Citrus Sinensis ID: 043701

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------
Protein Sequence
MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM
Secondary Structure (PSIPRED)
cccccccHHHHHHHHcccccccccccccccccEEEEEcccEEEEEEEEcccccccHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccEcHHHHHHHHccccHcccccccccccEEccEcccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MELWEFDFARIAKAtdnfssynklgegrfgpvYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM
Flexible Loop (DISEMBL)
MELWEFDFARIAkatdnfssynklgegrFGPVYKVILWHSveiksvkrlskgsrqgmeelknevtlifvsnyrlllhm
Low Complexity Region (SEG)
MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM
Disordered region (IsUnstruct)
**LWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVK************LKNEVTLIFVSNYRLLL**
Disordered Region (DISOPRED)
MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM
Disordered Region (DISEMBL)
MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM
Disordered Region (DISPRO)
MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	78	2.2.26 [Sep-21-2011]
Q9ZT07	833	G-type lectin S-receptor-	yes	no	0.974	0.091	0.571	2e-14
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.974	0.089	0.558	6e-14
Q9SXB5	820	G-type lectin S-receptor-	no	no	0.974	0.092	0.532	9e-13
Q9SXB4	820	G-type lectin S-receptor-	no	no	0.974	0.092	0.532	2e-12
Q9LDM5	666	Putative cysteine-rich re	no	no	0.794	0.093	0.571	3e-12
O81832	783	G-type lectin S-receptor-	no	no	0.987	0.098	0.487	1e-11
O65472	690	Putative cysteine-rich re	no	no	0.987	0.111	0.461	1e-11
Q9ZR08	852	G-type lectin S-receptor-	no	no	0.987	0.090	0.487	2e-11
Q9SXB8	842	G-type lectin S-receptor-	no	no	0.974	0.090	0.519	2e-11
Q9C5S8	659	Cysteine-rich receptor-li	no	no	0.935	0.110	0.5	3e-11

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 53/77 (68%), Gaps = 1/77 (1%)

Query: 2   ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
           EL  FD   I  AT+NFSS NKLG G FGPVYK +L + +EI +VKRLS+ S QGMEE K
Sbjct: 499 ELPLFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVLQNRMEI-AVKRLSRNSGQGMEEFK 557

Query: 62  NEVTLIFVSNYRLLLHM 78
           NEV LI    +R L+ +
Sbjct: 558 NEVKLISKLQHRNLVRI 574

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 1/77 (1%)

Query: 2   ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
           EL  F+ + IA AT+NF+  NKLG G FGPVYK +L + +EI +VKRLSK S QGMEE K
Sbjct: 507 ELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGMEI-AVKRLSKSSGQGMEEFK 565

Query: 62  NEVTLIFVSNYRLLLHM 78
           NEV LI    +R L+ +
Sbjct: 566 NEVKLISKLQHRNLVRI 582

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB5|Y1135_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11305 OS=Arabidopsis thaliana GN=At1g11305 PE=2 SV=1

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 1/77 (1%)

Query: 2   ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
           EL  F+F  +A ATDNFS  NKLG+G FGPVYK +L    EI +VKRLS+ S QG+EEL 
Sbjct: 493 ELPLFEFQVLATATDNFSLSNKLGQGGFGPVYKGMLLEGQEI-AVKRLSQASGQGLEELV 551

Query: 62  NEVTLIFVSNYRLLLHM 78
            EV +I    +R L+ +
Sbjct: 552 TEVVVISKLQHRNLVKL 568

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB4|Y1130_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300 OS=Arabidopsis thaliana GN=At1g11300 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 1/77 (1%)

Query: 2   ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
           EL  F+F  +A AT+NFS  NKLG+G FGPVYK  L    EI +VKRLS+ S QG+EEL 
Sbjct: 493 ELPLFEFQVLAAATNNFSLRNKLGQGGFGPVYKGKLQEGQEI-AVKRLSRASGQGLEELV 551

Query: 62  NEVTLIFVSNYRLLLHM 78
           NEV +I    +R L+ +
Sbjct: 552 NEVVVISKLQHRNLVKL 568

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LDM5|CRK31_ARATH Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=3 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/63 (57%), Positives = 44/63 (69%), Gaps = 1/63 (1%)

Query: 5   EFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEV 64
           +FDF  I  ATDNFS  NKLG+G FG VYK +L +  EI +VKRLS  S QG +E KNEV
Sbjct: 326 QFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEI-AVKRLSSNSGQGTQEFKNEV 384

Query: 65  TLI 67
            ++
Sbjct: 385 VIV 387

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 OS=Arabidopsis thaliana GN=At4g27290 PE=3 SV=4

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           +EL   D   +++AT  FS+ NKLG+G FGPVYK  L    E+ +VKRLS+ SRQG+EE 
Sbjct: 448 LELPFLDLDTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQEV-AVKRLSRTSRQGVEEF 506

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNE+ LI    +R L+ +
Sbjct: 507 KNEIKLIAKLQHRNLVKI 524

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O65472|CRK12_ARATH Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=3 SV=2

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           +   + DF  I  AT+NF+  NKLG+G FG VYK  L +  E+ +VKRLSK S QG +E 
Sbjct: 350 LHFQQLDFKTIEVATENFAKTNKLGQGGFGEVYKGTLVNGTEV-AVKRLSKTSEQGAQEF 408

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEV L+    +R L+ +
Sbjct: 409 KNEVVLVAKLQHRNLVKL 426

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9ZR08|Y4230_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 OS=Arabidopsis thaliana GN=At4g03230 PE=3 SV=3

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           +++  F+   I  AT NFS+ NKLG+G FGPVYK +     EI +VKRLS+ S QG+EE 
Sbjct: 515 IDVPSFELETILYATSNFSNANKLGQGGFGPVYKGMFPGDQEI-AVKRLSRCSGQGLEEF 573

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEV LI    +R L+ +
Sbjct: 574 KNEVVLIAKLQHRNLVRL 591

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB8|Y1133_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana GN=At1g11330 PE=1 SV=3

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/77 (51%), Positives = 52/77 (67%), Gaps = 1/77 (1%)

Query: 2   ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
           EL  F+F  +A +TD+FS  NKLG+G FGPVYK  L    EI +VKRLS+ S QG+EEL 
Sbjct: 508 ELPLFEFQVLATSTDSFSLRNKLGQGGFGPVYKGKLPEGQEI-AVKRLSRKSGQGLEELM 566

Query: 62  NEVTLIFVSNYRLLLHM 78
           NEV +I    +R L+ +
Sbjct: 567 NEVVVISKLQHRNLVKL 583

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9C5S8|CRK5_ARATH Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 1/74 (1%)

Query: 5   EFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEV 64
           +FDF  I  ATD FS  NKLG+G FG VYK  L + V++ +VKRLSK S QG +E KNEV
Sbjct: 327 QFDFKVIEAATDKFSMCNKLGQGGFGQVYKGTLPNGVQV-AVKRLSKTSGQGEKEFKNEV 385

Query: 65  TLIFVSNYRLLLHM 78
            ++    +R L+ +
Sbjct: 386 VVVAKLQHRNLVKL 399

Involved in multiple distinct defense responses. May function as a disease resistance (R) protein.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
224122966	783	predicted protein [Populus trichocarpa]	0.987	0.098	0.602	1e-14
255575970	2428	conserved hypothetical protein [Ricinus	0.987	0.031	0.576	1e-14
255575986	1597	ATP binding protein, putative [Ricinus c	0.987	0.048	0.589	6e-14
302143131	1901	unnamed protein product [Vitis vinifera]	0.987	0.040	0.576	7e-14
224115116	739	predicted protein [Populus trichocarpa]	0.987	0.104	0.576	1e-13
255575980	614	S-locus-specific glycoprotein S6 precurs	0.987	0.125	0.576	1e-13
357444317	673	Cysteine-rich receptor-like protein kina	0.987	0.114	0.538	3e-13
357444313	801	Cysteine-rich receptor-like protein kina	0.987	0.096	0.538	3e-13
224122978	831	predicted protein [Populus trichocarpa]	0.987	0.092	0.576	3e-13
302143165	657	unnamed protein product [Vitis vinifera]	0.987	0.117	0.576	3e-13

>gi|224122966|ref|XP_002330408.1| predicted protein [Populus trichocarpa] gi|222871793|gb|EEF08924.1| predicted protein [Populus trichocarpa]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/78 (60%), Positives = 53/78 (67%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           MEL  F  A I KATDNFSS NKLG+G FGPVYK  L    EI +VKRLSK SRQG+ E 
Sbjct: 449 MELPSFHLATIVKATDNFSSNNKLGQGGFGPVYKGTLIDGQEI-AVKRLSKSSRQGLTEF 507

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEV LI    +R L+ +
Sbjct: 508 KNEVILIAKLQHRNLVKL 525

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575970|ref|XP_002528881.1| conserved hypothetical protein [Ricinus communis] gi|223531680|gb|EEF33505.1| conserved hypothetical protein [Ricinus communis]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 1/78 (1%)

Query: 1    MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
            +EL  FDFA IA AT+NFSSYN LGEG FGPVYK +L    E+ +VKRLS+ SRQG++E 
Sbjct: 2119 LELPHFDFAIIANATNNFSSYNMLGEGGFGPVYKGLLKEGQEV-AVKRLSRDSRQGLDEF 2177

Query: 61   KNEVTLIFVSNYRLLLHM 78
            KNEV  I    +R L+ +
Sbjct: 2178 KNEVKYIAELQHRNLVKL 2195

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575986|ref|XP_002528889.1| ATP binding protein, putative [Ricinus communis] gi|223531688|gb|EEF33513.1| ATP binding protein, putative [Ricinus communis]

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           MEL  FDF  I KATDNFS+ NKLG+G FGPVYK IL    EI +VKRLSK S QG+ E 
Sbjct: 472 MELPIFDFTAIVKATDNFSNNNKLGQGGFGPVYKGILTDGQEI-AVKRLSKSSGQGLTEF 530

Query: 61  KNEVTLIFVSNYRLLLHM 78
           +NEV LI    +R L+ +
Sbjct: 531 ENEVILISKLQHRNLVKL 548

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143131|emb|CBI20426.3| unnamed protein product [Vitis vinifera]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 1/78 (1%)

Query: 1    MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
            +EL  FDF  IA+ATDNFS  NKLG+G FGPVYK +L    EI +VKRLSK SRQG++E 
Sbjct: 1566 LELPLFDFDTIAEATDNFSRSNKLGQGGFGPVYKGMLRGGQEI-AVKRLSKNSRQGLDEF 1624

Query: 61   KNEVTLIFVSNYRLLLHM 78
            KNEV  I    +R L+ +
Sbjct: 1625 KNEVLCIAKLQHRNLVKL 1642

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115116|ref|XP_002316944.1| predicted protein [Populus trichocarpa] gi|222860009|gb|EEE97556.1| predicted protein [Populus trichocarpa]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           MEL  +D   IA+AT+NFSS NKLGEG FGPV+K  L    EI +VKRLSK S QGM+E 
Sbjct: 437 MELPIYDLNTIARATNNFSSMNKLGEGGFGPVFKGTLVDGQEI-AVKRLSKSSGQGMDEF 495

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEV LI    +R L+ +
Sbjct: 496 KNEVVLIAKLQHRNLVKL 513

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575980|ref|XP_002528886.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223531685|gb|EEF33510.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           +EL  FDF  IA ATD FS YNKLGEG FGPVYK  L    EI +VKRLSK S QG++E 
Sbjct: 441 LELPIFDFLTIANATDMFSGYNKLGEGGFGPVYKGTLKDGREI-AVKRLSKDSTQGLDEF 499

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEV  I    +R L+ +
Sbjct: 500 KNEVIFIAKLQHRNLVKL 517

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444317|ref|XP_003592436.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481484|gb|AES62687.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           +E  +FDF  IA AT+NFS  NKLGEG FG VYK +L++  EI +VKRLS+ S QG+EE 
Sbjct: 327 VEFLQFDFDTIATATNNFSGDNKLGEGGFGEVYKGMLFNGQEI-AVKRLSRSSGQGIEEF 385

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEV L+    +R L+ +
Sbjct: 386 KNEVVLVAKLQHRNLVRI 403

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357444313|ref|XP_003592434.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|355481482|gb|AES62685.1| Cysteine-rich receptor-like protein kinase [Medicago truncatula]

 Score = 79.3 bits (194), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/78 (53%), Positives = 55/78 (70%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           +E  +FDF  IA AT+NFS  NKLGEG FG VYK +L++  EI +VKRLS+ S QG+EE 
Sbjct: 327 VEFLQFDFDTIATATNNFSGDNKLGEGGFGEVYKGMLFNGQEI-AVKRLSRSSGQGIEEF 385

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEV L+    +R L+ +
Sbjct: 386 KNEVVLVAKLQHRNLVRI 403

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224122978|ref|XP_002330411.1| predicted protein [Populus trichocarpa] gi|222871796|gb|EEF08927.1| predicted protein [Populus trichocarpa]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           MEL  FD + IA ATDNFSS NKLGEG FG VYK  L    E+ +VKRLSK S QG+ E 
Sbjct: 490 MELPTFDLSTIANATDNFSSRNKLGEGGFGSVYKGTLIEGQEV-AVKRLSKNSGQGLTEF 548

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEV LI    +R L+ +
Sbjct: 549 KNEVILIAKLQHRNLVKL 566

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143165|emb|CBI20460.3| unnamed protein product [Vitis vinifera]

 Score = 79.0 bits (193), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 54/78 (69%), Gaps = 1/78 (1%)

Query: 1   MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
           +EL  FD   I  ATDNFS+ NKLGEG FGPVYK +L    EI +VKRLSK SRQG++E 
Sbjct: 323 LELPLFDLDTILNATDNFSNDNKLGEGGFGPVYKGMLQDGKEI-AVKRLSKESRQGLDEF 381

Query: 61  KNEVTLIFVSNYRLLLHM 78
           KNEVT I    +R L+ +
Sbjct: 382 KNEVTHISKLQHRNLVKL 399

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	78
TAIR|locus:2123126	666	CRK31 "cysteine-rich RLK (RECE	0.935	0.109	0.5	9.3e-12
TAIR|locus:2131684	783	AT4G27290 [Arabidopsis thalian	0.961	0.095	0.5	4.1e-11
UNIPROTKB|O49974	848	KIK1 "Serine/threonine-protein	0.974	0.089	0.506	9.5e-11
TAIR|locus:2123056	656	CRK32 "cysteine-rich RLK (RECE	0.935	0.111	0.459	1.1e-10
TAIR|locus:2137144	646	CRK37 "cysteine-rich RLK (RECE	0.923	0.111	0.534	2.2e-10
TAIR|locus:2137184	659	CRK39 "cysteine-rich RLK (RECE	0.923	0.109	0.493	2.9e-10
TAIR|locus:2197704	831	AT1G61390 [Arabidopsis thalian	0.923	0.086	0.506	3.2e-10
TAIR|locus:2197729	805	SD1-29 "S-domain-1 29" [Arabid	0.923	0.089	0.506	3.9e-10
TAIR|locus:2200151	830	SD1-13 "S-domain-1 13" [Arabid	0.974	0.091	0.493	4e-10
TAIR|locus:2093397	850	CES101 "CALLUS EXPRESSION OF R	0.833	0.076	0.560	4.2e-10

TAIR|locus:2123126 CRK31 "cysteine-rich RLK (RECEPTOR-like protein kinase) 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 170 (64.9 bits), Expect = 9.3e-12, P = 9.3e-12
 Identities = 37/74 (50%), Positives = 49/74 (66%)

Query:     5 EFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEV 64
             +FDF  I  ATDNFS  NKLG+G FG VYK +L +  EI +VKRLS  S QG +E KNEV
Sbjct:   326 QFDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEI-AVKRLSSNSGQGTQEFKNEV 384

Query:    65 TLIFVSNYRLLLHM 78
              ++    ++ L+ +
Sbjct:   385 VIVAKLQHKNLVRL 398

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2131684 AT4G27290 [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 4.1e-11, P = 4.1e-11
 Identities = 38/76 (50%), Positives = 51/76 (67%)

Query:     1 MELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
             +EL   D   +++AT  FS+ NKLG+G FGPVYK  L    E+ +VKRLS+ SRQG+EE 
Sbjct:   448 LELPFLDLDTVSEATSGFSAGNKLGQGGFGPVYKGTLACGQEV-AVKRLSRTSRQGVEEF 506

Query:    61 KNEVTLIFVSNYRLLL 76
             KNE+ LI    +R L+
Sbjct:   507 KNEIKLIAKLQHRNLV 522

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0048765 "root hair cell differentiation" evidence=RCA

UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)]

 Score = 162 (62.1 bits), Expect = 9.5e-11, P = 9.5e-11
 Identities = 39/77 (50%), Positives = 47/77 (61%)

Query:     2 ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
             EL  +   RI  AT NFS  NKLGEG FGPVY   L    E+ +VKRL + S QG+EE K
Sbjct:   514 ELKVYSLDRIRTATSNFSDSNKLGEGGFGPVYMGTLPGGEEV-AVKRLCRNSGQGLEEFK 572

Query:    62 NEVTLIFVSNYRLLLHM 78
             NEV LI    +R L+ +
Sbjct:   573 NEVILIAKLQHRNLVRL 589

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2123056 CRK32 "cysteine-rich RLK (RECEPTOR-like protein kinase) 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 160 (61.4 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 34/74 (45%), Positives = 48/74 (64%)

Query:     5 EFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEV 64
             +FDF  +  ATD FS  NKLG+G FG VYK +L +  E+ +VKRLS  S QG +E KNEV
Sbjct:   308 QFDFMTLEAATDKFSRNNKLGKGGFGEVYKGMLPNETEV-AVKRLSSNSGQGTQEFKNEV 366

Query:    65 TLIFVSNYRLLLHM 78
              ++    ++ L+ +
Sbjct:   367 VIVAKLQHKNLVRL 380

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2137144 CRK37 "cysteine-rich RLK (RECEPTOR-like protein kinase) 37" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 39/73 (53%), Positives = 46/73 (63%)

Query:     6 FDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVT 65
             FD   I  AT+NFS  NKLG+G FG VYK IL    EI +VKRL KGS QG  E KNEV 
Sbjct:   333 FDLRMIVTATNNFSLENKLGQGGFGSVYKGILPSGQEI-AVKRLRKGSGQGGMEFKNEVL 391

Query:    66 LIFVSNYRLLLHM 78
             L+    +R L+ +
Sbjct:   392 LLTRLQHRNLVKL 404

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2137184 CRK39 "cysteine-rich RLK (RECEPTOR-like protein kinase) 39" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.9e-10, P = 2.9e-10
 Identities = 36/73 (49%), Positives = 47/73 (64%)

Query:     6 FDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVT 65
             FD   +  ATD FSS N LG+G FG VYK  L +  E+ +VKRL+KGS QG  E KNEV+
Sbjct:   341 FDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEV-AVKRLTKGSGQGDIEFKNEVS 399

Query:    66 LIFVSNYRLLLHM 78
             L+    +R L+ +
Sbjct:   400 LLTRLQHRNLVKL 412

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2197704 AT1G61390 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 37/73 (50%), Positives = 46/73 (63%)

Query:     6 FDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVT 65
             FD   I  AT+NFSS NKLG+G FGPVYK  L    EI +VKRLS  S QG +E  NE+ 
Sbjct:   508 FDMHTIRTATNNFSSSNKLGQGGFGPVYKGKLVDGKEI-AVKRLSSSSGQGTDEFMNEIR 566

Query:    66 LIFVSNYRLLLHM 78
             LI    ++ L+ +
Sbjct:   567 LISKLQHKNLVRL 579

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 3.9e-10, P = 3.9e-10
 Identities = 37/73 (50%), Positives = 45/73 (61%)

Query:     6 FDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVT 65
             F+   I  AT+NFS  NKLG+G FGPVYK  L    EI  VKRL+  S QG EE  NE+T
Sbjct:   476 FEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEI-GVKRLASSSGQGTEEFMNEIT 534

Query:    66 LIFVSNYRLLLHM 78
             LI    +R L+ +
Sbjct:   535 LISKLQHRNLVRL 547

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2200151 SD1-13 "S-domain-1 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 4.0e-10, P = 4.0e-10
 Identities = 38/77 (49%), Positives = 51/77 (66%)

Query:     2 ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
             EL  F+F  +A AT+NFS  NKLG+G FG VYK  L   ++I +VKRLS+ S QG+EE  
Sbjct:   496 ELPLFEFQVLAVATNNFSITNKLGQGGFGAVYKGRLQEGLDI-AVKRLSRTSGQGVEEFV 554

Query:    62 NEVTLIFVSNYRLLLHM 78
             NEV +I    +R L+ +
Sbjct:   555 NEVVVISKLQHRNLVRL 571

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

GO:0009637 "response to blue light" evidence=RCA

GO:0010155 "regulation of proton transport" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

TAIR|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 4.2e-10, P = 4.2e-10
 Identities = 37/66 (56%), Positives = 42/66 (63%)

Query:     2 ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
             EL  F F  +A ATD FS  NKLGEG FGPVYK  L    E+ ++KRLS  S QG+ E K
Sbjct:   511 ELQIFSFESVAFATDYFSDANKLGEGGFGPVYKGRLIDGEEV-AIKRLSLASGQGLVEFK 569

Query:    62 NEVTLI 67
             NE  LI
Sbjct:   570 NEAMLI 575

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	78
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	0.003

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 33.8 bits (78), Expect = 0.003
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 17 NFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKGSRQGMEELKNEVTL 66
          N+   + +G G FG VYK +   +   V IK +  L K   + ++ +  E+ L
Sbjct: 1  NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQIS-LEKIKEEALKSIMQEIDL 52

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	78
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.7
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.35
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.29
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.26
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.22
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.2
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.15
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.12
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.11
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.09
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.08
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.07
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.04
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	98.99
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	98.99
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	98.98
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	98.98
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	98.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.97
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.95
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	98.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	98.95
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.95
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	98.94
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	98.94
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	98.94
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.94
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	98.94
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	98.94
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	98.93
PTZ00263	329	protein kinase A catalytic subunit; Provisional	98.92
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.91
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	98.9
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.89
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.89
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.88
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.88
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	98.88
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.87
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.87
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	98.87
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	98.87
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	98.86
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.86
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.86
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.86
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	98.86
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	98.86
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.85
PLN00034	353	mitogen-activated protein kinase kinase; Provision	98.85
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	98.85
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	98.85
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.85
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.84
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	98.84
PTZ00036	440	glycogen synthase kinase; Provisional	98.84
PRK09188	365	serine/threonine protein kinase; Provisional	98.84
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.83
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	98.83
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	98.83
PHA03212	391	serine/threonine kinase US3; Provisional	98.82
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.82
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	98.82
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.82
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.82
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.81
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.81
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	98.81
KOG0586	596	consensus Serine/threonine protein kinase [General	98.81
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	98.81
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.81
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.79
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.79
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.79
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.79
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	98.78
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.78
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	98.78
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.78
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.78
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	98.78
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.78
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	98.78
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.77
KOG0198	313	consensus MEKK and related serine/threonine protei	98.77
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.77
KOG1989	738	consensus ARK protein kinase family [Signal transd	98.77
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	98.77
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	98.77
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.77
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.77
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.77
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.77
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.77
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	98.76
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	98.76
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.76
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	98.76
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	98.76
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.76
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	98.76
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.75
KOG0605	550	consensus NDR and related serine/threonine kinases	98.75
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.75
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.75
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.75
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.75
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.74
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	98.74
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	98.74
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.74
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.74
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	98.73
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.73
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.72
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	98.72
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.71
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.71
KOG0582	516	consensus Ste20-like serine/threonine protein kina	98.71
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.71
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	98.71
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	98.7
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	98.7
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.7
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.7
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	98.7
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	98.7
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	98.7
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.69
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	98.69
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.69
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.69
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.69
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.69
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.69
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	98.69
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	98.69
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	98.69
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.68
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	98.68
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.68
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.68
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.68
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.68
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.68
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.68
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.67
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.67
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	98.67
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	98.67
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.67
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	98.67
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.66
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	98.66
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.66
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.66
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	98.66
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.65
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.65
PTZ00283	496	serine/threonine protein kinase; Provisional	98.65
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.65
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.65
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.65
PTZ00267	478	NIMA-related protein kinase; Provisional	98.65
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.65
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	98.64
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.64
PLN00009	294	cyclin-dependent kinase A; Provisional	98.64
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.64
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.64
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	98.64
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	98.64
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.63
PHA02988	283	hypothetical protein; Provisional	98.63
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.63
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.63
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.63
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.63
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.63
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.63
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.63
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.62
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.62
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.62
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	98.62
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.62
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	98.62
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.62
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.62
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	98.61
PHA03211	461	serine/threonine kinase US3; Provisional	98.61
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.61
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.61
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.61
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.6
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.6
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.6
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.6
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.6
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.6
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.6
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	98.6
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.6
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	98.6
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.6
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.59
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.59
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	98.59
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.59
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.59
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.59
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	98.58
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.58
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	98.58
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.58
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.58
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.57
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.57
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.57
KOG0581	364	consensus Mitogen-activated protein kinase kinase	98.57
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.57
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.57
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.57
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.56
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.56
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.56
PHA03209	357	serine/threonine kinase US3; Provisional	98.56
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.56
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.56
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.56
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.56
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	98.56
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.56
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.55
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	98.55
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	98.55
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.55
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	98.55
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	98.55
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.54
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.54
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.54
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.54
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.54
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	98.54
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.53
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	98.53
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	98.53
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.53
KOG0694	694	consensus Serine/threonine protein kinase [Signal	98.53
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.53
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	98.53
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	98.52
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.52
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.51
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	98.51
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.51
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.51
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.51
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	98.51
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	98.5
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.5
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	98.5
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	98.5
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.49
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	98.49
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.48
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.47
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.47
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	98.47
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.47
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	98.47
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.46
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	98.46
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	98.46
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	98.45
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	98.45
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	98.44
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	98.44
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.44
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.44
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.44
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	98.43
PRK10345	210	hypothetical protein; Provisional	98.43
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	98.42
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.42
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	98.42
PTZ00284	467	protein kinase; Provisional	98.42
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.42
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	98.42
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	98.41
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	98.41
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.41
KOG0578	550	consensus p21-activated serine/threonine protein k	98.41
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.41
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.41
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	98.41
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.4
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	98.39
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	98.39
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.39
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.39
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.38
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.37
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	98.37
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	98.37
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	98.37
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.36
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.36
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	98.36
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	98.36
KOG0584	632	consensus Serine/threonine protein kinase [General	98.36
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	98.35
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.35
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	98.34
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	98.34
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	98.34
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.34
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.34
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	98.33
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	98.33
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	98.33
KOG0589	426	consensus Serine/threonine protein kinase [General	98.33
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.33
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	98.33
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	98.33
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	98.33
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.32
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	98.31
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.3
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	98.29
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.29
PHA03207	392	serine/threonine kinase US3; Provisional	98.28
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.26
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	98.26
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.25
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.25
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	98.25
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	98.25
PHA03210	501	serine/threonine kinase US3; Provisional	98.23
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	98.22
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.21
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	98.2
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.2
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.2
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.19
KOG3653	534	consensus Transforming growth factor beta/activin	98.19
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	98.19
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	98.18
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	98.16
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.15
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.13
KOG0610	459	consensus Putative serine/threonine protein kinase	98.12
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.11
KOG1152	772	consensus Signal transduction serine/threonine kin	98.05
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	98.03
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.02
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.01
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	97.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	97.94
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.94
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	97.93
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	97.9
KOG0690	516	consensus Serine/threonine protein kinase [Signal	97.9
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	97.88
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	97.84
KOG0607	463	consensus MAP kinase-interacting kinase and relate	97.83
PHA02882	294	putative serine/threonine kinase; Provisional	97.81
KOG1290	590	consensus Serine/threonine protein kinase [Signal	97.77
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.73
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	97.72
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.71
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.68
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	97.63
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	97.62
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	97.59
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	97.54
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	97.54
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	97.53
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.52
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.5
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	97.49
KOG0596	677	consensus Dual specificity; serine/threonine and t	97.39
KOG1167	418	consensus Serine/threonine protein kinase of the C	97.37
PRK09605	535	bifunctional UGMP family protein/serine/threonine	97.36
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	97.34
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.21
PRK14879	211	serine/threonine protein kinase; Provisional	97.2
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.19
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	97.18
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.13
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	97.1
smart00090	237	RIO RIO-like kinase.	96.92
KOG4721	904	consensus Serine/threonine protein kinase, contain	96.88
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	96.85
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	96.69
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	96.64
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	96.61
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	96.55
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	96.54
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.46
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	96.21
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	96.13
KOG1027	903	consensus Serine/threonine protein kinase and endo	95.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	95.83
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	95.51
KOG0696	683	consensus Serine/threonine protein kinase [Signal	95.49
KOG0695	593	consensus Serine/threonine protein kinase [Signal	95.45
COG0515	384	SPS1 Serine/threonine protein kinase [General func	95.33
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	95.32
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	95.29
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	95.18
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	94.89
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	94.67
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	94.32
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	94.18
PRK12274	218	serine/threonine protein kinase; Provisional	94.04
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	93.56
COG0661	517	AarF Predicted unusual protein kinase [General fun	92.71
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	92.34
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	91.33
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	91.06
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	90.15
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	89.22
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	88.95
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	85.9
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	84.76
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	81.6
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	80.48

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.70  E-value=1.9e-16  Score=85.51  Aligned_cols=75  Identities=41%  Similarity=0.597  Sum_probs=63.6

Q ss_pred             ceeeehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701            3 LWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...|++.++..+|++|...+.||+|+||.||+|...++..+ |+|.+.........+|..|+.++.+++|+|+|+|
T Consensus        62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~v-AVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~L  136 (361)
T KOG1187|consen   62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVV-AVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKL  136 (361)
T ss_pred             cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEE-EEEEecCCCCcchhHHHHHHHHHhcCCCcCcccE
Confidence            56789999999999999999999999999999999877555 9998754332214559999999999999999975

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.35  E-value=2.5e-12  Score=69.78  Aligned_cols=65  Identities=18%  Similarity=0.259  Sum_probs=53.7

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|.....||.|.|+.||+|+++..+..+|+|++...  ..+..+-...|+.+++.++|+|||.|
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l   74 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRL   74 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeE
Confidence            456788888899999999999999866677799999654  44445667899999999999999975

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.29  E-value=3.7e-12  Score=70.76  Aligned_cols=65  Identities=20%  Similarity=0.314  Sum_probs=52.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|+..+.||+|.||.||+++....+.+||+|.++...  ..-..-..+|+.++++++|+||++|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL  181 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKL  181 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccce
Confidence            3456777889999999999999988777777999986443  3334557899999999999999975

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.26  E-value=8.2e-12  Score=70.76  Aligned_cols=62  Identities=23%  Similarity=0.465  Sum_probs=52.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.||+|+||.||+|+.+....++|+|.+...  ..++...+.+|+++++.+.|+||+.
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~   65 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVE   65 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhh
Confidence            4567778899999999999998877778899998543  4445677999999999999999985

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.22  E-value=4.4e-11  Score=67.49  Aligned_cols=63  Identities=19%  Similarity=0.254  Sum_probs=53.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|...+++|+|+|+.+|.+.....+..+|+|.++..   .....+...+|+++.+.|.|+|||++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f   83 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQF   83 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEee
Confidence            3588889999999999999998666667799998653   34456789999999999999999974

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.20  E-value=3.1e-11  Score=64.15  Aligned_cols=62  Identities=18%  Similarity=0.275  Sum_probs=49.7

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|+....+|+|++|.||+++.++.+.++|+|.+-..  +..-.+--.+|++.++.+.|+|+|.|
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnL   66 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNL   66 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHH
Confidence            355567899999999999999988888899998432  22334557899999999999999864

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.15  E-value=1.1e-11  Score=63.72  Aligned_cols=65  Identities=28%  Similarity=0.334  Sum_probs=53.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|+....+|.|.||.||.++.+.+..++|+|.+...   .......+.+|+++...|+||||.++
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrl   87 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRL   87 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhh
Confidence            447899999999999999999999888878899998432   23334568899999999999999864

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.12  E-value=1.3e-10  Score=64.85  Aligned_cols=68  Identities=24%  Similarity=0.262  Sum_probs=51.6

Q ss_pred             HHHhhcCcccceeeeecCCccEEEEEEcCC----cEEEEEEEccC---CccccHHHHHHHHHHHHHcCCCccccC
Q 043701           11 IAKATDNFSSYNKLGEGRFGPVYKVILWHS----VEIKSVKRLSK---GSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        11 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~----~~~~~~k~~~~---~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++...++....+.+|+|.||.||.|.+...    ...||+|....   ........|.+|+++|+.++|+|||++
T Consensus       152 Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~  226 (474)
T KOG0194|consen  152 WELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF  226 (474)
T ss_pred             cEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            344456666779999999999999987532    12158887753   234567789999999999999999974

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.11  E-value=2.4e-11  Score=64.03  Aligned_cols=63  Identities=21%  Similarity=0.368  Sum_probs=50.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEcc--CCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLS--KGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+|...++||.|+||.||+......+..+|.|.++  ..+.+..+.+..|+.+++.|.|||||+
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVq   82 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQ   82 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHH
Confidence            346788899999999999998776545555888875  234556678999999999999999986

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.09  E-value=1.3e-10  Score=62.42  Aligned_cols=66  Identities=20%  Similarity=0.367  Sum_probs=52.2

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcccc--HHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQG--MEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|+..+.|++|.||.||++.+.....+||+|.++......  .-...+|+.++.+.+|+|||.+
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~v  140 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEV  140 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeee
Confidence            34467888899999999999999998877888999986442221  2235789999999999999863

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.08  E-value=5.9e-10  Score=60.01  Aligned_cols=58  Identities=19%  Similarity=0.374  Sum_probs=45.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+...+++|.|+||.||.+........+|+|.......    --..|+.+|+.++|||||+|
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L   82 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRL   82 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeE
Confidence            46678999999999999998876655559998744321    22368889999999999975

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.07  E-value=4.7e-10  Score=61.12  Aligned_cols=60  Identities=22%  Similarity=0.291  Sum_probs=46.0

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc--cHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ--GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.....+|.|.||.||.+.++....+ |+|.+......  ..+.|.+|+.++.+++|||||++
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~g~~~v-avK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f  104 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWRGTDVV-AVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQF  104 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeCCceeE-EEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            44456699999999999988644334 99988543222  25689999999999999999974

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.04  E-value=1.7e-09  Score=56.28  Aligned_cols=67  Identities=18%  Similarity=0.222  Sum_probs=53.0

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +..++++.....+|+|.||.||++........+++|.+........+.+.+|+..+..++|+|++++
T Consensus         4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   70 (268)
T cd06624           4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQY   70 (268)
T ss_pred             ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeee
Confidence            3456677777899999999999998776555558988765544456678899999999999999863

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.00  E-value=1.2e-09  Score=61.03  Aligned_cols=65  Identities=14%  Similarity=0.244  Sum_probs=52.4

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--------------ccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--------------QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------------~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|.....||+|.||.|-.++......+||+|.+.....              ...+...+|+.+|++++|+|+|+|
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            34778999999999999999998877777889999843210              113578899999999999999985

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.00  E-value=3.6e-10  Score=62.83  Aligned_cols=61  Identities=23%  Similarity=0.361  Sum_probs=49.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+...+.||.|.||.|+.|.+.....+ ++|.+.... ...+.|.+|+.+|++|+|+|||++
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~v-avk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l  266 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNGSTKV-AVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKL  266 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcCCCcc-cceEEeccc-cChhHHHHHHHHHHhCcccCeEEE
Confidence            3455668899999999999998766566 888885543 235779999999999999999975

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.00  E-value=1e-09  Score=62.77  Aligned_cols=64  Identities=17%  Similarity=0.299  Sum_probs=51.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +...+...+.||+|.||.|..+.......+ |+|.++..... ...+|..|+++|.+++||||+.|
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkV-AVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveL  600 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKV-AVKILRPDATKNARNDFLKEIKILSRLKHPNIVEL  600 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEE-EEeecCcccchhHHHHHHHHHHHHhccCCCCeeEE
Confidence            344556678999999999999887655555 99999765444 34789999999999999999874

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=98.99  E-value=4.2e-10  Score=65.80  Aligned_cols=61  Identities=16%  Similarity=0.227  Sum_probs=49.7

Q ss_pred             cccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.++||.|.||.||.|+++-   ....+|+|.++.. ..+...+|+.|+.+|+..+||||++|
T Consensus       631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrL  695 (996)
T KOG0196|consen  631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRL  695 (996)
T ss_pred             eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEE
Confidence            4668999999999999998753   2244699998755 45566789999999999999999875

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=98.99  E-value=1.3e-09  Score=65.30  Aligned_cols=63  Identities=24%  Similarity=0.296  Sum_probs=50.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcC--C---cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH--S---VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~--~---~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+......||.|.||.||.|...+  +   ...+++|.+... +.....+|.+|..+|++++|+|||++
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~l  760 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSL  760 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeE
Confidence            455667899999999999998753  2   233589988554 55567889999999999999999975

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.98  E-value=1.1e-10  Score=67.76  Aligned_cols=66  Identities=20%  Similarity=0.342  Sum_probs=51.9

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCcc-ccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGSR-QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....+......+|+|.||.||.+....     ....||+|.++.... +..++|.+|++++..++|+|||+|
T Consensus       483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrL  554 (774)
T KOG1026|consen  483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRL  554 (774)
T ss_pred             echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEE
Confidence            344566677889999999999987542     235569999865443 367889999999999999999975

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=98.98  E-value=1.5e-09  Score=56.91  Aligned_cols=62  Identities=21%  Similarity=0.329  Sum_probs=48.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc--cHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ--GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|...+.+|+|.||.||++++...+..+|+|.+......  -.....+|+..++.++|+||+.|
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~L   66 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIEL   66 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhh
Confidence            345567899999999999998876666699998654322  23457899999999999999864

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=98.97  E-value=6.2e-10  Score=63.39  Aligned_cols=65  Identities=22%  Similarity=0.358  Sum_probs=51.5

Q ss_pred             hhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccc
Q 043701            9 ARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLL   76 (78)
Q Consensus         9 ~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv   76 (78)
                      +++...-+.+.....||+|+||+||+|.+.  +.+ |+|.+...  +....+.|..|+..+++-+|.||+
T Consensus       385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdV-AVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIl  451 (678)
T KOG0193|consen  385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDV-AVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENIL  451 (678)
T ss_pred             cccccCHHHhhccceeccccccceeecccc--cce-EEEEEecCCCCHHHHHHHHHHHHHHhhcchhhhe
Confidence            445555566777889999999999999874  345 89988543  344678899999999999999996

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.97  E-value=3.4e-10  Score=65.17  Aligned_cols=61  Identities=23%  Similarity=0.326  Sum_probs=50.1

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccC-CccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK-GSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +...+.+|+|+||.||.|+.+..+..+|+|..+. ......+.+..|+++++++.|+|||++
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~   76 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKL   76 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhh
Confidence            4556889999999999999776666669998854 344457889999999999999999974

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.97  E-value=5.2e-09  Score=56.97  Aligned_cols=62  Identities=15%  Similarity=0.190  Sum_probs=48.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|+..+.||+|+||.||.+.....+..+++|.+...  .....+.+.+|+.++..++|+|++++
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   64 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSA   64 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCH
Confidence            467789999999999999988655555599987432  22234568889999999999999863

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.95  E-value=1.5e-09  Score=58.46  Aligned_cols=64  Identities=22%  Similarity=0.394  Sum_probs=53.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|+..++||+|+||.|+..+..+...+||+|.++..   ..........|..++..++||.||+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l   90 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKL   90 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeee
Confidence            36789999999999999999998888888899998643   23345667788889999999999875

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=98.95  E-value=5.7e-09  Score=55.02  Aligned_cols=63  Identities=17%  Similarity=0.247  Sum_probs=49.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||.|.||.||.+........+++|.+.... ......+.+|+.++..++|+|++++
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   68 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTL   68 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeE
Confidence            45788899999999999999887655666999875322 2234467789999999999999863

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=3.7e-09  Score=55.82  Aligned_cols=62  Identities=16%  Similarity=0.215  Sum_probs=48.4

