Query 043698
Match_columns 171
No_of_seqs 131 out of 1052
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 12:41:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043698.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043698hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 2.9E-29 9.8E-34 228.8 17.3 167 1-167 824-1029(1034)
2 3ar4_A Sarcoplasmic/endoplasmi 99.9 1.1E-25 3.6E-30 204.7 18.0 163 1-163 800-994 (995)
3 2zxe_A Na, K-ATPase alpha subu 99.9 3.2E-26 1.1E-30 208.6 12.5 167 1-168 819-1024(1028)
4 1mhs_A Proton pump, plasma mem 99.7 1.4E-17 4.8E-22 150.0 9.7 151 1-164 729-884 (920)
5 3b8c_A ATPase 2, plasma membra 98.9 1.3E-12 4.4E-17 117.6 -12.2 149 2-161 684-844 (885)
6 1kf6_D Fumarate reductase 13 k 18.8 26 0.00088 23.5 0.1 12 19-30 2-13 (119)
7 2voy_D Sarcoplasmic/endoplasmi 18.1 99 0.0034 14.7 3.4 21 36-56 3-23 (26)
8 2iub_A CORA, divalent cation t 17.2 1.7E+02 0.0057 23.0 4.6 40 122-161 318-361 (363)
9 3ukw_C Bimax1 peptide; arm rep 13.7 1.1E+02 0.0037 14.4 1.6 13 15-27 13-25 (28)
10 4ev6_A Magnesium transport pro 13.4 1.9E+02 0.0067 22.3 4.0 8 122-129 294-301 (339)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=99.96 E-value=2.9e-29 Score=228.78 Aligned_cols=167 Identities=13% Similarity=0.159 Sum_probs=140.2
Q ss_pred CchhhhhhhcCCCCCccccCCCCCCC-CCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHhhcccCC---------------
Q 043698 1 MDTLGALALATEQPTNDLMSKPPVGR-SEPLITKLMWRNL-IPQAIYQVTILLTLQFKGRSIFGV--------------- 63 (171)
Q Consensus 1 tD~~palaL~~ep~~~~~M~r~PR~~-~~~i~~~~~~~~i-~~~g~~~~~~~~~~~~~~~~~~~~--------------- 63 (171)
||++|+++|++||+|+|+|+||||++ ++++++++++.++ +..|++++++++..|++.+...|.
T Consensus 824 ~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 903 (1034)
T 3ixz_A 824 TDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENH 903 (1034)
T ss_pred HHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccc
Confidence 68999999999999999999999998 6999999987665 456888888888877643211010
Q ss_pred ---C-----------------ccchhhHHHHHHHHHHHHHHHHhhccCCccccccccccHHHHHHHHHHHHHHHH--HHH
Q 043698 64 ---N-----------------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLI--MVE 121 (171)
Q Consensus 64 ---~-----------------~~~a~T~~F~~lv~~q~~~~~~~Rs~~~~~~~~~~~~N~~l~~~i~~~~~l~~~--~vp 121 (171)
+ ...+||++|++++++|++|+++||+.+.+.+..++++|+++++++++++++|++ ++|
T Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p 983 (1034)
T 3ixz_A 904 HLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCP 983 (1034)
T ss_pred cccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhh
Confidence 0 123899999999999999999999965533445889999999999999999874 589
Q ss_pred hhhhhcccccCChhHHHHHHHHHHHHHHHHHHHHhcccCCcchhhh
Q 043698 122 FLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPVSGTQLLFK 167 (171)
Q Consensus 122 ~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~i~r~~~~~~~~ 167 (171)
+++.+|++.|+++.+|++++++++++++++|++|++.|++++.-..
T Consensus 984 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~~~ 1029 (1034)
T 3ixz_A 984 GMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSWWD 1029 (1034)
T ss_pred hHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhh
Confidence 9999999999999999999999999999999999999988765443
No 2
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=99.94 E-value=1.1e-25 Score=204.74 Aligned_cols=163 Identities=20% Similarity=0.205 Sum_probs=138.0
Q ss_pred CchhhhhhhcCCCCCccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh-cccCC----------------
Q 043698 1 MDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGR-SIFGV---------------- 63 (171)
Q Consensus 1 tD~~palaL~~ep~~~~~M~r~PR~~~~~i~~~~~~~~i~~~g~~~~~~~~~~~~~~~-~~~~~---------------- 63 (171)
+|++|+++|++||+|+++|+||||++++++++++++.+++..|+++++.+++.|.+.. ...+.
