confidence 3567888998765 3 4589999999999764 44 789999999999999988887753 22222221 112321
Q ss_pred c-----c---------cccch-hh------HHHHHHhc---cCCcceEEEeecCeeccCCch-Hhhc
Q 043696 256 E-----R---------DAYNE-WN------YSKFRLWQ---LTDYDKIIFIDADLLILRNID-FLFE 297 (521)
Q Consensus 256 ~-----~---------~~~~~-~t------y~KL~lw~---L~eYDRVLYLDaD~LVl~nLD-eLF~ 297 (521)
. . -.+.. .+ |.--+.|+ |.+|+-.-=+++|+-+..+|+ ++|.
T Consensus 102 Id~~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~h~~l~~YdyYWRvEPdv~~~CDi~YDpF~ 168 (348)
T 1s4n_A 102 INQTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFK 168 (348)
T ss_dssp SCHHHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHH
T ss_pred cCHHHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhccCcccccCceEEEeCCCceeecCCCCCccH
Confidence 0 0 00111 11 22223343 578999999999999999986 4554
No 16
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=31.12 E-value=1.5e+02 Score=31.55 Aligned_cols=97 Identities=10% Similarity=0.028 Sum_probs=51.4
Q ss_pred CCEEEEEEeecChhhHHHHHHHHHHHHH-hCCCCcEEEEECCCCCHHHHHHHHHc---CceEEEEeeecCCcccccccch
Q 043696 187 RREAYATILHSAHVYVCGAIAAAQSIRM-AGSTRDLVILVDETISDYHRGGLEAA---GWKIHTIQRIRNPKAERDAYNE 262 (521)
Q Consensus 187 ~r~AyVTlLt~dd~Yl~gA~VL~~SLr~-~ns~~dlvVLvtd~Is~e~~~~Lk~~---g~~v~~V~~I~~p~~~~~~~~~ 262 (521)
++.+.++..+....|+. -++.||.. +.++..+ |+++++-++.+.+.++++ ...+..+.. +.. .
T Consensus 375 ~~vsiii~~yn~~~~l~---~~l~s~~~q~~~~~ei-ivvdd~S~d~t~~~~~~~~~~~~~i~~~~~---~n~------G 441 (625)
T 2z86_A 375 PLVSIYIPAYNCSKYIV---RCVESALNQTITDLEV-CICDDGSTDDTLRILQEHYANHPRVRFISQ---KNK------G 441 (625)
T ss_dssp CSEEEEEEESSCTTTHH---HHHHHHHSSSCCSEEE-EEEEESCSSSHHHHHHHHHTTCTTEEEEEE---CCC------C
T ss_pred CeEEEEEeCCCCHHHHH---HHHHHHHhCcCCCeEE-EEEECcCChhHHHHHHHHHhhCCcEEEEeC---CCC------C
Confidence 45666666565556654 44566654 3333333 455665556666666654 223332221 111 0
Q ss_pred hhHHHHHHhccCCcceEEEeecCeeccCC-chHhh
Q 043696 263 WNYSKFRLWQLTDYDKIIFIDADLLILRN-IDFLF 296 (521)
Q Consensus 263 ~ty~KL~lw~L~eYDRVLYLDaD~LVl~n-LDeLF 296 (521)
....+-...+....|-|++||+|.++..+ |..+.
T Consensus 442 ~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~ 476 (625)
T 2z86_A 442 IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCL 476 (625)
T ss_dssp HHHHHHHHHHHCCSSEEEECCTTCEECTTHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcccChhHHHHHH
Confidence 11122233344567889999999998765 44443
No 17
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=26.86 E-value=64 Score=32.29 Aligned_cols=168 Identities=11% Similarity=0.144 Sum_probs=88.4
Q ss_pred CCCCEEEEEEeecChhhH-HHHHHHHHHHHHhC-CCCcEEE-EECCC---CCHHHHHHHHHcC-ceEEEEeeecCCcccc
Q 043696 185 RARREAYATILHSAHVYV-CGAIAAAQSIRMAG-STRDLVI-LVDET---ISDYHRGGLEAAG-WKIHTIQRIRNPKAER 257 (521)
Q Consensus 185 ~~~r~AyVTlLt~dd~Yl-~gA~VL~~SLr~~n-s~~dlvV-Lvtd~---Is~e~~~~Lk~~g-~~v~~V~~I~~p~~~~ 257 (521)
..-+.+...+.+ ..|+ .-.--.+.|--++- .++..+. +.||+ ++.- .++ -+-+.|-.+. ..