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|...+.||+|+||.||.+.....+..+++|.+...   .....+.+.+|+.++..+.|+||+++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   66 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRL   66 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhh
Confidence            577789999999999999988755556699987432   12234567889999999999999863

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.95  E-value=4.9e-10  Score=67.67  Aligned_cols=65  Identities=23%  Similarity=0.272  Sum_probs=51.1

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ....+|+....+|+|+||.||+.+-.-.+..||+|.++.. ....-....+|+.++.+|+|||+|+
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVR  541 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVR  541 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceee
Confidence            3456788889999999999999987744555699998643 2223355778999999999999986

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=98.94  E-value=7.6e-09  Score=54.86  Aligned_cols=64  Identities=19%  Similarity=0.209  Sum_probs=49.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||.|.||.||.+........+++|.+.... ......+.+|+.++..+.|+|++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   68 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLL   68 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeE
Confidence            357888899999999999999987555555999885432 2223457789999999999999863

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=98.94  E-value=5.3e-09  Score=57.17  Aligned_cols=62  Identities=21%  Similarity=0.335  Sum_probs=49.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|.....||+|+||.||++........+|+|.+...   .......+..|+.++..++|+|++++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l   66 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKL   66 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeee
Confidence            577789999999999999988766666699988542   22234568889999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=98.94  E-value=3.2e-09  Score=58.41  Aligned_cols=63  Identities=17%  Similarity=0.252  Sum_probs=48.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc-------ccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-------QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.+|+|.||.|-.+..+..+..+|+|.+.....       .......+|+++|++++|||||++
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~  241 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRI  241 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEE
Confidence            446778999999999999998876666669999853311       122346799999999999999974

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.94  E-value=4.3e-09  Score=57.04  Aligned_cols=63  Identities=22%  Similarity=0.403  Sum_probs=49.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||.|+||.||.+.....+..+|+|.+...   .......+..|+.++..++|+|++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~   66 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKL   66 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcce
Confidence            3678889999999999999998765556699988532   12234557789999999999999863

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.94  E-value=1e-09  Score=63.88  Aligned_cols=63  Identities=24%  Similarity=0.300  Sum_probs=50.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcC--C-cEEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH--S-VEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~--~-~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.+...+.||+|.||.|+.|.+..  + ...||+|+++..... ...+|.+|+.+|.+|.|+|+++|
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRL  176 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRL  176 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEE
Confidence            345667889999999999998752  2 234699999765433 67899999999999999999875

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=98.94  E-value=8.7e-09  Score=55.21  Aligned_cols=61  Identities=16%  Similarity=0.285  Sum_probs=47.4

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.||+|.||.||.+.....+..+++|.+...  .......+.+|+.++..++|+|++++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~   64 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEI   64 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeee
Confidence            56678999999999999998765556699987532  22234568889999999999999863

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=98.93  E-value=1e-08  Score=53.82  Aligned_cols=62  Identities=19%  Similarity=0.326  Sum_probs=49.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|.....+|+|.|+.||.+........+++|.+...  .....+.+.+|+.++..+.|+|++++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   65 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVEL   65 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccch
Confidence            577889999999999999998766666699987532  22234567889999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=98.92  E-value=5.9e-09  Score=56.00  Aligned_cols=63  Identities=21%  Similarity=0.306  Sum_probs=49.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||.|+||.||.+........+++|.+...   .....+.+..|+.++..+.|+|++++
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   83 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNM   83 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcE
Confidence            6688889999999999999998765556699987432   22234568889999999999999863

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.91  E-value=1.8e-08  Score=54.42  Aligned_cols=70  Identities=17%  Similarity=0.215  Sum_probs=53.6

Q ss_pred             hhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701            9 ARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus         9 ~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++....++|.....||+|.||.+|.+.....+..+++|.+...  .....+.+.+|+.++..++|+|++++
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~   81 (345)
T cd07877          10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL   81 (345)
T ss_pred             HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccce
Confidence            34455778899999999999999999987655556699987532  22234567789999999999999863

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=98.90  E-value=1.5e-08  Score=52.76  Aligned_cols=64  Identities=17%  Similarity=0.340  Sum_probs=49.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|.....+|+|.|+.||.+........+++|.+..........+.+|+..+..++|+|++++
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~   71 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAY   71 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeee
Confidence            3568888999999999999998865555668998754433344567788999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.89  E-value=1.4e-08  Score=55.03  Aligned_cols=66  Identities=17%  Similarity=0.193  Sum_probs=51.7

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|...+.||+|+||.||.+.....+..+++|.+...  .......+.+|+.++..++|+|++++
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   85 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISL   85 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeee
Confidence            3457899999999999999999988765556699987432  22334567889999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.89  E-value=3.7e-09  Score=60.26  Aligned_cols=58  Identities=24%  Similarity=0.297  Sum_probs=47.9

Q ss_pred             ceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           21 YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        21 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++++|.|.||.||-|..+..++-+|+|.+...  ..+....+.+|++++..++||.||.|
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~l  628 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNL  628 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEE
Confidence            58899999999999998866666699999655  33445678899999999999999864

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.88  E-value=4.3e-09  Score=57.83  Aligned_cols=66  Identities=18%  Similarity=0.290  Sum_probs=52.6

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc---cHHHHHHHHHHHHHcC-CCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ---GMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      .....|.....+|.|.||.||.+.....+..+|+|.+......   ....+.+|+.+|..+. |+|++.+
T Consensus        32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l  101 (382)
T KOG0032|consen   32 DIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQL  101 (382)
T ss_pred             cccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEE
Confidence            3456688889999999999999998875555699998544222   3467899999999998 9999864

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.88  E-value=8e-09  Score=54.46  Aligned_cols=66  Identities=20%  Similarity=0.385  Sum_probs=52.9

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|.....+|.|.+|.||.+........+++|.+........+.+..++..+..+.|+|++++
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   74 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKL   74 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeee
Confidence            445668888999999999999998876555668988865555556778889999999999999863

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=98.88  E-value=1.4e-08  Score=54.05  Aligned_cols=63  Identities=17%  Similarity=0.232  Sum_probs=48.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.+|+|+||.||.+........+++|.+.... ......+.+|+.++..++|+|++++
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   69 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL   69 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceE
Confidence            45788899999999999999887655566999875332 2233457789999999999999863

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.87  E-value=1.5e-08  Score=54.65  Aligned_cols=66  Identities=17%  Similarity=0.230  Sum_probs=50.8

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|.....||.|+||.||.+........+|+|.+...  .......+.+|+.++..+.|+|++++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   79 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGL   79 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhh
Confidence            3456788899999999999999987655555699987542  22234557789999999999999863

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.87  E-value=1.2e-08  Score=55.82  Aligned_cols=62  Identities=21%  Similarity=0.327  Sum_probs=48.9

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|...+.||+|.||.||.+........+|+|.+....   ......+..|+.++..+.|+||+++
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~   66 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRL   66 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeE
Confidence            4777899999999999999887666666999885321   2234567889999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=98.87  E-value=1.7e-08  Score=54.27  Aligned_cols=64  Identities=22%  Similarity=0.215  Sum_probs=50.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|+....||+|+||.||.+.....+..+++|.+... .......+.+|+.++..++|+|++++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   68 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF   68 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeE
Confidence            35788889999999999999988766666688887543 22234568899999999999999863

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=98.87  E-value=1.2e-08  Score=54.76  Aligned_cols=62  Identities=19%  Similarity=0.389  Sum_probs=48.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|.....||+|.||.||.+........+++|.+...   .......+..|+.++..+.|+|++++
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~   66 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKL   66 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccE
Confidence            577889999999999999998765556699988532   12234567889999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.86  E-value=4.8e-09  Score=52.75  Aligned_cols=61  Identities=21%  Similarity=0.359  Sum_probs=48.4

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |..-+.||+|.+|+|++++-+....++|+|..+..  ...-...-.+|+.+++.+.|.|||++
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl   66 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL   66 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeeh
Confidence            33446799999999999998887778899987432  33344567899999999999999975

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.86  E-value=1.5e-08  Score=53.21  Aligned_cols=73  Identities=19%  Similarity=0.294  Sum_probs=55.7

Q ss_pred             eeehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701            5 EFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .+.++.+..+.++|+....||+|.++.||++........+++|.+.... .....+..|+.++..+ .|+|++++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~   80 (286)
T cd06638           7 TIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKF   80 (286)
T ss_pred             eEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeee
Confidence            3556677788899999999999999999999886555555888774422 2234577788888888 69999863

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.86  E-value=1.2e-08  Score=55.61  Aligned_cols=62  Identities=23%  Similarity=0.357  Sum_probs=48.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|...+.||.|.||.||.+........+|+|.+...   .....+.+..|+.++..+.|+|++++
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~   66 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSL   66 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceE
Confidence            577789999999999999988765566699987432   12234567789999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.86  E-value=1.5e-08  Score=55.24  Aligned_cols=62  Identities=21%  Similarity=0.332  Sum_probs=48.7

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|.....||+|.||.||.+........+|+|.+....   ......+..|+.++..+.|+|++++
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~   66 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKL   66 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceE
Confidence            5778899999999999999887666666999885321   2234567789999999999999863

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=98.86  E-value=1.6e-08  Score=53.97  Aligned_cols=63  Identities=24%  Similarity=0.367  Sum_probs=47.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcE----EEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVE----IKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|...+.||+|+||.||++.......    .+++|.+... .....+.+..|+.++..+.|+|++++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~   74 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL   74 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            458888999999999999998643221    2488887543 23345678899999999999999863

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=98.86  E-value=3.7e-09  Score=56.79  Aligned_cols=66  Identities=23%  Similarity=0.331  Sum_probs=48.6

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .+.++|...+.||.|+||.||.+...     .....+|+|.+... .......+..|+.++..+ +|+||+++
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   76 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNL   76 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeE
Confidence            34567888899999999999998642     12234589987543 223345688999999999 89999863

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.85  E-value=5.6e-09  Score=54.66  Aligned_cols=65  Identities=20%  Similarity=0.325  Sum_probs=51.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|.....+|.|.++.||.+........+++|.+........+.+..|+.++..++|+|++++
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   67 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGL   67 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEE
Confidence            34567888889999999999998865555558998765444455678899999999999999863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=98.85  E-value=1e-08  Score=55.52  Aligned_cols=63  Identities=19%  Similarity=0.267  Sum_probs=48.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||.|.||.||.+........+++|.+... .......+.+|+.++..++|+||+++
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  137 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKC  137 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCccee
Confidence            3456678899999999999988655555599987432 22234568899999999999999863

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=98.85  E-value=9.4e-09  Score=56.18  Aligned_cols=65  Identities=22%  Similarity=0.244  Sum_probs=48.4

Q ss_pred             hhcCcccceeeeecCCccEEEEEE-----cCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVIL-----WHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~-----~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+..     ......+|+|.+... .....+.+.+|+.++..+ .|+||+++
T Consensus        33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l  104 (375)
T cd05104          33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNL  104 (375)
T ss_pred             chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeee
Confidence            345788889999999999998863     123345599988543 233446688999999999 89999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=98.85  E-value=3.3e-09  Score=61.57  Aligned_cols=68  Identities=21%  Similarity=0.309  Sum_probs=51.7

Q ss_pred             hHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           10 RIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        10 ~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +++--..++.-.+.+|.|.+|.||.|.+......+|+|.+.... ....+|+.|+++|+.+.|+|+|+|
T Consensus       261 kWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqL  328 (1157)
T KOG4278|consen  261 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQL  328 (1157)
T ss_pred             hhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHH
Confidence            33333344555688999999999999887544444999885433 347889999999999999999985

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.85  E-value=2.4e-08  Score=53.92  Aligned_cols=63  Identities=16%  Similarity=0.203  Sum_probs=50.7

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...|...+.||.|+++.||.+.....+..+++|.+........+.+.+|+.++..++|+|+++
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~   66 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVK   66 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchh
Confidence            356888899999999999999887655555898875544444567888999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.84  E-value=2.8e-08  Score=53.79  Aligned_cols=66  Identities=15%  Similarity=0.202  Sum_probs=51.2

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|...+.||+|+||.||.+........+++|.+...  .......+.+|+.++..++|+|++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   81 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL   81 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhce
Confidence            3557899999999999999999987655555699987532  22334567789999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=98.84  E-value=2.6e-08  Score=52.29  Aligned_cols=61  Identities=18%  Similarity=0.302  Sum_probs=47.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|+..+.+|+|.++.||.+........+++|.+... .......+..|+.++..++|+|+++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   63 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIG   63 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeee
Confidence            566778999999999999987655556699987432 2233456888999999999999986

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.84  E-value=1.9e-08  Score=56.10  Aligned_cols=60  Identities=20%  Similarity=0.326  Sum_probs=46.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...|...+.||+|+||.||.+........+|+|.+...    .....+|+.++..++|+|++++
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l  124 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFL  124 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcce
Confidence            35688899999999999999988655555599977432    1224468899999999999863

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.84  E-value=3.1e-08  Score=54.29  Aligned_cols=66  Identities=11%  Similarity=0.019  Sum_probs=49.7

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcC-CcEEEEEEEccCC-----ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWH-SVEIKSVKRLSKG-----SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ....++|.....||+|.||.||.+.... ....+|+|.+...     .......+.+|+.++..+.|+|+++
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~   85 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVP   85 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCc
Confidence            4456779999999999999999998753 4445588876422     1122456889999999999999873

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.83  E-value=2.2e-08  Score=53.96  Aligned_cols=64  Identities=22%  Similarity=0.253  Sum_probs=49.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|+....+|.|.||.||.+........+++|.+... .......+..|+.++..++|+||+++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   68 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF   68 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccce
Confidence            35788889999999999999988755555588877543 22234568899999999999999863

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=98.83  E-value=2.8e-08  Score=52.37  Aligned_cols=61  Identities=26%  Similarity=0.395  Sum_probs=46.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|+..+.||+|+||.||.+........+|+|.+.....   .....+.+|+.++..++|+|+++
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   64 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS   64 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEee
Confidence            36677899999999999998765555569998754221   12345678999999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=98.83  E-value=2.8e-08  Score=52.66  Aligned_cols=63  Identities=19%  Similarity=0.250  Sum_probs=48.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|.....||.|++|.||.+........+++|.+... .......+..|+.++..++|+||+++
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~   69 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL   69 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceE
Confidence            4577889999999999999988765555689987532 22234457789999999999999863

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03212 serine/threonine kinase US3; Provisional

Probab=98.82  E-value=2e-08  Score=55.29  Aligned_cols=57  Identities=16%  Similarity=0.149  Sum_probs=46.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|...+.||.|+||.||.+........+++|...      ...+.+|+.++..++|+||+++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~  148 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQL  148 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCE
Confidence            56899999999999999999987665566888642      2346789999999999999864

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.82  E-value=3.3e-08  Score=51.39  Aligned_cols=63  Identities=19%  Similarity=0.291  Sum_probs=48.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.+|.|.|+.||.+........+++|.+...   .......+..|+.++..++|+|++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   67 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKY   67 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeee
Confidence            4678889999999999999987655555588876432   22334568889999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=98.82  E-value=2.4e-08  Score=52.09  Aligned_cols=63  Identities=17%  Similarity=0.194  Sum_probs=47.2

Q ss_pred             cCcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+...   .....+++|.+... .......+..|+..+..+.|+|++++
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   71 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRL   71 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeE
Confidence            45777899999999999998764   23345588887543 22334568899999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.82  E-value=2.5e-08  Score=54.25  Aligned_cols=63  Identities=21%  Similarity=0.379  Sum_probs=48.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||.+........+|+|.+....   ......+..|+.++..+.|+|++++
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~   66 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKM   66 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceE
Confidence            36788899999999999999877655566999885321   2233457788899999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.82  E-value=3.9e-08  Score=52.93  Aligned_cols=65  Identities=12%  Similarity=0.161  Sum_probs=50.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.+|+|++|.||.+.....+..+++|.+... .......+..|+.++..++|+|++++
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   68 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGI   68 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCch
Confidence            346788999999999999999987655555699987532 22234567889999999999999863

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.81  E-value=3.7e-08  Score=52.45  Aligned_cols=63  Identities=22%  Similarity=0.256  Sum_probs=48.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.+|+|.|+.||.+.....+..+++|.+... .......+..|+.++..++|+|++++
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   64 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGF   64 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            3678889999999999999987765566688877533 22234568889999999999999863

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.81  E-value=4.5e-08  Score=53.24  Aligned_cols=65  Identities=15%  Similarity=0.203  Sum_probs=50.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+........+++|.+...  .......+.+|+.++..++|+|++++
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~   88 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL   88 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCcccc
Confidence            457899999999999999999987655555599987532  22334567889999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=98.81  E-value=2.8e-08  Score=52.35  Aligned_cols=60  Identities=28%  Similarity=0.437  Sum_probs=45.9

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.||+|+||.||.+.....+..+|+|.+....   ......+.+|+.++..+.|+|+++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~   64 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVS   64 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEE
Confidence            567789999999999999886555566999875321   122345778999999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.81  E-value=1.8e-08  Score=57.40  Aligned_cols=66  Identities=15%  Similarity=0.186  Sum_probs=52.8

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....+|.....||.|.|+.|..+.......-+|+|.++..  +....+.+.+|+.+|..+.|||||+|
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl  120 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKL  120 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeee
Confidence            3456788899999999999999988754444499998653  33445668999999999999999875

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.81  E-value=2.6e-08  Score=52.31  Aligned_cols=61  Identities=18%  Similarity=0.343  Sum_probs=47.4

Q ss_pred             CcccceeeeecCCccEEEEEEc----CCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILW----HSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .|.....+|+|+||.||.+...    .....+++|.+........+.+..|+.++..+.|+|+++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   69 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVK   69 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeE
Confidence            5677789999999999998742    233445899876554444567889999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.81  E-value=2.2e-08  Score=51.93  Aligned_cols=62  Identities=24%  Similarity=0.359  Sum_probs=49.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..++|.....||.|.||.||.+....+..+ ++|.+.... .....+..|+.++..+.|+|+++
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~-a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~   65 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKV-AIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVR   65 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceE-EEEEecCCC-CcHHHHHHHHHHHHhcCCcCeee
Confidence            345678889999999999999987666555 999875433 23567889999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.79  E-value=7.3e-09  Score=53.69  Aligned_cols=64  Identities=22%  Similarity=0.384  Sum_probs=51.2

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+..+|...+.+|.|+++.||.+....+..+ ++|.+..........+..++..+..++|+|+++
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~-~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   66 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRV-AIKILKSDDLLKQQDFQKEVQALKRLRHKHLIS   66 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcE-EEEeccccchhhHHHHHHHHHHHhcCCCcchhh
Confidence            3456688889999999999999988775444 888886554444667889999999999999876

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.79  E-value=4.8e-08  Score=51.49  Aligned_cols=64  Identities=22%  Similarity=0.229  Sum_probs=48.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++++|...+.||+|.++.||.+.....+..+++|.+.... ......+.+|+..+..++|+|+++
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~   67 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVL   67 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeE
Confidence            3567888899999999999999876544455999874332 222345678899999999999975

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.79  E-value=2.4e-08  Score=54.55  Aligned_cols=65  Identities=22%  Similarity=0.285  Sum_probs=50.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+........+|+|.+...   .......+..++.++..++|+|++++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~  108 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL  108 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeE
Confidence            346788899999999999999988766666699987432   22234457788899999999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.79  E-value=3e-08  Score=53.30  Aligned_cols=68  Identities=15%  Similarity=0.180  Sum_probs=52.3

Q ss_pred             HHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           11 IAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        11 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +..++++|.....||.|.|+.||.+.....+..+++|.+...  .....+.+..|+.++..+.|+|++++
T Consensus         5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~   74 (328)
T cd07856           5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISL   74 (328)
T ss_pred             eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeE
Confidence            345678899999999999999999987755555588876432  22234667789999999999999863

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=98.78  E-value=4.1e-08  Score=52.95  Aligned_cols=62  Identities=19%  Similarity=0.370  Sum_probs=48.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|.....||+|+||.||.+.....+..+|+|.+...   .......+..++.++..+.|+|++++
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~   66 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKL   66 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccch
Confidence            577889999999999999998755556699988532   12334568889999999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.78  E-value=5.6e-08  Score=51.00  Aligned_cols=62  Identities=24%  Similarity=0.353  Sum_probs=47.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|+....+|.|.++.+|++.....+..+++|.+....  ......+..|++.+..++|+|++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   64 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL   64 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcch
Confidence            4677789999999999999886555555898875322  2223568889999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=98.78  E-value=1.9e-08  Score=54.34  Aligned_cols=65  Identities=20%  Similarity=0.332  Sum_probs=47.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCCc-cccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+...     .....+|+|.+.... ......+..|+.++..+ +|+|++++
T Consensus         5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~   76 (343)
T cd05103           5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   76 (343)
T ss_pred             chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhh
Confidence            4457888899999999999998742     233456999885432 22345688899999999 68998763

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.78  E-value=5e-08  Score=51.72  Aligned_cols=64  Identities=17%  Similarity=0.331  Sum_probs=50.4

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ....|...+.+|+|.++.+|.+........+++|.+........+.+..|+.++..++|+|+++
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   80 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVN   80 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEee
Confidence            4467888899999999999999876444455999885444444566888999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.78  E-value=9.2e-08  Score=51.69  Aligned_cols=64  Identities=22%  Similarity=0.313  Sum_probs=48.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|.....||.|++|.||++.....+..+++|.+...  .......+..++.++..+.|+|++++
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~   79 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGL   79 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccch
Confidence            36788899999999999999987654455599987432  12223457789999999999999863

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=98.78  E-value=3.2e-08  Score=51.92  Aligned_cols=61  Identities=20%  Similarity=0.369  Sum_probs=48.1

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |+....+|+|.++.+|++........+++|.+..........+..|+.++..++|+|++++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~   67 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL   67 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeE
Confidence            4555779999999999998876566668888755444456678889999999999999863

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.78  E-value=7.6e-08  Score=50.47  Aligned_cols=62  Identities=24%  Similarity=0.335  Sum_probs=48.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|+..+.+|.|.++.+|++.....+..+++|.+.... ......+..|+.++..++|+|++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   63 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRL   63 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeee
Confidence            4677889999999999999987656666999875432 2234556788999999999999863

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=98.78  E-value=3.9e-08  Score=51.06  Aligned_cols=62  Identities=21%  Similarity=0.343  Sum_probs=48.7

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+.|...+.+|+|+++.||.+....+.. +++|.+.... ...+.+..|+.++..++|+|+++
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~-v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~   65 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTP-VAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQ   65 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeE-EEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccc
Confidence            34568888999999999999998755544 4899875432 23566889999999999999986

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.77  E-value=4.9e-08  Score=58.60  Aligned_cols=63  Identities=11%  Similarity=0.106  Sum_probs=49.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+.....+..+++|.+...   .....+.+.+|+.++..+.|+|++++
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl   67 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPV   67 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeE
Confidence            4678889999999999999988765555699988532   12234568899999999999999863

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.77  E-value=2.9e-08  Score=53.36  Aligned_cols=63  Identities=25%  Similarity=0.341  Sum_probs=49.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++...+.+|+|.||.||.+.....+...|+|.....+....+.+.+|+.++..++|+|||+.
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~   79 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQY   79 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEee
Confidence            345667899999999999998865445559998755432336678899999999999999973

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.77  E-value=4.8e-08  Score=50.60  Aligned_cols=64  Identities=16%  Similarity=0.345  Sum_probs=50.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|.....+|.|.++.+|.+........+++|.+........+.+..++.++..++|+|++++
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~   65 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAY   65 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhce
Confidence            3567888999999999999998765444558888765444456778899999999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=98.77  E-value=2.7e-08  Score=58.21  Aligned_cols=61  Identities=16%  Similarity=0.258  Sum_probs=50.4

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ....+.|.+|+|+.||.+....++.-+|+|++-..+....+...+|+.+|+.|. |+|||.+
T Consensus        39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~y  100 (738)
T KOG1989|consen   39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSY  100 (738)
T ss_pred             EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeE
Confidence            466789999999999999987663344999886667777888999999999995 9999963

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=98.77  E-value=5.2e-08  Score=50.73  Aligned_cols=63  Identities=17%  Similarity=0.200  Sum_probs=47.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCC---cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.+|+|+||.||++.....   ...+++|.+... .......+..|+.++..++|+|++++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   70 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL   70 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceE
Confidence            4678889999999999999987432   334588887543 23334578889999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=98.77  E-value=1e-08  Score=59.43  Aligned_cols=62  Identities=19%  Similarity=0.274  Sum_probs=48.3

Q ss_pred             CcccceeeeecCCccEEEEEEcC----CcEEEEEEEccC-CccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWH----SVEIKSVKRLSK-GSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~----~~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .......||.|.||.||.|.+..    ....+|+|.... ....+.+.|..|+.+|+.++||||++|
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikL  456 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKL  456 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhhe
Confidence            34567899999999999998743    233457887644 345567889999999999999999975

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.77  E-value=8.3e-08  Score=51.89  Aligned_cols=66  Identities=15%  Similarity=0.255  Sum_probs=50.4

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|.....||.|.+|.||.+.....+..+++|.+...  .......+..|+.++..+.|+|++++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   79 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGL   79 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccce
Confidence            3567799999999999999999987655555599987432  12223457789999999999999763

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.77  E-value=5.8e-08  Score=50.60  Aligned_cols=61  Identities=20%  Similarity=0.263  Sum_probs=46.9

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-----cccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-----RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|...+.+|+|.+|.+|.+........+++|.+....     ......+.+|+.++..++|+|+++
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   68 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ   68 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeee
Confidence            6788899999999999999876555555888774321     123356788999999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.77  E-value=1.8e-08  Score=55.04  Aligned_cols=64  Identities=23%  Similarity=0.306  Sum_probs=49.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+........+|+|.+...   .......+..|+.++..++|+|++++
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~  108 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQL  108 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceE
Confidence            45688889999999999999988766666699987432   22233457788999999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.77  E-value=6.6e-08  Score=51.13  Aligned_cols=66  Identities=21%  Similarity=0.341  Sum_probs=50.3

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|+....+|.|.++.||.+.....+..+++|.+....  ......+..|+.++..++|+|++++
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~   71 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNL   71 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeee
Confidence            45677888999999999999999987555555888875322  2223456788999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.77  E-value=7.3e-08  Score=50.17  Aligned_cols=62  Identities=21%  Similarity=0.251  Sum_probs=47.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-----ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-----SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|...+.+|+|.+|.||.+.....+..+++|.+...     .......+..|+..+..+.|+|+++
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   68 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ   68 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeee
Confidence            4678889999999999999987665555589876422     1122456788999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=98.76  E-value=2.4e-08  Score=55.16  Aligned_cols=66  Identities=20%  Similarity=0.210  Sum_probs=49.0

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ...+.|...+.||.|+||.||.+....     ....+|+|.+... .....+.+..|+.++..+. |+||+++
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l  106 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL  106 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            345677888999999999999987532     1223599988543 2333467899999999996 9999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=98.76  E-value=1.9e-08  Score=52.34  Aligned_cols=63  Identities=16%  Similarity=0.353  Sum_probs=49.1

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|.....+|+|.|+.+|.+........+++|.+..........+.+++.++..++|+|+++
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~   70 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVA   70 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeee
Confidence            346777788999999999999876555566999875443334456788999999999999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.76  E-value=6.4e-08  Score=51.23  Aligned_cols=63  Identities=17%  Similarity=0.326  Sum_probs=49.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+.|...+.+|+|+++.+|++........+++|.+........+.+..|+.++..++|+|+++
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~   80 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVN   80 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeee
Confidence            467888899999999999999875444445888875443344567888999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=98.76  E-value=1.7e-08  Score=55.83  Aligned_cols=67  Identities=21%  Similarity=0.228  Sum_probs=49.1

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ....+++...+.||+|+||.||.+....     ....+++|.+... .....+.+..|+.++..+. |+|++++
T Consensus        33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~  106 (401)
T cd05107          33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNL  106 (401)
T ss_pred             eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEE
Confidence            3344567778999999999999998532     2344599998643 2223456889999999997 9999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=98.76  E-value=5.1e-08  Score=51.75  Aligned_cols=63  Identities=21%  Similarity=0.286  Sum_probs=46.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcC----------------CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH----------------SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~----------------~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+....                ....+++|.+... .......+.+|+.++..++|+|++++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            456777899999999999987532                2234588887543 22234568899999999999999863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.76  E-value=3.4e-08  Score=53.99  Aligned_cols=67  Identities=19%  Similarity=0.259  Sum_probs=51.4

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....++|...+.||+|+||.||.+........+++|.+...   .......+.++..++..++|+|++++
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~  108 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL  108 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            33447899999999999999999998766666699987432   22234457788889999999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=98.76  E-value=7.1e-08  Score=50.27  Aligned_cols=59  Identities=25%  Similarity=0.362  Sum_probs=45.3

Q ss_pred             cceeeeecCCccEEEEEEc----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           20 SYNKLGEGRFGPVYKVILW----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        20 ~~~~ig~g~~~~v~~~~~~----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.||.|.||.||.+...    .....+++|.+... .....+.+.+++..+.+++|+|++++
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~   66 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKL   66 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-E
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccc
Confidence            4578999999999999876    23445588988543 33346789999999999999999863

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.75  E-value=9.6e-08  Score=50.34  Aligned_cols=62  Identities=18%  Similarity=0.224  Sum_probs=48.9

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|...+.+|.|.++.+|.+........+++|.+... .......+.+|++.+..++|+||+++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   64 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKY   64 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeee
Confidence            577788999999999999998765566689887533 22334668899999999999999863

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=98.75  E-value=2.7e-08  Score=56.16  Aligned_cols=65  Identities=22%  Similarity=0.348  Sum_probs=52.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|+....||+|+||.||.+.-+..+.++|+|.+....   ..+...+..|-.+|....++++|+|
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKL  206 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKL  206 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEE
Confidence            4478999999999999999999988888888999996542   3345566777778888889999875

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.75  E-value=7.3e-08  Score=51.09  Aligned_cols=65  Identities=14%  Similarity=0.310  Sum_probs=50.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....|.....+|.|.++.+|.+........+++|.+..........+..|+.++..+.|+|++++
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~   82 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY   82 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeE
Confidence            34567888899999999999998765444558888755444445678889999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.75  E-value=5.4e-08  Score=51.07  Aligned_cols=61  Identities=16%  Similarity=0.261  Sum_probs=47.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|+..+.+|+|.++.||.+.....+..+++|.+...  .....+.+..|+.++..+.|+|+++
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   64 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVN   64 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhh
Confidence            567779999999999999998765555699987432  1123456788999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.75  E-value=4.7e-08  Score=51.51  Aligned_cols=70  Identities=24%  Similarity=0.346  Sum_probs=52.9

Q ss_pred             ehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701            7 DFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus         7 ~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .+..+..++++|.....+|+|.++.+|.+........+++|.+.... .....+..++.++.++ .|+|+++
T Consensus        13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~   83 (291)
T cd06639          13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVK   83 (291)
T ss_pred             hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEE
Confidence            34556677889999999999999999999886555555888875432 1234566788888888 7999986

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.75  E-value=6.6e-08  Score=52.06  Aligned_cols=63  Identities=22%  Similarity=0.373  Sum_probs=47.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|.||.||.+........+|+|.+...   .....+.+..+..++..++|+|++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~   66 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNL   66 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCce
Confidence            3577889999999999999988765556699987532   12234557788888888999999753

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.74  E-value=6.2e-08  Score=50.25  Aligned_cols=63  Identities=22%  Similarity=0.352  Sum_probs=49.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|.....+|.|+++.||.+.......+ ++|.+.... .....+..|+.++..+.|+|++++
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~-~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~   66 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKV-AVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQL   66 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceE-EEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeee
Confidence            456788889999999999999987655444 898875432 234678899999999999999863

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=98.74  E-value=6.6e-08  Score=52.36  Aligned_cols=63  Identities=19%  Similarity=0.345  Sum_probs=47.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCC-cEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHS-VEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|.....||.|+||.||.+..... ...+++|.+...   .....+.+..|+.++..++|+|++++
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~   96 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNL   96 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcce
Confidence            5688889999999999999976543 345589887432   22334567889999999999999863

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=98.74  E-value=7.6e-08  Score=50.69  Aligned_cols=62  Identities=18%  Similarity=0.227  Sum_probs=48.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|.....+|.|.++.||.+........+++|.+.... ......+.+|+.++..++|+|+++
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   67 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVT   67 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceee
Confidence            56788899999999999999887555566999875322 222345678999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.74  E-value=5.9e-08  Score=50.29  Aligned_cols=61  Identities=21%  Similarity=0.343  Sum_probs=47.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|...+.+|.|+++.+|.+........+++|.+...   .....+.+..|+..+..++|+|+++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   64 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVN   64 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHH
Confidence            467789999999999999988754555599987532   2234567888999999999999975

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.74  E-value=9.7e-08  Score=50.65  Aligned_cols=63  Identities=17%  Similarity=0.321  Sum_probs=49.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|.....+|.|.++.+|.+.....+..+++|.+..........+..++..+..++|+|++++
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   81 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNF   81 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeee
Confidence            458888999999999999998765555558998754444445678889999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=98.73  E-value=6.1e-08  Score=50.31  Aligned_cols=61  Identities=25%  Similarity=0.404  Sum_probs=48.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|...+.+|+|++|.||.+....+..+ ++|.+.... ...+.+..|+.++..++|+|+++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v-~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~   65 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKV-AVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVR   65 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceE-EEEEccCCc-hhHHHHHHHHHHHHhCCCCCeee
Confidence            35678889999999999999987665555 888775432 23567889999999999999986

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.73  E-value=6.4e-08  Score=58.52  Aligned_cols=67  Identities=21%  Similarity=0.295  Sum_probs=53.3

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....+.|.....||.|.||.||.+........+++|.+...  .......+..|+.++..+.|+||+++
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl   77 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRY   77 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeE
Confidence            44557899999999999999999998766666688887432  23345678899999999999999864

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.72  E-value=2.3e-08  Score=57.79  Aligned_cols=62  Identities=23%  Similarity=0.354  Sum_probs=49.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .-|.....||-|+||.||.+.......+||+|.+.-.   .....++.+.|++.+..+.|||.+.
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntie   90 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIE   90 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccc
Confidence            3467778899999999999988777777799987422   3334577899999999999999875

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=98.72  E-value=7.4e-08  Score=49.90  Aligned_cols=59  Identities=19%  Similarity=0.367  Sum_probs=46.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|...+.+|+|+|+.||.+........ ++|.+.... .....+..|+..+..++|+|+++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~-a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~   63 (256)
T cd05114           5 ELTFMKELGSGQFGVVHLGKWRAQIKV-AIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQ   63 (256)
T ss_pred             HcEEeeEecCCcCceEEEEEeccCceE-EEEecccCC-ccHHHHHHHHHHHHHCCCCCcee
Confidence            466778899999999999987655454 888775332 23456888999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.71  E-value=1.1e-07  Score=49.44  Aligned_cols=62  Identities=21%  Similarity=0.323  Sum_probs=46.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc------cccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS------RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|+....+|+|.++.+|.+........+++|.+....      ....+.+..|+..++.++|+|++++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   68 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRM   68 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehh
Confidence            3667788999999999999875544555888874321      1124568889999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.71  E-value=8.1e-08  Score=52.22  Aligned_cols=62  Identities=23%  Similarity=0.378  Sum_probs=48.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.||+|+||.||.+........+++|.+...   .......+..|+.++..+.|+|+++
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~   65 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVK   65 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEee
Confidence            3677889999999999999988765666699988532   1223456778888999999999986

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.71  E-value=5.8e-08  Score=54.12  Aligned_cols=64  Identities=14%  Similarity=0.226  Sum_probs=52.0

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc-ccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+.|+...+||.|..+.||.++......+||+|.+..... .+...+.+|+..|.-++||||++
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~   88 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVT   88 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcce
Confidence            44678999999999999999998776667779999854322 23577889999999999999985

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.71  E-value=4.6e-09  Score=58.61  Aligned_cols=65  Identities=23%  Similarity=0.282  Sum_probs=49.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc-cHHHHHHHHHHHHHcC-CCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ..+.|...+.+|.|.||.||.+.....+..||+|.+...-.. +.-.-.+|+..++++. |+||++|
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL   74 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKL   74 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhh
Confidence            345677778899999999999988766666799988543222 2234578999999998 9999975

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=98.71  E-value=1.1e-07  Score=50.16  Aligned_cols=60  Identities=28%  Similarity=0.442  Sum_probs=45.3

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.||+|+||.||.+........+++|.+....   ......+..|+.++..++|+|+++
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~   64 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVN   64 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCcee
Confidence            556688999999999999886555566999875322   122345778999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=98.70  E-value=5.2e-08  Score=50.78  Aligned_cols=64  Identities=20%  Similarity=0.324  Sum_probs=49.3

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .+.+.|.....+|.|.||.||.+........+++|.+.... .....+..++..+..+ +|+|+++
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~   67 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIAT   67 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeee
Confidence            45667888899999999999999887655666898875432 2345677888888888 6999986

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=98.70  E-value=9e-08  Score=49.45  Aligned_cols=55  Identities=16%  Similarity=0.218  Sum_probs=42.6

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|+|.||.||.+.....+..+++|..... .......+.+|+.++..++|+|+++
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   57 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR   57 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            589999999999988655555589977433 2233456889999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.70  E-value=2e-07  Score=50.52  Aligned_cols=66  Identities=15%  Similarity=0.211  Sum_probs=51.0

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|.....+|+|++|.||.+.....+..+++|.+...  .......+.+|+.++..+.|+|++++
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   80 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGL   80 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcce
Confidence            4567799999999999999999988755555599987432  22334567789999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.70  E-value=1.6e-07  Score=49.29  Aligned_cols=62  Identities=19%  Similarity=0.293  Sum_probs=47.3

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|...+.||.|.++.||.+........+++|.+...  .......+..|+.++..++|+|++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   64 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCL   64 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeee
Confidence            366678899999999999988755556699987532  22234567789999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=98.70  E-value=9.3e-08  Score=51.35  Aligned_cols=63  Identities=21%  Similarity=0.317  Sum_probs=48.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|.....||+|.||.||.+.....+..+++|.+....   ......+..++.++..+.|+|++++
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~   66 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQL   66 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcce
Confidence            36778899999999999999887655566999885321   2234557788888999999999763

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=98.70  E-value=7.1e-08  Score=50.70  Aligned_cols=62  Identities=16%  Similarity=0.357  Sum_probs=47.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|+..+.||+|++|.+|.+........+++|.+... .......+.+|+.++..+.|+|++++
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~   64 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDF   64 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhh
Confidence            566778899999999999988755555589877532 22334568889999999999999763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=98.70  E-value=7.7e-08  Score=51.64  Aligned_cols=57  Identities=21%  Similarity=0.241  Sum_probs=43.1

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.||+|+||.||.+.....+..+++|.+...   .......+..|+.++..++|+|++++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~   60 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL   60 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcce
Confidence            3689999999999987655555699988532   22234557788999999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.69  E-value=1.7e-07  Score=49.53  Aligned_cols=61  Identities=23%  Similarity=0.300  Sum_probs=45.8

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc-----cHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ-----GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.+|.|.++.+|.+.....+..+++|.+......     ....+..|+.++..++|+|++++
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~   67 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGL   67 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhh
Confidence            56668899999999999998755555599988543221     23456778899999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=98.69  E-value=7.5e-08  Score=51.67  Aligned_cols=56  Identities=21%  Similarity=0.233  Sum_probs=42.9

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +.||+|.||.||.+.....+..+++|.+...   .......+..|+.++..+.|+|+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~   59 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTA   59 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCC
Confidence            3689999999999988765556699987532   1223455778899999999999985

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.69  E-value=1.1e-07  Score=51.15  Aligned_cols=62  Identities=24%  Similarity=0.376  Sum_probs=47.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.||+|+||.||.+........+|+|.+...   .......+..+..++..+.|+|+++
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   65 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITT   65 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEee
Confidence            3677889999999999999988766666699987432   1222345777888888899999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.69  E-value=1.3e-07  Score=50.94  Aligned_cols=63  Identities=13%  Similarity=0.200  Sum_probs=49.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|+....+|.|.++.||.+.....+..+++|.+...  .......+..|+.++..+.|+|+++
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   68 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIA   68 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccC
Confidence            36788889999999999999988765556699987532  2223456778999999999999986