T Consensus 800 ~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (995)
T 3ar4_A 800 TDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTE 879 (995)
T ss_dssp TTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSS
T ss_pred HHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccc
Confidence 6899999999999999999999999999999999988888899988887776554321 00000
Q ss_pred -------------CccchhhHHHHHHHHHHHHHHHHhhccCCccccccccccHHHHHHHHHHHHHHHH--HHHhhhhhcc
Q 043698 64 -------------NESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLI--MVEFLKKFAD 128 (171)
Q Consensus 64 -------------~~~~a~T~~F~~lv~~q~~~~~~~Rs~~~~~~~~~~~~N~~l~~~i~~~~~l~~~--~vp~l~~~f~ 128 (171)
+...+||++|++++++|++|.++||+.+++.+..+.++|++++++++++++++++ ++|+++++|+
T Consensus 880 ~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~ 959 (995)
T 3ar4_A 880 DHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPMIFK 959 (995)
T ss_dssp CCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTT
T ss_pred ccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0125899999999999999999999976544446788999999999999888764 4799999999
Q ss_pred cccCChhHHHHHHHHHHHHHHHHHHHHhcccCCcc
Q 043698 129 TERLNWGQWAACIGIAAMSWPIGFLFKCIPVSGTQ 163 (171)
Q Consensus 129 ~~~l~~~~w~~~~~~~~~~~~~~e~~K~i~r~~~~ 163 (171)
+.|+++.+|++++++++..++++|++|++.|++++
T Consensus 960 ~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~ 994 (995)
T 3ar4_A 960 LKALDLTQWLMVLKISLPVIGLDEILKFIARNYLE 994 (995)
T ss_dssp CCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHSCC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999887654
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=99.93 E-value=3.2e-26 Score=208.62 Aligned_cols=167 Identities=17% Similarity=0.096 Sum_probs=137.0
Q ss_pred CchhhhhhhcCCCCCccccCCCCCCCCC-CCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCC---------------
Q 043698 1 MDTLGALALATEQPTNDLMSKPPVGRSE-PLITKLMWRN-LIPQAIYQVTILLTLQFKGRSIFGV--------------- 63 (171)
Q Consensus 1 tD~~palaL~~ep~~~~~M~r~PR~~~~-~i~~~~~~~~-i~~~g~~~~~~~~~~~~~~~~~~~~--------------- 63 (171)
||++|+++|++||+++++|+||||++++ ++++++++.. ++..|+++++++++.|++.+...|.
T Consensus 819 ~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 898 (1028)
T 2zxe_A 819 TDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDR 898 (1028)
T ss_dssp TTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCT
T ss_pred HHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccc
Confidence 6899999999999999999999999876 9999998766 4567888888877776542210010
Q ss_pred -----------C---------ccchhhHHHHHHHHHHHHHHHHhhccCCccccccccccHHHHHHHHHHHHHHHH--HHH
Q 043698 64 -----------N---------ESVKDTMIFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLI--MVE 121 (171)
Q Consensus 64 -----------~---------~~~a~T~~F~~lv~~q~~~~~~~Rs~~~~~~~~~~~~N~~l~~~i~~~~~l~~~--~vp 121 (171)
+ ..++||++|++++++|++|.++||+.+. +++...++|+++++++++++++|++ ++|
T Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~-~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p 977 (1028)
T 2zxe_A 899 WISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRN-SIFQQGMKNKILIFGLFEETALAAFLSYCP 977 (1028)
T ss_dssp TCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSS-CHHHHCSCCHHHHHHHHHHHHHHHHHHHST
T ss_pred cccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCc-chhccCCcCHHHHHHHHHHHHHHHHHHHhh
Confidence 0 0258999999999999999999999644 5554338999999999999998875 478
Q ss_pred hhhhhcccccCChhHHHHHHHHHHHHHHHHHHHHhcccCCcchhhhh
Q 043698 122 FLKKFADTERLNWGQWAACIGIAAMSWPIGFLFKCIPVSGTQLLFKQ 168 (171)
Q Consensus 122 ~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~i~r~~~~~~~~~ 168 (171)
+++.+|++.|+++.+|++++++++..+++.|++|++.|++++.-+.+
T Consensus 978 ~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~~~~~~~~ 1024 (1028)
T 2zxe_A 978 GTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRSPGGWVEQ 1024 (1028)
T ss_dssp THHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHCTTSHHHH
T ss_pred hHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCcchhHh
Confidence 99999999999999999999999999999999999988765544444
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=99.72 E-value=1.4e-17 Score=150.02 Aligned_cols=151 Identities=13% Similarity=0.028 Sum_probs=114.5
Q ss_pred CchhhhhhhcCCCCCccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cC--CCccchhhHHHHH
Q 043698 1 MDTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSI---FG--VNESVKDTMIFNT 75 (171)
Q Consensus 1 tD~~palaL~~ep~~~~~M~r~PR~~~~~i~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~---~~--~~~~~a~T~~F~~ 75 (171)
+|. |+++|++||++++ ||||+++++ +++..++..|++++.+++..|.+.+.. .+ .+..++||++|++
T Consensus 729 ~d~-~~lal~~e~~~~~---~~P~~~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~ 800 (920)
T 1mhs_A 729 ADV-ATLAIAYDNAPYS---QTPVKWNLP----KLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQ 800 (920)
T ss_dssp HTT-HHHHCCCCCSGGG---GSCCCCCSS----SCSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHH
T ss_pred HHH-HhhhhcccCcccc---cCCCCchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHH
Confidence 355 8999999999876 788887753 333345567777777777766543321 01 1235789999999
Q ss_pred HHHHHHHHHHHhhccCCccccccccccHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHHHHHHHH
Q 043698 76 FVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWPIGFLFK 155 (171)
Q Consensus 76 lv~~q~~~~~~~Rs~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~vp~l~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K 155 (171)
++++|+++.+++|+.+ .++.+ +.|++++.++++..++++. +|+++ +|++.|+++.+|+.+++++++++++.|+.|
T Consensus 801 lv~~~~~~~~~~R~~~--~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k 875 (920)
T 1mhs_A 801 ISLTENWLIFITRANG--PFWSS-IPSWQLSGAIFLVDILATC-FTIWG-WFEHSDTSIVAVVRIWIFSFGIFCIMGGVY 875 (920)
T ss_dssp HHHHHHHHTTSSSCSS--SCSCC-SCTHHHHHHHHHHHHHHHH-HHSSS-STTSCSHHHHTHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccch--hhhcC-chHHHHHHHHHHHHHHHHH-HHHhh-hhccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999954 35554 4788888887777776664 34444 899999999999999999999999999999
Q ss_pred hcccCCcch
Q 043698 156 CIPVSGTQL 164 (171)
Q Consensus 156 ~i~r~~~~~ 164 (171)
++.+++..+
T Consensus 876 ~~~~~~~~f 884 (920)
T 1mhs_A 876 YILQDSVGF 884 (920)
T ss_dssp HCCCCCCTT
T ss_pred HHHhhhHHH
Confidence 998776443
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=98.93 E-value=1.3e-12 Score=117.61 Aligned_cols=149 Identities=14% Similarity=0.113 Sum_probs=94.4
Q ss_pred chhhhhhhcCCCCCccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc------cCCC-----ccchhh
Q 043698 2 DTLGALALATEQPTNDLMSKPPVGRSEPLITKLMWRNLIPQAIYQVTILLTLQFKGRSI------FGVN-----ESVKDT 70 (171)
Q Consensus 2 D~~palaL~~ep~~~~~M~r~PR~~~~~i~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~------~~~~-----~~~a~T 70 (171)
|+.+ +++++|++++ ||++++..+ +.++...+..|.++++.++..|++.... ++.+ ..++||
T Consensus 684 d~~~-l~l~~~~~~~------~~~p~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t 755 (885)
T 3b8c_A 684 DGTI-MTISKDRVKP------SPTPDSWKL-KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMG 755 (885)
T ss_dssp HTTT-CCCCCCCCCC------SSCCCSTTT-TTTTTTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHT
T ss_pred HHHH-HhhcccccCc------ccCCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHH
Confidence 4544 8888888655 344444444 4444446677778888777766544321 1211 234555
Q ss_pred H-HHHHHHHHHHHHHHHhhccCCccccccccccHHHHHHHHHHHHHHHHHHHhhhhhcccccCChhHHHHHHHHHHHHHH
Q 043698 71 M-IFNTFVLCQIFNEFNARKLEKKNIFKGIHKNKLFLAIIGITIVLQLIMVEFLKKFADTERLNWGQWAACIGIAAMSWP 149 (171)
Q Consensus 71 ~-~F~~lv~~q~~~~~~~Rs~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~vp~l~~~f~~~~l~~~~w~~~~~~~~~~~~ 149 (171)
+ +|.+++++|+ +.+++|+.+ .+++.+. .|++++..++..++++++.+.+-..++++.|+++.+|+++++.+++.++
T Consensus 756 ~~~~~~~~~~~~-~~~~~Rs~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 832 (885)
T 3b8c_A 756 AVYLQVSIISQA-LIFVTRSRS-WSFVERP-GALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYF 832 (885)
T ss_dssp TTTTTTSSTTGG-GTTCSSSCT-TTSTTST-TTTTSGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTH
T ss_pred HHHHHHHHHHHH-HHHHhccCC-CCcccCc-cHHHHHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHH
Confidence 4 5667888886 899999964 3444322 4554444444434444433322224467999999999999999999999
Q ss_pred HHHHHHhcccCC
Q 043698 150 IGFLFKCIPVSG 161 (171)
Q Consensus 150 ~~e~~K~i~r~~ 161 (171)
+.|++|++.|+.