T Consensus 46 ~n~tIGl~vfa~--GkY~~~fl~~Fl~SAEk~Fm~g~~v~YYVFTD~~~~~p~v------~l~~~r~~~V~~i~--~~-- 113 (289)
T 1o7q_A 46 QKITVGLTVFAV--GRYIEHYLEEFLTSANKHFMVGHPVIFYIMVDDVSRMPLI------ELGPLRSFKVFKIK--PE-- 113 (289)
T ss_dssp HTCCEEEEEEEC--TTHHHHHHHHHHHHHHHHBSTTSCEEEEEEESCGGGCCCC------CCCTTEEEEEEECC--CC--
T ss_pred hCCeEEEEEEEe--cccHHHHHHHHHHHHHHhccCCCeEEEEEEeCChhhCCcc------ccCCCCeEEEEEec--cc--
Confidence 445566555444 3798 77788888888762 4455432 34443 2210 011 1111222221 11
Q ss_pred cccchhhHHHHHHh------c-cCCcceEEEeecCeeccCCchHhhcCCCeeee-------------------------c
Q 043696 258 DAYNEWNYSKFRLW------Q-LTDYDKIIFIDADLLILRNIDFLFEMPEITAT-------------------------G 305 (521)
Q Consensus 258 ~~~~~~ty~KL~lw------~-L~eYDRVLYLDaD~LVl~nLDeLF~~p~iaAv-------------------------~ 305 (521)
..+...+..|+.++ . +.+.|-+.++|+||++.+++..= .+.++-|+ +
T Consensus 114 ~~W~d~sm~Rm~~i~~~~~~~~~~evDYLf~~dvd~~F~~~vG~E-~Lg~lv~~lHp~~y~~~~~~fpYERrp~S~AyIp 192 (289)
T 1o7q_A 114 KRWQDISMMRMKTIGEHIVAHIQHEVDFLFCMDVDQVFQDKFGVE-TLGESVAQLQAWWYKADPNDFTYERRKESAAYIP 192 (289)
T ss_dssp SSHHHHHHHHHHHHHHHHHHTHHHHCSEEEEECSSEEECSCBCGG-GCSSEEEEECTTTTTSCGGGSCCCCCTTSTTCCC
T ss_pred cCCchhHHHHHHHHHHHHHHHHhhcCCEEEEeeCCcEeeccCCHH-HHHHHHHccCHHHhCCCCCCCCCCCCcCceeeec
Confidence 11222355555444 2 35799999999999999987442 11222111 1
Q ss_pred -C-CCCCccceEEEEecCH------HHHHHHHHHHh-hcCCCCCCchhHHHHhcc---cceecCCcccccccc
Q 043696 306 -N-NATLFNSGVMVVEPSN------CTFQLLMDHIY-EIESYNGGDQGYLNEIFT---WWHRIPKHMNFLKHF 366 (521)
Q Consensus 306 -d-~~~yFNSGVMVInPs~------~~f~~L~e~l~-~~~sy~~~DQdiLN~vF~---~w~~LP~~YN~l~~~ 366 (521)
+ ..-|+-+|+.-=.+.. .-.+.|++-.. ...+ ...|..-||.+|- ..+.||..|+....+
T Consensus 193 ~~eGdfYY~Ga~fGGt~~~vl~l~~~c~~~i~~D~~n~I~A-~wHDESHLNKYf~~~KPtKvLSPEY~wd~~~ 264 (289)
T 1o7q_A 193 FGEGDFYYHAAIFGGTPTQVLNITQECFKGILKDKKNDIEA-QWHDESHLNKYFLLNKPTKILSPEYCWDYHI 264 (289)
T ss_dssp TTCCSCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTCCC-TTTHHHHHHHHHHHSCCSEEECGGGSBCGGG
T ss_pred CCCCCEEEEceeeCCcHHHHHHHHHHHHHHHHHHHhCCeEE-EecchhhhhHHHhhcCCCEEECHHHCCCccc
Confidence 1 2356667766444432 11222222222 2323 5789999999974 456799999875543
No 18
>3lw5_N Photosystem I-N subunit, photosystem I reaction center subunit IX; photosynthesis, electron transfer, membrane proteins, large, complexes, chromophore; HET: CLA PQN BCR LMU LMG; 3.30A {Pisum sativum} PDB: 2o01_N*
Probab=20.61 E-value=11 Score=30.61 Aligned_cols=34 Identities=15% Similarity=0.288 Sum_probs=26.8
Q ss_pred hhhcCCCCccEEEEEeecccCCcccccchhhhhc
Q 043696 111 IASSSKGLHPVHVLLVTECFPIPNLFTCKDIVVR 144 (521)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~c~p~~~~f~c~~~~~~ 144 (521)
||.||......|-|-.+.|.=..|+|-|++|.+.
T Consensus 22 laTS~ANfaRs~TV~~G~C~FP~Nf~GCq~~a~~ 55 (85)
T 3lw5_N 22 LATTGANFARAYTVEFGSCKFPENFTGCQDLAKQ 55 (85)
T ss_dssp CCSSSSSSTTTSSCCCSCSSCCSCCSCSSSCCCT
T ss_pred hhhcccchhheeEeecccccCCccccchHHHHhc
Confidence 4555555556677888999999999999999776
Done!