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.69  E-value=7.7e-08  Score=50.44  Aligned_cols=64  Identities=25%  Similarity=0.279  Sum_probs=48.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..++|...+.||+|.||.||.+....    ....+++|.+... .......+..|+..+..+.|+|+++
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~   72 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILP   72 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            34568888999999999999998754    2344478877533 3334566888999999999999986

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.69  E-value=9.5e-08  Score=49.65  Aligned_cols=62  Identities=23%  Similarity=0.388  Sum_probs=48.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+.+...+.+|+|+++.||.+....+..+ ++|.+.... ...+.+.+|+.++..+.|+|+++
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~-~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~   65 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVK   65 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccE-EEEecCCCh-hHHHHHHHHHHHHHhcCCCCcce
Confidence            345688889999999999999986555555 888775432 23467888999999999999986

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.69  E-value=1.8e-07  Score=49.52  Aligned_cols=65  Identities=15%  Similarity=0.279  Sum_probs=48.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|.....+|+|.++.||.+........+++|.+...  .......+..|+.++..+.|+|++++
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   76 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL   76 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccce
Confidence            445788899999999999999988765566699987432  12223345678899999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=98.69  E-value=1.8e-07  Score=48.34  Aligned_cols=62  Identities=24%  Similarity=0.448  Sum_probs=47.9

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|...+.+|+|.++.+|.+........+++|.+...  .......+..++..++.++|+|++++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   64 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRY   64 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehh
Confidence            366678899999999999988755555588887432  33345678899999999999999863

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=98.69  E-value=5e-08  Score=53.40  Aligned_cols=65  Identities=23%  Similarity=0.320  Sum_probs=47.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+....     ....+++|.+... .......+..|+.++..+ .|+||+++
T Consensus        36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~  107 (374)
T cd05106          36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNL  107 (374)
T ss_pred             cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeE
Confidence            34568889999999999999887421     2234599988543 222345688899999998 89999863

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=98.69  E-value=1.2e-07  Score=49.08  Aligned_cols=60  Identities=25%  Similarity=0.303  Sum_probs=45.9

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccH--HHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGM--EELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.||+|+||.||++........+++|.+........  .....|+..+..+.|+|+++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~   62 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQ   62 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCH
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccc
Confidence            3456899999999999999987776669999865533322  23455888999999999975

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.68  E-value=1.3e-07  Score=49.20  Aligned_cols=61  Identities=23%  Similarity=0.239  Sum_probs=44.9

Q ss_pred             cccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.+|+|+||.||.+....   ....+++|.+...  .......+..|+..+..++|+|++++
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   66 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL   66 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            3456889999999999997643   2244589987543  22234568899999999999999863

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=98.68  E-value=1e-07  Score=51.31  Aligned_cols=56  Identities=23%  Similarity=0.248  Sum_probs=43.3

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||+|+||.||.+.....+..+|+|.+...   .......+..|+.++..+.|+|++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   60 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL   60 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcce
Confidence            589999999999988765556699988532   22334567889999999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.68  E-value=1.5e-07  Score=50.73  Aligned_cols=63  Identities=14%  Similarity=0.257  Sum_probs=48.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+.|.....+|.|+++.+|.+.....+..+++|.+...  .......+..|+.++..++|+|+++
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~   68 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIA   68 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccc
Confidence            34678889999999999999987655555699987532  2223456778999999999999986

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.68  E-value=2.1e-07  Score=48.28  Aligned_cols=60  Identities=23%  Similarity=0.426  Sum_probs=47.2

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--ccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.||+|.++.+|.+........+++|.+.....  .....+..|+.++..++|+|+++
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~   63 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVK   63 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhh
Confidence            5667899999999999998765555558888754332  24567889999999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.68  E-value=1.2e-07  Score=49.58  Aligned_cols=62  Identities=19%  Similarity=0.392  Sum_probs=47.9

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|+....+|.|+++.+|++........+++|.+.... ......+..|+..++.+.|+|++++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   64 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKY   64 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeee
Confidence            4666788999999999999887656666999875332 3334568889999999999999763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.68  E-value=7.3e-08  Score=50.13  Aligned_cols=63  Identities=19%  Similarity=0.255  Sum_probs=47.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||.|.+|.||.+........+++|.+...   .......+.+|+.++..+.|+|++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~   67 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY   67 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhh
Confidence            3567778899999999999987544445588876432   22334578889999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.68  E-value=1.8e-07  Score=48.63  Aligned_cols=62  Identities=21%  Similarity=0.331  Sum_probs=48.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.+|+|.++.+|.+.....+..+++|.+...   .......+.+|+.++..+.|+|+++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~   66 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIK   66 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeee
Confidence            4678889999999999999988744455588877432   2223567889999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.68  E-value=1.2e-07  Score=50.38  Aligned_cols=65  Identities=23%  Similarity=0.330  Sum_probs=48.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||.|.++.||.+.....+..+++|.+....  ......+..|+.++..++|+|++++
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   71 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVEL   71 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcce
Confidence            4567888999999999999999887655556999874322  1112345678999999999999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.67  E-value=1.6e-07  Score=49.75  Aligned_cols=64  Identities=19%  Similarity=0.260  Sum_probs=48.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--ccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|.....||.|.++.||.+........+++|.+.....  .....+.+|+..+..++|+|++++
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   72 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPL   72 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccch
Confidence            4688999999999999999998765444558887743221  123456788999999999999863

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.67  E-value=1.8e-07  Score=48.74  Aligned_cols=62  Identities=21%  Similarity=0.246  Sum_probs=47.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-----ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-----SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|...+.+|+|.+|.+|.+.....+..+++|.+...     .......+.+|+.++..+.|+|+++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   68 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ   68 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcce
Confidence            3678889999999999999987654555588876321     1223456888999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.67  E-value=1.7e-07  Score=48.59  Aligned_cols=63  Identities=21%  Similarity=0.291  Sum_probs=47.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-----cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-----RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.+|.|.++.+|.+........+++|.+....     ......+.+|+.++.+++|+|++++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   69 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQY   69 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeee
Confidence            46888899999999999999876545555888874321     1123567889999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=98.67  E-value=2.1e-07  Score=48.79  Aligned_cols=61  Identities=18%  Similarity=0.298  Sum_probs=46.8

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|+....+|+|.++.+|.+........+++|.+...  .....+.+..|+.++..+.|+|+++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   64 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVN   64 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEee
Confidence            567778999999999999988755555589887432  1222355788999999999999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.67  E-value=1.5e-07  Score=49.06  Aligned_cols=61  Identities=21%  Similarity=0.309  Sum_probs=47.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+.|.....+|+|+++.||.+.......+ ++|.+..... ....+..|+.++..++|+|+++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v-alK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~   65 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQ   65 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceE-EEEecccCcc-CHHHHHHHHHHHHhCCCCCcce
Confidence            34578889999999999999987655554 8998854322 2456888999999999999976

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=98.67  E-value=7.5e-08  Score=51.42  Aligned_cols=55  Identities=25%  Similarity=0.401  Sum_probs=42.4

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ||+|+||.||.+........+|+|.+...   .......+..|+.++..++|+||+++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   58 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPL   58 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEece
Confidence            58999999999988765556699987532   22334567889999999999999863

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.66  E-value=1.3e-07  Score=49.61  Aligned_cols=64  Identities=22%  Similarity=0.297  Sum_probs=49.0

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..++|...+.+|+|.++.||.+....     ....+++|...... ......+..|+.++..++|+|+++
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   73 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR   73 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEee
Confidence            34678888999999999999998754     44555888775332 223456888999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=98.66  E-value=1.1e-07  Score=49.97  Aligned_cols=62  Identities=23%  Similarity=0.337  Sum_probs=45.6

Q ss_pred             cCcccceeeeecCCccEEEEEEc----CCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW----HSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~----~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|+....||+|+||.||++...    .....+++|.+.... ......+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   71 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVC   71 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeee
Confidence            45677789999999999998742    122344888875432 223356888999999999999986

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.66  E-value=7.8e-08  Score=50.57  Aligned_cols=62  Identities=16%  Similarity=0.249  Sum_probs=47.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|+..+.||+|.+|.||.+.....+..+++|.+... .......+..|+.++..++|+|+++
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   67 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVS   67 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcce
Confidence            4567778899999999999987655555588876432 2233467889999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.66  E-value=1.3e-07  Score=50.36  Aligned_cols=64  Identities=20%  Similarity=0.340  Sum_probs=48.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +...|.....+|+|.++.+|.+.....+..+++|.+...   .....+.+..|+.++..++|+|+++
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~   79 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIE   79 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEE
Confidence            445578889999999999999987655555589887432   2223456888999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=98.66  E-value=1.7e-07  Score=49.44  Aligned_cols=62  Identities=27%  Similarity=0.329  Sum_probs=48.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|.....||.|.++.+|.+........+++|.+...   .......+..|+.++..+.|+|++++
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   66 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNL   66 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccce
Confidence            577789999999999999988755555699987432   12234568889999999999999863

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.65  E-value=2.3e-07  Score=48.64  Aligned_cols=60  Identities=22%  Similarity=0.450  Sum_probs=45.6

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |.....||.|.||.||.+........+++|...... ......+.+++.++..++|+|+++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   66 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK   66 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeE
Confidence            556688999999999999876555555899874322 223456888999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.65  E-value=2.2e-07  Score=49.41  Aligned_cols=61  Identities=15%  Similarity=0.212  Sum_probs=46.9

Q ss_pred             cccceeeeecCCccEEEEEEcC--CcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWH--SVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |.....+|+|.++.||.+....  ....+++|.+....   ......+..|+.++..++|+|++++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   67 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSL   67 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccce
Confidence            5667889999999999998865  45556999885422   2234567789999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.65  E-value=1.3e-07  Score=53.64  Aligned_cols=65  Identities=17%  Similarity=0.169  Sum_probs=50.3

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...+.|...+.||+|+||.||.+........+|+|.+...  .......+..|+.++..+.|+|+++
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~   95 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVK   95 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEE
Confidence            4457899999999999999999987655556699988543  2333456778888899999999875

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.65  E-value=1.8e-07  Score=49.08  Aligned_cols=62  Identities=18%  Similarity=0.274  Sum_probs=48.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|+....+|.|.++.+|.+.....+..+++|.+...  .......+..|+.++..+.|+|++++
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   65 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNL   65 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeeh
Confidence            577789999999999999988765556699987532  22234678899999999999999763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.65  E-value=1.7e-07  Score=48.90  Aligned_cols=59  Identities=24%  Similarity=0.282  Sum_probs=44.1

Q ss_pred             ccceeeeecCCccEEEEEEcCCcE--EEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSVE--IKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~~--~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .....||+|+||.||.+.......  .+++|.+...  .....+.+..|+.++..++|+|+++
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   64 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMR   64 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            345789999999999998754332  3488877432  2334567888999999999999986

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.65  E-value=2.7e-07  Score=47.88  Aligned_cols=62  Identities=23%  Similarity=0.349  Sum_probs=48.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|+..+.+|.|+++.+|++........+++|.+.... ......+..|+..+..+.|+|+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK   63 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEE
Confidence            36778899999999999999876555555888875322 224567889999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=98.65  E-value=2.2e-07  Score=52.42  Aligned_cols=61  Identities=7%  Similarity=-0.010  Sum_probs=46.2

Q ss_pred             cccceeeeecCCccEEEEEEcCC-cEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHS-VEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.+|.|+++.||.+..... ...+++|.+..........+..|+.++..++|+||+++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~  130 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKH  130 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEE
Confidence            67789999999999999876543 34447776644333444567789999999999999863

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.65  E-value=3.2e-07  Score=48.28  Aligned_cols=61  Identities=20%  Similarity=0.234  Sum_probs=42.9

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHc---CCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVS---NYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l---~h~niv~l   78 (78)
                      |.....||+|++|.||.+.....+..+++|.+....  ......+..|+.++..+   .|+|++++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~   67 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRL   67 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeee
Confidence            566788999999999999987666666999875321  11223455666666554   69999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=98.64  E-value=1e-07  Score=49.45  Aligned_cols=60  Identities=23%  Similarity=0.368  Sum_probs=47.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.+|.|+++.||.+....+..+ ++|.+..... ..+.+.+|+.++..++|+|+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~-~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~   65 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKV-AVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQ   65 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCcee-EEEEecCCCC-CHHHHHHHHHHHHhcCCCceEE
Confidence            4577778999999999999987655555 8888754322 2456889999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.64  E-value=3.3e-07  Score=47.99  Aligned_cols=61  Identities=18%  Similarity=0.278  Sum_probs=46.6

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |.....+|.|+++.+|++........+++|.+...  .......+..|+.++..+.|+|++++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   63 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRL   63 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeh
Confidence            34567899999999999988765555689988543  22334567889999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.64  E-value=2.3e-07  Score=48.98  Aligned_cols=63  Identities=21%  Similarity=0.309  Sum_probs=48.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|.....||.|.++.+|++.....+..+++|.+....  ......+..|+..+..+.|+|++++
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   66 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL   66 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeE
Confidence            46778899999999999999887555555899874322  2233567889999999999999863

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.64  E-value=2.8e-07  Score=48.36  Aligned_cols=61  Identities=15%  Similarity=0.237  Sum_probs=47.0

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.+|.|.++.+|++.....+..+++|.+....  ......+..|+.++..+.|+|++++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~   64 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKL   64 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcce
Confidence            566788999999999999886545555888875432  2234678899999999999999863

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.64  E-value=5e-08  Score=57.46  Aligned_cols=56  Identities=18%  Similarity=0.306  Sum_probs=48.2

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      -++|+|.+|.||.+++......-|+|.++.......+.+.+|+.+.+.++|.|||+
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVr  636 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVR  636 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHH
Confidence            67999999999999987655444999997766667888999999999999999986

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=98.64  E-value=1.3e-07  Score=49.61  Aligned_cols=65  Identities=23%  Similarity=0.329  Sum_probs=48.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|+....+|+|+++.||.+....     ....+++|.+... .......+.+|+.++..++|+|++++
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~   74 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL   74 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            45678889999999999999987532     2234588877432 22334568899999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=98.64  E-value=2.7e-07  Score=48.74  Aligned_cols=60  Identities=28%  Similarity=0.441  Sum_probs=45.5

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |+..+.||+|+||.||.+........+++|.+....   ......+..|+.++..++|+|+++
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~   64 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVS   64 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeee
Confidence            556688999999999999887666666999875321   112345678899999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.63  E-value=2.4e-07  Score=47.88  Aligned_cols=62  Identities=23%  Similarity=0.307  Sum_probs=46.9

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|...+.+|+|+++.+|++........+++|.+...  .......+..|+..++.++|+|++++
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~   64 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTF   64 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhh
Confidence            366778999999999999988754445588887432  22334567889999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PHA02988 hypothetical protein; Provisional

Probab=98.63  E-value=2.8e-07  Score=48.70  Aligned_cols=55  Identities=16%  Similarity=0.247  Sum_probs=42.7

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCcccc---HHHHHHHHHHHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQG---MEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+++|+++.||+|.+ .+..+ ++|.+.......   .+.+.+|+.++.++.|+|++++
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~v-avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~   83 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEV-IIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI   83 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEE-EEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            7789999999999987 34444 999885432222   4567899999999999999874

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.63  E-value=2.9e-07  Score=47.63  Aligned_cols=61  Identities=21%  Similarity=0.315  Sum_probs=46.6

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |+..+.+|.|.++.+|++........+++|.+...  .....+.+..++..+..++|+|++++
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   64 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRY   64 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCcccee
Confidence            56668899999999999987655555588877432  23334568889999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.63  E-value=4e-08  Score=52.76  Aligned_cols=63  Identities=19%  Similarity=0.264  Sum_probs=48.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCc-cccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRL-LLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~n-iv~l   78 (78)
                      ..|...+.+|+|.+|.||+++....+..||+|+++...  ......-.+|+.++..+.|+| ++.|
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L   76 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRL   76 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEE
Confidence            34666677999999999999988666677999985432  223455788999999999999 8764

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.63  E-value=3.5e-07  Score=47.35  Aligned_cols=61  Identities=20%  Similarity=0.270  Sum_probs=46.8

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|...+.+|.|++|.+|.+........+++|.+... .....+.+..|+.++..+.|+|+++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   62 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVA   62 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcce
Confidence            356778999999999999987655555589987432 2334566788889999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.63  E-value=1.1e-07  Score=50.45  Aligned_cols=63  Identities=29%  Similarity=0.248  Sum_probs=47.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|.....+|.|+||.+|.+........+++|.+..........+.+|+..+..++|+|++++
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~   83 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEM   83 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhh
Confidence            345556789999999999998765445559998854433445668889999999999999763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.63  E-value=3e-07  Score=47.44  Aligned_cols=60  Identities=28%  Similarity=0.352  Sum_probs=45.7

Q ss_pred             ccceeeeecCCccEEEEEEcCCc----EEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCccccC
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSV----EIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~----~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +..+.+|.|+||.||.+......    ..+++|.+...... ..+.+..|+..+..++|+|++++
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   66 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKL   66 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheE
Confidence            44578999999999999876432    55589988544322 45678899999999999999863

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.63  E-value=3.2e-07  Score=48.94  Aligned_cols=62  Identities=21%  Similarity=0.305  Sum_probs=48.2

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|...+.+|+|.++.||.+........+++|.+.....   ...+.+..++..+..+.|+|++++
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   66 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTL   66 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhh
Confidence            57777899999999999998876555569998854322   234568889999999999999863

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.63  E-value=2.2e-07  Score=47.91  Aligned_cols=54  Identities=20%  Similarity=0.290  Sum_probs=41.8

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .||+|++|.||++....+..+ ++|.+.... ......+..|+..+..+.|+|+++
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~-a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   56 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPV-AVKTCKEDLPQELKIKFLSEARILKQYDHPNIVK   56 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEE-EEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCe
Confidence            589999999999987655555 898875432 223456888999999999999986

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.62  E-value=7.3e-08  Score=52.17  Aligned_cols=64  Identities=13%  Similarity=0.163  Sum_probs=50.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccC--CccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK--GSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +...|.....+|.|.+|.|+.+.....+..+|+|.+..  ......+.-.+|+.+++.++|+||+.
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~   85 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIG   85 (359)
T ss_pred             ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcce
Confidence            33445556889999999999998876556669998852  24445778899999999999999975

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.62  E-value=1.5e-07  Score=48.64  Aligned_cols=61  Identities=23%  Similarity=0.470  Sum_probs=48.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|.....+|.|.++.+|.+........+++|.+.....  .+.+.+|+..+..+.|+|++++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~   63 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKY   63 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeee
Confidence            567888899999999999998876445558888754322  5678899999999999999863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.62  E-value=2e-07  Score=48.66  Aligned_cols=63  Identities=17%  Similarity=0.258  Sum_probs=47.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCC---cEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|.....+|+|++|.||.+.....   ...+++|...... ....+.+.+|+.++..+.|+|++++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~   72 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKL   72 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhce
Confidence            4567778999999999999976432   2334788765432 3345678999999999999999863

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=98.62  E-value=1.1e-07  Score=49.46  Aligned_cols=62  Identities=23%  Similarity=0.334  Sum_probs=48.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|...+.+|+|.++.||.+........+++|.+... ......+.+|+.++..+.|+|++++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~   67 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL   67 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhhe
Confidence            4577778999999999999988765555589887543 2235678899999999999999863

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.62  E-value=1.8e-07  Score=50.36  Aligned_cols=62  Identities=21%  Similarity=0.328  Sum_probs=46.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.||+|+||.||.+........+++|.+...   .......+..+..++..++|+|+++
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   65 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITT   65 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEee
Confidence            3677889999999999999988766666699987432   1222344777888888899999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=98.62  E-value=1.9e-07  Score=49.24  Aligned_cols=62  Identities=23%  Similarity=0.358  Sum_probs=47.3

Q ss_pred             cCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|...+.+|.|+|+.||.+...     .....+++|.+..........+..|+.++.++.|+|+++
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   71 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK   71 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            45777889999999999998742     223445888875544444567889999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.62  E-value=1e-07  Score=49.94  Aligned_cols=61  Identities=23%  Similarity=0.476  Sum_probs=46.5

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |+..+.+|+|.++.||.+........+++|.+... .....+.+..|+..+..++|+|++++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   67 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRY   67 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhh
Confidence            55567789999999999987655555689987532 22334578899999999999999863

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.62  E-value=3.6e-07  Score=47.21  Aligned_cols=60  Identities=22%  Similarity=0.383  Sum_probs=44.7

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-----cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-----RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.+|+|+++.+|.+........+++|.+....     ....+.+..++..+..++|+|+++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   66 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQ   66 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchh
Confidence            455688999999999999886444444888774321     123456888999999999999986

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=98.61  E-value=1.7e-07  Score=48.71  Aligned_cols=60  Identities=20%  Similarity=0.369  Sum_probs=46.2

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|.....+|+|.++.+|.+.......+ ++|.+.... .....+.+|+..+..++|+|++++
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~-aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~   64 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQL   64 (256)
T ss_pred             HeEEeeEecCcccceEEEEEecCCCcE-EEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeE
Confidence            456678899999999999977554444 888875432 234678899999999999999863

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.61  E-value=1.7e-07  Score=52.79  Aligned_cols=57  Identities=18%  Similarity=0.033  Sum_probs=45.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|.....||+|+||.||.+........+++|...      ...+.+|+.++..++|+||+++
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l  225 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLAL  225 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcE
Confidence            46888899999999999999987655555888532      2235689999999999999864

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.61  E-value=4.1e-07  Score=47.69  Aligned_cols=63  Identities=21%  Similarity=0.299  Sum_probs=44.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHH-HHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTL-IFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~-~~~l~h~niv~l   78 (78)
                      ++|+....+|.|+||.||++.....+..+++|.+.... ......+..+... ++.++|+|++++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~   65 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTF   65 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeee
Confidence            36778899999999999999887655566999875432 1222345555554 556689999863

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.61  E-value=2.2e-07  Score=48.81  Aligned_cols=71  Identities=20%  Similarity=0.325  Sum_probs=53.1

Q ss_pred             eehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701            6 FDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .+..++..+.+.|+....+|.|.|+.+|.+........+++|...... .....+..++.++..+ +|+|+++
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~   77 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIAT   77 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEE
Confidence            345555667788999999999999999999886655566888874432 2334577788888877 6999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.61  E-value=4.9e-07  Score=46.87  Aligned_cols=61  Identities=20%  Similarity=0.265  Sum_probs=48.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc-ccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|+..+.+|.|+++.+|.+.....+..+++|.+..... .....+..++..+..+.|+|+++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVK   63 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeee
Confidence            57778999999999999998876555558988754332 34567889999999999999976

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.60  E-value=5.2e-07  Score=47.55  Aligned_cols=62  Identities=16%  Similarity=0.240  Sum_probs=42.5

Q ss_pred             CcccceeeeecCCccEEEEEEc-CCcEEEEEEEccCCc--cccHHHHHHHHHHHHHc---CCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILW-HSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVS---NYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l---~h~niv~l   78 (78)
                      .|.....||+|.||.||.+... .++..+++|.+....  ......+.+|+.++..+   .|+|++++
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~   69 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL   69 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceE
Confidence            5677789999999999999874 344555888874321  22233455666666654   69999863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.60  E-value=3.6e-07  Score=47.30  Aligned_cols=60  Identities=22%  Similarity=0.281  Sum_probs=46.5

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |+..+.+|+|.||.+|.+........+++|.+...  .......+.+++..++.+.|+|+++
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQ   63 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeee
Confidence            56778999999999999887655555589987432  2233457888999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.60  E-value=2.6e-07  Score=48.48  Aligned_cols=60  Identities=22%  Similarity=0.350  Sum_probs=45.5

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.+|.|.++.+|.+.....+..+++|.+....  ......+..|+..+..++|+|+++
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   63 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR   63 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeee
Confidence            566788999999999999887555556888875321  122345778999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.60  E-value=2e-07  Score=48.61  Aligned_cols=61  Identities=18%  Similarity=0.254  Sum_probs=46.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCc---EEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSV---EIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+...+.+|+|.|+.+|.+......   ..+++|.+... .......|..|+.++..+.|+|+++
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~   69 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIH   69 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcce
Confidence            4667789999999999999875322   24588887543 3334567899999999999999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.60  E-value=4.1e-07  Score=47.99  Aligned_cols=63  Identities=19%  Similarity=0.314  Sum_probs=47.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcC-CCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ++|+..+.+|+|.+|.||.+........+++|......  ......+.+|+.++..+. |+|++++
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~   66 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRL   66 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccce
Confidence            35778899999999999999987655566999874321  222356778999999985 6998763

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.60  E-value=4.3e-07  Score=46.94  Aligned_cols=61  Identities=13%  Similarity=0.206  Sum_probs=47.3

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|.....+|+|.++.+|.+........+++|.+...  .......+..|+.+++.++|+|+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   63 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIE   63 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhh
Confidence            366778999999999999887655555688887543  2233567888999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.60  E-value=1.8e-07  Score=50.40  Aligned_cols=65  Identities=17%  Similarity=0.325  Sum_probs=49.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..+.|.....+|+|.++.+|++.....+..+++|.+...  .......+..|+.++..+ +|+|++++
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~   72 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKL   72 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccce
Confidence            456788889999999999999988755555588877432  222345577899999999 99999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=98.60  E-value=2.3e-07  Score=48.34  Aligned_cols=62  Identities=18%  Similarity=0.333  Sum_probs=46.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCc---EEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSV---EIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.+|+|+++.||.+......   ..+++|.+... .....+.+..|+.++..+.|+|+++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   70 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIR   70 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeE
Confidence            46777899999999999999875322   24588887543 2333567889999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.60  E-value=3.9e-07  Score=47.74  Aligned_cols=61  Identities=20%  Similarity=0.293  Sum_probs=46.1

Q ss_pred             CcccceeeeecCCccEEEEEEcC----CcEEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWH----SVEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~----~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .|...+.+|+|.||.||.+....    ....+++|.+...... ....+..|+..+..+.|+|+++
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~   70 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVK   70 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChhe
Confidence            45666889999999999997642    2345589988543322 3567899999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=98.60  E-value=7.4e-08  Score=52.07  Aligned_cols=65  Identities=22%  Similarity=0.343  Sum_probs=46.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCc-cccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGS-RQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +.+.|...+.||.|+||.||.+....     ....+++|.+.... ....+.+..|+.++.++ +|+|++++
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~   76 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNL   76 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhhe
Confidence            44578888999999999999986422     22345899875432 22345677899999998 79999863

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.60  E-value=4.8e-07  Score=47.08  Aligned_cols=61  Identities=23%  Similarity=0.291  Sum_probs=44.2

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc---------cHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ---------GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---------~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |.....+|.|.++.+|.+........+++|.+......         ..+.+..|+.++..++|+|++++
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQY   71 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeE
Confidence            44567899999999999987654455588877432111         12457788899999999999863

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.59  E-value=1.5e-07  Score=56.13  Aligned_cols=61  Identities=28%  Similarity=0.251  Sum_probs=46.5

Q ss_pred             cccceeeeecCCccEEEEEE-cCCc---EEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVIL-WHSV---EIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~-~~~~---~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +....+||+|.||.||+|.+ +.+.   ..|++|.+... ..+...++..|+-.|.+++|+|+++|
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RL  763 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRL  763 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHH
Confidence            34568999999999999865 4332   34588887543 34456789999999999999999875

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.59  E-value=3.3e-07  Score=55.24  Aligned_cols=62  Identities=13%  Similarity=0.075  Sum_probs=44.8

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .....+...+.+|+|+||.||++........+++|.+......    ...+++.+.+++|+||+++
T Consensus       687 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~  748 (968)
T PLN00113        687 DILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKL  748 (968)
T ss_pred             HHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceE
Confidence            3445567778999999999999988654455599987543221    1234778899999999864

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=98.59  E-value=2.7e-07  Score=48.64  Aligned_cols=63  Identities=19%  Similarity=0.298  Sum_probs=47.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|.....+|.|+||.||.+....     ....+++|.+... .......+..|+.++..+.|+|+++
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~   72 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVK   72 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchhe
Confidence            4568888999999999999987632     2344588887543 2233456888999999999999986

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.59  E-value=3.9e-07  Score=48.46  Aligned_cols=62  Identities=18%  Similarity=0.367  Sum_probs=47.8

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +|...+.+|+|.++.+|.+........+++|.+....   ......+.+|+.++..++|+|++++
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~   66 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSM   66 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeee
Confidence            5777899999999999999887655555899875432   2234567788999999999999863

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.59  E-value=2.3e-07  Score=51.06  Aligned_cols=65  Identities=17%  Similarity=0.216  Sum_probs=48.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC----cc-ccHHHHHHHHHHHHHcC-CCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG----SR-QGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~----~~-~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ..+.|.....+|+|.||.|+.+.....+..+|+|.+...    .. ...+...+|+.+++.+. ||||+++
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l   85 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRL   85 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEE
Confidence            456788899999999999999988655455599966442    11 22344567999999998 9999864

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.59  E-value=4.9e-07  Score=46.57  Aligned_cols=60  Identities=18%  Similarity=0.339  Sum_probs=47.1

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--ccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |.....+|+|.++.+|.+........+++|.+.....  .....+..++..+.++.|+|+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVK   63 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccE
Confidence            5667899999999999998765555558998854432  34567889999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=98.58  E-value=4.4e-07  Score=47.01  Aligned_cols=61  Identities=18%  Similarity=0.260  Sum_probs=47.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|.....+|.|.+|.||.+... +..+ ++|.+..... ..+.+..|+.++..+.|+|++++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v-~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~   65 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKV-AVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQL   65 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEE-EEEEeccchh-HHHHHHHHHHHHHhcCCcceeee
Confidence            346778899999999999999864 3444 8998854332 45678899999999999999863

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.58  E-value=4e-07  Score=48.59  Aligned_cols=55  Identities=18%  Similarity=0.200  Sum_probs=41.5

Q ss_pred             eeeeecCCccEEEEEEcC--CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWH--SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+|+|+||.||.+....  ....+++|.+....  ......+|+.++..+.|+|++++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~   63 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISL   63 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcce
Confidence            679999999999998643  33445888875332  23456789999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=98.58  E-value=1.9e-07  Score=48.91  Aligned_cols=62  Identities=24%  Similarity=0.374  Sum_probs=46.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCC-----cEEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHS-----VEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..|...+.+|+|+++.||.+.....     ...+++|.+...... ..+.+.+|+.++..+.|+|+++
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   72 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVK   72 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchh
Confidence            3466778899999999999876432     244588887543332 3467899999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.58  E-value=2.7e-07  Score=48.24  Aligned_cols=63  Identities=21%  Similarity=0.309  Sum_probs=47.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|.....+|.|+||.||.+....     ....+++|.+...... ..+.+..|++++.+++|+|++++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   73 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRL   73 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeee
Confidence            467788899999999999998542     2234488877543322 35678999999999999999863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.58  E-value=5.5e-07  Score=46.62  Aligned_cols=62  Identities=15%  Similarity=0.179  Sum_probs=46.9

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|+..+.+|.|.+|.++..........+++|.+...  .......+.+|+.+++.++|+|++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~   64 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAY   64 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEE
Confidence            366778999999999988877654555588877432  23345668899999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.57  E-value=3.4e-07  Score=47.75  Aligned_cols=63  Identities=17%  Similarity=0.236  Sum_probs=46.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|...+.+|+|.||.||.+....   ....+++|.+... .......+..|+.++..+.|+|++++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   70 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHL   70 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            356778999999999999987642   2224588887532 22334578889999999999999863

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.57  E-value=3.1e-08  Score=55.16  Aligned_cols=63  Identities=16%  Similarity=0.302  Sum_probs=48.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc---cHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ---GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|+..+.+|.|.+|.|-.+.....+..+|+|.++.....   +.-...+|+++|..|+||||+++
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~I  118 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQI  118 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeeh
Confidence            3467788999999999998877554555599998654333   33457789999999999999863

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.57  E-value=4.4e-07  Score=47.19  Aligned_cols=60  Identities=22%  Similarity=0.290  Sum_probs=46.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +.|.....||.|+++.||.+....+..+ ++|.+.... ...+.+.+|+.++..+.|+|+++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~-~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~   65 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKV-AIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVP   65 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceE-EEEEcccCC-ccHHHHHHHHHHHHhCCCCCeee
Confidence            4577778999999999999987665555 888775432 23466888999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=98.57  E-value=2.8e-07  Score=50.10  Aligned_cols=61  Identities=18%  Similarity=0.227  Sum_probs=50.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +++....||+|.-|.||++.++.+..++|+|.+... .....+...+|++++....||+||.
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~  141 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVG  141 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeee
Confidence            456678899999999999999888888899998433 3334567899999999999999986

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.57  E-value=4.6e-07  Score=48.61  Aligned_cols=61  Identities=13%  Similarity=0.218  Sum_probs=47.5

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |.....||.|.++.+|.+.....+..+++|.+....  ....+.+..|+..+..++|+|++++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   64 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGL   64 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhh
Confidence            566788999999999999887545555999875432  3345678899999999999998753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.57  E-value=7.4e-07  Score=45.86  Aligned_cols=60  Identities=22%  Similarity=0.371  Sum_probs=46.8

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.+|+|+++.+|.+........+++|.+....  ....+.+..++..+.++.|+|+++
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVR   63 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEee
Confidence            566788999999999999987545455888875432  234567889999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.57  E-value=6.5e-07  Score=45.90  Aligned_cols=60  Identities=23%  Similarity=0.375  Sum_probs=47.6

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |.....+|.|.++.+|.+........+++|.+..........+.+++..+..+.|+|+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   61 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVK   61 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeE
Confidence            566788999999999999987545555888886544345677889999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.56  E-value=4.3e-07  Score=53.20  Aligned_cols=62  Identities=19%  Similarity=0.347  Sum_probs=48.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|.....||+|.||.||.+........+|+|.+....   ......+..++.++..+.|+||++
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~   68 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVH   68 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCe
Confidence            56888899999999999999987555566999885432   222356778888899999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.56  E-value=6.2e-07  Score=47.09  Aligned_cols=61  Identities=23%  Similarity=0.322  Sum_probs=45.7

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |+..+.+|.|.++.+|++.....+..+++|.+....  ......+..|+..+..++|+|++++
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~   63 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRL   63 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCH
Confidence            345678999999999999886555555899875322  2233567889999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.56  E-value=3.5e-07  Score=47.76  Aligned_cols=60  Identities=27%  Similarity=0.314  Sum_probs=44.1

Q ss_pred             cccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.||+|+++.||.+....   ....+++|.+...  .....+.+.+|+.+++.+.|+|+++
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   65 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIK   65 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcce
Confidence            3455789999999999997642   2344589987543  2233456888999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.56  E-value=4e-07  Score=49.60  Aligned_cols=58  Identities=19%  Similarity=0.129  Sum_probs=45.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+|.....||+|.||.||.+........+++|.....      ....|+.++..++|+|++++
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~  122 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRM  122 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcCh
Confidence            35689999999999999999998765556588864322      23457888999999999874

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=1.9e-07  Score=51.86  Aligned_cols=62  Identities=18%  Similarity=0.374  Sum_probs=50.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..|.....||.|+||.||+|.+......+|+|.++.. .....++..+|+.++..+.++|+.+
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~   75 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITE   75 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHh
Confidence            4466678999999999999998877777799998643 3345677889999999999998854

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.56  E-value=2.9e-07  Score=47.80  Aligned_cols=61  Identities=20%  Similarity=0.272  Sum_probs=47.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|+..+.||.|.++.+|.+........+++|.+.... ......+..|+..+..+.|+|+++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   63 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVG   63 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhh
Confidence            4666788999999999999887555555888875432 233456888999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.56  E-value=3.6e-07  Score=48.90  Aligned_cols=62  Identities=21%  Similarity=0.349  Sum_probs=47.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..|...+.+|+|+|+.+|.+.....+..+++|.+...   .......+..|+..+..++|+|+++
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   89 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIE   89 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEE
Confidence            4477788999999999999987655555589887532   1223356888999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.56  E-value=7.5e-07  Score=46.36  Aligned_cols=59  Identities=24%  Similarity=0.362  Sum_probs=43.9

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc------cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS------RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |.....+|.|.|+.||.+....+..+ ++|.+....      ......+.+|+..+..++|+|+++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~-avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   66 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLI-AVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ   66 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeE-EEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEee
Confidence            55668899999999999987655545 888774321      112345788999999999999975

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=98.56  E-value=5.4e-07  Score=47.57  Aligned_cols=61  Identities=26%  Similarity=0.377  Sum_probs=44.3

Q ss_pred             cccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |.....+|+|+||.||++....     +...+++|.+... .......+..|+..+..+.|+||+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   68 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKL   68 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeE
Confidence            5667889999999999987532     2234477776432 22334678889999999999999863

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.56  E-value=2.1e-07  Score=49.33  Aligned_cols=61  Identities=26%  Similarity=0.264  Sum_probs=46.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+.....||+|+|+.||.+........+++|.+........+.+..|+..+..++|+|+++
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~   83 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVD   83 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHH
Confidence            3444577999999999999876545555999875544444566889999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.55  E-value=2.7e-07  Score=48.72  Aligned_cols=62  Identities=19%  Similarity=0.292  Sum_probs=46.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--ccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.+|.|.++.||.+........+++|.+.....  .....+.+|+.++..++|+|+++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~   68 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVT   68 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEE
Confidence            467788999999999999998875555558888753321  12234677889999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=98.55  E-value=4.9e-07  Score=47.75  Aligned_cols=63  Identities=24%  Similarity=0.223  Sum_probs=46.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCC----------------cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHS----------------VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~----------------~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...|.....+|+|+||.||.+.....                ...+++|.+... .....+.+..|++++..++|+|+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            34677889999999999998875421                133588877543 2334567889999999999999976

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=98.55  E-value=3.8e-07  Score=48.99  Aligned_cols=56  Identities=23%  Similarity=0.239  Sum_probs=42.1

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||+|+||.||.+.....+..+++|.+...   .......+..++.++..+.|+|++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~   60 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL   60 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCce
Confidence            589999999999987655556699988532   12234556788888999999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.55  E-value=4.1e-07  Score=49.22  Aligned_cols=64  Identities=17%  Similarity=0.258  Sum_probs=49.7

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..++|.....||.|.++.+|.+........+++|.+...  .......+..|+.++..+.|+|+++
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   78 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIG   78 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHH
Confidence            456788899999999999999988765556699987532  2223455778999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=98.55  E-value=2.8e-07  Score=48.79  Aligned_cols=63  Identities=19%  Similarity=0.279  Sum_probs=46.1

Q ss_pred             hcCcccceeeeecCCccEEEEEEc----------------CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILW----------------HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~----------------~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|+..+.+|+|+||.||.+...                .....+++|.+... .......+..|+.++..++|+|+++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            356888899999999999987432                12234588887543 2233467889999999999999975

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=98.55  E-value=3.7e-07  Score=47.93  Aligned_cols=62  Identities=24%  Similarity=0.302  Sum_probs=46.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCc-----EEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSV-----EIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~-----~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.||+|++|.||.+......     ..+++|.+.... ......+.+|+..+..++|+|+++
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   72 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC   72 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccce
Confidence            35777789999999999999764322     344888775332 223456889999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.54  E-value=2.3e-07  Score=48.82  Aligned_cols=62  Identities=21%  Similarity=0.390  Sum_probs=46.3

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcC-CCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      +|.....+|+|+||.||.+.....+..+++|.+.... ......+..|+..+.++. |+|++++
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~   68 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKF   68 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            4555678999999999999887655566999875432 233456788888888885 9999863

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.54  E-value=2.2e-07  Score=51.94  Aligned_cols=60  Identities=18%  Similarity=0.235  Sum_probs=46.1