T Consensus 833 ~~e~~k~~~~~~ 844 (885)
T 3b8c_A 833 PLDVFKFAIRYI 844 (885)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHh
Confidence 999999987763
No 6
>1kf6_D Fumarate reductase 13 kDa hydrophobic protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: f.21.2.2 PDB: 1kfy_D* 1l0v_D* 2b76_D* 3cir_D* 3p4p_D* 3p4q_D* 3p4r_D* 3p4s_D*
Probab=18.77 E-value=26 Score=23.51 Aligned_cols=12 Identities=25% Similarity=0.559 Sum_probs=8.8
Q ss_pred cCCCCCCCCCCC
Q 043698 19 MSKPPVGRSEPL 30 (171)
Q Consensus 19 M~r~PR~~~~~i 30 (171)
|++.|++.+||+
T Consensus 2 ~~~~pkRS~EPi 13 (119)
T 1kf6_D 2 INPNPKRSDEPV 13 (119)
T ss_dssp CCSSCCCCSHHH
T ss_pred CCCCcCcCCCCc
Confidence 677788878754
No 7
>2voy_D Sarcoplasmic/endoplasmic reticulum calcium ATPase 1; hydrolasep-type ATPase, cryo-EM, helical reconstruction, membrane protein; 17.50A {Oryctolagus cuniculus}
Probab=18.11 E-value=99 Score=14.74 Aligned_cols=21 Identities=5% Similarity=-0.114 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 043698 36 WRNLIPQAIYQVTILLTLQFK 56 (171)
Q Consensus 36 ~~~i~~~g~~~~~~~~~~~~~ 56 (171)
..+.+..|+..+..+.++|.+
T Consensus 3 ~~Ry~viG~yvg~aTvg~f~~ 23 (26)
T 2voy_D 3 FFRYMAIGGYVGAATVGAAAW 23 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHhhheeEE
Confidence 456778888888888777654
No 8
>2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A
Probab=17.25 E-value=1.7e+02 Score=23.02 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=15.3
Q ss_pred hhhhhcccc--cCChhHH--HHHHHHHHHHHHHHHHHHhcccCC
Q 043698 122 FLKKFADTE--RLNWGQW--AACIGIAAMSWPIGFLFKCIPVSG 161 (171)
Q Consensus 122 ~l~~~f~~~--~l~~~~w--~~~~~~~~~~~~~~e~~K~i~r~~ 161 (171)
.+..+||+. .++..+| ++.+.+++..++..-+.-+++|++
T Consensus 318 ~IaGiyGMNf~~mPel~~~~Gy~~~l~~m~~i~~~~~~~Fkrk~ 361 (363)
T 2iub_A 318 FIAGIYGMNFEYMPELRWKWGYPVVLAVMGVIAVIMVVYFKKKK 361 (363)
T ss_dssp HHTTSCC--------------CHHHHHHHHHHHHHHHTTTTSCC
T ss_pred HHHhhhcccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 456666652 3555444 444444444444444556666553
No 9
>3ukw_C Bimax1 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; HET: BTB; 2.10A {Mus musculus}
Probab=13.69 E-value=1.1e+02 Score=14.42 Aligned_cols=13 Identities=31% Similarity=0.348 Sum_probs=7.5
Q ss_pred CccccCCCCCCCC
Q 043698 15 TNDLMSKPPVGRS 27 (171)
Q Consensus 15 ~~~~M~r~PR~~~ 27 (171)
|-|.=.+|||.++
T Consensus 13 ewdedeepprkrk 25 (28)
T 3ukw_C 13 EWDEDEEPPRKRK 25 (28)
T ss_dssp CCCGGGSCCSSCC
T ss_pred ccccccCcchhhh
Confidence 4444457777654
No 10
>4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii}
Probab=13.35 E-value=1.9e+02 Score=22.32 Aligned_cols=8 Identities=0% Similarity=0.156 Sum_probs=4.4
Q ss_pred hhhhhccc
Q 043698 122 FLKKFADT 129 (171)
Q Consensus 122 ~l~~~f~~ 129 (171)
.+..+||+
T Consensus 294 ~IaGiyGM 301 (339)
T 4ev6_A 294 WITGIYGM 301 (339)
T ss_dssp HHHHHTTC
T ss_pred HHHhhccC
Confidence 34556655
Done!