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHH--HcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIF--VSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~--~l~h~niv~   77 (78)
                      .+..+....+.||+|.||.||+|.+++ ..+ |+|.+...   +...|-+|.++..  .++|.||..
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~wrG-e~V-AVKiF~sr---dE~SWfrEtEIYqTvmLRHENILg  269 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRWRG-EDV-AVKIFSSR---DERSWFRETEIYQTVMLRHENILG  269 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccccC-Cce-EEEEeccc---chhhhhhHHHHHHHHHhccchhhh
Confidence            455677889999999999999998853 445 99988543   3456778887766  468999974

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.54  E-value=4e-07  Score=47.38  Aligned_cols=64  Identities=23%  Similarity=0.295  Sum_probs=50.0

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .++++|.....+|.|.++.+|.+........+++|.+..... ..+.+..|+.++.++ .|+|+++
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~   67 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIAT   67 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChhe
Confidence            456789999999999999999998865555558888754322 345688899999988 6999976

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.54  E-value=8.4e-07  Score=45.92  Aligned_cols=61  Identities=18%  Similarity=0.210  Sum_probs=46.8

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|...+.+|.|.++.+|.+........+++|.+...  .....+.+..++..++.++|+|+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVA   63 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            467778999999999999987655555588887432  2233456788889999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.54  E-value=4.4e-07  Score=47.62  Aligned_cols=61  Identities=20%  Similarity=0.431  Sum_probs=47.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .|+....+|.|.++.+|.+........+++|.+... .......+..++.++..+.|+|+++
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   66 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK   66 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEee
Confidence            456668899999999999987655555589887533 2234567888999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=98.54  E-value=4.2e-07  Score=47.97  Aligned_cols=65  Identities=18%  Similarity=0.285  Sum_probs=47.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.+|.|.||.||.+....     ....+++|.+.... ......+..++.++..++|+|++++
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   74 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRL   74 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            44568888999999999999986532     12345888775332 2234467889999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.53  E-value=3.8e-07  Score=47.63  Aligned_cols=60  Identities=17%  Similarity=0.288  Sum_probs=43.1

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc---c-------cHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---Q-------GMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~-------~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.+|.|+++.||.+........+++|.+.....   .       ..+.+..|+..+..++|+|+++
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   72 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQ   72 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcce
Confidence            4456889999999999998765444558887642110   0       1235677888999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=98.53  E-value=3.8e-07  Score=47.70  Aligned_cols=64  Identities=20%  Similarity=0.310  Sum_probs=47.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCC-----cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHS-----VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|.....+|.|+||.||.+.....     ...+++|.+... .......+..++.++..+.|+|++++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~   74 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRL   74 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEE
Confidence            45677889999999999999876432     244588887533 22334568889999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=98.53  E-value=6e-07  Score=47.81  Aligned_cols=62  Identities=18%  Similarity=0.319  Sum_probs=44.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCc--EEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSV--EIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~--~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      ++|+..+.+|+|+||.||.+......  ..+++|.+... .......+.+|+.++.++ +|+|+++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~   72 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN   72 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcce
Confidence            46777899999999999999875322  23366665432 222345678899999998 8999986

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.53  E-value=1.4e-07  Score=50.38  Aligned_cols=64  Identities=27%  Similarity=0.339  Sum_probs=53.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+|+....+|.|+||.|...+...++..+|+|.+...   ..++.+...+|..++....||.+++|
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l  109 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKL  109 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEE
Confidence            35688889999999999999999888888899998543   34456677889999999999998864

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.53  E-value=7e-07  Score=51.95  Aligned_cols=64  Identities=30%  Similarity=0.421  Sum_probs=51.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .++|....++|+|+||.|+.+........||+|.+...   ...+.+....|.+++... +||-+++|
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L  434 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNL  434 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeec
Confidence            46788999999999999999999887788899999654   334456677787877766 59988764

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.53  E-value=3.3e-07  Score=49.21  Aligned_cols=58  Identities=16%  Similarity=0.139  Sum_probs=42.9

Q ss_pred             ceeeeec--CCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           21 YNKLGEG--RFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        21 ~~~ig~g--~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+||+|  +|+.||.+.....+..+++|.+....  ......+..|+.+++.++|+||+++
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~   64 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPY   64 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeE
Confidence            4678998  67889999887666666999885432  2223456678889999999999863

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=98.53  E-value=3.4e-07  Score=48.21  Aligned_cols=54  Identities=24%  Similarity=0.374  Sum_probs=40.4

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHHHHHcCCCcccc
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ||+|+||.||.+.....+..+++|.+.....   ...+.+..|+.++..++|+|+++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~   57 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVS   57 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEee
Confidence            5899999999998875555559998743211   12345678899999999999985

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=98.52  E-value=4.5e-07  Score=48.71  Aligned_cols=61  Identities=28%  Similarity=0.426  Sum_probs=42.3

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHH---HHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLI---FVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~---~~l~h~niv~l   78 (78)
                      |...+.||+|.+|.||.+........+++|.+...   .....+.+..+.+++   ..+.|+|++++
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~   67 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNL   67 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhce
Confidence            44568899999999999988765556699988532   122234566665554   45679999863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.52  E-value=8.7e-07  Score=45.87  Aligned_cols=59  Identities=17%  Similarity=0.378  Sum_probs=45.8

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|.....+|+|++|.+|.+....+... ++|.+.... .....+..|+..+..+.|+|+++
T Consensus         5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~-~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd05112           5 ELTLVQEIGSGQFGLVWLGYWLEKRKV-AIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQ   63 (256)
T ss_pred             HeEEEeeecCcccceEEEEEEeCCCeE-EEEECCCCC-CCHHHHHHHHHHHHhCCCCCeee
Confidence            566678999999999999977655554 888775332 23456889999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.51  E-value=7.2e-07  Score=47.10  Aligned_cols=61  Identities=23%  Similarity=0.211  Sum_probs=46.4

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+.....||.|.++.+|.+........+++|.+........+.+.+|+.++..++|+|+++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~   80 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVE   80 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChhe
Confidence            4555689999999999999876544455888775443334556788999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=98.51  E-value=6.1e-07  Score=46.46  Aligned_cols=55  Identities=24%  Similarity=0.271  Sum_probs=42.6

Q ss_pred             eeeecCCccEEEEEEcC-Cc--EEEEEEEccCCcc-ccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWH-SV--EIKSVKRLSKGSR-QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~-~~--~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|+|++|.||++.+.. ..  ..+++|.+..... ...+.+..|+..+..++|+|+++
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   60 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR   60 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccc
Confidence            57999999999998643 22  2358898865443 45667899999999999999986

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.51  E-value=5.1e-07  Score=47.90  Aligned_cols=58  Identities=28%  Similarity=0.302  Sum_probs=44.7

Q ss_pred             ceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           21 YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        21 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+|+|++|.+|.+.....+..+++|.+..........+..|+..++.+.|+|++++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   82 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM   82 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhhe
Confidence            4679999999999998865555558888754333345568889999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.51  E-value=1.1e-06  Score=45.22  Aligned_cols=61  Identities=21%  Similarity=0.339  Sum_probs=47.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|...+.+|.|+++.+|.+........+++|.+....  ......+..|++.+..++|+|+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   63 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIK   63 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhh
Confidence            3566788999999999999887545555888875432  234566888999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.51  E-value=1.8e-07  Score=49.10  Aligned_cols=56  Identities=18%  Similarity=0.097  Sum_probs=39.3

Q ss_pred             eeeecCCccEEEEEEcC------------------------CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWH------------------------SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~------------------------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||+|+||.||.|....                        ....+++|.+..........+.+++.++..+.|+|++++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            58999999999986421                        112246777654333334568888889999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=98.51  E-value=6.9e-07  Score=46.90  Aligned_cols=62  Identities=19%  Similarity=0.298  Sum_probs=46.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCC----cEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHS----VEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~----~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..|...+.||+|+||.+|++.....    ...+++|...... ......+.+|+..+..+.|+|+++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   73 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVR   73 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            4567778999999999999976432    1234888775432 233467889999999999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=98.50  E-value=5.2e-07  Score=47.44  Aligned_cols=62  Identities=23%  Similarity=0.349  Sum_probs=46.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++.....+|+|+||.||.+....     ....+++|.+..........+..++.++..+.|+|+++
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   71 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR   71 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCce
Confidence            356667899999999999886421     23344788776555555677999999999999999976

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.50  E-value=5.4e-07  Score=47.43  Aligned_cols=64  Identities=19%  Similarity=0.289  Sum_probs=50.4

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...++|.....+++|.++.+|.+........+++|.+..... ....+..|+..+..++|+|+++
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~   79 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVD   79 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeE
Confidence            466778888999999999999998874444458888754332 4566888999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=98.50  E-value=5.3e-07  Score=46.79  Aligned_cols=59  Identities=17%  Similarity=0.351  Sum_probs=45.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|...+.+|+|.++.||.+........ ++|.+.... .....+..|+.++..+.|+|+++
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~-~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWRGKIDV-AIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQ   63 (256)
T ss_pred             HcchhhhhccCCCceEEEeEecCCccE-EEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEE
Confidence            466678899999999999987654444 888875322 23456888999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=98.50  E-value=3.4e-07  Score=48.44  Aligned_cols=62  Identities=19%  Similarity=0.268  Sum_probs=45.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcC--------------CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH--------------SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~--------------~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +.|...+.||+|+||.||.+....              ....+++|.+... .......+.+|+.++..++|+|+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~   81 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIR   81 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCe
Confidence            457778899999999999876532              1223588887543 2233456889999999999999976

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.49  E-value=9e-10  Score=57.47  Aligned_cols=64  Identities=17%  Similarity=0.251  Sum_probs=49.1

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|+..++||+|.|+.|+++.....+.-+++|.++..  +....+++.+|+++...|.||||++|
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL   75 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL   75 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeeh
Confidence            45778889999999999998876544443477776432  33356788899999999999999975

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=98.49  E-value=7.7e-07  Score=47.98  Aligned_cols=57  Identities=19%  Similarity=0.306  Sum_probs=42.1

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +.||+|+||.||.+........+|+|.+...   .......+..|..++..+ +|+||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~   61 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGL   61 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCce
Confidence            3689999999999988766666699988542   122334577788888887 69999863

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.48  E-value=8.7e-07  Score=47.16  Aligned_cols=63  Identities=22%  Similarity=0.299  Sum_probs=44.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCc----EEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSV----EIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~----~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|...+.||+|+||.||.+......    ..+++|.+.... ......+..++.++..+.|+|++++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~   74 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL   74 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccE
Confidence            45667788999999999999764322    134777764332 2223467889999999999999863

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.47  E-value=9.4e-07  Score=46.16  Aligned_cols=61  Identities=20%  Similarity=0.186  Sum_probs=46.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcC-CCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSN-YRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~-h~niv~   77 (78)
                      +|.....+|.|+++.+|.+........+++|.+...   .......+..+..++..+. |+|+++
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~   66 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIK   66 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchh
Confidence            577788999999999999988755556688887432   2222355778888888998 999985

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.47  E-value=1.3e-06  Score=47.12  Aligned_cols=62  Identities=15%  Similarity=0.212  Sum_probs=45.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCC--cEEEEEEEccCC--ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHS--VEIKSVKRLSKG--SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~--~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +|.....||+|.|+.||.+.....  ...+++|.+...  .....+.+..|+.++..+ .|+|++++
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~   67 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCL   67 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChhee
Confidence            356678899999999999988654  555699987532  112245677888888888 59999863

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=98.47  E-value=7.3e-07  Score=47.77  Aligned_cols=57  Identities=23%  Similarity=0.334  Sum_probs=41.0

Q ss_pred             eeeeecCCccEEEEEEc---CCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILW---HSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.||+|+||.||.+...   ..+..+++|.+....  ......+..|+.++..++|+||+++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   63 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKL   63 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccE
Confidence            56899999999987652   334455999875321  2233456778899999999999863

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.47  E-value=1.8e-07  Score=49.00  Aligned_cols=63  Identities=22%  Similarity=0.193  Sum_probs=52.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|.....+|.|+|+.|+.+..-.....||+|.+.+....+.+...+|++..+++.|+|++++
T Consensus        21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l   83 (302)
T KOG2345|consen   21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRL   83 (302)
T ss_pred             ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHH
Confidence            457888999999999999887555556679999877666667788999999999999999763

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=98.47  E-value=1e-06  Score=46.94  Aligned_cols=65  Identities=25%  Similarity=0.326  Sum_probs=47.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|...+.+|.|+||.||.+...     .....+++|.+... .....+.+..|+.++.++ +|+|++++
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  104 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNL  104 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceE
Confidence            3456888899999999999988642     12234488877543 223345688999999999 79999863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.46  E-value=1.4e-06  Score=46.63  Aligned_cols=60  Identities=23%  Similarity=0.410  Sum_probs=45.3

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |.....+|+|.+|.+|.+.....+..+++|.+...   .......+..|+.++..++|+|+++
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   85 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIE   85 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCcc
Confidence            45557799999999999987655556688887432   1223356788999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=98.46  E-value=6.6e-07  Score=47.08  Aligned_cols=54  Identities=24%  Similarity=0.354  Sum_probs=39.7

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCcccc
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ||+|+||.||.+.....+..+++|.+....   .........|+.++..++|+|+++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~   57 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVN   57 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEE
Confidence            589999999999887656666999874321   112234556888999999999986

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=98.46  E-value=1e-06  Score=46.71  Aligned_cols=63  Identities=16%  Similarity=0.304  Sum_probs=45.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCc--EEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSV--EIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~--~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ++|.....||+|+||.||.+......  ..+++|.+... .....+.+..|+..+.++ +|+|++++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   68 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINL   68 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhhe
Confidence            46777899999999999999875432  22367766432 223346688899999888 79999863

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=98.45  E-value=1.3e-06  Score=47.17  Aligned_cols=57  Identities=19%  Similarity=0.294  Sum_probs=41.2

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +.||+|+||.||.+........+++|.+...   .......+..|+.++..+ +|+|++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~   61 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL   61 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCce
Confidence            3689999999999998766666699988542   222334566777777666 79999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=98.45  E-value=6.4e-07  Score=47.07  Aligned_cols=60  Identities=27%  Similarity=0.332  Sum_probs=44.1

Q ss_pred             cccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCcc-ccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGSR-QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |...+.+|.|+||.||.+....     ....+++|.+..... .....+..|+.++..+.|+|+++
T Consensus         7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~   72 (283)
T cd05091           7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVC   72 (283)
T ss_pred             HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCe
Confidence            5556789999999999997643     234458998854322 22456888889999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.44  E-value=8.4e-07  Score=45.92  Aligned_cols=55  Identities=22%  Similarity=0.305  Sum_probs=40.2

Q ss_pred             eeeecCCccEEEEEEcCCc----------EEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSV----------EIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~----------~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||+|+|+.||++......          ..+++|.+...... ...+.+++..+..++|+|++++
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~   66 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKL   66 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhhe
Confidence            5899999999999876433          22366665433222 5678899999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=98.44  E-value=1.1e-06  Score=45.63  Aligned_cols=55  Identities=24%  Similarity=0.337  Sum_probs=41.4

Q ss_pred             eeeecCCccEEEEEEcCCc---EEEEEEEccCCcc-ccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWHSV---EIKSVKRLSKGSR-QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~---~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .||+|+||.||++......   ..+++|.+..... ...+.+..|+..+..+.|+|+++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   60 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR   60 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeee
Confidence            5899999999998764322   4458888754332 23457889999999999999986

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.44  E-value=1.6e-06  Score=46.25  Aligned_cols=54  Identities=19%  Similarity=0.200  Sum_probs=40.7

Q ss_pred             eeeeecCCccEEEEEEcC--CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           22 NKLGEGRFGPVYKVILWH--SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+|+|+||.||++....  ....+++|.+....  ....+.+|+.++..+.|+|+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~   62 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIA   62 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeee
Confidence            579999999999998643  22445888775332  2345778999999999999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.44  E-value=1.6e-06  Score=45.43  Aligned_cols=61  Identities=15%  Similarity=0.278  Sum_probs=45.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcC---CCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSN---YRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~---h~niv~   77 (78)
                      .|+..+.+|.|.++.+|.+........+++|.+... .......+..|+.++..+.   |+|+++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~   66 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITK   66 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeee
Confidence            356668899999999999998655555699987532 2334456778888888886   999875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.44  E-value=1.5e-06  Score=44.83  Aligned_cols=61  Identities=28%  Similarity=0.483  Sum_probs=46.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|...+.+|.|.++.+|.+.....+..+++|.+...  .......+..++.+++.++|+|+++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIIS   63 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchh
Confidence            366678899999999999887655555588887532  2233456778899999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.43  E-value=1.3e-06  Score=46.03  Aligned_cols=61  Identities=23%  Similarity=0.272  Sum_probs=45.6

Q ss_pred             CcccceeeeecCCccEEEEEEc----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILW----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .|.....+|+|+||.||.+...    .....+++|.+... .......+.+|+.+++.+.|+|+++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   70 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK   70 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeee
Confidence            4567788999999999998642    23344589987543 2333467889999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PRK10345 hypothetical protein; Provisional

Probab=98.43  E-value=1.2e-06  Score=44.92  Aligned_cols=58  Identities=17%  Similarity=0.241  Sum_probs=41.9

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-----CCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-----NYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-----~h~niv~l   78 (78)
                      +.....||+|+++.||.  ++..... ++|..........+.+.+|+..+..+     .|+||+++
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~   66 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRY   66 (210)
T ss_pred             cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCccccee
Confidence            34568899999999995  5444444 67776544333456789999999998     57998863

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=98.42  E-value=1.4e-06  Score=46.81  Aligned_cols=57  Identities=21%  Similarity=0.363  Sum_probs=41.3

Q ss_pred             eeeeecCCccEEEEEEc---CCcEEEEEEEccCC----ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILW---HSVEIKSVKRLSKG----SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.||+|+||.||.+...   .....+++|.+...    .......+..|+.++..+.|+||+++
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~   65 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDL   65 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhce
Confidence            57899999999998753   23445599987532    11223456788999999999999863

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.42  E-value=1.1e-06  Score=47.30  Aligned_cols=59  Identities=17%  Similarity=0.149  Sum_probs=42.9

Q ss_pred             cceeeeecCCccEEEEEEcCCcEEEEEEEccCCcccc--------------HHHHHHHHHHHHHcCCCccccC
Q 043701           20 SYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQG--------------MEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        20 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--------------~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....||.|.++.||.+........+++|.+.......              ...+.+|+.++..+.|+|++++
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   85 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL   85 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence            4577999999999999877555555888874321111              1246789999999999999863

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=98.42  E-value=1.7e-06  Score=45.03  Aligned_cols=54  Identities=20%  Similarity=0.289  Sum_probs=40.3

Q ss_pred             eeecCCccEEEEEEc--CCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           24 LGEGRFGPVYKVILW--HSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ||.|+||.||.+...  .....+++|.+.... ....+.+.+|+.++..++|+|+++
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~   59 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVR   59 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEE
Confidence            799999999998764  333344888875432 223456889999999999999986

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>PTZ00284 protein kinase; Provisional

Probab=98.42  E-value=1.6e-06  Score=48.88  Aligned_cols=61  Identities=23%  Similarity=0.212  Sum_probs=43.2

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRL   74 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~n   74 (78)
                      ...+.|...+.||+|+||.||.+........+|+|.+.... ........|+.++..+.|.+
T Consensus       126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~  186 (467)
T PTZ00284        126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQAD  186 (467)
T ss_pred             cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcC
Confidence            34577889999999999999999887666666999885322 12334555666666665544

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.42  E-value=1.5e-06  Score=45.40  Aligned_cols=56  Identities=21%  Similarity=0.149  Sum_probs=40.6

Q ss_pred             eeeecCCccEEEEEEcC--CcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWH--SVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||+|+||.||.+....  ....+++|.+.... ......+.+|+.++..++|+|++++
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   60 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQC   60 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            58999999999997542  22334888775432 2233468889999999999999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=98.42  E-value=1.2e-06  Score=46.97  Aligned_cols=57  Identities=21%  Similarity=0.267  Sum_probs=39.3

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHH-HHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVT-LIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~-~~~~l~h~niv~l   78 (78)
                      +.||+|+||.||.+........+++|.+....   ......+..+.. ++..++|+|++++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~   61 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGL   61 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccce
Confidence            36899999999999987655666999875321   112233444543 5677899999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=98.41  E-value=1.3e-06  Score=46.11  Aligned_cols=65  Identities=22%  Similarity=0.335  Sum_probs=47.7

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      ...++|.....+|+|.+|.||.+....     ....+++|.+... .......+..|+.++..+ .|+|+++
T Consensus         9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~   80 (293)
T cd05053           9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN   80 (293)
T ss_pred             cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence            445668888999999999999987642     2245588887542 223345688899999888 7999975

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=98.41  E-value=1.1e-06  Score=45.91  Aligned_cols=56  Identities=16%  Similarity=0.136  Sum_probs=40.0

Q ss_pred             eeeecCCccEEEEEEcCC------------cEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHS------------VEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~------------~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|.|.||.||.+.....            ...+++|.+..........+.+++.++..+.|+|++++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~   69 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLL   69 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeE
Confidence            579999999999974311            12237777654434445578888889999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.41  E-value=1.4e-06  Score=45.77  Aligned_cols=62  Identities=23%  Similarity=0.302  Sum_probs=45.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcC-CcE---EEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH-SVE---IKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~---~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|...+.||.|+||.||++.... +..   .+++|.+... .......+..++..+..+.|+|+++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   73 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCR   73 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCce
Confidence            457778999999999999997543 221   2488887533 2233456788888899999999875

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.41  E-value=4.4e-07  Score=51.62  Aligned_cols=62  Identities=19%  Similarity=0.312  Sum_probs=50.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..|..-..||+|..|.||.+........+|+|.+........+-..+|+.+|+.++|+|||.
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVn  334 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVN  334 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHH
Confidence            44666788999999999999877666667999986655555677889999999999999985

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.41  E-value=1.9e-06  Score=45.18  Aligned_cols=60  Identities=22%  Similarity=0.244  Sum_probs=43.4

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcC-CCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSN-YRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~-h~niv~   77 (78)
                      |.....||.|+++.||++........+++|.+.... ........+++..+.++. |+|+++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~   62 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVK   62 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchh
Confidence            345678999999999999987655555898874321 122234556888888998 999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.41  E-value=1.1e-08  Score=59.67  Aligned_cols=63  Identities=21%  Similarity=0.433  Sum_probs=51.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +-+.+...+|.|.||.||++.......+.|.|.+........++|.-|+.++..+.||++|+|
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkL   94 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKL   94 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHH
Confidence            345566778999999999998776666657888876666678899999999999999999874

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=98.41  E-value=1.2e-06  Score=46.36  Aligned_cols=62  Identities=19%  Similarity=0.322  Sum_probs=46.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|.....+|+|+++.+|.+....     ....+++|.+........+.+.+|+..+..+.|+|+++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   71 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK   71 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcce
Confidence            356777899999999999987432     23334777775444444567889999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.40  E-value=1.8e-06  Score=44.88  Aligned_cols=55  Identities=24%  Similarity=0.254  Sum_probs=40.8

Q ss_pred             eeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .||+|+||.||.+....   ....+++|.+... .......+..|+.+++.++|+|+++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~   60 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLS   60 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcce
Confidence            58999999999987532   2334588887432 2334567888999999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=98.39  E-value=2.2e-06  Score=46.09  Aligned_cols=60  Identities=23%  Similarity=0.243  Sum_probs=43.8

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCc-cc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRL-LL   76 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~n-iv   76 (78)
                      +|...+.||+|+||.||.+........+|+|.+...   .....+.+..|.+++..+.|++ ++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~   64 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLT   64 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCcee
Confidence            466778999999999999988766556699987532   2223456777888888887654 54

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=98.39  E-value=1.5e-06  Score=46.64  Aligned_cols=57  Identities=26%  Similarity=0.342  Sum_probs=41.1

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +.||.|+||.||.+........+|+|.+...   .......+..+..++..+ .|+|++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~   61 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQL   61 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccce
Confidence            3689999999999988765555699988532   122344566777777777 69999864

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.39  E-value=1.7e-06  Score=44.67  Aligned_cols=54  Identities=24%  Similarity=0.356  Sum_probs=41.9

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCCcc-ccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|+|++|.+|.+....+..+ ++|.+..... .....+..++.++..+.|+|+++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v-~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   56 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEV-AVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVK   56 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcE-EEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEE
Confidence            589999999999987664444 8998754322 24567889999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.39  E-value=1.6e-06  Score=46.26  Aligned_cols=62  Identities=23%  Similarity=0.360  Sum_probs=46.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..|.....+|.|.+|.+|.+.....+..+++|.+...   .......+..|+..+..++|+|+++
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   79 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ   79 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCccc
Confidence            4466678899999999999988655555588877432   2223456778999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.38  E-value=2.3e-07  Score=53.20  Aligned_cols=66  Identities=20%  Similarity=0.177  Sum_probs=49.7

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc--cHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ--GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.+-|...+.+|+|.|..|-.+++-..+..+|+|.+......  ....+.+|+++|+-..|||||+|
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRL   82 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRL   82 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeee
Confidence            3455678889999999998877765444444599999654332  34568899999999999999985

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.37  E-value=3.9e-06  Score=43.98  Aligned_cols=59  Identities=24%  Similarity=0.272  Sum_probs=44.7

Q ss_pred             ccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--ccHHHHHHHHHHHHHcCCCcccc
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .....+|.|.++.+|++.....+..+++|.+.....  .....+..|+..+..++|+|+++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   62 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIK   62 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcch
Confidence            445789999999999998875555558888754322  23456778889999999999876

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=98.37  E-value=2.4e-06  Score=44.11  Aligned_cols=57  Identities=26%  Similarity=0.356  Sum_probs=43.2

Q ss_pred             eeeeecCCccEEEEEEcCC---cEEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHS---VEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.||.|+||.||.+.....   ...+++|.+...... ..+.+..++..+..++|+|++++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~   61 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRL   61 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChhee
Confidence            3589999999999987643   444588888544322 35678899999999999999863

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=98.37  E-value=2e-06  Score=46.24  Aligned_cols=56  Identities=25%  Similarity=0.334  Sum_probs=39.4

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHH-cCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFV-SNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~-l~h~niv~l   78 (78)
                      .||+|+||.||.+........+|+|.+....   .........+..++.. ++|+|++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~   61 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHL   61 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcce
Confidence            5899999999999987665566999885421   1223445566666665 489999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=98.37  E-value=2.2e-06  Score=44.78  Aligned_cols=56  Identities=23%  Similarity=0.150  Sum_probs=39.6

Q ss_pred             eeeecCCccEEEEEEcC--CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWH--SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||+|+||.||.+....  ....+++|.+... .......+.+|+..++.+.|+|++++
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~   60 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC   60 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceE
Confidence            48999999999986532  2234477766432 22234567889999999999999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.36  E-value=2.1e-07  Score=48.39  Aligned_cols=56  Identities=21%  Similarity=0.227  Sum_probs=39.1

Q ss_pred             eeeecCCccEEEEEEcCCc-------EEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSV-------EIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||.|+|+.||++......       ..+++|.+........+.+..++.++..+.|+|++++
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~   64 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLN   64 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhhe
Confidence            5899999999998764211       1235565543333345668888899999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.36  E-value=1.9e-06  Score=44.60  Aligned_cols=54  Identities=13%  Similarity=0.282  Sum_probs=41.1

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHHHHHcCCCcccc
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|.|.++.+|.+.....+..+++|.+.....   .....+..++.++..+.|+|+++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~   57 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVK   57 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhH
Confidence            5789999999999876455559998754322   33456788889999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=98.36  E-value=1.7e-06  Score=45.56  Aligned_cols=63  Identities=21%  Similarity=0.312  Sum_probs=43.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcE----EEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVE----IKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|...+.||.|+|+.||.+.......    .+++|...... ......+..++..+..+.|+|++++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~   74 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL   74 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceE
Confidence            356777899999999999998643221    23667664322 1223456677777888999999863

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=98.36  E-value=2e-06  Score=46.23  Aligned_cols=56  Identities=23%  Similarity=0.331  Sum_probs=40.2

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .||+|+||.||.+........+++|.+...   .......+..|.+++..+ +|+|++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~   61 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTAL   61 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccce
Confidence            589999999999988765555699987532   122334566777777765 79998763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.36  E-value=1e-07  Score=54.68  Aligned_cols=61  Identities=21%  Similarity=0.219  Sum_probs=45.4

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEcc--C--CccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLS--K--GSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~--~--~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .....++|+|.|.+||++.+...+.-+|.-.+.  .  ......+.|..|+.+++.|.|+||+++
T Consensus        42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirf  106 (632)
T KOG0584|consen   42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRF  106 (632)
T ss_pred             eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeee
Confidence            355689999999999999986544433543331  1  233456889999999999999999974

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=98.35  E-value=2.3e-06  Score=46.04  Aligned_cols=56  Identities=29%  Similarity=0.358  Sum_probs=40.5

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .||+|+||.||.+........+|+|.+...   .......+..+..++..+ .|+|++++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~   61 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL   61 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhce
Confidence            689999999999988765556699987532   122344566777777765 69999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.35  E-value=6.1e-06  Score=41.73  Aligned_cols=60  Identities=28%  Similarity=0.338  Sum_probs=46.1

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |.....++.|.++.+|.+........+++|.+...... ..+.+..++..+..+.|+|+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~   61 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVK   61 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhh
Confidence            34567899999999999988763444489988654333 4667888999999999999875

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=98.34  E-value=2.3e-07  Score=50.17  Aligned_cols=63  Identities=16%  Similarity=0.267  Sum_probs=46.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCC----cEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHS----VEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~----~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|+....||+|.+|.||++....+    ...+|+|.+...  ...-...-.+|+.+++.++|+|++.|
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~L   92 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISL   92 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhH
Confidence            4578888999999999999965432    224588877543  22334567899999999999999864

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=98.34  E-value=2.8e-06  Score=44.15  Aligned_cols=55  Identities=25%  Similarity=0.319  Sum_probs=40.9

Q ss_pred             eeeecCCccEEEEEEc--CCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILW--HSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|+|.||.||.+...  .....+++|.+...  .....+.+..|+.++..+.|+|+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   60 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVR   60 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcce
Confidence            4799999999998653  33445589987533  2223467888999999999999985

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=98.34  E-value=2.1e-06  Score=46.16  Aligned_cols=56  Identities=23%  Similarity=0.266  Sum_probs=38.3

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHH-HHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVT-LIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~-~~~~l~h~niv~l   78 (78)
                      .||.|+||.||.+.....+..+++|.+...   .......+..+.. ++..++|+|++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~   61 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGL   61 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccE
Confidence            589999999999988655555699987432   1122334445544 4667899999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.34  E-value=4.4e-06  Score=43.81  Aligned_cols=61  Identities=18%  Similarity=0.211  Sum_probs=42.1

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      |...+.+|+|.++.+|++........+++|.+... ..........|+..+.++. |+|++++
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~   63 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRL   63 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccce
Confidence            34567899999999999987655555589887432 1122233456777788774 9999863

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.34  E-value=5e-06  Score=44.10  Aligned_cols=65  Identities=14%  Similarity=0.383  Sum_probs=46.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|.....+|+|.++.+|.+.....+..+++|.+.... ......+..++..+... .|+|++++
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~   79 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKC   79 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhh
Confidence            3466888899999999999999987655566999885432 22334456677666666 49998763

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=98.33  E-value=2.9e-06  Score=45.59  Aligned_cols=56  Identities=27%  Similarity=0.320  Sum_probs=38.3

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHH-cCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFV-SNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~-l~h~niv~l   78 (78)
                      .||+|+||.||.+........+|+|.+...   .....+....+..++.. ..|+|++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~   61 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHL   61 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccce
Confidence            689999999999988766656699987532   11223344555555554 479999863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=98.33  E-value=2.6e-06  Score=45.82  Aligned_cols=57  Identities=21%  Similarity=0.276  Sum_probs=38.8

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHH-HHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVT-LIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~-~~~~l~h~niv~l   78 (78)
                      +.||+|+||.||.+.....+..+++|.+....   ......+..+.. ++..++|+|++++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~   61 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGL   61 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCe
Confidence            36899999999999987655566999885321   112233444443 4567899999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=98.33  E-value=2.5e-06  Score=45.66  Aligned_cols=66  Identities=21%  Similarity=0.349  Sum_probs=47.0

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEc-------CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILW-------HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ...+.|...+.+|+|.+|.||.+...       .....+++|.+... .......+..|+.++..+ .|+|++++
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~   83 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINL   83 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeE
Confidence            34456778899999999999998642       12334588877532 223345688899999988 69999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.33  E-value=8.1e-07  Score=49.58  Aligned_cols=63  Identities=16%  Similarity=0.222  Sum_probs=47.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|...+.+|.|+||.++..+.......+++|.+...  .......-.+|+.++.++.|||||.
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~   67 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVE   67 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeee
Confidence            35677789999999999988776644445588988543  3334456788999999999999984

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.33  E-value=2.8e-06  Score=44.49  Aligned_cols=59  Identities=24%  Similarity=0.290  Sum_probs=44.8

Q ss_pred             ccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +....+|.|.++.+|.+........+++|.+...  .....+.+..++.++..+.|+|+++
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~   62 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVK   62 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHH
Confidence            4457789999999999988765555589987543  2223456778899999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=98.33  E-value=2.4e-06  Score=46.08  Aligned_cols=63  Identities=19%  Similarity=0.293  Sum_probs=45.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcC-------CcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH-------SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..|.....||+|+||.||.+....       ....+++|.+... .....+.+..|+.++..+ .|+|++++
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~   83 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINL   83 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence            457778999999999999986431       1123488877532 223346788899999999 79999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=98.33  E-value=3.9e-06  Score=45.12  Aligned_cols=61  Identities=25%  Similarity=0.269  Sum_probs=42.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHc-CCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      +|.....||+|+||.||.+........+++|.+....   ......+..+..++..+ +|+++++
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~   65 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQ   65 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEee
Confidence            4667789999999999999887666566999875321   12233455666666666 4677654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.33  E-value=2.3e-06  Score=45.03  Aligned_cols=60  Identities=23%  Similarity=0.304  Sum_probs=43.4

Q ss_pred             cccceeeeecCCccEEEEEEc----CCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILW----HSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~----~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +.....+|+|+||.||.+...    .....+++|.+.... ......+.+|+.++..++|+|+++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~   70 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVK   70 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEee
Confidence            366788999999999876432    223345889875432 223466888999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.32  E-value=2.8e-06  Score=44.61  Aligned_cols=54  Identities=26%  Similarity=0.396  Sum_probs=40.2

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCcccc
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ||+|.||.||.+.....+..+++|.+....   ......+..|+.++..++|+|+++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   57 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVS   57 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEee
Confidence            588999999999876555556898875321   122345678899999999999876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=98.31  E-value=4.6e-06  Score=44.92  Aligned_cols=61  Identities=23%  Similarity=0.278  Sum_probs=42.8

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCC-Ccccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNY-RLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h-~niv~   77 (78)
                      +|.....||+|.||.||.+.....+..+|+|.+...   .....+.+..|..++..+.| +++++
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~   65 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQ   65 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhh
Confidence            356678999999999999988765666699987532   12233456677777777754 55543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.30  E-value=5e-07  Score=51.52  Aligned_cols=65  Identities=15%  Similarity=0.153  Sum_probs=50.4

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ...+|...+.+|.|+|++|+.+........||+|.+...   .....+.+..|-..|..| .||.+++|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkL  139 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKL  139 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEE
Confidence            346789999999999999999998877777799988542   222344566677778888 79999875

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=98.29  E-value=3.9e-06  Score=45.26  Aligned_cols=57  Identities=18%  Similarity=0.280  Sum_probs=41.6

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +.||+|+||.||.+........+++|.+...   .......+..|+.++..+ .|+|++++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~   61 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGL   61 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeE
Confidence            3689999999999988766666699988542   122334577788887777 68998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.29  E-value=1.1e-06  Score=45.78  Aligned_cols=55  Identities=31%  Similarity=0.346  Sum_probs=40.3

Q ss_pred             eeeecCCccEEEEEEcCCc------EEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWHSV------EIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~------~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|+|++|.||.+......      ..+++|.+.... ......+.+++.+++.+.|+|+++
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   63 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVK   63 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeee
Confidence            5899999999998764322      444777764322 233567889999999999999986

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.28  E-value=5e-06  Score=45.93  Aligned_cols=58  Identities=16%  Similarity=0.240  Sum_probs=43.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcC--CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH--SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|.....||.|.||.||.+....  ....+++|.+...     ....+|+.++..++|+|++++
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~  151 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINL  151 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccce
Confidence            458888999999999999986532  2334477776432     234578999999999999864

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.26  E-value=5.1e-06  Score=43.38  Aligned_cols=62  Identities=23%  Similarity=0.375  Sum_probs=42.6

Q ss_pred             CcccceeeeecCCccEEEEEEcC-CcEEEEEEEccCC----------ccccHHHHHHHHHHHHH-cCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWH-SVEIKSVKRLSKG----------SRQGMEELKNEVTLIFV-SNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~----------~~~~~~~~~~~~~~~~~-l~h~niv~l   78 (78)
                      +|+....||+|.++.+|.+.... ....+++|.+...          .......+..|+..+.+ ++|+|++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~   74 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRY   74 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeE
Confidence            36667889999999999998765 4455588876321          11123446677776664 689999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=98.26  E-value=4.8e-06  Score=44.84  Aligned_cols=56  Identities=21%  Similarity=0.283  Sum_probs=37.8

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHH-HHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVT-LIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~-~~~~l~h~niv~l   78 (78)
                      .||+|+||.||.+........+++|.+....   ......+..+.. .+..+.|+||+++
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~   61 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL   61 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCce
Confidence            6899999999999887666666999875321   112223344433 4567899999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.25  E-value=7.6e-06  Score=42.49  Aligned_cols=58  Identities=16%  Similarity=0.242  Sum_probs=44.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.+|+|+++.+|.+... +..+ ++|.....  ...+.+..|+..+..+.|+|+++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~-~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~   63 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR-GNKV-AVKCIKND--ATAQAFLAEASVMTQLRHSNLVQ   63 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc-CCcE-EEEEeCCC--chHHHHHHHHHHHHhCCCCCeee
Confidence            46777899999999999998764 3344 88876432  23456889999999999999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.25  E-value=5.9e-06  Score=42.99  Aligned_cols=54  Identities=22%  Similarity=0.236  Sum_probs=41.2

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCcccc
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|.|.++.+|.+........+++|.+....   ....+.+..++.++..++|+|+++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   57 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVK   57 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEee
Confidence            588999999999987545555899875322   223456888999999999999986

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=98.25  E-value=4.7e-06  Score=44.36  Aligned_cols=66  Identities=20%  Similarity=0.323  Sum_probs=47.1

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEc-------CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILW-------HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ...++|.....+|+|+||.||.+...       .....+++|.+... .......+..|+.++..+ .|+|++++
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~   86 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL   86 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchhe
Confidence            34566788899999999999988642       11234488877532 223346788899999998 79999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=98.25  E-value=9e-06  Score=43.85  Aligned_cols=61  Identities=23%  Similarity=0.347  Sum_probs=43.2

Q ss_pred             CcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCC----ccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKG----SRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      +|...+.||+|+||.||.+...   ..+..+++|.+...    .....+.+..|+.++..+ +|+|+++
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~   69 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVT   69 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCccc
Confidence            4677899999999999987653   23445589987432    112234577788888888 5888875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.23  E-value=1.2e-06  Score=49.84  Aligned_cols=65  Identities=22%  Similarity=0.325  Sum_probs=41.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcE-EEEEEE--------------c-c--CCccccHHHHHHHHHHHHHcCCCcc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVE-IKSVKR--------------L-S--KGSRQGMEELKNEVTLIFVSNYRLL   75 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~-~~~~k~--------------~-~--~~~~~~~~~~~~~~~~~~~l~h~ni   75 (78)
                      ..+.|.....||+|+||.||.+....... ..+.+.              + .  .........+.+|+.++..++|+||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            34678899999999999999876532111 001110              0 0  0011123457789999999999999


Q ss_pred             ccC
Q 043701           76 LHM   78 (78)
Q Consensus        76 v~l   78 (78)
                      +++
T Consensus       226 v~l  228 (501)
T PHA03210        226 LKI  228 (501)
T ss_pred             CcE
Confidence            864

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=98.22  E-value=6.2e-06  Score=44.32  Aligned_cols=57  Identities=28%  Similarity=0.323  Sum_probs=39.5

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHc-CCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +.||+|+||.||.+.....+..+++|.+....   .........+..++..+ +|+|++++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~   61 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHL   61 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCe
Confidence            36899999999999987655566999885321   12234455666666654 89998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.21  E-value=6.3e-06  Score=44.40  Aligned_cols=55  Identities=18%  Similarity=0.254  Sum_probs=39.9

Q ss_pred             eeeec--CCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           23 KLGEG--RFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g--~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .||.|  +++.||.+.....+..+++|.....  .....+.+.+|+.++..++|+||++
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~   63 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMT   63 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            35555  8889999988655556699987532  2223456788888888899999986

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=98.20  E-value=8.1e-06  Score=43.56  Aligned_cols=64  Identities=22%  Similarity=0.325  Sum_probs=46.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcC-------CcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWH-------SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+....       ....+++|.+... .......+..|+.++..+ +|+|++++
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~   89 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL   89 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            4568888999999999999886532       1123488887543 223345678899999988 79999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.20  E-value=1.2e-05  Score=42.25  Aligned_cols=60  Identities=17%  Similarity=0.239  Sum_probs=41.2

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHc---CCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVS---NYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l---~h~niv~   77 (78)
                      |.....+|.|.++.+|.+........+++|.+....  ......+..++.++.++   .|+|+++
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~   65 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVR   65 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcce
Confidence            355688999999999999987644555999885321  11223455676666555   5999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.20  E-value=6.1e-06  Score=47.29  Aligned_cols=24  Identities=33%  Similarity=0.688  Sum_probs=21.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEE
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVIL   37 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~   37 (78)
                      ..++|...+.||+|+||.||+|..
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~  166 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLR  166 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEe
Confidence            457899999999999999999864

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.19  E-value=8e-06  Score=42.45  Aligned_cols=60  Identities=23%  Similarity=0.348  Sum_probs=39.4

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccC---C--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK---G--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~---~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |.....||+|++|.||.+.........++|....   .  .......+..|+.++..++|+|+++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   66 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVK   66 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHH
Confidence            5566889999999999987654322223343321   1  2223344667788899999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.19  E-value=1.2e-06  Score=49.44  Aligned_cols=57  Identities=26%  Similarity=0.377  Sum_probs=42.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHH--HcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIF--VSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~--~l~h~niv~   77 (78)
                      .+++...++|+|+||.||++.+.+  ..||+|.++.   .+.+.|..|-.+..  -+.|+||++
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~--~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~  268 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDN--RLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQ  268 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccC--ceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHH
Confidence            445667899999999999998754  4559998843   34566777766655  467999986

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=98.19  E-value=9.9e-06  Score=42.44  Aligned_cols=55  Identities=20%  Similarity=0.340  Sum_probs=40.0

Q ss_pred             eeeecCCccEEEEEEcCCc--EEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           23 KLGEGRFGPVYKVILWHSV--EIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~--~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .+|+|+||.||.+......  ..+++|..... .....+.+..|+..+.++ +|+|+++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~   60 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN   60 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeee
Confidence            5899999999999875432  23367776532 233345788899999999 7999976

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=98.18  E-value=5.1e-06  Score=43.06  Aligned_cols=58  Identities=17%  Similarity=0.284  Sum_probs=44.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+|.....+|.|+||.||.+.. .+..+ ++|.+....  ....+..|+.++..++|+|+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~-~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~   63 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY-TGQKV-AVKNIKCDV--TAQAFLEETAVMTKLHHKNLVR   63 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc-CCCce-EEEeecCcc--hHHHHHHHHHHHHhCCCCCcCe
Confidence            3477789999999999998864 33344 888774322  2457888999999999999986

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=98.16  E-value=1.3e-05  Score=42.01  Aligned_cols=56  Identities=21%  Similarity=0.271  Sum_probs=39.0

Q ss_pred             eeeecCCccEEEEEEcCC--cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILWHS--VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~--~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||+|+||.||.+.....  ...+++|.+... .......+.+++.++..++|+|++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~   60 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQC   60 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhhe
Confidence            489999999999865322  223356655432 22345678899999999999999863

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.15  E-value=1e-05  Score=41.68  Aligned_cols=54  Identities=24%  Similarity=0.302  Sum_probs=40.6

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHHHHHcCCCcccc
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|.|.++.+|.+........+++|.+.....   .....+..++.++..+.|+|+++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   57 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVK   57 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHH
Confidence            5889999999998765445558888754322   23456888889999999999875

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.13  E-value=4.6e-07  Score=49.00  Aligned_cols=60  Identities=23%  Similarity=0.461  Sum_probs=49.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..|.....+|+|++|.||++.++..+.++|+|..+..  .+.+..+.|+.+|.....+.+|+
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVK   92 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVK   92 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhh
Confidence            4467788999999999999988877777799987543  35788999999999999888875

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.12  E-value=5.9e-06  Score=46.05  Aligned_cols=62  Identities=24%  Similarity=0.372  Sum_probs=47.9

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|.....+|.|..|.||.+........+|+|.+....   .........|-+++..++||-++.|
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTL  142 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTL  142 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchh
Confidence            3666788999999999999998776777999996542   2233456667789999999988653

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.11  E-value=1.7e-05  Score=45.98  Aligned_cols=54  Identities=24%  Similarity=0.381  Sum_probs=41.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN   71 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~   71 (78)
                      .|...++||+|.||+|.++.+......||+|.++.... -...-..|+.++..++
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln  240 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLN  240 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHh
Confidence            46778999999999999999988777779999854321 2333456777777775

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.05  E-value=7.1e-06  Score=47.71  Aligned_cols=63  Identities=19%  Similarity=0.318  Sum_probs=47.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--------cccHHHHHHHHHHHHHcC---CCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--------RQGMEELKNEVTLIFVSN---YRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~l~---h~niv~l   78 (78)
                      .+|.....+|.|.||.|+.+.+......+.+|.+....        -........|+.+|..+.   |+||+++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKl  634 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKL  634 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhh
Confidence            34777889999999999999998777676888874321        111234567888988886   9999875

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.03  E-value=6.7e-06  Score=48.28  Aligned_cols=63  Identities=16%  Similarity=0.199  Sum_probs=49.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.+..++.+|.|+.|.|..+.....++.+|+|.+...   .........+|+.+|+-+.|+|+++|
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~L   77 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRL   77 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeee
Confidence            4578889999999999999988777777799988544   22223457789999999999999864

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.02  E-value=4.6e-05  Score=40.31  Aligned_cols=61  Identities=25%  Similarity=0.339  Sum_probs=43.0

Q ss_pred             CcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCCc----cccHHHHHHHHHHHHHc-CCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKGS----RQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      +|+....+|.|.||.+|.+...   ..+..+++|.+....    ....+.+..|+.++..+ +|+|+++
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~   69 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVT   69 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhc
Confidence            3566788999999999998753   123445888875321    12235577888889988 5899875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.01  E-value=3e-06  Score=44.39  Aligned_cols=60  Identities=17%  Similarity=0.324  Sum_probs=46.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEc-CCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILW-HSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      .++|+..+.+|.|.++.|+.|..- +...+ .+|.+.+-   ..+...+|+.++..|. |+||+.|
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~-ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L   98 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKC-VIKILKPV---KKKKIKREIKILQNLRGGPNIIKL   98 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceE-EEeeechH---HHHHHHHHHHHHHhccCCCCeeeh
Confidence            467888999999999999998743 33344 77777543   2566889999999996 9999864

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=97.97  E-value=2.8e-05  Score=45.55  Aligned_cols=66  Identities=24%  Similarity=0.337  Sum_probs=48.0

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEc----C---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILW----H---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~----~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ...+++.....+|.|.||.|+++...    .   ....+|+|.+... ...+.+.+..|+.+|..+ .|+|++.+
T Consensus       293 ~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~l  367 (609)
T KOG0200|consen  293 IPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNL  367 (609)
T ss_pred             echhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhh
Confidence            34445556679999999999998643    1   1344589988543 335667899999999988 59999864

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=97.94  E-value=3.2e-05  Score=41.75  Aligned_cols=54  Identities=24%  Similarity=0.409  Sum_probs=35.0

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHc---CCCcccc
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVS---NYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l---~h~niv~   77 (78)
                      ||+|+||.||.+........+|+|.+....   .........+..++...   .|+|+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~   60 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG   60 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcc
Confidence            589999999999887655566999874321   11222344455555443   6898875

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.94  E-value=6.7e-07  Score=52.30  Aligned_cols=65  Identities=18%  Similarity=0.335  Sum_probs=51.8

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +..++|+....+|.|.+|.||+++......+.|+|.++.....+.+...+|+-.++..+|+||+.
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~niva   76 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVA   76 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHH
Confidence            56678999999999999999999987666666788775544444555678888888999999985

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.93  E-value=6.7e-06  Score=51.26  Aligned_cols=61  Identities=21%  Similarity=0.334  Sum_probs=47.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccC--CccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK--GSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...-..+||.|.||.||.+...+.+...|+|.+.-  ........+.+|..++..+.|||+|+
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~ 1298 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVR 1298 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccc
Confidence            34567889999999999998877666668888742  23334456788999999999999986

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=97.90  E-value=5.7e-06  Score=44.17  Aligned_cols=62  Identities=26%  Similarity=0.384  Sum_probs=45.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHH-HHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLI-FVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~-~~l~h~niv~   77 (78)
                      ++++....||.|.||.|++-.+...+.+.|+|.++... ..+.+.+..|.... +.-..+|||+
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVk  127 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVK  127 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHH
Confidence            45566678999999999998887666666999997653 34556788887654 4446788886

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.90  E-value=7.8e-06  Score=44.87  Aligned_cols=62  Identities=19%  Similarity=0.223  Sum_probs=47.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+++|+|.||.|..++.......||+|.++..-.   .....-.-|-+++...+||-+..
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~  232 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTS  232 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHH
Confidence            678889999999999999998887778889999865422   22334456678888888987653

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=97.88  E-value=8.7e-05  Score=39.24  Aligned_cols=61  Identities=23%  Similarity=0.351  Sum_probs=42.4

Q ss_pred             CcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCCc----cccHHHHHHHHHHHHHc-CCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKGS----RQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      +|...+.+|+|.++.+|.+...   .....+++|.+....    ....+.+..|+.++..+ +|+|+++
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~   69 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVT   69 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhh
Confidence            3566788999999999988653   223344888774321    12235577889889988 5899875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=97.84  E-value=0.00014  Score=36.09  Aligned_cols=54  Identities=28%  Similarity=0.345  Sum_probs=40.6

Q ss_pred             eeecCCccEEEEEEcCCcEEEEEEEccCCccc-cHHHHHHHHHHHHHcCCCcccc
Q 043701           24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ-GMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        24 ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +|.|.++.+|.+........+++|.+...... ..+.+.+|+..+..+.|+++++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~   55 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVK   55 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeee
Confidence            57899999999988654444488887544321 3467889999999999988875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=97.83  E-value=1.6e-05  Score=43.52  Aligned_cols=57  Identities=19%  Similarity=0.296  Sum_probs=44.4

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +.+|+|.++.|-.+..-.....||+|.+............+|++.+-.. .|+||++|
T Consensus        84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqL  141 (463)
T KOG0607|consen   84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQL  141 (463)
T ss_pred             HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHH
Confidence            7899999999987765544455599999766555667788999888766 69999864

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.81  E-value=0.00014  Score=38.74  Aligned_cols=35  Identities=20%  Similarity=0.190  Sum_probs=26.1

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCC---cEEEEEEEc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRL   49 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~   49 (78)
                      .+.|...+.||+|+||.||.+.....   ...+++|..
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~   48 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIE   48 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEec
Confidence            35788899999999999999987544   334355543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.77  E-value=0.00011  Score=42.25  Aligned_cols=54  Identities=19%  Similarity=0.221  Sum_probs=42.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS   70 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l   70 (78)
                      +.|.....+|.|.|++||.+++....+.||+|..+.... -.+.-..|+.++.+.
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v  131 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQV  131 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHH
Confidence            456678999999999999999987777889998865432 245567788887765

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.73  E-value=0.00029  Score=36.91  Aligned_cols=63  Identities=8%  Similarity=-0.109  Sum_probs=44.8

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHH---H------HHHHHHHHHHcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGME---E------LKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~---~------~~~~~~~~~~l~h~niv~   77 (78)
                      ...+.|...+++++|+|+.||.... .+... ++|.+.........   .      +.+++..+.++.|+++..
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~-iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~   99 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKY-ILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLAS   99 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec-CCCcE-EEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCc
Confidence            3457789999999999999998544 44445 99988543222111   2      567888888899998864

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=97.72  E-value=0.00016  Score=43.85  Aligned_cols=70  Identities=19%  Similarity=0.302  Sum_probs=50.2

Q ss_pred             ehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701            7 DFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus         7 ~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .++.+.+.++.|++.+++|.|.++.||++.........|+|.+.... ...+....|..+++.+ +|+|++.
T Consensus        10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~   80 (953)
T KOG0587|consen   10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVAT   80 (953)
T ss_pred             chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcce
Confidence            34555677888999999999999999999877655555888775432 2234455566677666 6999874

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.71  E-value=8.3e-05  Score=37.62  Aligned_cols=29  Identities=17%  Similarity=0.211  Sum_probs=23.4

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSK   51 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~   51 (78)
                      ..||+|+++.||.+....+..+ |+|.++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~v-AvKv~~~   31 (190)
T cd05147           3 GCISTGKEANVYHATTANGEER-AIKIYKT   31 (190)
T ss_pred             CccccccceEEEEEECCCCCEE-EEEEEEe
Confidence            6799999999999988654444 9998854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.68  E-value=7.2e-06  Score=50.53  Aligned_cols=67  Identities=19%  Similarity=0.316  Sum_probs=48.9

Q ss_pred             HHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           11 IAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        11 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +.-..++|....+||+|.||.|...++.....+||+|.+...   ...+..-|..|-.+|.....++|++
T Consensus        70 lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~  139 (1317)
T KOG0612|consen   70 LRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQ  139 (1317)
T ss_pred             HhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHH
Confidence            334457899999999999999999999888888999998653   2223344666666666555555554

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=97.63  E-value=0.00038  Score=35.47  Aligned_cols=50  Identities=16%  Similarity=0.214  Sum_probs=37.5

Q ss_pred             CCccEEEEEEcCCcEEEEEEEccCCcccc-HHHHHHHHHHHHHcCCCcccc
Q 043701           28 RFGPVYKVILWHSVEIKSVKRLSKGSRQG-MEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        28 ~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|.+|.+........+++|.+....... .+.+..|+..+..+.|+|+++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~   51 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVR   51 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHH
Confidence            46889999886544445899886543333 578899999999999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=97.62  E-value=0.00035  Score=37.40  Aligned_cols=49  Identities=14%  Similarity=0.052  Sum_probs=32.9

Q ss_pred             ccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           30 GPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        30 ~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.++..........+++|.+...  .......+..|+..+..++|+|++++
T Consensus        14 ~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~   64 (314)
T cd08216          14 MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPY   64 (314)
T ss_pred             ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhh
Confidence            44444444334445599987532  33345678899999999999999863

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=97.59  E-value=6.7e-06  Score=46.77  Aligned_cols=63  Identities=17%  Similarity=0.146  Sum_probs=44.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccC---Cc----cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK---GS----RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~---~~----~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|-...++|.|+|+.||++.+-.....+|+|.-..   +.    ....+...+|.++.+.|+||.||++
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKl  532 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKL  532 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeee
Confidence            445567889999999999998766556657775421   11    1113345678889999999999874

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=97.54  E-value=0.00055  Score=36.25  Aligned_cols=55  Identities=24%  Similarity=0.315  Sum_probs=33.3

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCCcc--c-cHHHHHHHHH---HHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--Q-GMEELKNEVT---LIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~-~~~~~~~~~~---~~~~l~h~niv~   77 (78)
                      .+|+|+||.||.+........+++|.+.....  . ....+..+..   .+....|+|++.
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   61 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC   61 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeE
Confidence            37999999999998866555669998743211  1 1122333332   233346888764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=97.54  E-value=0.00065  Score=35.93  Aligned_cols=55  Identities=22%  Similarity=0.282  Sum_probs=33.8

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCCccc--c-HHHHHHHH---HHHHHcCCCcccc
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ--G-MEELKNEV---TLIFVSNYRLLLH   77 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~-~~~~~~~~---~~~~~l~h~niv~   77 (78)
                      .||+|+||.||.+........+++|.+......  . ...+..+.   ..+....|+|++.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   61 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC   61 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEee
Confidence            379999999999987655555699987542111  1 11233333   3344457888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=97.53  E-value=0.00051  Score=35.79  Aligned_cols=57  Identities=18%  Similarity=0.311  Sum_probs=35.6

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHH-HHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTL-IFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~-~~~l~h~niv~l   78 (78)
                      +.+|.|.+|.||.+.....+..+++|.+.....   .....+..+... .....|+|++++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~   62 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKL   62 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeee
Confidence            458999999999998765555559998754321   112223344333 334579998763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.52  E-value=4.5e-05  Score=41.15  Aligned_cols=61  Identities=16%  Similarity=0.206  Sum_probs=44.6

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +.+.+..||-|.||.||...++..+..++.|.+..-  +....+.+-+|+..+.-.+|.|+..
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLS  116 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLS  116 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHH
Confidence            356678999999999999988755555588876321  2233566778888888888998864

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.50  E-value=0.001  Score=33.57  Aligned_cols=29  Identities=21%  Similarity=0.240  Sum_probs=23.3

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSK   51 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~   51 (78)
                      ..||+|+++.||.+....+..+ ++|.++.
T Consensus         3 ~~ig~G~~~~Vy~a~~~~g~~v-avKv~~~   31 (190)
T cd05145           3 GCISTGKEANVYHARTGDGEEL-AVKIYKT   31 (190)
T ss_pred             ceeecCCCcEEEEEEcCCCCEE-EEEEEEc
Confidence            6799999999999987644444 9998854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=97.49  E-value=0.00071  Score=35.63  Aligned_cols=37  Identities=22%  Similarity=0.205  Sum_probs=27.1

Q ss_pred             hcCcccceee--eecCCccEEEEEEcCCcEEEEEEEccC
Q 043701           15 TDNFSSYNKL--GEGRFGPVYKVILWHSVEIKSVKRLSK   51 (78)
Q Consensus        15 ~~~~~~~~~i--g~g~~~~v~~~~~~~~~~~~~~k~~~~   51 (78)
                      .+++...+.+  |+|.||.||.+........+++|.+..
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~   51 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKA   51 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEeh
Confidence            3455555555  999999999998776556668888743

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.39  E-value=9.8e-05  Score=42.96  Aligned_cols=62  Identities=16%  Similarity=0.336  Sum_probs=47.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEc--cCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRL--SKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~--~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..|+..+.||.|+.+.||+....+.+.. ++|..  ...+......|.+|+..+.++ .|.+|++|
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iy-alkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL  425 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIY-ALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQL  425 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcch-hhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence            4477789999999999999987655544 66655  234566678899999999999 57888764

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=97.37  E-value=0.00018  Score=40.25  Aligned_cols=65  Identities=22%  Similarity=0.371  Sum_probs=47.1

Q ss_pred             HHHhhcCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCCccccHHHHHHHHHHHHHcC-CCcccc
Q 043701           11 IAKATDNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-YRLLLH   77 (78)
Q Consensus        11 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~   77 (78)
                      +....+.|...+.||.|.|+.||++....   ....+++|.+....  .......|++.+..+. +.|+++
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~   99 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIK   99 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhc
Confidence            34455678889999999999999987654   44556999885433  2455778888888774 566654

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=97.36  E-value=0.0012  Score=38.36  Aligned_cols=60  Identities=13%  Similarity=0.036  Sum_probs=38.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccC-Ccc------ccHHHHHHHHHHHHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK-GSR------QGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~-~~~------~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+...+.||+|.|+.||++........ ..+.... ...      ...+.+.+|+.++..+.|++++.
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~~v-~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~  400 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRDAV-IKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPT  400 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCccce-eEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCe
Confidence            345578899999999999887544333 2111111 111      12345788999999999888753

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=97.34  E-value=0.00086  Score=36.42  Aligned_cols=60  Identities=17%  Similarity=0.394  Sum_probs=44.3

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcC-CCcccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSN-YRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~-h~niv~   77 (78)
                      +.....+|.|..|+|++..++..+.+.|+|.++.. +....+....++.++...+ .|.||+
T Consensus        94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~  155 (391)
T KOG0983|consen   94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQ  155 (391)
T ss_pred             hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeee
Confidence            44556789999999999998876656599998643 4455667788887766654 677765

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.21  E-value=0.00088  Score=39.26  Aligned_cols=37  Identities=38%  Similarity=0.523  Sum_probs=30.0

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCC----cEEEEEEEcc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHS----VEIKSVKRLS   50 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~----~~~~~~k~~~   50 (78)
                      ..++|...+.||+|+||.||++.....    ...+++|.+.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~  170 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKAT  170 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEec
Confidence            457889999999999999999988655    4455888764

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.20  E-value=0.0023  Score=32.52  Aligned_cols=53  Identities=9%  Similarity=0.038  Sum_probs=35.1

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--c------cHHHHHHHHHHHHHcCCCccc
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--Q------GMEELKNEVTLIFVSNYRLLL   76 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~------~~~~~~~~~~~~~~l~h~niv   76 (78)
                      ..||+|.+|.||.+... +... ++|.......  .      ....+..|+..+..+.|+++.
T Consensus         2 ~~l~~G~~~~vy~~~~~-~~~~-~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   62 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFL-GIKA-VIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVN   62 (211)
T ss_pred             cccccCceEEEEEEeeC-CCce-EEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            46899999999999873 3344 6676432211  1      123467788888888877764

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.19  E-value=0.0029  Score=32.09  Aligned_cols=33  Identities=21%  Similarity=0.132  Sum_probs=26.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEcc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLS   50 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~   50 (78)
                      .+...+.||.|+++.||.+....+..+ ++|..+
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~v-avK~~~   48 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPV-ALKFHR   48 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEE-EEEEEe
Confidence            366678999999999999987655555 999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=97.18  E-value=0.00012  Score=41.82  Aligned_cols=63  Identities=22%  Similarity=0.366  Sum_probs=45.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|....++|.|+||.||-+..+..+..||.|.+.....   .....-..|-.++.+.+.+-||.|
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsl  250 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSL  250 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEE
Confidence            558888999999999999998888777778888743221   122335566677777777777653

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.13  E-value=7.7e-06  Score=43.48  Aligned_cols=62  Identities=15%  Similarity=0.236  Sum_probs=42.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccC--CccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK--GSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +-|.-...+|+|.|+.|++++....+.-+++|..-.  ....-...-.+++.++..+.|+|++.
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~n   80 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN   80 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHH
Confidence            335556789999999999988765544446665421  11222344678899999999999875

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.10  E-value=0.002  Score=34.48  Aligned_cols=56  Identities=23%  Similarity=0.264  Sum_probs=36.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN   71 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~   71 (78)
                      ..+.|.....||.|+||.+|.+..-..+..+|+|.-....  ....+..|..+...+.
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~   68 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQ   68 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhc
Confidence            3456888999999999999999875545555988642211  1222445555555554

>smart00090 RIO RIO-like kinase

Probab=96.92  E-value=0.0047  Score=32.46  Aligned_cols=35  Identities=17%  Similarity=0.103  Sum_probs=26.5

Q ss_pred             CcccceeeeecCCccEEEEE-EcCCcEEEEEEEccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVI-LWHSVEIKSVKRLSK   51 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~-~~~~~~~~~~k~~~~   51 (78)
                      .|.....||+|+++.||.+. ....+..+++|.+..
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~   64 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRT   64 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEc
Confidence            46788999999999999998 333334449998753

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=96.88  E-value=0.00048  Score=40.75  Aligned_cols=50  Identities=18%  Similarity=0.252  Sum_probs=36.7

Q ss_pred             ccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...+-+|.|.-|.|+.|.+.. ..+ |+|..+...       .-++..+++|+|+||+.
T Consensus       127 sELeWlGSGaQGAVF~Grl~n-etV-AVKKV~elk-------ETdIKHLRkLkH~NII~  176 (904)
T KOG4721|consen  127 SELEWLGSGAQGAVFLGRLHN-ETV-AVKKVRELK-------ETDIKHLRKLKHPNIIT  176 (904)
T ss_pred             hhhhhhccCcccceeeeeccC-cee-hhHHHhhhh-------hhhHHHHHhccCcceee
Confidence            334668999999999999854 344 888764432       23667899999999975

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=96.85  E-value=0.0056  Score=30.90  Aligned_cols=51  Identities=16%  Similarity=0.130  Sum_probs=33.2

Q ss_pred             eeeecCCccEEEEEEcCCcEEEEEEEccCCc--cc------cHHHHHHHHHHHHHcCCCcc
Q 043701           23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQ------GMEELKNEVTLIFVSNYRLL   75 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~------~~~~~~~~~~~~~~l~h~ni   75 (78)
                      .||+|.++.||.+... +..+ ++|......  ..      ....+..|+.++..+.|+++
T Consensus         1 ~ig~G~~~~vy~~~~~-~~~~-viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   59 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL-GLKA-VIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGV   59 (199)
T ss_pred             CCCCCceEEEEEeecC-CccE-EEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            3789999999999854 3344 677643211  11      12456678888888877654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=96.69  E-value=0.0011  Score=35.94  Aligned_cols=62  Identities=19%  Similarity=0.300  Sum_probs=42.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLL   76 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv   76 (78)
                      ..+.|.+...+|+|.||.+..+.++.+....++|..+.. .....+|.+|.----.| .|.||+
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi   84 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHII   84 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhh
Confidence            346788889999999999999998876666588877542 23356677775432233 355654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=96.64  E-value=0.0076  Score=30.08  Aligned_cols=29  Identities=21%  Similarity=0.289  Sum_probs=23.0

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSK   51 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~   51 (78)
                      +.||+|++|.||.+....+..+ ++|.+..
T Consensus         3 ~~lg~G~~g~Vy~a~~~~~~~v-avKv~~~   31 (187)
T cd05119           3 GPIGTGKEADVYLALDGDGEPV-AVKIYRT   31 (187)
T ss_pred             cccccccceeEEEEECCCCCEE-EEEEEec
Confidence            5789999999999987645544 9998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=96.61  E-value=0.0016  Score=35.42  Aligned_cols=63  Identities=16%  Similarity=0.184  Sum_probs=43.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC----ccc----cHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG----SRQ----GMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~----~~~----~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..|...+.+|.|..+.+.++....++..+++|.+...    ...    -.+.-.+|+.+++.+ .||+|+++
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l   88 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDL   88 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEe
Confidence            3466778899999998888877654444488877321    111    124466788888887 79999864

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=96.55  E-value=0.019  Score=27.14  Aligned_cols=48  Identities=15%  Similarity=0.083  Sum_probs=34.3

Q ss_pred             ceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCC
Q 043701           21 YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNY   72 (78)
Q Consensus        21 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h   72 (78)
                      ...++.|.++.+|.+.... ... ++|.......  ...+..|+..+..+.+
T Consensus         3 ~~~i~~g~~~~v~~~~~~~-~~~-~iK~~~~~~~--~~~~~~e~~~~~~l~~   50 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD-EDY-VLKINPSREK--GADREREVAILQLLAR   50 (155)
T ss_pred             ceecccccccceEEEEecC-CeE-EEEecCCCCc--hhHHHHHHHHHHHHHH
Confidence            4678999999999998754 344 7887744322  3567788888887755

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=96.54  E-value=0.01  Score=32.49  Aligned_cols=55  Identities=25%  Similarity=0.216  Sum_probs=36.1

Q ss_pred             CcccceeeeecCCccEEEEEEcCCc-EEEEEEEccCCccccHHHHHHHHHHHHHcC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSV-EIKSVKRLSKGSRQGMEELKNEVTLIFVSN   71 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~   71 (78)
                      .|.....||+|+||.||.+...... ..+|+|.-..........+..|..++..+.
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~   74 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLE   74 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHh
Confidence            7889999999999999999876542 344777654322111124556666666554

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.46  E-value=0.019  Score=32.96  Aligned_cols=30  Identities=27%  Similarity=0.341  Sum_probs=25.4

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG   52 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   52 (78)
                      +.++.|++|+||++...++..+ ++|..++.
T Consensus       123 ~plasaSigQVh~A~l~~G~~V-aVKv~rp~  152 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEV-AVKVLRPG  152 (437)
T ss_pred             cceeeeehhheEEEEecCCCEE-EEEeeCCC
Confidence            6799999999999998877666 99988654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=96.21  E-value=0.028  Score=29.11  Aligned_cols=46  Identities=22%  Similarity=0.129  Sum_probs=30.3

Q ss_pred             cCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           27 GRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        27 g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      |.++.||.+.....+..+++|.+....     .+..+...+....|+|+++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~   49 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVC   49 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceee
Confidence            788999999887666666999885432     1223334444556888875

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=96.13  E-value=0.003  Score=35.48  Aligned_cols=56  Identities=21%  Similarity=0.254  Sum_probs=40.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS   70 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l   70 (78)
                      .++.|.....+|+|.||.|..+.+......+|+|.++.-... .++-.-|+..+.++
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki  142 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKI  142 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHH
Confidence            356688889999999999999988766667788887543222 34455566677766

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=95.95  E-value=0.0064  Score=37.34  Aligned_cols=55  Identities=27%  Similarity=0.351  Sum_probs=37.3

Q ss_pred             cccceeeeecCCcc-EEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           18 FSSYNKLGEGRFGP-VYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~-v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      |...+++|.|+-|. ||.|.+. ++.+ |+|.+-..   ...-..+|+..+... .|+||++
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~V-AVKrll~e---~~~~A~rEi~lL~eSD~H~NviR  567 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREV-AVKRLLEE---FFDFAQREIQLLQESDEHPNVIR  567 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-Ccee-hHHHHhhH---hHHHHHHHHHHHHhccCCCceEE
Confidence            45567788888885 7888874 3444 88876221   122345788888877 5999986

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=95.83  E-value=0.0034  Score=37.92  Aligned_cols=61  Identities=21%  Similarity=0.367  Sum_probs=44.4

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.||-|.||.|+..+--+...+||+|.++..+   ......+..|-.++...++..+|+|
T Consensus       631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrL  694 (1034)
T KOG0608|consen  631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRL  694 (1034)
T ss_pred             eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEE
Confidence            677789999999999988765667777999885432   2223345556677888888888864

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=95.51  E-value=0.1  Score=31.04  Aligned_cols=34  Identities=24%  Similarity=0.226  Sum_probs=27.0

Q ss_pred             CcccceeeeecCCccEEEEEEcC-CcEEEEEEEccCC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWH-SVEIKSVKRLSKG   52 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~   52 (78)
                      .|+. ..++.|++++||.+...+ +..+ ++|..++.
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~V-AVKV~rP~  155 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREV-VVKVLRPD  155 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEE-EEEEeCcc
Confidence            4555 679999999999999877 5555 99998654

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.49  E-value=0.0077  Score=34.75  Aligned_cols=36  Identities=31%  Similarity=0.385  Sum_probs=30.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK   51 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~   51 (78)
                      .+|....++|.|+||.|..+..+....+||+|.+..
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkK  384 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKK  384 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhcc
Confidence            467888999999999999998777777789998754

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=95.45  E-value=0.0098  Score=33.47  Aligned_cols=36  Identities=25%  Similarity=0.398  Sum_probs=30.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK   51 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~   51 (78)
                      .+|....+||.|+++.|..........+||+|.+..
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkk  285 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKK  285 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHH
Confidence            568889999999999999988887778889998754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=95.33  E-value=0.16  Score=26.76  Aligned_cols=57  Identities=26%  Similarity=0.401  Sum_probs=40.2

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc---cHHHHHHHHHHHHHcCCC-cccc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ---GMEELKNEVTLIFVSNYR-LLLH   77 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~~~l~h~-niv~   77 (78)
                      |.....+|.|.|+.+|.+...   ..+++|.+......   ....+..++..+..+.|+ ++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   62 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVK   62 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceee
Confidence            445678899999999998876   33377777443221   356788888888898877 5654

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=95.32  E-value=0.044  Score=32.71  Aligned_cols=55  Identities=13%  Similarity=0.094  Sum_probs=36.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN   71 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~   71 (78)
                      ..|......|+|-|+.|..+.....+..||+|.+... ....+.=..|++++.+|.
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~  486 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLN  486 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhh
Confidence            4466677889999999999988754445599998543 122333445666666553

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=95.29  E-value=0.012  Score=27.80  Aligned_cols=30  Identities=23%  Similarity=0.271  Sum_probs=25.0

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG   52 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   52 (78)
                      ..++.++.++||++....+..+ ++|..++.
T Consensus        17 ~PlasASiaQVh~a~l~~g~~V-aVKV~rP~   46 (119)
T PF03109_consen   17 EPLASASIAQVHRARLKDGEEV-AVKVQRPG   46 (119)
T ss_pred             chhhheehhhheeeeecccchh-hhhhcchH
Confidence            6689999999999998877776 99987554

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=95.18  E-value=0.013  Score=33.63  Aligned_cols=64  Identities=23%  Similarity=0.243  Sum_probs=41.0

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEE-----EEEEEcc-CCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEI-----KSVKRLS-KGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~-----~~~k~~~-~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ....+....++-+|.||.+|.|.+++....     +-+|.+. ..+..+...+..|.-.+..++|+|+.+
T Consensus       282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~  351 (563)
T KOG1024|consen  282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLS  351 (563)
T ss_pred             hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccc
Confidence            334567778889999999999976532211     0122221 223334556778877777888999875

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=94.89  E-value=0.026  Score=31.80  Aligned_cols=35  Identities=23%  Similarity=0.263  Sum_probs=27.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRL   49 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~   49 (78)
                      .-+|.....||.|+||.++.|.---....+|+|.-
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfE   61 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFE   61 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEec
Confidence            35688899999999999999976555566688864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=94.67  E-value=0.04  Score=29.17  Aligned_cols=65  Identities=23%  Similarity=0.357  Sum_probs=41.6

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHH-HcCCCccc
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIF-VSNYRLLL   76 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~-~l~h~niv   76 (78)
                      +...+.+.....+|+|.+|.+-+-++..++.+.|+|.+... +.+.......++.+.. ....|..|
T Consensus        42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V  108 (282)
T KOG0984|consen   42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTV  108 (282)
T ss_pred             ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEE
Confidence            33445556667899999999887777655555599998643 3334455667765433 33455544

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=94.32  E-value=0.07  Score=33.78  Aligned_cols=35  Identities=23%  Similarity=0.434  Sum_probs=28.1

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEcc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLS   50 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~   50 (78)
                      ...|.+...+|+|++|.||.+....+. .+|+|.-.
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~-~~alK~e~  731 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSNGK-LVALKVEK  731 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCCCc-EEEEEeec
Confidence            345788899999999999999987744 44998763

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=94.18  E-value=0.0065  Score=35.81  Aligned_cols=63  Identities=19%  Similarity=0.275  Sum_probs=42.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++.....+|-|+||.|-..........+|+|+++..   ...+.+....|-.+|...+.+.||+|
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrL  485 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRL  485 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHH
Confidence            4456677899999999877665443333477777432   33344556777788888888888764

>PRK12274 serine/threonine protein kinase; Provisional

Probab=94.04  E-value=0.41  Score=25.31  Aligned_cols=57  Identities=12%  Similarity=-0.010  Sum_probs=34.2

Q ss_pred             ccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc----ccHHHHHHHHHHHHHcCC-Ccccc
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR----QGMEELKNEVTLIFVSNY-RLLLH   77 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~~~~~~~l~h-~niv~   77 (78)
                      .....++.+.||.|+.... ..... ..+.+.....    .....+.+|++++.++.| +++++
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~-~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~   66 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKF-VRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPR   66 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCcee-eecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCE
Confidence            4457899999999995544 33333 4343422211    112257889999999954 55543

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=93.56  E-value=0.02  Score=31.75  Aligned_cols=60  Identities=23%  Similarity=0.322  Sum_probs=41.1

Q ss_pred             hhcCccc-ceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHH-HcCCCccccC
Q 043701           14 ATDNFSS-YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIF-VSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~-~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~l~h~niv~l   78 (78)
                      ++++|.. ..++|-|-.|.|..+..+....-+|+|.+..     ...-.+|+++.- ...|+|||++
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~I  120 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSI  120 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEe
Confidence            4455533 5789999999999888776555558887743     234557777643 4479999863

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=92.71  E-value=0.37  Score=28.67  Aligned_cols=30  Identities=20%  Similarity=0.312  Sum_probs=25.6

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG   52 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~   52 (78)
                      ..++.++.|+||.+...++..+ |+|..++.
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~V-AVKVqrPg  160 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEV-AVKVQRPG  160 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEE-EEEecCCC
Confidence            5678899999999999887777 99998665

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=92.34  E-value=0.067  Score=32.07  Aligned_cols=59  Identities=20%  Similarity=0.298  Sum_probs=38.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHH-HHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI-FVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~l~h~niv~l   78 (78)
                      ..|.....+|.|+|+.+-.+.+......+++|.+...    ......++.++ ....|+|++++
T Consensus       322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~  381 (612)
T KOG0603|consen  322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKS  381 (612)
T ss_pred             hhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceee
Confidence            4566667799999999888877655544588887443    12233455443 34579998863

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=91.33  E-value=0.013  Score=32.08  Aligned_cols=54  Identities=17%  Similarity=0.192  Sum_probs=35.2

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEcc--CCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLS--KGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~--~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+.....|..|+|++... .+ ..|.+.  ..+.....+|..|...++...||||.+
T Consensus       196 tkl~e~hsgelwrgrwqgn-di-vakil~vr~~t~risrdfneefp~lrifshpnilp  251 (448)
T KOG0195|consen  196 TKLAESHSGELWRGRWQGN-DI-VAKILNVREVTARISRDFNEEFPALRIFSHPNILP  251 (448)
T ss_pred             hhhccCCCcccccccccCc-ch-hhhhhhhhhcchhhcchhhhhCcceeeecCCchhh
Confidence            4455666788888887543 33 344442  223334567888888888888999875

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=91.06  E-value=0.032  Score=32.66  Aligned_cols=63  Identities=19%  Similarity=0.226  Sum_probs=43.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|+...++|.|+|+.++..........+++|.+...+ ........+++..+..+.|+++++
T Consensus        48 a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~  111 (516)
T KOG1033|consen   48 ANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKR  111 (516)
T ss_pred             hccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhh
Confidence            367888999999999999987655433334788774332 223345667777777888887764

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=90.15  E-value=1.7  Score=22.76  Aligned_cols=52  Identities=17%  Similarity=0.143  Sum_probs=34.2

Q ss_pred             ccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCc
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRL   74 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~n   74 (78)
                      .....+++|.++.||.+.+... .. ++|.-+..+  ....+..|++++..+...+
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~-~~-a~Kvrr~ds--~r~~l~kEakiLeil~g~~   76 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGG-EV-ALKVRRRDS--PRRNLEKEAKILEILAGEG   76 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCc-eE-EEEEecCCc--chhhHHHHHHHHHHhhhcC
Confidence            4457789999999999987543 34 666653322  2455777888777665443

>cd05151 ChoK Choline Kinase (ChoK)

Probab=89.22  E-value=1.6  Score=21.29  Aligned_cols=50  Identities=16%  Similarity=0.080  Sum_probs=30.7

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCc
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRL   74 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~n   74 (78)
                      ..++.|.++.+|..... +..+ ++|....... ....+..|+..+..+.+.+
T Consensus         4 ~~l~~G~~~~vy~~~~~-~~~~-~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~   53 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA-NKKY-VVRIPGNGTE-LLINRENEAENSKLAAEAG   53 (170)
T ss_pred             eecCCcccCceEEEEEC-CeEE-EEEeCCCCcc-cccCHHHHHHHHHHHHHhC
Confidence            55788889999988764 3444 8887643321 1223556777776664433

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=88.95  E-value=2  Score=21.91  Aligned_cols=50  Identities=12%  Similarity=0.159  Sum_probs=33.4

Q ss_pred             eeeeecCCccEEEEEEcCCcEEEEEEEccCCcc-ccHHHHHHHHHHHHHcCC
Q 043701           22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-QGMEELKNEVTLIFVSNY   72 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h   72 (78)
                      ..++.|..+.+|+.....+... ++|....... .....+..|..++..+.+
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~-ilK~~~~~~~~~~~~~~~~E~~~~~~l~~   54 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRL-VLRRPPPGALLPSAHDVAREYRVLRALAG   54 (223)
T ss_pred             eecCCCccceEEEEEecCCcce-EEEeCCCcccCcccccHHHHHHHHHHhhC
Confidence            5578899999999877553444 7887643321 123457788888887754

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=85.90  E-value=0.91  Score=25.73  Aligned_cols=57  Identities=16%  Similarity=0.176  Sum_probs=33.4

Q ss_pred             ceeeeecCCccEEEEEEcCCcEEEEEEEccC--CccccHHHHHHHHHHHHHcCCCccccC
Q 043701           21 YNKLGEGRFGPVYKVILWHSVEIKSVKRLSK--GSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        21 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++.|.- .+..+.+.-....+++|....  .+....+.-.+|..++..+.|+|++++
T Consensus        22 L~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l   80 (369)
T KOG0665|consen   22 LKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISL   80 (369)
T ss_pred             ecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeee
Confidence            344455544 344444433333446666521  233345667788889999999999864

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=84.76  E-value=5  Score=22.34  Aligned_cols=33  Identities=24%  Similarity=0.267  Sum_probs=27.3

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRL   49 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~   49 (78)
                      .+.....||.|.++.||...+...+..+++|..
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf   45 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVF   45 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEE
Confidence            345568999999999999999876666699876

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=81.60  E-value=5.2  Score=24.64  Aligned_cols=48  Identities=15%  Similarity=-0.011  Sum_probs=27.6

Q ss_pred             cEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           31 PVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        31 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|+++....+..|++|+++............-++..+++.|.|+|++
T Consensus       291 Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~f  338 (655)
T KOG3741|consen  291 TTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPF  338 (655)
T ss_pred             eeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeeh
Confidence            467777654344448888732211111122334566788899999864

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=80.48  E-value=3  Score=27.92  Aligned_cols=59  Identities=15%  Similarity=0.150  Sum_probs=39.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEc-cCCccccHHHHHHHHHH--HHHcCCCcccc
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRL-SKGSRQGMEELKNEVTL--IFVSNYRLLLH   77 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~-~~~~~~~~~~~~~~~~~--~~~l~h~niv~   77 (78)
                      ++...+.+|.+.|-.+.++.++.|. + .+|.+ +.........|.+.++-  ...+.+||.++
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-v-VvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lP   85 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-V-VVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLP   85 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-E-EEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccc
Confidence            6677789999999999999987665 4 67776 33333344555544432  33457888764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	78
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-05
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		6e-05

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 2   ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGME-EL 60
           +L  F    +  A+DNFS+ N LG G FG VYK  L     + +VKRL +   QG E + 
Sbjct: 24  QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV-AVKRLKEERXQGGELQF 82
Query: 61  KNEVTLIFVSNYRLLLHM 78
           + EV +I ++ +R LL +
Sbjct: 83  QTEVEMISMAVHRNLLRL 100

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 2  ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGME-EL 60
          +L  F    +  A+DNF + N LG G FG VYK  L     + +VKRL +   QG E + 
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLV-AVKRLKEERTQGGELQF 74
Query: 61 KNEVTLIFVSNYRLLLHM 78
          + EV +I ++ +R LL +
Sbjct: 75 QTEVEMISMAVHRNLLRL 92

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	78
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	6e-18
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	8e-17
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-13
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	3e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	4e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-04
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-04
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 74.2 bits (183), Expect = 6e-18
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 6  FDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGME-ELKNEV 64
          F    +  A+DNFS+ N LG G FG VYK  L     + +VKRL +   QG E + + EV
Sbjct: 20 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV-AVKRLKEERTQGGELQFQTEV 78

Query: 65 TLI 67
           +I
Sbjct: 79 EMI 81

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 71.5 bits (176), Expect = 8e-17
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)

Query: 6  FDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVT 65
               + +AT+NF     +G G FG VYK +L    ++ ++KR +  S QG+EE + E+ 
Sbjct: 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIE 87

Query: 66 LI 67
           +
Sbjct: 88 TL 89

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 62.6 bits (153), Expect = 1e-13
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 12/72 (16%)

Query: 6  FDFARIAKATDNFSS------YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG----SRQ 55
          F F  +   T+NF         NK+GEG FG VYK  + ++  + +VK+L+      + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTV-AVKKLAAMVDITTEE 72

Query: 56 GMEELKNEVTLI 67
            ++   E+ ++
Sbjct: 73 LKQQFDQEIKVM 84

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 42.9 bits (101), Expect = 1e-06
 Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 5  EFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEV 64
          E   +  +   DN      +G GR+G VYK        + +VK  S  +RQ      NE 
Sbjct: 2  EAAASEPSLDLDNLKLLELIGRGRYGAVYKGS-LDERPV-AVKVFSFANRQ---NFINEK 56

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 42.0 bits (99), Expect = 3e-06
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 5  EFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEV 64
          +     +   +           GRFG V+K     +  + +VK      +Q  +  + EV
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFGCVWKAQ-LLNEYV-AVKIFPIQDKQSWQN-EYEV 69

Query: 65 TLI 67
            +
Sbjct: 70 YSL 72

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 24 LGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTL 66
          LG+G +G VY      +    ++K + +   +  + L  E+ L
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIAL 72

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 36.0 bits (82), Expect = 4e-04
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 1/66 (1%)

Query: 14 ATDNFSSYNKLGEGRFGPVYKVILWH-SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNY 72
           T+      K+GEG FG V++ I  H  V IK +         G  +   E  L  +   
Sbjct: 18 PTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77

Query: 73 RLLLHM 78
          + L  +
Sbjct: 78 KELSLL 83

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 35.4 bits (82), Expect = 5e-04
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH 77
          KLGEG F  V  V   H     ++KR+    +Q  EE + E  +     +RL  H
Sbjct: 36 KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADM-----HRLFNH 85

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 35.4 bits (82), Expect = 5e-04
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query: 15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVT 65
               SY K+GEG  G V      HS    +VK +    +Q  E L NEV 
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVV 94

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 35.0 bits (81), Expect = 8e-04
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKGSRQGMEELKNEVTLI 67
           NF    K+G G+F  VY+         V +K V+       +   +   E+ L+
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 35.0 bits (81), Expect = 8e-04
 Identities = 14/71 (19%), Positives = 25/71 (35%), Gaps = 12/71 (16%)

Query: 2  ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKS-----VKRLSKGSRQG 56
           +       I           +LGEG FG V+     + +  +      VK L + S   
Sbjct: 34 CVHHIKRRDIVLK-------WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA 86

Query: 57 MEELKNEVTLI 67
           ++ + E  L+
Sbjct: 87 RQDFQREAELL 97

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 35.0 bits (81), Expect = 8e-04
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 7/63 (11%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNE 63
            F  + +            LG+G FG   KV    + E+  +K L +   +       E
Sbjct: 5  RIFRPSDLIHG-------EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKE 57

Query: 64 VTL 66
          V +
Sbjct: 58 VKV 60

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	78
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.54
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.54
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.52
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.51
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.48
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.48
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.47
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.47
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.46
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.45
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.44
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.39
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.33
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.3
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.29
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.28
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.25
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.23
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.22
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.21
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.2
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.19
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.19
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.19
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.16
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.15
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.15
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.14
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.14
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.14
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.14
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.13
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.13
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.12
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.11
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.11
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.11
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.11
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.1
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.1
3uqc_A	286	Probable conserved transmembrane protein; structur	99.1
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.1
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.09
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.09
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.08
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.08
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.07
3niz_A	311	Rhodanese family protein; structural genomics, str	99.07
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.06
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.06
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.06
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.06
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.06
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.05
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.05
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.05
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.04
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.04
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.04
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.03
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.03
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.03
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.03
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.03
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.03
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.03
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.03
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.02
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.02
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.02
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.02
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.02
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.02
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.01
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.01
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.01
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.01
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.01
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.01
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.01
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	98.99
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	98.99
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.99
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	98.99
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	98.99
3ork_A	311	Serine/threonine protein kinase; structural genomi	98.98
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	98.98
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	98.98
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	98.98
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	98.98
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	98.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	98.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	98.97
3bhy_A	283	Death-associated protein kinase 3; death associate	98.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.96
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	98.96
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	98.96
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	98.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	98.96
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.96
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	98.95
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	98.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	98.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	98.95
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	98.95
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	98.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	98.94
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	98.94
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	98.94
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	98.94
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	98.94
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	98.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	98.94
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	98.93
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	98.93
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	98.93
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	98.93
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	98.92
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	98.92
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	98.92
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	98.92
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	98.91
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	98.91
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	98.91
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	98.91
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	98.91
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	98.91
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	98.91
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.91
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	98.9
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.9
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.9
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	98.9
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.89
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	98.89
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	98.89
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.89
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	98.89
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	98.89
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	98.89
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	98.89
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	98.88
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	98.88
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	98.88
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	98.88
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	98.87
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.87
2a19_B	284	Interferon-induced, double-stranded RNA-activated	98.87
3soc_A	322	Activin receptor type-2A; structural genomics cons	98.86
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	98.86
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	98.86
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	98.86
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	98.86
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	98.86
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	98.86
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	98.85
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	98.85
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	98.85
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	98.84
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	98.84
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	98.84
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	98.83
3an0_A	340	Dual specificity mitogen-activated protein kinase;	98.82
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	98.82
3aln_A	327	Dual specificity mitogen-activated protein kinase;	98.81
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	98.81
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	98.8
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	98.8
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	98.8
3fme_A	290	Dual specificity mitogen-activated protein kinase;	98.8
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	98.78
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	98.78
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	98.78
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	98.77
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	98.77
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	98.77
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	98.77
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.77
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	98.76
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	98.76
3q4u_A	301	Activin receptor type-1; structural genomics conso	98.76
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	98.76
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	98.76
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	98.76
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.75
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	98.74
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	98.73
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	98.73
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	98.72
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	98.72
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.71
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.71
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.7
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	98.69
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.69
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.68
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	98.68
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.67
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.67
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.66
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	98.65
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	98.64
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	98.62
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.59
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	98.58
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	98.58
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	98.57
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	98.56
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.54
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.54
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	98.52
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	98.52
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.48
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.47
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	98.44
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	98.44
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	98.43
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.42
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.39
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	98.39
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.35
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.34
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	98.32
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.29
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.27
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.25
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.12
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.11
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.55
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.69
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	93.61
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	92.48
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	92.47
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	89.6
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	84.84
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	84.17

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.54  E-value=2.1e-14  Score=76.14  Aligned_cols=63  Identities=21%  Similarity=0.342  Sum_probs=51.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++...+.||+|+||.||++.+..     ....+|+|.+........+.|.+|+.++.+++|||||++
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l  108 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF  108 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            456677889999999999998642     345569999976655566789999999999999999974

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.54  E-value=2.2e-14  Score=75.27  Aligned_cols=63  Identities=22%  Similarity=0.361  Sum_probs=49.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||++.+..     ....+|+|.+........+.|.+|+.++.+++|||||++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l   80 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF   80 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccE
Confidence            567888999999999999998642     245569999976555556789999999999999999974

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.52  E-value=2.9e-14  Score=76.09  Aligned_cols=63  Identities=25%  Similarity=0.302  Sum_probs=52.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|+..+.||+|+||.||.+.....+..+|+|.+........+.+.+|+.++..++|+|||++
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l  136 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM  136 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcE
Confidence            458888999999999999999887666679999865444456678899999999999999974

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.51  E-value=6.3e-14  Score=76.42  Aligned_cols=63  Identities=25%  Similarity=0.302  Sum_probs=53.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|...+.||+|+||.||.+.....+..+|+|.+........+.+.+|+.++..++|+|||++
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l  213 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM  213 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCce
Confidence            458888999999999999999887666679999865544556778999999999999999974

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.48  E-value=1.1e-13  Score=74.05  Aligned_cols=64  Identities=20%  Similarity=0.280  Sum_probs=46.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|||||++
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~   88 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY   88 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcE
Confidence            35788899999999999999998766666699998543  33345679999999999999999974

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.48  E-value=6e-14  Score=73.60  Aligned_cols=63  Identities=19%  Similarity=0.209  Sum_probs=49.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||.+.....+..+|+|.+... .....+.+.+|+.++..++|||||++
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~   68 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY   68 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            3588889999999999999998765666699988533 23344678999999999999999874

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.47  E-value=2e-13  Score=71.00  Aligned_cols=63  Identities=17%  Similarity=0.273  Sum_probs=47.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..+|+|.+...   .......+.+|+.++..++||||+++
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~   78 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL   78 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeE
Confidence            6799999999999999999998766666699998543   22334578999999999999999874

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.47  E-value=2.9e-13  Score=71.31  Aligned_cols=63  Identities=25%  Similarity=0.321  Sum_probs=47.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +++...+.||+|+||.||+|.+..     ....+|+|.+... .....+.|.+|+.++.+++|||||++
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l   94 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL   94 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            345667889999999999998632     3345699998543 33345789999999999999999974

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.46  E-value=3.2e-13  Score=73.23  Aligned_cols=63  Identities=11%  Similarity=0.218  Sum_probs=51.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+|||++
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l  118 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI  118 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceE
Confidence            4688899999999999999998766666799998543  23345678899999999999999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.45  E-value=3.1e-13  Score=70.69  Aligned_cols=60  Identities=15%  Similarity=0.163  Sum_probs=48.5

Q ss_pred             ccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .....||+|+||.||++........+|+|.+...  .....+.|.+|+.++..++|||||++
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~   90 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF   90 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            5567899999999999998866666699988532  33345679999999999999999974

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.44  E-value=1.3e-13  Score=72.76  Aligned_cols=63  Identities=17%  Similarity=0.219  Sum_probs=52.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..+|+|.+...   .....+.+.+|+.++..++|||||++
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l   97 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL   97 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            4688999999999999999998876667799998532   22345678999999999999999974

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.39  E-value=1.3e-12  Score=73.47  Aligned_cols=64  Identities=20%  Similarity=0.268  Sum_probs=53.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||++.....+..+|+|.+........+.+.+|+.+|..++||||+++
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l  219 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL  219 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeE
Confidence            3578889999999999999999887666679999865555556778899999999999999874

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.33  E-value=4.9e-12  Score=67.74  Aligned_cols=69  Identities=19%  Similarity=0.296  Sum_probs=52.7

Q ss_pred             hHHHhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCC-CccccC
Q 043701           10 RIAKATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNY-RLLLHM   78 (78)
Q Consensus        10 ~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h-~niv~l   78 (78)
                      +++...++|...+.||+|+||.||++....     ....+|+|.+... .....+.|.+|+.++.++.| +|||++
T Consensus        58 ~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            445566788899999999999999998653     2245599998643 33345679999999999965 899874

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.30  E-value=1.3e-11  Score=65.06  Aligned_cols=75  Identities=27%  Similarity=0.184  Sum_probs=57.3

Q ss_pred             eeeehhhHHHhhcC----------cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCC
Q 043701            4 WEFDFARIAKATDN----------FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYR   73 (78)
Q Consensus         4 ~~~~~~~~~~~~~~----------~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~   73 (78)
                      ..++++++..+++.          |.....||+|+||.||.+.....+..+|+|.+........+.+.+|+.++..+.|+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            44566777666643          56678999999999999998754555599998655445567789999999999999


Q ss_pred             ccccC
Q 043701           74 LLLHM   78 (78)
Q Consensus        74 niv~l   78 (78)
                      |++++
T Consensus       103 niv~~  107 (321)
T 2c30_A          103 NVVEM  107 (321)
T ss_dssp             TBCCE
T ss_pred             CcceE
Confidence            99863

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.29  E-value=3.7e-12  Score=67.13  Aligned_cols=61  Identities=23%  Similarity=0.370  Sum_probs=48.7

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+++...+.||+|+||.||+|.+..  .+ |+|.++..  .....+.|.+|+.++.+++|||||++
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~v-AvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l   97 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG--DV-AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLF   97 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS--EE-EEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC--cE-EEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            4567788999999999999998643  34 88888543  33345779999999999999999974

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.28  E-value=2.2e-12  Score=67.72  Aligned_cols=71  Identities=30%  Similarity=0.507  Sum_probs=56.9

Q ss_pred             ehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701            7 DFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus         7 ~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++.++...+++|.....||+|+||.||.+....+..+ ++|.+........+.+.+|+.++..++|+|++++
T Consensus        30 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~v-avK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  100 (321)
T 2qkw_B           30 PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKV-ALKRRTPESSQGIEEFETEIETLSFCRHPHLVSL  100 (321)
T ss_dssp             CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEE-EEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCE
T ss_pred             cHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEE-EEEEecccChHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3445556778899999999999999999987655555 9998865554556778999999999999999863

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.25  E-value=1.2e-11  Score=65.02  Aligned_cols=75  Identities=37%  Similarity=0.534  Sum_probs=59.0

Q ss_pred             ceeeehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701            3 LWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +..+++.++....++|...+.||+|+||.||.+....+..+ |+|.+.... ......+..|+.++..+.|+||+++
T Consensus        17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~v-avK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   92 (326)
T 3uim_A           17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLV-AVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL   92 (326)
T ss_dssp             CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCE-EEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred             cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEE-EEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence            45677888899999999999999999999999986555555 999885432 2223468899999999999999874

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.23  E-value=3.4e-11  Score=62.97  Aligned_cols=64  Identities=20%  Similarity=0.250  Sum_probs=53.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+........+++|.+........+.+.+|+.++..+.|+||+++
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   72 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF   72 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccE
Confidence            3568888999999999999999876566669998865555566789999999999999999863

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.22  E-value=1.1e-11  Score=66.10  Aligned_cols=58  Identities=14%  Similarity=0.084  Sum_probs=45.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+.....+..+|+|.++....     ..+|+.++..++|||||++
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l  115 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPL  115 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcE
Confidence            346667789999999999999876666669999854321     2368999999999999974

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.21  E-value=2.2e-10  Score=59.78  Aligned_cols=74  Identities=27%  Similarity=0.517  Sum_probs=58.4

Q ss_pred             ceeeehhhHHHhhcCcccc------eeeeecCCccEEEEEEcCCcEEEEEEEccCC----ccccHHHHHHHHHHHHHcCC
Q 043701            3 LWEFDFARIAKATDNFSSY------NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG----SRQGMEELKNEVTLIFVSNY   72 (78)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~------~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~l~h   72 (78)
                      ...|++.++..++++|...      +.||+|+||.||.+.. .+..+ ++|.+...    .....+.+.+|+.++..+.|
T Consensus        12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~v-avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEE-EEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceE-EEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            4677888999999998877      8999999999999986 34444 88887432    22235678899999999999


Q ss_pred             CccccC
Q 043701           73 RLLLHM   78 (78)
Q Consensus        73 ~niv~l   78 (78)
                      +|++++
T Consensus        90 ~~i~~~   95 (307)
T 2nru_A           90 ENLVEL   95 (307)
T ss_dssp             TTBCCE
T ss_pred             CCeEEE
Confidence            999863

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.20  E-value=2.1e-11  Score=64.06  Aligned_cols=58  Identities=19%  Similarity=0.211  Sum_probs=41.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHH--HHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKN--EVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~--~~~~~~~l~h~niv~l   78 (78)
                      +++...+.||+|+||.||++.+. +. .+|+|.+...   ..+.+..  |+..+..++|||||++
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~-g~-~VAvK~l~~~---~~~~~~~e~Ei~~~~~l~HpNIv~l   62 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWR-GE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF   62 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEET-TE-EEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CE-EEEEEEECcc---chhhHHHHHHHHHHhcCCCCCCCcE
Confidence            35677799999999999999874 44 4599998543   2333444  4444567899999974

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.19  E-value=9.9e-11  Score=61.10  Aligned_cols=65  Identities=14%  Similarity=0.310  Sum_probs=52.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+.....+..+++|.+........+.+.+|+.++..+.|+||+++
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   82 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY   82 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeE
Confidence            34678999999999999999998766555669998855444456778899999999999999863

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.19  E-value=1.9e-12  Score=68.16  Aligned_cols=63  Identities=22%  Similarity=0.350  Sum_probs=43.9

Q ss_pred             cCcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||.+...   .....+|+|.+...  .......+.+|+.++..++|||||++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l   91 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL   91 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeE
Confidence            46899999999999999999763   23456699998543  22234467889999999999999974

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.19  E-value=4.5e-11  Score=62.72  Aligned_cols=63  Identities=17%  Similarity=0.203  Sum_probs=50.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..+|+|.+... .....+.+.+|+.++..++|+||+++
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~   69 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRY   69 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCE
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeE
Confidence            4688889999999999999998755555699988533 33345778999999999999999863

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.16  E-value=1.3e-10  Score=60.39  Aligned_cols=64  Identities=17%  Similarity=0.336  Sum_probs=51.7

Q ss_pred             hcCcccceeeeecCCccEEEEEE----cCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVIL----WHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.+    ......+++|.+........+.+.+|+.++..++|+|++++
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   76 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY   76 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            35688889999999999999984    33455669999876555556778999999999999999863

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.15  E-value=3.9e-10  Score=60.59  Aligned_cols=65  Identities=22%  Similarity=0.274  Sum_probs=50.1

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ....+.|...+.||+|+||.||.+...   .....+|+|.+....  ....+.+|+.++..+ +|+||+++
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l   85 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGV   85 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCC
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceE
Confidence            345678999999999999999999764   234556999875432  345678899999888 69999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.15  E-value=2.3e-10  Score=59.48  Aligned_cols=66  Identities=18%  Similarity=0.371  Sum_probs=52.2

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|.....||.|+||.||.+.....+..+++|.+........+.+..|+.++..+.|+|++++
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   81 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKL   81 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeee
Confidence            355678899999999999999999876555669998865555556789999999999999999863

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.14  E-value=3.3e-10  Score=62.46  Aligned_cols=64  Identities=16%  Similarity=0.208  Sum_probs=51.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+||+++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l  126 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL  126 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            35688889999999999999998766666699998543  23345678899999999999999874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.14  E-value=2.4e-10  Score=60.55  Aligned_cols=66  Identities=17%  Similarity=0.247  Sum_probs=52.6

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|...+.||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+||+++
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l   79 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL   79 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3457899999999999999999998655555699988532  33345678899999999999999864

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.14  E-value=1.6e-10  Score=60.36  Aligned_cols=64  Identities=14%  Similarity=0.204  Sum_probs=48.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+........+++|.+........+.+.+|+.++..+.|+|++++
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   73 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKV   73 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEE
Confidence            4678889999999999999999876556669998865555556778999999999999999863

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.14  E-value=3.3e-10  Score=60.34  Aligned_cols=70  Identities=13%  Similarity=0.195  Sum_probs=54.7

Q ss_pred             hhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc-----------ccHHHHHHHHHHHHHcCCCccc
Q 043701            8 FARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-----------QGMEELKNEVTLIFVSNYRLLL   76 (78)
Q Consensus         8 ~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----------~~~~~~~~~~~~~~~l~h~niv   76 (78)
                      ..++....+.|...+.||+|+||.||.+....+..+ ++|.+.....           ...+.+.+|+.++..+.|+||+
T Consensus        14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~v-avK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPV-AIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEE-EEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeE-EEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            345667789999999999999999999988665555 9998743211           1126788999999999999998


Q ss_pred             cC
Q 043701           77 HM   78 (78)
Q Consensus        77 ~l   78 (78)
                      ++
T Consensus        93 ~~   94 (362)
T 3pg1_A           93 GL   94 (362)
T ss_dssp             CC
T ss_pred             ce
Confidence            64

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.13  E-value=1.5e-10  Score=63.47  Aligned_cols=63  Identities=13%  Similarity=0.244  Sum_probs=43.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||.|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+||+++
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l  117 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKV  117 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCce
Confidence            5688899999999999999998766666699988542  33345678899999999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.13  E-value=2e-10  Score=62.08  Aligned_cols=64  Identities=19%  Similarity=0.259  Sum_probs=52.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+++|.+..........+.+|+.++..+.|+||+++
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~  113 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL  113 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeE
Confidence            3568889999999999999999876666669998865444445678899999999999999863

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.12  E-value=3.5e-10  Score=58.70  Aligned_cols=63  Identities=21%  Similarity=0.357  Sum_probs=50.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+.....+..+|+|.+...  .......+.+|+.++..+.|+|++++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   66 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL   66 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeE
Confidence            4678889999999999999998766666699988533  22334678899999999999999863

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.11  E-value=2e-10  Score=61.02  Aligned_cols=71  Identities=18%  Similarity=0.289  Sum_probs=54.6

Q ss_pred             hhhHHHhhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701            8 FARIAKATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus         8 ~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ...+....++|...+.||+|+||.||.+...     .....+|+|.+... .....+.+.+|+.++..+ +|+||+++
T Consensus        14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            3455566788999999999999999999842     34456699998643 333456789999999999 78999863

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.11  E-value=1.5e-10  Score=59.63  Aligned_cols=65  Identities=14%  Similarity=0.266  Sum_probs=53.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+........+++|.+........+.+.+|+.++..+.|+|++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   71 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL   71 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeE
Confidence            44568888999999999999999876665558888865444456789999999999999999863

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.11  E-value=2.4e-10  Score=59.86  Aligned_cols=64  Identities=27%  Similarity=0.273  Sum_probs=50.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+++|.+........+.+.+|+.++..+.|+|++++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   91 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL   91 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeE
Confidence            3568889999999999999999865555669998855444556778899999999999999874

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.11  E-value=5.1e-10  Score=61.13  Aligned_cols=65  Identities=15%  Similarity=0.288  Sum_probs=53.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+||+++
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l   90 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL   90 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceE
Confidence            346789999999999999999998876666799998543  33345678899999999999999863

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.10  E-value=7.4e-10  Score=59.18  Aligned_cols=65  Identities=12%  Similarity=0.185  Sum_probs=52.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|.....||+|+||.||.+........+++|.+... .....+.+.+|+.++..+.|+||+++
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   90 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI   90 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccc
Confidence            446789999999999999999998766666699998643 22334678899999999999999864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.10  E-value=1.5e-10  Score=61.20  Aligned_cols=69  Identities=19%  Similarity=0.330  Sum_probs=54.6

Q ss_pred             hHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-----ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           10 RIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-----SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        10 ~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+....+.|...+.||+|+||.||.+........+++|.+...     .....+.+.+|+.++..++|+||+++
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~   93 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL   93 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCccee
Confidence            4456677899999999999999999998766666699987432     23345678999999999999999863

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.10  E-value=7.5e-10  Score=57.66  Aligned_cols=63  Identities=3%  Similarity=-0.129  Sum_probs=51.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+........+++|.+....   ....+.+.+|+..+..+.|+||+++
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~   96 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARV   96 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCccee
Confidence            56889999999999999999987655666999986432   2234678899999999999999863

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.10  E-value=3.4e-10  Score=58.94  Aligned_cols=64  Identities=16%  Similarity=0.245  Sum_probs=47.7

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--------------------------ccHHHHHHHHHHHH
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--------------------------QGMEELKNEVTLIF   68 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------------------------~~~~~~~~~~~~~~   68 (78)
                      .++|...+.||+|+||.||.+........+|+|.+.....                          ...+.+.+|+.++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4678999999999999999999876666669998843211                          11346889999999


Q ss_pred             HcCCCccccC
Q 043701           69 VSNYRLLLHM   78 (78)
Q Consensus        69 ~l~h~niv~l   78 (78)
                      .+.|+||+++
T Consensus        92 ~l~h~~iv~~  101 (298)
T 2zv2_A           92 KLDHPNVVKL  101 (298)
T ss_dssp             TCCCTTBCCE
T ss_pred             hCCCCCCCeE
Confidence            9999999863

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.09  E-value=3.4e-10  Score=60.62  Aligned_cols=65  Identities=17%  Similarity=0.235  Sum_probs=52.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|.||.||.+.....+..+++|.+...  .....+.+.+|+.++..+.|+||+++
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~   93 (362)
T 2bdw_A           27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL   93 (362)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            345788899999999999999998765556699988543  23345678899999999999999863

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.09  E-value=6.8e-10  Score=57.53  Aligned_cols=61  Identities=16%  Similarity=0.180  Sum_probs=47.1

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.....||+|+||.||.+........+++|.+........+.+.+|+.++..+.|+|++++
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   84 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQY   84 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            4444589999999999999876565669998865544456778899999999999999863

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.09  E-value=3.6e-10  Score=60.62  Aligned_cols=65  Identities=20%  Similarity=0.174  Sum_probs=52.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc------ccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR------QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+.....+..+|+|.+.....      ...+.+.+|+.++..+.|+||+++
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l   80 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITL   80 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcE
Confidence            55678999999999999999999876566669998854321      134678899999999999999863

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.09  E-value=1.8e-10  Score=63.19  Aligned_cols=65  Identities=22%  Similarity=0.374  Sum_probs=52.6

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....++|...+.||+|+||.||.+....+..+ |+|.+.... ...+.+.+|+.++..++|+||+++
T Consensus       184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~v-avK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l  248 (454)
T 1qcf_A          184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKL  248 (454)
T ss_dssp             BCCGGGEEEEEEEECCSSEEEEEEEETTTEEE-EEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             eechHHeEEEEEcccCCceEEEEEEECCccEE-EEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeE
Confidence            34456788889999999999999998665555 999986533 346789999999999999999864

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.08  E-value=7.4e-10  Score=58.73  Aligned_cols=65  Identities=17%  Similarity=0.192  Sum_probs=52.4

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|.....||+|+||.||.+.....+..+++|.+... .......+.+|+.++..+.|+|++++
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   74 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI   74 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCe
Confidence            457899999999999999999998765666699988543 22334568899999999999999863

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.08  E-value=4.7e-10  Score=58.92  Aligned_cols=64  Identities=13%  Similarity=0.142  Sum_probs=51.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+.... ....+.+.+|+.++..+.|+|++++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   72 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL   72 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceE
Confidence            356888899999999999999987655566999985432 2345678899999999999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.08  E-value=9.2e-10  Score=58.10  Aligned_cols=64  Identities=20%  Similarity=0.300  Sum_probs=51.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+.....+..+++|.+... ......+.+|+.++..++|+||+++
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~   66 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHL   66 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCE
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeE
Confidence            346788899999999999999998876666699987543 2334568899999999999999863

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.07  E-value=8.9e-10  Score=59.17  Aligned_cols=65  Identities=17%  Similarity=0.226  Sum_probs=48.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|.....||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..+.|+||+++
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~   93 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL   93 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            346788999999999999999998766666699998542  23345678899999999999999864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.07  E-value=6.7e-10  Score=58.30  Aligned_cols=64  Identities=19%  Similarity=0.294  Sum_probs=49.4

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+....+..+ |+|.+...  .......+.+|+.++..++|+||+++
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~v-avK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   84 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIV-ALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL   84 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEE-EEEEEC------CHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEE-EEEEEecccccchhhHHHHHHHHHHHHcCCCCEeee
Confidence            446788899999999999999998665544 99988533  22234678899999999999999863

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.06  E-value=6.7e-10  Score=59.57  Aligned_cols=65  Identities=14%  Similarity=0.189  Sum_probs=45.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|.....||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+||+++
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l   89 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL   89 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCC
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCc
Confidence            346788899999999999999998765555699988432  22335678899999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.06  E-value=3e-10  Score=61.05  Aligned_cols=58  Identities=26%  Similarity=0.284  Sum_probs=42.8

Q ss_pred             ceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           21 YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        21 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.||+|+||.||.+.....+..+++|.+........+.+.+|+.++..++|+||+++
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~  151 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL  151 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeE
Confidence            4679999999999999876555569999866554556779999999999999999863

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.06  E-value=9.2e-10  Score=60.44  Aligned_cols=64  Identities=20%  Similarity=0.304  Sum_probs=51.3

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|.....||+|+||.||.+.......+ |+|.+.... ...+.+.+|+.++..++|+||+++
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~v-avK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~  244 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL  244 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEE-EEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECCCceE-EEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeE
Confidence            3445677889999999999999998765554 999986533 235679999999999999999863

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.06  E-value=6e-10  Score=61.82  Aligned_cols=64  Identities=22%  Similarity=0.331  Sum_probs=51.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+|...+.||+|+||.||.+........+|+|.+.... ...+.|.+|+.++..++|+||+++
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l  281 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQL  281 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeE
Confidence            3456777899999999999999987655556999986432 246779999999999999999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.06  E-value=2e-10  Score=61.75  Aligned_cols=65  Identities=14%  Similarity=0.221  Sum_probs=51.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+........+|+|.+... .......+.+|+.++..+.|+||+++
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  177 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL  177 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            345677889999999999999998755555699988543 22334568899999999999999863

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.06  E-value=6.4e-10  Score=60.56  Aligned_cols=66  Identities=15%  Similarity=0.237  Sum_probs=50.8

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--------cccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--------RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|...+.||+|+||.||.+........+|+|.+....        ......+.+|+.++..+.|+||+++
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l  205 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI  205 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCC
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeE
Confidence            45678999999999999999999987666666999874321        1112347899999999999999874

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.06  E-value=4.7e-10  Score=61.65  Aligned_cols=65  Identities=14%  Similarity=0.247  Sum_probs=50.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+.....+..+++|.+...  .....+.+.+|+.++..++||||+++
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l   75 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRL   75 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeE
Confidence            456788999999999999999998766666699988543  23345678899999999999999864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.06  E-value=5.8e-10  Score=58.86  Aligned_cols=64  Identities=20%  Similarity=0.277  Sum_probs=48.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+........+|+|.+.... ....+.+.+|+.++..+.|+||+++
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~   70 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF   70 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeE
Confidence            357889999999999999999987655566999885332 2234568899999999999999863

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.06  E-value=5e-10  Score=58.43  Aligned_cols=65  Identities=18%  Similarity=0.247  Sum_probs=49.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+.....+..+++|.+..........+.+|+.++..+.|+|++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL   71 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCE
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeeh
Confidence            44578889999999999999999875555569998865433345668899999999999999863

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.05  E-value=1.8e-09  Score=57.39  Aligned_cols=64  Identities=22%  Similarity=0.251  Sum_probs=51.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|.....||.|+||.||.+.....+..+++|.+...  .......+.+|+.++..+.|+|++++
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   88 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL   88 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccH
Confidence            46788899999999999999998766666699988543  22234668899999999999999864

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.05  E-value=6.3e-10  Score=58.76  Aligned_cols=65  Identities=18%  Similarity=0.221  Sum_probs=51.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc------ccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR------QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+.....+..+++|.+.....      ...+.+.+|+.++..+.|+||+++
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   79 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL   79 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcE
Confidence            34568888999999999999999876555669998743211      135678899999999999999863

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.05  E-value=6.5e-10  Score=57.51  Aligned_cols=64  Identities=22%  Similarity=0.339  Sum_probs=50.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc-------cHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ-------GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+........+++|.+......       ..+.+.+|+.++..++|+|++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   88 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL   88 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhh
Confidence            36788899999999999999998765566699988533211       11678899999999999999863

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.05  E-value=6.9e-10  Score=59.98  Aligned_cols=64  Identities=13%  Similarity=0.142  Sum_probs=51.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+.... ....+.+.+|+.++..++|+||+++
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~   72 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL   72 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeE
Confidence            356888899999999999999987655566999985432 2345678899999999999999863

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.05  E-value=2e-09  Score=57.76  Aligned_cols=64  Identities=22%  Similarity=0.251  Sum_probs=51.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|.....||+|+||.||.+.....+..+|+|.+...  .......+.+|+.++..+.|+|++++
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~  106 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGL  106 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhh
Confidence            46788889999999999999998766666699988543  22335678899999999999999864

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.05  E-value=6.7e-10  Score=57.46  Aligned_cols=64  Identities=17%  Similarity=0.206  Sum_probs=50.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCc-------EEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSV-------EIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-------~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+......       ..+++|.+........+.+.+|+.++..++|+||+++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   77 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLN   77 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCE
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEE
Confidence            356888899999999999999865322       3458998865555556789999999999999999863

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.04  E-value=1.3e-09  Score=56.95  Aligned_cols=63  Identities=17%  Similarity=0.304  Sum_probs=50.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..+++|.+....  ....+.+.+|+.++..++|+|++++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   67 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL   67 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccch
Confidence            56888899999999999999987655566999874432  2234567889999999999999863

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.04  E-value=1e-09  Score=58.58  Aligned_cols=63  Identities=21%  Similarity=0.344  Sum_probs=49.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+.....+..+++|.+....   ....+.+.+|+.++..++|+|++++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  119 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY  119 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            34777899999999999999986666666999885332   2234568899999999999999863

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.04  E-value=1.1e-09  Score=56.52  Aligned_cols=65  Identities=17%  Similarity=0.235  Sum_probs=51.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+.....+..+++|.+...  .....+.+.+|+.++..+.|+|++++
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   70 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL   70 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeE
Confidence            346788999999999999999998765555699987432  23344668899999999999999863

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.04  E-value=8.5e-10  Score=59.07  Aligned_cols=63  Identities=17%  Similarity=0.230  Sum_probs=51.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+........+|+|.+..... ....+.+|+..+..++|+||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~   81 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRF   81 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcE
Confidence            4678899999999999999999876666669998854322 23568899999999999999863

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.04  E-value=1.5e-09  Score=55.76  Aligned_cols=62  Identities=16%  Similarity=0.339  Sum_probs=50.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+....+..+ ++|.+.... ...+.+.+|+.++..+.|+|++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~v-avK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~   70 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQL   70 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEE-EEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeE-EEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeE
Confidence            35688889999999999999998765555 999886433 234678999999999999999863

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.04  E-value=1.2e-09  Score=61.15  Aligned_cols=64  Identities=20%  Similarity=0.304  Sum_probs=51.3

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|.....||+|.||.||.+.......+ |+|.+.... ...+.|.+|+.++..++|+||+++
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~v-avK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~  327 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQL  327 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTEEE-EEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cchhhhhhheecccCCCeEEEEEEECCCceE-EEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeE
Confidence            3445677889999999999999998765554 999986533 235679999999999999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.04  E-value=1.8e-10  Score=62.71  Aligned_cols=65  Identities=20%  Similarity=0.278  Sum_probs=51.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+.....+..+|+|.+...   .......+..|..++..++|+||+++
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l  134 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL  134 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCE
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            446789999999999999999998876666799987432   11223457889999999999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.04  E-value=4.2e-10  Score=60.87  Aligned_cols=64  Identities=20%  Similarity=0.349  Sum_probs=51.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|.....||+|+||.||.+.....+..+|+|.+...   .......+.+|+.++..+.|+||+++
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l   80 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL   80 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            35688899999999999999998876666799987432   22345678899999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.03  E-value=3.4e-10  Score=58.52  Aligned_cols=68  Identities=21%  Similarity=0.301  Sum_probs=54.4

Q ss_pred             hHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           10 RIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        10 ~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+....++|.....||+|+||.||.+........+++|.+... ....+.+.+|+.++..++|+|++++
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~   74 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL   74 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3344567788899999999999999998765666699988543 2345678899999999999999863

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.03  E-value=3.4e-10  Score=59.45  Aligned_cols=72  Identities=21%  Similarity=0.353  Sum_probs=54.4

Q ss_pred             eeehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701            5 EFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .+++..+....+.|...+.||.|+||.||.+.....+..+++|.+.... .....+.+|+..+..+ .|+|+++
T Consensus        13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~   85 (326)
T 2x7f_A           13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIAT   85 (326)
T ss_dssp             ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCC
T ss_pred             hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeee
Confidence            3444555567788999999999999999999986555555999885432 2346788999999998 7999986

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.03  E-value=3.4e-10  Score=59.53  Aligned_cols=64  Identities=17%  Similarity=0.260  Sum_probs=38.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+++|.+... .....+.+.+|+.++..+.|+||+++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   68 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL   68 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceE
Confidence            45788889999999999999988765566699988543 22334678899999999999999863

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.03  E-value=1.8e-09  Score=57.87  Aligned_cols=64  Identities=16%  Similarity=0.205  Sum_probs=51.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+........+|+|.+...  .......+.+|+.++..+.|+||+++
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~   89 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGL   89 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccce
Confidence            46789999999999999999998766666699988532  23344668899999999999999863

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.03  E-value=2.5e-10  Score=62.62  Aligned_cols=67  Identities=19%  Similarity=0.302  Sum_probs=52.3

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....++|...+.||+|+||.||.+........+|+|.+...   .......+..|..++..++|+||+++
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l  139 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL  139 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCE
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            34457899999999999999999999876777799988432   11223347889999999999999864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.03  E-value=3.5e-10  Score=59.40  Aligned_cols=66  Identities=21%  Similarity=0.247  Sum_probs=45.9

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcE---EEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVE---IKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~---~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|...+.||+|+||.||.+.......   .+++|.+...  .....+.+.+|+.++..++|+|++++
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   90 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL   90 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehh
Confidence            345678999999999999999998754332   4599988543  33345779999999999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.03  E-value=5.5e-10  Score=59.53  Aligned_cols=64  Identities=19%  Similarity=0.276  Sum_probs=50.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-----ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-----SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+...     .....+.+.+|+.++..++|+||+++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~   91 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL   91 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcE
Confidence            35688899999999999999998765556699987422     11235678999999999999999863

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.03  E-value=1.6e-09  Score=55.85  Aligned_cols=64  Identities=19%  Similarity=0.261  Sum_probs=51.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|.....||+|+||.||.+.....+..+++|.+...  .....+.+..|+..+..++|+|++++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   70 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY   70 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeE
Confidence            45788899999999999999998765556699988543  23345678899999999999999863

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.02  E-value=5.1e-10  Score=61.81  Aligned_cols=65  Identities=20%  Similarity=0.275  Sum_probs=51.7

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|.....||+|+||.||.+.....+..+|+|.+...  .......+.+|+.++..++||||+++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~   86 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL   86 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeE
Confidence            345688899999999999999998765556699987432  22345678999999999999999864

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.02  E-value=5.8e-10  Score=59.98  Aligned_cols=63  Identities=19%  Similarity=0.274  Sum_probs=46.8

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....+.|...+.||+|+||.||.+.....+..+|+|.+....    ....+|+.++..++|+||+++
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l   65 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKL   65 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCE
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccch
Confidence            445678999999999999999999987655666999874321    122368899999999999863

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.02  E-value=8.8e-10  Score=57.16  Aligned_cols=62  Identities=16%  Similarity=0.289  Sum_probs=48.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+....+..+ ++|.+....  ......+.+|+.++..+.|+||+++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~-aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   65 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETF-ALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL   65 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEE-EEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCE
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEE-EEEEEeccccccccchhHHHHHHHHHhcCCCCEeee
Confidence            4677889999999999999988555555 999885432  2234678899999999999999863

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.02  E-value=1.2e-09  Score=60.65  Aligned_cols=65  Identities=22%  Similarity=0.294  Sum_probs=49.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc-------------ccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-------------QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+........+|+|.+.....             ...+.+.+|+.++..++||||+++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  111 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL  111 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            45678899999999999999999876666669998753211             234568899999999999999864

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.02  E-value=1.1e-09  Score=57.76  Aligned_cols=63  Identities=16%  Similarity=0.317  Sum_probs=51.0

Q ss_pred             cCcccceeeeecCCccEEEEEE----cCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVIL----WHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+.+    ......+++|.+........+.+.+|+.++..+.|+|++++
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   89 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY   89 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEE
Confidence            5688899999999999999984    33445569999866555556778999999999999999863

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.02  E-value=1.2e-09  Score=58.84  Aligned_cols=64  Identities=16%  Similarity=0.139  Sum_probs=51.3

Q ss_pred             hcCcccceeeeec--CCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEG--RFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g--~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|  +||.||.+.....+..+|+|.+...  .....+.+.+|+.++..+.|+||+++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   91 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY   91 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            4568899999999  9999999998765556699988543  23334668889999999999999864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.01  E-value=1.2e-09  Score=58.51  Aligned_cols=63  Identities=27%  Similarity=0.261  Sum_probs=48.4

Q ss_pred             cCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+...     .....+|+|.+... .......+..|+.++..++|+||+++
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~  139 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC  139 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeE
Confidence            55778899999999999999843     23345599998543 33345578899999999999999863

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.01  E-value=5.6e-10  Score=59.41  Aligned_cols=64  Identities=20%  Similarity=0.264  Sum_probs=50.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+|+|.+...   .......+..|+.++..+.|+|++++
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l   70 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL   70 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcce
Confidence            35788889999999999999998766666699988532   22345668889999999999999863

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.01  E-value=9.1e-10  Score=57.88  Aligned_cols=63  Identities=19%  Similarity=0.153  Sum_probs=50.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ..|...+.||+|+||.||.+........+++|.+..........+.+|+..+..+. |+||+++
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~   91 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF   91 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhc
Confidence            46788899999999999999987555566999875444445567889999999995 9999863

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.01  E-value=9.3e-10  Score=57.05  Aligned_cols=65  Identities=26%  Similarity=0.316  Sum_probs=51.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+........+++|.+... .....+.+..|+.++..+.|+||+++
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   85 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKI   85 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhH
Confidence            345688899999999999999998765555588887543 23345778899999999999999863

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.01  E-value=1.3e-09  Score=57.37  Aligned_cols=62  Identities=18%  Similarity=0.349  Sum_probs=50.1

Q ss_pred             cCcccceeeeecCCccEEEEEE----cCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVIL----WHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      +.|...+.||+|+||.||.+..    ...+..+++|.+........+.+.+|+.++..+.|+|+++
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~  106 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK  106 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCC
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeee
Confidence            4578889999999999999984    2344556999986655555677999999999999999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.01  E-value=2.6e-09  Score=56.44  Aligned_cols=65  Identities=20%  Similarity=0.318  Sum_probs=51.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+....     ....+++|.+... .....+.+.+|+.++..+.|+||+++
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~  115 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL  115 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            44778899999999999999998753     2355699998643 23335678999999999999999863

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.01  E-value=9.1e-10  Score=58.15  Aligned_cols=66  Identities=27%  Similarity=0.370  Sum_probs=49.5

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|...+.||+|+||.||.+........+++|.+....  ......+.+|+.++..+.|+||+++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   98 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL   98 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceE
Confidence            34467899999999999999999987666667999985432  2224557789999999999999863

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.00  E-value=7.4e-10  Score=59.03  Aligned_cols=63  Identities=17%  Similarity=0.241  Sum_probs=44.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|.....||+|+||.||.+........+++|.+....  ..+.+..|+.++..+.|+||+++
T Consensus        51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~  113 (349)
T 2w4o_A           51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKL  113 (349)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCE
T ss_pred             ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcce
Confidence            3456888899999999999999987655556999885432  24567789999999999999863

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.00  E-value=1e-09  Score=56.53  Aligned_cols=65  Identities=22%  Similarity=0.356  Sum_probs=51.7

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....+.|...+.||+|+||.||.+....+..+ ++|.+.... ...+.+..|+.++..+.|+|++++
T Consensus         9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~v-avK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~   73 (279)
T 1qpc_A            9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL   73 (279)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEETTTEEE-EEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccCHHhhhheeeecCCCCeEEEEEEEcCCcEE-EEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceE
Confidence            34456788899999999999999987655555 999885432 235678999999999999999863

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.00  E-value=7e-10  Score=59.63  Aligned_cols=63  Identities=19%  Similarity=0.249  Sum_probs=48.3

Q ss_pred             cCcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+...   .....+++|.+... .....+.+.+|+.++..+.|+||+++
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~  111 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL  111 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            46788899999999999999865   23334599988543 33345679999999999999999863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.00  E-value=1.4e-09  Score=56.66  Aligned_cols=64  Identities=16%  Similarity=0.149  Sum_probs=50.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+........+++|.+...   .....+.+.+|+..+..++|+|++++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~   76 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM   76 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceE
Confidence            35688899999999999999998765555699987432   22334678899999999999999863

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.00  E-value=1e-09  Score=57.95  Aligned_cols=63  Identities=14%  Similarity=0.155  Sum_probs=48.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+....   ....+++|.+... .....+.+.+|+.++..++|+||+++
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  115 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL  115 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            456778999999999999998753   2234599988643 33345678999999999999999863

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.00  E-value=1.4e-09  Score=57.75  Aligned_cols=64  Identities=14%  Similarity=0.253  Sum_probs=50.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+...  .......+.+|+.++..+.|+|++++
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   81 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL   81 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccH
Confidence            46688899999999999999998765555699987433  22234567899999999999999863

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=98.99  E-value=5.9e-10  Score=59.30  Aligned_cols=64  Identities=16%  Similarity=0.269  Sum_probs=50.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+...   .......+.+|+.++..++|+||+++
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l   74 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL   74 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeE
Confidence            36788999999999999999998765556699987432   11223568899999999999999864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=98.99  E-value=2.8e-09  Score=54.69  Aligned_cols=63  Identities=21%  Similarity=0.303  Sum_probs=50.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|.....||+|+||.||.+....+..+ ++|.+..... ..+.+.+|+..+..+.|+|++++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~v-avK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~   68 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKF   68 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEE-EEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeE-EEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeE
Confidence            345688889999999999999987765555 9998854332 34678999999999999999863

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.99  E-value=9.2e-10  Score=63.27  Aligned_cols=63  Identities=27%  Similarity=0.419  Sum_probs=45.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHH---HHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNE---VTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~---~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..||+|.+....   .........+   +.++..++|||||++
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l  257 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM  257 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEE
Confidence            67999999999999999999998777777999985321   1112223333   455667789999874

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=98.99  E-value=1.9e-09  Score=58.02  Aligned_cols=66  Identities=18%  Similarity=0.326  Sum_probs=45.2

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ...+.|.....||.|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..+. |+||+++
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l   74 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNL   74 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCee
Confidence            4567899999999999999999998766666699988432  3334566888999999997 9999863

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=98.99  E-value=9.6e-10  Score=57.41  Aligned_cols=66  Identities=24%  Similarity=0.332  Sum_probs=51.1

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|...+.||+|+||.||.+...     .....+++|.+... .....+.+.+|+.++..+.|+||+++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   91 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKL   91 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeE
Confidence            34567888899999999999999863     23355699988543 33345678899999999999999863

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=98.98  E-value=7.8e-10  Score=57.93  Aligned_cols=65  Identities=15%  Similarity=0.040  Sum_probs=51.4

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+........+++|.+....   ......+.+|+..+..+.|+||+++
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   77 (311)
T 3ork_A           10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV   77 (311)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCE
T ss_pred             ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceE
Confidence            4467899999999999999999987666666999985432   2223568889998999999999863

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=98.98  E-value=2e-09  Score=56.65  Aligned_cols=65  Identities=20%  Similarity=0.189  Sum_probs=51.0

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc------ccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR------QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+.....+..+++|.+.....      ...+.+.+|+.++..+.|+|++++
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   80 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITL   80 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceE
Confidence            34568889999999999999999876555569998743211      135678899999999999999863

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=98.98  E-value=1.8e-09  Score=56.74  Aligned_cols=65  Identities=17%  Similarity=0.232  Sum_probs=49.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--------ccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--------QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+........+++|.+.....        .....+..|+.++..+.|+||+++
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   80 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI   80 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCE
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceE
Confidence            44678899999999999999999876666669998853211        122457889999999999999863

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=98.98  E-value=8.8e-10  Score=61.03  Aligned_cols=63  Identities=19%  Similarity=0.274  Sum_probs=46.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+........+|+|.+...  .......+.+|+.++..+.|+||+++
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~  101 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL  101 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeE
Confidence            4588889999999999999998765656699988543  22335678899999999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=98.98  E-value=1.8e-09  Score=59.55  Aligned_cols=64  Identities=25%  Similarity=0.293  Sum_probs=51.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+...   .......+.+|+.++..++|+||+++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~   91 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL   91 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcE
Confidence            34578889999999999999998765556699988432   23346778999999999999999863

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=98.97  E-value=2e-09  Score=56.80  Aligned_cols=64  Identities=17%  Similarity=0.268  Sum_probs=49.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|.....||+|+||.||.+.....+..+++|.+...  .....+.+.+|+.++..+.|+|++++
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   89 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL   89 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeE
Confidence            35678889999999999999998765566699987433  22234557889999999999999863

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=98.97  E-value=2.2e-09  Score=55.79  Aligned_cols=63  Identities=24%  Similarity=0.362  Sum_probs=47.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..+++|.+....  ......+.+|+.++..+.|+|++++
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   67 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL   67 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeE
Confidence            56888899999999999999987555566999885432  2234668899999999999999863

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=98.97  E-value=1.5e-09  Score=57.67  Aligned_cols=66  Identities=21%  Similarity=0.334  Sum_probs=45.3

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc-----cHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ-----GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|...+.||+|+||.||.+.....+..+++|.+......     ....+.+|+.++..+.|+||+++
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   77 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL   77 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCE
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeE
Confidence            3456789999999999999999998755555599988532111     12467889999999999999863

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=98.97  E-value=2.6e-09  Score=55.15  Aligned_cols=63  Identities=21%  Similarity=0.237  Sum_probs=49.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc------cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS------RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||.|.||.||.+.....+..+++|.+....      ....+.+.+|+.++..+.|+|++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   73 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITL   73 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeeh
Confidence            45788899999999999999987555555999874321      1135678999999999999999863

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=98.96  E-value=2.4e-09  Score=55.49  Aligned_cols=61  Identities=15%  Similarity=0.171  Sum_probs=48.6

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |.....||+|+||.||.+........+++|.+...  .....+.+.+|+.++..+.|+|++++
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   90 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF   90 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeee
Confidence            56678899999999999998766666688887432  33345678899999999999999863

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=98.96  E-value=4.1e-09  Score=55.21  Aligned_cols=64  Identities=14%  Similarity=0.078  Sum_probs=50.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc---ccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR---QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+........+++|.+.....   ...+.+.+|+..+..+.|+|++++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~   99 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPI   99 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            3678999999999999999999876666669998854322   223668899999999999999863

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=98.96  E-value=7.9e-10  Score=58.85  Aligned_cols=71  Identities=15%  Similarity=0.185  Sum_probs=53.5

Q ss_pred             ehhhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-----CCccccC
Q 043701            7 DFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-----YRLLLHM   78 (78)
Q Consensus         7 ~~~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-----h~niv~l   78 (78)
                      ++.......+.|...+.||+|+||.||.+........+|+|.+... ......+..|+.++..+.     |+||+++
T Consensus        26 ~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~  101 (360)
T 3llt_A           26 SWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY  101 (360)
T ss_dssp             CCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred             eeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence            3444445567899999999999999999998766666699988542 233456777888888886     8999863

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=98.96  E-value=2.7e-09  Score=55.77  Aligned_cols=64  Identities=19%  Similarity=0.243  Sum_probs=48.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+++|.+...   .......+.+|+..+..+.|+|++++
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   97 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKY   97 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            35688899999999999999988655555599988542   23345678899999999999999863

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.96  E-value=4.2e-10  Score=61.35  Aligned_cols=66  Identities=18%  Similarity=0.315  Sum_probs=51.6

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|...+.||+|+||.||.+.....+..+|+|.+...   .......+..|..++..+.|+||+++
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l  126 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL  126 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeE
Confidence            3457899999999999999999998766666699988532   12223457889999999999999863

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=98.96  E-value=3.8e-09  Score=55.50  Aligned_cols=63  Identities=19%  Similarity=0.250  Sum_probs=48.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+... +.. +++|.+...  .....+.+.+|+.++..++|+||+++
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~~-~~~-vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   99 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEWH-GSD-VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF   99 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEET-TEE-EEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ChhHceeeeEeecCCCeEEEEEEEC-CCc-EEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3466788899999999999999763 344 499988543  23334678899999999999999863

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.96  E-value=1.7e-09  Score=56.36  Aligned_cols=64  Identities=23%  Similarity=0.352  Sum_probs=50.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc----cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS----RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+........+++|.+....    ......+.+|+.++..++|+|++++
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   71 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL   71 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEE
Confidence            467889999999999999999987655556999885321    2235678899999999999999863

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=98.95  E-value=7.3e-09  Score=54.00  Aligned_cols=64  Identities=20%  Similarity=0.426  Sum_probs=51.0

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+.|...+.||+|+||.||.+........+++|.+... .....+.+.+|+.++..+.|+|+++
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   84 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTK   84 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            345688889999999999999988765555699988543 2334577889999999999999986

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=98.95  E-value=3.5e-09  Score=56.48  Aligned_cols=63  Identities=19%  Similarity=0.306  Sum_probs=49.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+........+|+|.+...   .......+..|..++..+ +|+||+++
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l   75 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL   75 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeE
Confidence            5688889999999999999998876667799998543   222345577888888887 89999864

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=98.95  E-value=3e-09  Score=58.40  Aligned_cols=60  Identities=15%  Similarity=0.209  Sum_probs=48.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+... +. .+|+|.+....  ..+.+.+|+.++..++|+||+++
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~-~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~  251 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR-GN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQL  251 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET-TE-EEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec-CC-eEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEE
Confidence            456788899999999999999875 33 45999986432  45679999999999999999863

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.95  E-value=1.8e-09  Score=57.55  Aligned_cols=63  Identities=21%  Similarity=0.252  Sum_probs=51.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||.|+||.||.+........+++|.+... .....+.+.+|+.++..+.|+||+++
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   96 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF   96 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCE
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEE
Confidence            5688899999999999999998765666699988543 33345678899999999999999863

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=98.95  E-value=4.9e-09  Score=54.40  Aligned_cols=61  Identities=26%  Similarity=0.220  Sum_probs=46.3

Q ss_pred             cccceeeeecCCccEEEEEEcCC---cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.||+|+||.||.+.....   ...+++|.+... .....+.+.+|+.++..+.|+|++++
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   87 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL   87 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            44568899999999999986432   234588887543 33345678899999999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=98.95  E-value=4.7e-09  Score=55.24  Aligned_cols=60  Identities=22%  Similarity=0.331  Sum_probs=49.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+........+++|.+...   ..+.+.+|+.++..+. |+|++++
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~   96 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITL   96 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEe
Confidence            5688899999999999999988765556699988543   3566889999999996 9999863

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=98.95  E-value=1.3e-09  Score=57.53  Aligned_cols=64  Identities=22%  Similarity=0.342  Sum_probs=50.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||.|+||.||.+.....+..+|+|.+...   .....+.+..|..++..+.|+||+++
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~   71 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM   71 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceE
Confidence            35688889999999999999998766666699988532   12335667788999999999999863

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=98.94  E-value=3.4e-09  Score=54.75  Aligned_cols=64  Identities=19%  Similarity=0.330  Sum_probs=47.8

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|...+.||.|+||.||.+....+..+ ++|.+..... ..+.+.+|+.++..+.|+|++++
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~v-avK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~   84 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL   84 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEETTTEEE-EEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEcCCCeE-EEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeE
Confidence            3446788889999999999999988755555 9998865432 34678999999999999999863

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=98.94  E-value=1.4e-09  Score=56.36  Aligned_cols=62  Identities=21%  Similarity=0.361  Sum_probs=49.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|...+.||+|+||.||.+.....+..+++|.+.. .....+.+.+|+.++..+.|+|+++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~   66 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVR   66 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHH
Confidence            4568888999999999999999875555569998843 2233567889999999999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=98.94  E-value=2.2e-09  Score=55.77  Aligned_cols=65  Identities=14%  Similarity=0.190  Sum_probs=51.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+........+++|.+...   .....+.+..|+.++..+.|+|++++
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   80 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF   80 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeee
Confidence            446688899999999999999998766666699987432   22345668889999999999999863

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=98.94  E-value=1.9e-09  Score=56.86  Aligned_cols=63  Identities=24%  Similarity=0.367  Sum_probs=45.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcE----EEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVE----IKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||++.......    .+++|.+... .....+.+.+|+.++..++|+||+++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   82 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL   82 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEE
Confidence            568888999999999999998753322    2377777432 33445779999999999999999863

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=98.94  E-value=4.5e-09  Score=56.45  Aligned_cols=63  Identities=21%  Similarity=0.341  Sum_probs=48.7

Q ss_pred             cCcccceeeeecCCccEEEEEEc-------CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW-------HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+...       .....+|+|.+... .....+.+.+|+.++..+ .|+||+++
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~  152 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL  152 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCE
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            56778899999999999999763       23344599998543 333456789999999999 89999863

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=98.94  E-value=1.5e-09  Score=56.33  Aligned_cols=65  Identities=23%  Similarity=0.275  Sum_probs=47.6

Q ss_pred             hhcCcccce-eeeecCCccEEEEEEc--CCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYN-KLGEGRFGPVYKVILW--HSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~-~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|.... .||+|+||.||.+...  .....+++|.+....  ....+.+..|+.++..+.|+|++++
T Consensus        14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   83 (291)
T 1xbb_A           14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM   83 (291)
T ss_dssp             CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            345677767 9999999999999653  344556999885432  2235678899999999999999863

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=98.94  E-value=1e-09  Score=57.56  Aligned_cols=70  Identities=20%  Similarity=0.285  Sum_probs=52.9

Q ss_pred             hhHHHhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701            9 ARIAKATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus         9 ~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +++....++|...+.||+|+||.||.+....     ....+++|.+... .......+.+|+.++..+.|+|++++
T Consensus        18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   93 (322)
T 1p4o_A           18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL   93 (322)
T ss_dssp             CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            3445566788999999999999999987642     2344599988543 23344568899999999999999863

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=98.93  E-value=1.6e-09  Score=57.85  Aligned_cols=63  Identities=29%  Similarity=0.392  Sum_probs=50.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..+|+|.+...   .....+.+.+|+.++..+.|+||+++
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~  106 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL  106 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            5688899999999999999998765566699988432   22345678889999999999999863

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=98.93  E-value=1.8e-09  Score=59.85  Aligned_cols=64  Identities=16%  Similarity=0.163  Sum_probs=50.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+|+|.+....   ......+.+|+.++..+.|+||+++
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l   81 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL   81 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            367888999999999999999987555556999885321   1234568899999999999999863

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=98.93  E-value=2.4e-09  Score=56.65  Aligned_cols=64  Identities=14%  Similarity=0.187  Sum_probs=51.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+........+++|.+...   .....+.+..|+.++..+.|+||+++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  106 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF  106 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            45678889999999999999998776666699987432   22345678899999999999999863

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=98.93  E-value=1.6e-09  Score=55.87  Aligned_cols=65  Identities=28%  Similarity=0.297  Sum_probs=50.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||.|++|.||.+........+++|.+...   .......+.+|+.++..+.|+|++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   74 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL   74 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcch
Confidence            446788899999999999999998776666699987432   11224568889999999999999863

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=98.92  E-value=3.9e-09  Score=55.24  Aligned_cols=63  Identities=22%  Similarity=0.266  Sum_probs=48.4

Q ss_pred             cCccc-ceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSS-YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~-~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +.|.. .+.||+|+||.||.+........+|+|.+..........+.+|+..+..+ .|+||+++
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~   76 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL   76 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeE
Confidence            34555 37799999999999987655556699998654444567788999998885 79999863

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=98.92  E-value=3.9e-09  Score=55.21  Aligned_cols=65  Identities=22%  Similarity=0.222  Sum_probs=47.7

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+....   ....+++|.+...  .....+.+.+|+..+..++|+|++++
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~  101 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL  101 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeee
Confidence            34667888999999999999997653   3345599988543  23345678899999999999999874

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=98.92  E-value=3.7e-09  Score=55.23  Aligned_cols=70  Identities=19%  Similarity=0.304  Sum_probs=52.6

Q ss_pred             hhHHHhhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701            9 ARIAKATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus         9 ~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..+....++|...+.||+|+||.||.+...     .....+++|.+... .......+.+|+.++..+ +|+|++++
T Consensus        20 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            344455678999999999999999999752     23455699988543 233446788999999999 78999863

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=98.92  E-value=3.5e-09  Score=55.29  Aligned_cols=67  Identities=21%  Similarity=0.224  Sum_probs=51.5

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEE-----cCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVIL-----WHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~-----~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ....++|...+.||+|+||.||.+..     ......+++|.+... .....+.+.+|+.++..+ .|+|++++
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~   92 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL   92 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeE
Confidence            34456788899999999999999975     234455699988643 223456789999999999 89999863

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=98.91  E-value=7.5e-09  Score=52.97  Aligned_cols=62  Identities=16%  Similarity=0.335  Sum_probs=49.7

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+....+..+ ++|.+..... ..+.+.+|+..+..+.|+|++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~v-aiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~   68 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL   68 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEE-EEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeE-EEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeE
Confidence            35678889999999999999988655554 9998865432 34678999999999999999863

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=98.91  E-value=3.8e-09  Score=54.30  Aligned_cols=64  Identities=20%  Similarity=0.283  Sum_probs=50.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|++|.||.+........+++|.+... .....+.+.+|+.++..+.|+|++++
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   70 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF   70 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceee
Confidence            35688889999999999999998755555599987533 22335678899999999999999863

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=98.91  E-value=9.2e-09  Score=53.41  Aligned_cols=66  Identities=17%  Similarity=0.154  Sum_probs=50.4

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---------cccHHHHHHHHHHHHHcC-CCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---------RQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ...++|.....||.|.+|.||.+.....+..+++|.+....         ....+.+.+|+.++..+. |+|++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~   89 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL   89 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            34577899999999999999999987666666999885432         112345788999999995 9999863

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=98.91  E-value=3.4e-09  Score=57.59  Aligned_cols=63  Identities=17%  Similarity=0.303  Sum_probs=48.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+........+|+|.+...   .......+..|..++..+ .|+||+++
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l  118 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL  118 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCee
Confidence            5688899999999999999998877777799988532   222234577888888776 89999864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=98.91  E-value=8.2e-09  Score=53.33  Aligned_cols=66  Identities=17%  Similarity=0.168  Sum_probs=50.3

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...+.|...+.||+|+||.||.+....   ....+++|..... .....+.+.+|+..+..+.|+|++++
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   81 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL   81 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceE
Confidence            345678889999999999999998753   2344588887543 23345678899999999999999863

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=98.91  E-value=6.9e-09  Score=53.58  Aligned_cols=65  Identities=22%  Similarity=0.280  Sum_probs=50.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+....   ....+++|.+... .....+.+.+|+.++..+.|+|++++
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   78 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL   78 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceE
Confidence            45678889999999999999998643   2334589988543 33345678999999999999999863

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=98.91  E-value=4.6e-09  Score=56.08  Aligned_cols=66  Identities=23%  Similarity=0.329  Sum_probs=50.1

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ...++|...+.||+|+||.||.+.....+..+|+|.+...   .......+..|..++..+ .|+||+++
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l   83 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM   83 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcE
Confidence            4457899999999999999999998876677799988532   122345577788888776 89999863

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.91  E-value=1.4e-09  Score=59.30  Aligned_cols=58  Identities=19%  Similarity=0.374  Sum_probs=45.3

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|...+.||+|+||.||.+.....+..+|+|.+....    ....+|+.++..++|+||+++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l  112 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRL  112 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccce
Confidence            4777899999999999999987655566999874321    123368899999999999863

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=98.90  E-value=4.1e-09  Score=55.69  Aligned_cols=64  Identities=20%  Similarity=0.324  Sum_probs=44.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCCc----cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKGS----RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+...   ..+..+|+|.+....    ......+..|+.++..+.|+||+++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   86 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDL   86 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccce
Confidence            367889999999999999999873   344455999885431    2234557789999999999999863

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.90  E-value=5.5e-09  Score=54.13  Aligned_cols=65  Identities=20%  Similarity=0.275  Sum_probs=51.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|.....||.|++|.||.+........+++|.+...  .....+.+.+|+.++..+.|+|++++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   86 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL   86 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEE
Confidence            446788999999999999999998755555599987432  23345678899999999999999863

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.90  E-value=3.6e-09  Score=56.25  Aligned_cols=67  Identities=15%  Similarity=0.099  Sum_probs=40.9

Q ss_pred             HHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           11 IAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        11 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .....++|...+.||+|+||.||.+.....+..+|+|.+.... ........++..+..+.|+||+++
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~   84 (360)
T 3e3p_A           18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQL   84 (360)
T ss_dssp             HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCE
T ss_pred             chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccH
Confidence            3456688999999999999999999987655556999874322 223456677777888999999863

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=98.90  E-value=6.3e-09  Score=54.12  Aligned_cols=63  Identities=22%  Similarity=0.261  Sum_probs=47.6

Q ss_pred             cCcccceeeeecCCccEEEEEE----cCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVIL----WHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~----~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|...+.||+|+||.||.+.+    ......+++|.+... .....+.+.+|+.++..+.|+|++++
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   88 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY   88 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeee
Confidence            4477889999999999999984    334455699988543 23345678899999999999999863

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.89  E-value=5.8e-09  Score=54.97  Aligned_cols=65  Identities=26%  Similarity=0.253  Sum_probs=47.0

Q ss_pred             hhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||.|+||.||.+...     .....+++|.+... .......+..|+.++..+.|+||+++
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   98 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC   98 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeE
Confidence            4467899999999999999999742     23334599998543 33345678899999999999999863

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=98.89  E-value=9.1e-09  Score=53.92  Aligned_cols=59  Identities=15%  Similarity=0.233  Sum_probs=47.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+... +.. +++|.+...  ...+.+..|+..+..+.|+||+++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~-vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~   66 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR-AKD-VAIKQIESE--SERKAFIVELRQLSRVNHPNIVKL   66 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TEE-EEEEECSST--THHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hHeeeeeEeecCCCceEEEEEEC-Cee-EEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeE
Confidence            45778899999999999999874 334 499988532  235678999999999999999863

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=98.89  E-value=4.1e-09  Score=56.43  Aligned_cols=64  Identities=27%  Similarity=0.373  Sum_probs=49.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+|+|.+...   .......+..|..++..+ .|+||+++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l   89 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL   89 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeE
Confidence            46799999999999999999998766666699988532   222345577888888887 69999864

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.89  E-value=4.2e-10  Score=60.38  Aligned_cols=63  Identities=13%  Similarity=-0.006  Sum_probs=45.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccC---CccccHHHHHHHH---HHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSK---GSRQGMEELKNEV---TLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~---~~~~~~~~~~~~~---~~~~~l~h~niv~   77 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+..   ......+.+.+|+   ..+..+.|+||++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~  140 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK  140 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHH
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHH
Confidence            3557778999999999999999765455559999852   2333456788998   4455667999975

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=98.89  E-value=3.3e-09  Score=60.07  Aligned_cols=64  Identities=27%  Similarity=0.443  Sum_probs=50.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+|+|.+...   .......+..|+.++..++|+||+++
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l  249 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL  249 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeE
Confidence            35688899999999999999998766666699988432   12234567889999999999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=98.89  E-value=7.4e-09  Score=53.31  Aligned_cols=65  Identities=25%  Similarity=0.296  Sum_probs=50.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+........+++|.+...  .......+.+++..+..+ .|+||+++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~   76 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY   76 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeee
Confidence            345688899999999999999998755555699988542  233456688888888888 89999863

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=98.89  E-value=4.5e-09  Score=55.63  Aligned_cols=67  Identities=19%  Similarity=0.247  Sum_probs=49.4

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +...++|...+.||+|+||.||.+...     .....+++|.+... .......+.+|+.++..+ .|+||+++
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  114 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNL  114 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeE
Confidence            344567888999999999999999862     23445599988543 233456789999999999 89999863

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=98.89  E-value=4.7e-09  Score=54.28  Aligned_cols=63  Identities=25%  Similarity=0.295  Sum_probs=50.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|...+.||+|+||.||.+........+++|.+...   .......+.+|+.++..+.|+|+++
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~   78 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR   78 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCC
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEee
Confidence            36788899999999999999998766666699987432   1122456889999999999999986

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=98.88  E-value=2.5e-09  Score=55.13  Aligned_cols=64  Identities=23%  Similarity=0.332  Sum_probs=49.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+++|.+....   ....+.+.+|+.++..+.|+|++++
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   76 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILEL   76 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCE
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeE
Confidence            356888999999999999999986555555999874321   1224678899999999999999863

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=98.88  E-value=4e-09  Score=59.37  Aligned_cols=63  Identities=24%  Similarity=0.442  Sum_probs=50.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..+|+|.+...   .......+..|+.++..++|+||+++
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l  250 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL  250 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            5688889999999999999998765666699988432   12234568889999999999999863

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=98.88  E-value=1.2e-08  Score=53.07  Aligned_cols=63  Identities=19%  Similarity=0.150  Sum_probs=47.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|...+.||+|+||.||.+....   ....+++|.+... .....+.+.+|+.++..+.|+|++++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   91 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL   91 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeee
Confidence            346778999999999999998642   2234588887543 33345678899999999999999874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=98.88  E-value=6.7e-09  Score=54.75  Aligned_cols=67  Identities=19%  Similarity=0.217  Sum_probs=50.8

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCc-----EEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSV-----EIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~-----~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ....++|...+.||.|+||.||.+......     ..+++|.+... .....+.+.+|+.++..+ .|+||+++
T Consensus        42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  115 (333)
T 2i1m_A           42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL  115 (333)
T ss_dssp             BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeE
Confidence            344567888999999999999999875322     24489988543 233456788999999999 89999863

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=98.87  E-value=5.5e-09  Score=53.72  Aligned_cols=64  Identities=19%  Similarity=0.184  Sum_probs=49.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|.+|.||.+.....+..+++|.+...   .....+.+.+|+..+..+.|+|++++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   76 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL   76 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEE
Confidence            36788899999999999999998754555599987432   12234578899999999999999863

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.87  E-value=2.4e-09  Score=54.79  Aligned_cols=61  Identities=20%  Similarity=0.207  Sum_probs=48.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+... +..+ ++|.+...  .....+.+.+|+.++..++|+||+++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~-avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   72 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRWQ-GNDI-VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPV   72 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEET-TEEE-EEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECE
T ss_pred             HHhHHHHHhcCCCcceEEEEEEC-CeeE-EEEEecccccCHHHHHHHHHHHHHHHhcCCCchhhe
Confidence            56888899999999999999875 4444 89988543  23345678899999999999999863

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=98.87  E-value=7e-09  Score=53.44  Aligned_cols=60  Identities=22%  Similarity=0.301  Sum_probs=48.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...+|...+.||+|+||.||.+.....+..+++|.+....    ..+.+|+.++..+.|+|+++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~   68 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVH   68 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCC
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEE
Confidence            4456888999999999999999987545555999885432    34678999999999999986

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=98.86  E-value=3.6e-09  Score=55.73  Aligned_cols=60  Identities=22%  Similarity=0.177  Sum_probs=45.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+... + ..+|+|.+.... ........|+.++..++|+||+++
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~-~-~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~   83 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL-N-EYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQF   83 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET-T-EEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCE
T ss_pred             hhchhhheecccCceEEEEEEEC-C-CEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhh
Confidence            56888999999999999999875 3 445999885432 223445667888889999999863

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=98.86  E-value=7.3e-09  Score=54.76  Aligned_cols=63  Identities=24%  Similarity=0.367  Sum_probs=48.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcE----EEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVE----IKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.......    .+++|.+... .....+.+.+|+.++..++|+||+++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~   82 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL   82 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCC
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEE
Confidence            568899999999999999998753322    2367766432 33456778999999999999999874

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=98.86  E-value=1.5e-08  Score=57.67  Aligned_cols=56  Identities=21%  Similarity=0.382  Sum_probs=44.6

Q ss_pred             eeeecCCccEEEEEEc--CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           23 KLGEGRFGPVYKVILW--HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        23 ~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .||+|+||.||.+...  .....+|+|.+... .....+.+.+|+.++..++|+||+++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l  401 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL  401 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            7999999999999775  23445699998653 23356789999999999999999874

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=98.86  E-value=1.4e-08  Score=52.06  Aligned_cols=62  Identities=21%  Similarity=0.334  Sum_probs=46.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc----cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS----RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+... +.. +++|.+....    ....+.+.+|+.++..++|+|++++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~-vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   71 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI-GDE-VAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL   71 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET-TEE-EEEEEC----------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc-CCe-EEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            357888899999999999999874 344 4899875321    2234678899999999999999863

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=98.86  E-value=6.5e-10  Score=58.61  Aligned_cols=63  Identities=19%  Similarity=0.250  Sum_probs=46.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc-ccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+........+|+|.+..... .....+.+|+.++..+.|+|++++
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   65 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL   65 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCee
Confidence            467888999999999999999876555669998854321 112235578889999999999863

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=98.86  E-value=5.8e-09  Score=55.05  Aligned_cols=61  Identities=20%  Similarity=0.087  Sum_probs=48.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .++|...+.||.|+||.||.+.....+..+|+|.+....  ..+.+..|+.++..+ .|+|+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~   69 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQ   69 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCC
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCE
Confidence            467899999999999999999987666666999875332  234588899999999 8999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=98.86  E-value=7.2e-09  Score=54.20  Aligned_cols=63  Identities=25%  Similarity=0.483  Sum_probs=45.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||.|+||.||.+.....+..+++|.+....  ..+.+.+|+.++..+.|+|++++
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~   89 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKY   89 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccE
Confidence            4466888999999999999999987655566999885432  34668899999999999999863

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=98.85  E-value=7.7e-09  Score=54.05  Aligned_cols=65  Identities=22%  Similarity=0.228  Sum_probs=45.0

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-----cccHHHHHHHHHHHHHc---CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-----RQGMEELKNEVTLIFVS---NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~~~~~l---~h~niv~l   78 (78)
                      ..+.|.....||+|+||.||.+........+|+|.+....     ......+.+|+..+..+   .|+|++++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~   79 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL   79 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEe
Confidence            4568999999999999999999986655666999874211     11224566677666655   59999863

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=98.85  E-value=6.7e-09  Score=59.52  Aligned_cols=64  Identities=9%  Similarity=0.108  Sum_probs=50.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcC-CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWH-SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|.....||+|+||.||.+.+.. .+..+++|.+... .......+..|+.++..+.|+||+++
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~  144 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQI  144 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeE
Confidence            3678889999999999999999864 3455599987533 23344568899999999999999863

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=98.85  E-value=1.4e-08  Score=53.71  Aligned_cols=65  Identities=20%  Similarity=0.329  Sum_probs=49.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC-------CcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH-------SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+....       ....+++|.+... .......+..|+.++..+ .|+||+++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  106 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL  106 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence            34678889999999999999998641       2334599988543 333456788999999999 89999863

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=98.84  E-value=6.3e-09  Score=55.10  Aligned_cols=62  Identities=16%  Similarity=0.305  Sum_probs=48.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc---c--------------HHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ---G--------------MEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~--------------~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .++|...+.||+|+||.||.+.. .+ ..+++|.+......   .              .+.+.+|+.++..++|+|+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~  107 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DN-KFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT  107 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TT-EEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CC-ceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence            36788999999999999999988 44 44599987432111   1              177899999999999999986


Q ss_pred             C
Q 043701           78 M   78 (78)
Q Consensus        78 l   78 (78)
                      +
T Consensus       108 ~  108 (348)
T 2pml_X          108 C  108 (348)
T ss_dssp             C
T ss_pred             E
Confidence            4

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=98.84  E-value=1.2e-09  Score=58.00  Aligned_cols=64  Identities=17%  Similarity=0.281  Sum_probs=50.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--------ccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--------QGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|.....||+|+||.||.+........+++|.+.....        .....+..|+.++..+.|+||+++
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~   94 (335)
T 3dls_A           23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKV   94 (335)
T ss_dssp             HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCE
T ss_pred             ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3568889999999999999999876666669998854321        123457789999999999999863

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=98.84  E-value=1.7e-08  Score=54.40  Aligned_cols=64  Identities=22%  Similarity=0.330  Sum_probs=48.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcC-------CcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWH-------SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~-------~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+....       ....+|+|.+... .......+.+|+.++..+ .|+||+++
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~  140 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL  140 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhh
Confidence            3567888999999999999998632       2244599988543 333456788999999999 89999863

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.83  E-value=1.4e-08  Score=53.74  Aligned_cols=62  Identities=21%  Similarity=0.310  Sum_probs=46.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCC----cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHS----VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~----~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|...+.||+|+||.||.+.....    ...+++|.+... .......+.+|+.++..+.|+||+++
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  111 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL  111 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            455678999999999999986532    233589988543 23345578899999999999999863

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=98.82  E-value=1.3e-08  Score=53.39  Aligned_cols=63  Identities=21%  Similarity=0.236  Sum_probs=44.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ++|...+.||+|+||.||++.....+..+|+|.+...  ..........++..+..+ .|+|++++
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l  122 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRL  122 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            4578888999999999999998755556699987432  222333455555555555 89999863

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=98.81  E-value=2.2e-08  Score=52.74  Aligned_cols=65  Identities=18%  Similarity=0.396  Sum_probs=46.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHH-HHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVT-LIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~-~~~~l~h~niv~l   78 (78)
                      ..++|.....||+|+||.||.+.....+..+++|.+... .......+..++. .+..+.|+||+++
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~   86 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF   86 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeee
Confidence            346788889999999999999998765666699988543 2223344555555 5667799999863

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=98.81  E-value=2.6e-08  Score=53.44  Aligned_cols=66  Identities=11%  Similarity=0.127  Sum_probs=48.9

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc----c----cHHHHHHHHHHHHHc-CCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR----Q----GMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~----~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ...+.|.....||.|++|.||.+.....+..+++|.+.....    .    ..+.+..|+.++..+ .|+||+++
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  165 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL  165 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            344568888999999999999999875445559998754321    1    134577888999998 79999863

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=98.80  E-value=2.5e-08  Score=57.01  Aligned_cols=57  Identities=26%  Similarity=0.327  Sum_probs=44.2

Q ss_pred             eeeeecCCccEEEEEEc--CCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILW--HSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.||+|+||.||++.+.  .....+|+|.+...  .....+.+.+|+.++..++|+||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l  435 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM  435 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            47999999999999654  33455699988543  22335779999999999999999874

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=98.80  E-value=1e-09  Score=60.13  Aligned_cols=63  Identities=22%  Similarity=0.261  Sum_probs=41.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..+|+|.+...   .......+..|+.++..+.|+||+++
T Consensus       148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l  213 (446)
T 4ejn_A          148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL  213 (446)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCE
T ss_pred             HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeE
Confidence            5688899999999999999998766666699988532   22234557788888899999999863

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=98.80  E-value=1.6e-08  Score=53.75  Aligned_cols=63  Identities=14%  Similarity=0.255  Sum_probs=48.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCC--CccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNY--RLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h--~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+....+.. +|+|.+...  .....+.+.+|+.++..+.|  +||+++
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~-vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~   74 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL   74 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCE-EEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCE-EEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEE
Confidence            3558889999999999999998765544 499987533  33344678899999999976  888763

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=98.80  E-value=1.9e-08  Score=52.02  Aligned_cols=65  Identities=22%  Similarity=0.236  Sum_probs=45.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccH-HHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGM-EELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~-~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|.....||+|+||.||.+.....+..+|+|.+.... .... ..+..+...+..+.|+|++++
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~   71 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF   71 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            3467888999999999999999987666666999885432 2222 223344445677899999863

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=98.78  E-value=3.9e-08  Score=50.97  Aligned_cols=63  Identities=22%  Similarity=0.374  Sum_probs=47.1

Q ss_pred             cCcccce-eeeecCCccEEEEEEc--CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYN-KLGEGRFGPVYKVILW--HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~-~ig~g~~~~v~~~~~~--~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +++.... .||+|+||.||.+...  .....+++|.+... .....+.+.+|+.++..+.|+|++++
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   75 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL   75 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEE
Confidence            4455555 8999999999999764  23444599988653 33345678899999999999999863

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=98.78  E-value=1.3e-08  Score=54.80  Aligned_cols=61  Identities=20%  Similarity=0.191  Sum_probs=46.2

Q ss_pred             cccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.||+|+||.||.+....   ....+++|.+... .....+.+.+|+.++..+.|+||+++
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~  155 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL  155 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCC
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence            4456889999999999997642   2234588887543 33445778999999999999999874

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=98.77  E-value=1.1e-08  Score=54.76  Aligned_cols=65  Identities=23%  Similarity=0.251  Sum_probs=49.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|.....||+|+||.||.+.....+..+|+|.+...   .......+..|..++..+ .|+|++++
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l   86 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL   86 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeE
Confidence            346799999999999999999998776677799988532   122345677888888877 79999863

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=98.77  E-value=1.4e-08  Score=53.46  Aligned_cols=63  Identities=17%  Similarity=0.332  Sum_probs=45.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEE--EEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEI--KSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~--~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+........  +++|.+... .....+.+..|+.++..+ .|+|++++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   91 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL   91 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhh
Confidence            5678889999999999999987644432  377777432 233456688999999999 89999863

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=98.77  E-value=2.5e-08  Score=51.41  Aligned_cols=60  Identities=15%  Similarity=0.209  Sum_probs=47.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|++|.||.+... +. .+++|.+....  ..+.+.+|+.++..+.|+|++++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~-~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~   79 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR-GN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQL   79 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TE-EEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCE
T ss_pred             hhhceEEeEEecCCCceEEEEEEc-CC-EEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeE
Confidence            467888999999999999999874 33 44999885432  45678899999999999999863

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=98.77  E-value=7.9e-09  Score=54.05  Aligned_cols=67  Identities=15%  Similarity=0.170  Sum_probs=45.6

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc------ccHHHHHHHHHHHHHc----CCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR------QGMEELKNEVTLIFVS----NYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~l----~h~niv~l   78 (78)
                      ....++|...+.||+|+||.||.+.....+..+++|.+.....      .....+..|+..+..+    .|+|++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~  103 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL  103 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence            3445679999999999999999998865555569999854321      1223456788888888    89999863

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.77  E-value=2.3e-08  Score=53.66  Aligned_cols=62  Identities=16%  Similarity=0.250  Sum_probs=48.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC--------CCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN--------YRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~--------h~niv~   77 (78)
                      .+.|...+.||+|+||.||.+........+|+|.+... ....+.+.+|+.++..+.        |+|+++
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            35688899999999999999998766667799998643 233566888998888875        566765

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=98.76  E-value=5.6e-09  Score=55.06  Aligned_cols=63  Identities=19%  Similarity=0.271  Sum_probs=46.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcE----EEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVE----IKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.......    .+++|.+... .......+.+++..+..++|+||+++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   80 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL   80 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeE
Confidence            568888999999999999998754322    1377776432 22233557788889999999999863

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=98.76  E-value=3.5e-08  Score=52.17  Aligned_cols=55  Identities=24%  Similarity=0.251  Sum_probs=43.8

Q ss_pred             ceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           21 YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        21 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      .+.||+|+||.||.+.....+..+|+|.+...   ....+.+|+..+..+. |+||+++
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~   71 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKL   71 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEE
Confidence            37799999999999998766666699988432   3456778999999986 9999863

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=98.76  E-value=7e-08  Score=50.13  Aligned_cols=60  Identities=18%  Similarity=0.231  Sum_probs=44.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHH--cCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFV--SNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+.. .+. .+|+|.+...   ....+..+.+++..  +.|+|++++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~-~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~   67 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW-QGE-NVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGF   67 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE-TTE-EEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE-CCE-EEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeE
Confidence            346788999999999999999987 344 4599987432   34556667776666  789999863

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=98.76  E-value=1.5e-08  Score=53.58  Aligned_cols=55  Identities=24%  Similarity=0.416  Sum_probs=41.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--------cccHHHHHHHHHHHHHcC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--------RQGMEELKNEVTLIFVSN   71 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~~~~~~~~l~   71 (78)
                      .++|...+.||+|+||.||.+.. .+ ..+|+|.+....        ....+.+.+|+.++..+.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~-~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~   81 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DH-TPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELS   81 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TT-EEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHH
T ss_pred             cccchheeeecccCceEEEEEEe-CC-ceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHH
Confidence            35688889999999999999987 33 555999985321        223367889999888875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=98.76  E-value=3.4e-08  Score=53.47  Aligned_cols=61  Identities=16%  Similarity=0.306  Sum_probs=47.5

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcC--CCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSN--YRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~--h~niv~l   78 (78)
                      .|...+.||+|+||.||.+....+. .+|+|.+...  .......+.+|+.++..+.  |+||+++
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~~~~-~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~  121 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL  121 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTTCC-EEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             ceEEEEEEccCCCeEEEEEEcCCCC-EEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEE
Confidence            3888899999999999999876644 4599988533  3334567899999999996  5899863

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=98.76  E-value=9.6e-09  Score=54.75  Aligned_cols=61  Identities=16%  Similarity=0.262  Sum_probs=46.9

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|...+.||.|+||.||.+.....+..+|+|.+.....    ....|++++.++ .|+||+++
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~   81 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITL   81 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeE
Confidence            34668889999999999999999876666679999854322    234677777777 79999863

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.75  E-value=3.6e-08  Score=51.75  Aligned_cols=66  Identities=17%  Similarity=0.250  Sum_probs=47.1

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEc-CCcEEEEEEEccCC--ccccHHHHHHHHHHHHHc---CCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILW-HSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVS---NYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l---~h~niv~l   78 (78)
                      ...+.|.....||+|+||.||.+... ..+..+++|.+...  .......+.+|+.++..+   .|+||+++
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~   79 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL   79 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEee
Confidence            45578999999999999999999984 44555599987432  111223466677666655   89999863

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=98.74  E-value=2.4e-09  Score=55.64  Aligned_cols=67  Identities=16%  Similarity=0.212  Sum_probs=36.6

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ....++|...+.||.|++|.||.+........+++|.+.... ......+.+|+..+..+.|+|++++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   78 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY   78 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeE
Confidence            344578999999999999999999876444555999875432 2234567888888999999999863

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=98.73  E-value=3.3e-08  Score=53.59  Aligned_cols=59  Identities=19%  Similarity=0.198  Sum_probs=39.6

Q ss_pred             ccc-ceeeeecCCccEEEEEEcC--CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSS-YNKLGEGRFGPVYKVILWH--SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~-~~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |.. ...||+|+||.||.+....  ....+|+|.+....  ....+.+|+.++..+.|+||+++
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~   83 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISL   83 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCC
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeE
Confidence            443 4579999999999998652  33445999885432  23468899999999999999874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=98.73  E-value=3.1e-08  Score=51.42  Aligned_cols=62  Identities=26%  Similarity=0.380  Sum_probs=48.9

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...+.|...+.||+|+||.||.+....  .+ ++|.+...  .....+.+.+|+.++..+.|+|+++
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~--~v-avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   84 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHG--DV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL   84 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSS--EE-EEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCC
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcC--ce-EEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEE
Confidence            345678999999999999999997643  34 88887533  3334567899999999999999986

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=98.72  E-value=6.8e-08  Score=55.44  Aligned_cols=63  Identities=17%  Similarity=0.193  Sum_probs=48.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+....   ....+++|.+... .....+.+.+|+.++..++|+||+++
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l  456 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL  456 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            456778899999999999998743   2344588887543 23334678999999999999999863

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=98.72  E-value=2.1e-08  Score=52.75  Aligned_cols=61  Identities=23%  Similarity=0.277  Sum_probs=46.9

Q ss_pred             cccceeeeecCCccEEEEEEc----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           18 FSSYNKLGEGRFGPVYKVILW----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      |...+.||+|+||.||.+.+.    ..+..+++|.+... .....+.+.+|+.++..+.|+|++++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   98 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY   98 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhE
Confidence            478899999999999887653    23455699998643 23345678999999999999999863

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.71  E-value=1e-08  Score=53.73  Aligned_cols=67  Identities=13%  Similarity=0.239  Sum_probs=50.6

Q ss_pred             hHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcC--CCcccc
Q 043701           10 RIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSN--YRLLLH   77 (78)
Q Consensus        10 ~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~--h~niv~   77 (78)
                      .+....+.|.....||+|+||.||.+....+..+ ++|.+...  .....+.+.+|+..+..+.  |+|+++
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~v-avK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~   92 (313)
T 3cek_A           22 SMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIY-AIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR   92 (313)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEECTTCCEE-EEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCC
T ss_pred             eeeeccceEEEEEEecCCCCEEEEEEEcCCCcEE-EEEEeccccccccchHHHHHHHHHHHhccccCCceEE
Confidence            3334456788999999999999999987665444 99988533  3334567889999999986  588875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.71  E-value=3.8e-09  Score=60.73  Aligned_cols=63  Identities=21%  Similarity=0.232  Sum_probs=48.4

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+.|.....||.|+||.||.+.....+..+|+|.+... .....+.+..|+.++..++|+||++
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~   76 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS   76 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            36799999999999999999987655555599987543 3344567899999999999999986

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.70  E-value=6.2e-08  Score=51.96  Aligned_cols=62  Identities=16%  Similarity=0.074  Sum_probs=39.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHc--CCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVS--NYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l--~h~niv~   77 (78)
                      .+|...+.||+|+||.||.+.....+..+|+|.+....   ....+.+.+|+.++..+  .|+|+++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~  128 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR  128 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-------
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhh
Confidence            34778899999999999999987666666999985532   22345567775545544  5999765

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=98.69  E-value=3.7e-08  Score=50.96  Aligned_cols=64  Identities=23%  Similarity=0.327  Sum_probs=42.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcC--C-cEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWH--S-VEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~--~-~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+....  + ...+++|.+...   .....+.+.+|+..+..+.|+|++++
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   86 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL   86 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccE
Confidence            3568889999999999999998642  2 234588887543   22345678899999999999999863

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.69  E-value=4.9e-08  Score=52.87  Aligned_cols=58  Identities=17%  Similarity=0.371  Sum_probs=44.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|...+.||+|+||.||.+....+..+ ++|.+....    ....+|+.++..++|+||+++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~-aikk~~~~~----~~~~~E~~il~~l~h~niv~l   97 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEV-AIKKVLQDK----RFKNRELQIMRIVKHPNVVDL   97 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEE-EEEEEECCT----TSCCHHHHHHHTCCCTTBCCE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeE-EEEEEecCc----chHHHHHHHHHhCCCCCcceE
Confidence            3578889999999999999998766665 777663221    112268899999999999863

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.68  E-value=5e-08  Score=51.04  Aligned_cols=64  Identities=13%  Similarity=0.301  Sum_probs=39.2

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc-ccH-HHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR-QGM-EELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~-~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|.....||+|+||.||.+.....+..+++|.+..... ... +.+..+..++..+.|+||+++
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~   89 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC   89 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeE
Confidence            4567888999999999999999875555559998854322 222 233344456777799999863

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.67  E-value=1.6e-07  Score=51.46  Aligned_cols=61  Identities=16%  Similarity=0.241  Sum_probs=45.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc------CCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS------NYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l------~h~niv~   77 (78)
                      ..|...+.||+|+||.||.+........+|+|.+... ......+..|+.++..+      .|+|+++
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~  163 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIH  163 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCC
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEE
Confidence            4578889999999999999998776666799998543 22345567787777766      4557765

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.67  E-value=6.4e-08  Score=51.11  Aligned_cols=71  Identities=17%  Similarity=0.282  Sum_probs=51.3

Q ss_pred             hhhHHHhhcCcccc-eeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701            8 FARIAKATDNFSSY-NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus         8 ~~~~~~~~~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      |.......+.|... +.||+|+||.||.+.....+..+|+|.+...  .......+.+|+.++..+ +|+|++++
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~   94 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL   94 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEE
Confidence            33444445555555 8899999999999998765556699988542  223356788999999888 56999863

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.66  E-value=1.1e-07  Score=50.83  Aligned_cols=63  Identities=19%  Similarity=0.216  Sum_probs=48.0

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-----------CCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-----------YRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-----------h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+........+|+|.+... ......+..|+.++..+.           |+|++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~   91 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKL   91 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCC
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHH
Confidence            35788999999999999999998766666699998543 223456778888887765           6788753

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=98.65  E-value=1e-08  Score=55.34  Aligned_cols=63  Identities=19%  Similarity=0.263  Sum_probs=41.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHH-HHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTL-IFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~-~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+........+|+|.+....   ......+..|..+ +..+.|+||+++
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l  104 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL  104 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCE
Confidence            56888999999999999999988766667999885432   1223344555554 456789999864

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=98.64  E-value=2.4e-08  Score=53.18  Aligned_cols=57  Identities=16%  Similarity=0.059  Sum_probs=44.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcC--------CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH--------SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~--------~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ++|...+.||+|+||.||.+....        ....+|+|.+...     +.+.+|+.++..+.|+|+++
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~  106 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVN  106 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHH
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhh
Confidence            568888999999999999998764        2444599987532     45788999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=98.62  E-value=2.9e-07  Score=48.63  Aligned_cols=62  Identities=19%  Similarity=0.217  Sum_probs=47.3

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHH--cCCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFV--SNYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--l~h~niv~l   78 (78)
                      ....++|...+.||+|+||.||.+... + ..+++|.+...   ....+..|.+++..  +.|+|++++
T Consensus        38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~-~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~  101 (342)
T 1b6c_B           38 RTIARTIVLQESIGKGRFGEVWRGKWR-G-EEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF  101 (342)
T ss_dssp             HHHHHHCEEEEEEEEETTEEEEEEEET-T-EEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCE
T ss_pred             ccccccEEEEeeecCCCCcEEEEEEEc-C-ccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEE
Confidence            344567899999999999999999874 4 44599988432   34567788888877  789999863

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.59  E-value=4.6e-07  Score=46.95  Aligned_cols=62  Identities=16%  Similarity=0.143  Sum_probs=48.3

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..++|...+.||+|+||.||.+.....+..+++|.+....  ....+..|+.++..+.|++++.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~   68 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIP   68 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCC
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCC
Confidence            4567999999999999999999986656666999874432  2345888999999998887653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=98.58  E-value=2.8e-07  Score=48.05  Aligned_cols=60  Identities=22%  Similarity=0.261  Sum_probs=44.4

Q ss_pred             hhcCcccc-eeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHH-HHcCCCccccC
Q 043701           14 ATDNFSSY-NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI-FVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~-~~l~h~niv~l   78 (78)
                      ..++|... +.||.|+||.||.+........+|+|.+..     ...+.+|+..+ ..+.|+|++++
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~   76 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRI   76 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhH
Confidence            34556665 779999999999999876555669998843     23466777776 55589999863

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=98.58  E-value=2.2e-07  Score=48.18  Aligned_cols=62  Identities=15%  Similarity=0.202  Sum_probs=47.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCcccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      ..++|...+.||+|+||.||.+.....+..+++|.+....  ....+.+|+..+..+ .|+|+++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~   70 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPN   70 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCC
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCe
Confidence            3467899999999999999999986656666999874322  234577888888888 6888765

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=98.57  E-value=8.2e-08  Score=51.04  Aligned_cols=63  Identities=14%  Similarity=0.106  Sum_probs=39.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCCccc-----------cHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKGSRQ-----------GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~~~~-----------~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+....   ....+++|........           ....+..++..+..+.|+|++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~  113 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF  113 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence            568888999999999999999864   4455588887543211           12336677778888999999863

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=98.56  E-value=3.3e-07  Score=49.81  Aligned_cols=58  Identities=22%  Similarity=0.316  Sum_probs=42.5

Q ss_pred             cCcccc-eeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHH-HcCCCccccC
Q 043701           16 DNFSSY-NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIF-VSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~l~h~niv~l   78 (78)
                      ++|... ..||.|.||.||.+.....+..+|+|.+..     ...+.+|+.++. ...|+||+++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l  120 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRI  120 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceE
Confidence            345444 689999999999999876666669998853     234667777764 4589999863

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.54  E-value=5.7e-07  Score=49.34  Aligned_cols=58  Identities=21%  Similarity=0.126  Sum_probs=42.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .+...+.||+|+||.||......+..+ |+|.+...   ..+.+..|+.++..+ .|+||+++
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~v-AvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~   74 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPV-AVKRMLID---FCDIALMEIKLLTESDDHPNVIRY   74 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEE-EEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEE-EEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeE
Confidence            345568899999999976544445544 99987432   234577899988876 89999863

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.54  E-value=6e-07  Score=46.49  Aligned_cols=63  Identities=16%  Similarity=0.155  Sum_probs=44.4

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ...+.|...+.||+|+||.||.+........+++|......  ....+..|+.++..+.|++++.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~   68 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIP   68 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCC
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCC
Confidence            35578999999999999999999986666666999763321  1234778889999998877653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=98.52  E-value=1.1e-07  Score=54.73  Aligned_cols=64  Identities=23%  Similarity=0.257  Sum_probs=48.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .++|.....||+|+||.||.+........+|+|.+...   .....+.+..|..++..+ +|++|+++
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l  407 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL  407 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEE
Confidence            35688889999999999999998876666699988532   222345677788888876 68888753

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=98.52  E-value=7.3e-08  Score=51.50  Aligned_cols=63  Identities=22%  Similarity=0.357  Sum_probs=46.7

Q ss_pred             cCcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCCc----cccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKGS----RQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~~----~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+...   .....+|+|.+....    ......+..|+.++..+ .|+||+++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  124 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL  124 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEE
Confidence            57888999999999999999873   234455999875321    12345567788888888 69999863

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.48  E-value=9.1e-08  Score=50.41  Aligned_cols=65  Identities=20%  Similarity=0.239  Sum_probs=48.7

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc------ccHHHHHHHHHHHHHcC--CCcccc
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR------QGMEELKNEVTLIFVSN--YRLLLH   77 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~l~--h~niv~   77 (78)
                      ...+.|...+.||+|+||.||.+........+++|.+.....      .....+..|+.++..+.  |+|+++
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~  112 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR  112 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceE
Confidence            445678999999999999999999876666669998843211      12244667888888885  599875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.47  E-value=3.5e-07  Score=50.25  Aligned_cols=59  Identities=20%  Similarity=0.244  Sum_probs=42.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..|...+.||.|+||.|+......+..+ |+|.+.....   ..+.+|+.++..+ .|+||+++
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~v-AvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l   83 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDV-AVKRILPECF---SFADREVQLLRESDEHPNVIRY   83 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEE-EEEEECTTTE---EECHHHHHHHHHSCCCTTBCCE
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEE-EEEEECHHHH---HHHHHHHHHHHhccCCCCcCeE
Confidence            3478889999999999665444445555 9998854322   2355788899988 79999864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=98.44  E-value=2.4e-07  Score=49.59  Aligned_cols=64  Identities=16%  Similarity=0.058  Sum_probs=41.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCC-----cEEEEEEEccCCccc-----------cHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHS-----VEIKSVKRLSKGSRQ-----------GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~~~~-----------~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+....+     ...+++|.+......           ....+..++..+..+.|+||+++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            34788899999999999999987643     234589987543211           01123344555667789999863

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=98.44  E-value=1.5e-06  Score=46.13  Aligned_cols=60  Identities=20%  Similarity=0.200  Sum_probs=41.0

Q ss_pred             hhcCcccc-eeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHH-HHHHHcCCCccccC
Q 043701           14 ATDNFSSY-NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEV-TLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~-~~~~~l~h~niv~l   78 (78)
                      ..++|... +.||.|+||.||.+.....+..+|+|.+....    . ...++ ..+..+.|+|++++
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~-~~~e~~~~~~~~~h~~i~~~   87 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----K-ARQEVDHHWQASGGPHIVCI   87 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----H-HHHHHHHHHHHTTSTTBCCE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----H-HHHHHHHHHHhcCCCChHHH
Confidence            34567774 46999999999999987655566999885421    1 22233 34556789999863

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=98.43  E-value=7.1e-07  Score=47.03  Aligned_cols=61  Identities=16%  Similarity=0.196  Sum_probs=43.0

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHH--cCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFV--SNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~--l~h~niv~l   78 (78)
                      ...++|...+.||+|+||.||.+... + ..+|+|.+...   ....+..+.+++..  +.|+||+++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~-~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~   96 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR-G-EKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGF   96 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET-T-EEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCE
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC-C-ceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeE
Confidence            34467899999999999999999875 3 44599987432   23344455555554  489999863

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.42  E-value=1.4e-06  Score=46.03  Aligned_cols=59  Identities=25%  Similarity=0.349  Sum_probs=41.7

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHH--HHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI--FVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~--~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.. .+ ..+|+|.+...   ....+..+.++.  ..+.|+|++++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~-~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~   72 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL-DE-RPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARF   72 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE-TT-EEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCE
T ss_pred             hHHhheeeecccCCCeEEEEEEE-CC-eEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhh
Confidence            46788999999999999999976 33 44599987432   234444454443  35789999863

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.39  E-value=6.9e-07  Score=46.98  Aligned_cols=60  Identities=22%  Similarity=0.223  Sum_probs=45.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEE-cCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVIL-WHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRL   74 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~n   74 (78)
                      ..+.|...+.||+|+||.||.+.. ......+|+|.+.... ...+.+..|+.++..+.|++
T Consensus        12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~   72 (339)
T 1z57_A           12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTD   72 (339)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHC
T ss_pred             ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcC
Confidence            346789999999999999999987 3455566999885432 23466788888888877654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=98.39  E-value=2.6e-07  Score=49.44  Aligned_cols=60  Identities=17%  Similarity=0.121  Sum_probs=42.2

Q ss_pred             hcCcccceeeeecCCccEEEEE-----EcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC---CCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVI-----LWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN---YRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~-----~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~---h~niv~   77 (78)
                      .+.|...+.||+|+||.||.+.     .......+|+|.+...   ....+..++..+..+.   |+|+++
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~  131 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMK  131 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCC
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhh
Confidence            3557778899999999999994     3333344599988543   2456777777777776   788775

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.35  E-value=1.6e-06  Score=46.70  Aligned_cols=60  Identities=22%  Similarity=0.236  Sum_probs=44.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-CCc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-YRL   74 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~n   74 (78)
                      ..++|...+.||+|+||.||.+........+|+|.+.... .....+..|+.++..+. |++
T Consensus        52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~  112 (382)
T 2vx3_A           52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDT  112 (382)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSS
T ss_pred             eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhccc
Confidence            3467888899999999999999987666666999986432 22455667777777774 554

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.34  E-value=2.2e-06  Score=47.84  Aligned_cols=61  Identities=18%  Similarity=0.196  Sum_probs=45.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLL   76 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv   76 (78)
                      ..+.|...+.||.|.||.||.+........+|+|.+.....  ...+..|+.++..+.|.+.+
T Consensus         5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i   65 (483)
T 3sv0_A            5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGI   65 (483)
T ss_dssp             ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTC
T ss_pred             cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCC
Confidence            34678999999999999999999865555669998643321  23477889999999875543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=98.32  E-value=3.7e-08  Score=51.61  Aligned_cols=66  Identities=15%  Similarity=0.257  Sum_probs=48.9

Q ss_pred             hHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           10 RIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        10 ~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+....++|...+.||+|+||.||.+.....  + ++|.+...  .....+.+.+|+.++..+.|+|++++
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~--~-avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~   94 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHGE--V-AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF   94 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESSS--E-EEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCC
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcCe--E-EEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEE
Confidence            3344457788899999999999999987542  4 78877432  22234557788888999999999864

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.29  E-value=1.5e-06  Score=45.95  Aligned_cols=60  Identities=17%  Similarity=0.210  Sum_probs=45.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcC-CcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCc
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWH-SVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRL   74 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~n   74 (78)
                      ..+.|...+.||+|+||.||.+.... +...+|+|.+... ....+.+..|+.++..+.|++
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~   77 (355)
T 2eu9_A           17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKD   77 (355)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHC
T ss_pred             ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcC
Confidence            34678999999999999999998864 3355699988543 233456778888888887655

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.27  E-value=1.8e-06  Score=47.13  Aligned_cols=57  Identities=12%  Similarity=-0.021  Sum_probs=42.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNY   72 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h   72 (78)
                      .+|...+.||+|+||.||++.+...+..+|+|.+...   .....+.+.+|+.++..+.|
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            3467778999999999999998755556699988632   22235678889888888876

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.25  E-value=2e-05  Score=41.22  Aligned_cols=57  Identities=16%  Similarity=0.080  Sum_probs=40.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc------------------ccHHHHHHHHHHHHHcCCC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR------------------QGMEELKNEVTLIFVSNYR   73 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------------------~~~~~~~~~~~~~~~l~h~   73 (78)
                      ..|...+.||.|+||.||.+.. ..+..+|+|.+.....                  .....+.+|+.++..+.|.
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~  164 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL  164 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCC
Confidence            3455669999999999999998 4444559998853211                  1235688999999988743

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.12  E-value=1e-05  Score=41.70  Aligned_cols=58  Identities=9%  Similarity=-0.081  Sum_probs=39.2

Q ss_pred             cccceeeeecCCccEEEEEE-cCCcE-EEEEEEccCCc--cc----------------------cHHHHHHHHHHHHHcC
Q 043701           18 FSSYNKLGEGRFGPVYKVIL-WHSVE-IKSVKRLSKGS--RQ----------------------GMEELKNEVTLIFVSN   71 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~-~~~~~-~~~~k~~~~~~--~~----------------------~~~~~~~~~~~~~~l~   71 (78)
                      +.....||.|+||.||.+.. ..+.. .+|+|.+....  ..                      ....+..|+..+..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            45678999999999999987 44544 05999864321  00                      0124678888888887


Q ss_pred             CCcc
Q 043701           72 YRLL   75 (78)
Q Consensus        72 h~ni   75 (78)
                      |+++
T Consensus       129 ~~~i  132 (258)
T 1zth_A          129 EAGV  132 (258)
T ss_dssp             HTTC
T ss_pred             hCCC
Confidence            7654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.11  E-value=8e-06  Score=46.19  Aligned_cols=56  Identities=9%  Similarity=0.054  Sum_probs=33.1

Q ss_pred             cceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc--c------cHHHHHHHHHHHHHcCCCcccc
Q 043701           20 SYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR--Q------GMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        20 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~------~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+.||+|+||.||++.. .+... ++|.......  .      ..+.+.+|+.++..++|+|+++
T Consensus       340 ~~~~LG~G~fg~Vy~~~~-~~~~~-~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~  403 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSY-LDFDV-IIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPA  403 (540)
T ss_dssp             --------CCEEEEEEEC-SSCEE-EEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCC
T ss_pred             CCCEEeeCCCEEEEEEEE-CCCeE-EEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCc
Confidence            356899999999999954 33444 6666432111  1      1345789999999999999983

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.55  E-value=8.8e-05  Score=40.79  Aligned_cols=32  Identities=16%  Similarity=0.127  Sum_probs=27.5

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEcc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLS   50 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~   50 (78)
                      |.....||.|+++.||.+....+..+ |+|.++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~~G~~v-AvKi~r  128 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADEKGKQK-VLKIHR  128 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECTTCCEE-EEEEEC
T ss_pred             EEecCEeeeCCceEEEEEECCCCCEE-EEEEEe
Confidence            78889999999999999998766665 999864

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=93.61  E-value=0.38  Score=25.08  Aligned_cols=55  Identities=15%  Similarity=0.065  Sum_probs=39.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN   71 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~   71 (78)
                      ..+.....+|.|..+.+|+....++..+ .+|............|..|.+.+..+.
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~-~vK~~~~~~~~~~~~~~~Ea~~L~~L~   69 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVELADGTPL-FVKALPDDAPALDGLFRAEALGLDWLG   69 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEETTSCEE-EEEECCTTCCCCTTHHHHHHHHHHHHT
T ss_pred             CCeEEEEecCCCCCeEEEEEEECCCCEE-EEEEeCCCCcchhhHHHHHHHHHHHHH
Confidence            3456667789999999999988777666 788764433333456788888888774

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=92.48  E-value=0.049  Score=31.43  Aligned_cols=22  Identities=18%  Similarity=0.033  Sum_probs=18.4

Q ss_pred             HHHHHHHHHHHHHc-CCCccccC
Q 043701           57 MEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        57 ~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      .+.|.+|+.++.++ .|+|++++
T Consensus       285 ~~~~~~E~~~l~~~~~~~~i~~~  307 (569)
T 4azs_A          285 KYELHNEIKFLTQPPAGFDAPAV  307 (569)
T ss_dssp             HHHHHHHHHHHHSCCTTCCCCCE
T ss_pred             HHHHHHHHHHHHhcCCCCCeeEE
Confidence            45699999999999 69999864

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=92.47  E-value=0.0063  Score=34.19  Aligned_cols=49  Identities=8%  Similarity=-0.014  Sum_probs=7.0

Q ss_pred             CccEEEEEEcCCcEEEEE------EEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           29 FGPVYKVILWHSVEIKSV------KRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        29 ~~~v~~~~~~~~~~~~~~------k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ||.||++.+......+|+      |.....  .......+.++..++..+.|+|+++
T Consensus       152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~  208 (463)
T 3cxl_A          152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEK  208 (463)
T ss_dssp             BCCC---------CCBGGGC-----------------------------------CB
T ss_pred             chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCC
Confidence            999999877542222355      443321  2223456788888888889999875

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=89.60  E-value=0.82  Score=23.03  Aligned_cols=56  Identities=13%  Similarity=0.018  Sum_probs=32.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcc
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLL   75 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~ni   75 (78)
                      .++......+.|..+.+|......+..+ ++|.....   ....+..|+..+..+.+.++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~-vlK~~~~~---~~~~~~~E~~~l~~l~~~~~   75 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSAQGRPVL-FVKTDLSG---ALNELQDEAARLSWLATTGV   75 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEECTTSCCE-EEEEECSC---TTSCHHHHHHHHHHHHTTTC
T ss_pred             CCCceEecccCCCCceEEEEecCCCCeE-EEEeCCcc---cchhhhHHHHHHHHHHhCCC
Confidence            3444433334556688998865444445 78876432   22446778888777754343

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=84.84  E-value=0.069  Score=30.09  Aligned_cols=22  Identities=14%  Similarity=-0.067  Sum_probs=18.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccC
Q 043701           57 MEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        57 ~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...|..|++.+++++|+|+|++
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L  344 (487)
T 3oja_A          323 SETERLECERENQARQREIDAL  344 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccccchhhH
Confidence            4569999999999999999863

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=84.17  E-value=2.8  Score=21.29  Aligned_cols=57  Identities=11%  Similarity=0.116  Sum_probs=37.3

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN   71 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~   71 (78)
                      ...++|......+.++.+.||..... +... ++|............+..|++.+..+.
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~-vlK~~~~~~~~~~~~~~~E~~~l~~l~   67 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENL-YLKMTDSRYKGTTYDVEREKDMMLWLE   67 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEECS-SCEE-EEEEECGGGTTSTTCHHHHHHHHHHHT
T ss_pred             HHhccceeEeeccCCCCCeEEEEECC-CCcE-EEEeCCcccCCCHHHHHHHHHHHHHHh
Confidence            34456776677778888889987643 3444 888875321122345778888888774

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	78
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-07
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-07
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-06
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-06
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-06
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-06
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-06
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-06
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-06
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-06
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-06
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-06
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	9e-06
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-05
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-05
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-05
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-05
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-05
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	6e-05
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	8e-05
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-04
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-04
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-04
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-04
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	0.001
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.002
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	0.003
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	0.003
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	0.004

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (114), Expect = 7e-09
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNE 63
          WE             +   ++G G FG VYK      V +K +  ++  + Q ++  KNE
Sbjct: 3  WEIPD-------GQITVGQRIGSGSFGTVYKGKWHGDVAVK-MLNVTAPTPQQLQAFKNE 54

Query: 64 VTLI 67
          V ++
Sbjct: 55 VGVL 58

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.9 bits (108), Expect = 4e-08
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNE 63
          WE +         + +  +KLG G++G VY+ +        +VK L + + + +EE   E
Sbjct: 12 WEMER-------TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKE 63

Query: 64 VTLI 67
            ++
Sbjct: 64 AAVM 67

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (105), Expect = 1e-07
 Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 13/75 (17%)

Query: 6  FDFARIAKATDNFSSY---------NKLGEGRFGPVYKVILWHSVE---IKSVKRLSKG- 52
          F F    +A   F+             +G G FG V    L    +     ++K L  G 
Sbjct: 7  FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 53 SRQGMEELKNEVTLI 67
          + +   +  +E +++
Sbjct: 67 TEKQRRDFLSEASIM 81

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (101), Expect = 5e-07
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI 67
           D +    +LG+G FG VYK     +  + + K +   S + +E+   E+ ++
Sbjct: 11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 63

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 7e-07
 Identities = 13/64 (20%), Positives = 23/64 (35%), Gaps = 9/64 (14%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNE 63
          WE          ++     KLG+G FG V+      +  + ++K L        E    E
Sbjct: 12 WEIPR-------ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKP-GTMSPEAFLQE 62

Query: 64 VTLI 67
            ++
Sbjct: 63 AQVM 66

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 1e-06
 Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGM-EELKNEVTLI 67
            D+F   ++LG G  G V+KV    S  + + K +    +  +  ++  E+ ++
Sbjct: 4  KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.0 bits (95), Expect = 2e-06
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 11/72 (15%)

Query: 2  ELWEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKS-----VKRLSKGSRQG 56
          +L   ++ R     +N      +GEG FG V++      +  +      VK L + +   
Sbjct: 4  KLLSLEYPR-----NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD 58

Query: 57 ME-ELKNEVTLI 67
          M+ + + E  L+
Sbjct: 59 MQADFQREAALM 70

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 3e-06
 Identities = 9/53 (16%), Positives = 28/53 (52%)

Query: 15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI 67
             ++ + K+G+G  G VY  +   + +  ++++++   +   E + NE+ ++
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 71

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 3e-06
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%)

Query: 10 RIAKATDNFSSYNKLGEGRFGPVYKVILWHS---VEIK-SVKRLSKG-SRQGMEELKNEV 64
          RI K T+ F     LG G FG VYK +       V+I  ++K L +  S +  +E+ +E 
Sbjct: 4  RILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 62

Query: 65 TLI 67
           ++
Sbjct: 63 YVM 65

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.8 bits (95), Expect = 3e-06
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQG---MEELKNEVTLI 67
             FS   ++G G FG VY      + E+ ++K++S   +Q     +++  EV  +
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFL 69

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 3e-06
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 9/64 (14%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNE 63
          WE          +      +LG G+FG V+        ++ +VK L +GS    +    E
Sbjct: 8  WEVPR-------ETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGS-MSPDAFLAE 58

Query: 64 VTLI 67
            L+
Sbjct: 59 ANLM 62

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.5 bits (94), Expect = 3e-06
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLI 67
          ++FS +  +G G FG VY      + ++ ++K L K     +QG     NE  ++
Sbjct: 4  NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 58

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 40.1 bits (93), Expect = 5e-06
 Identities = 11/52 (21%), Positives = 24/52 (46%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI 67
          D++  + +LG G FG V++V    +    + K +        E ++ E+  +
Sbjct: 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTM 77

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 5e-06
 Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSV--KRLSK-GSRQGMEELKNEVTLI 67
          ++    + +GEG FG V K  +           KR+ +  S+    +   E+ ++
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVL 64

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.8 bits (92), Expect = 7e-06
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 13/70 (18%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKS-----VKRLSKG-SRQGM 57
          WE          +  +   +LG+G FG VY+ +    V+ +      +K +++  S +  
Sbjct: 15 WEVAR-------EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 67

Query: 58 EELKNEVTLI 67
           E  NE +++
Sbjct: 68 IEFLNEASVM 77

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (91), Expect = 7e-06
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLI 67
          +NF    K+GEG +G VYK     + E+ ++K++     +         E++L+
Sbjct: 2  ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 39.3 bits (91), Expect = 9e-06
 Identities = 11/52 (21%), Positives = 25/52 (48%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI 67
          D +    +LG G FG V++ +   +  +   K ++         +KNE++++
Sbjct: 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIM 80

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 1e-05
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLI 67
          +++     +G G +G   K+      +I   K L  GS      + L +EV L+
Sbjct: 4  EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 57

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 1e-05
 Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 5/57 (8%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKS----VKRLSKGSRQGM-EELKNEVTLI 67
             +    +G G FG VYK +L  S   K     +K L  G  +    +   E  ++
Sbjct: 7  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 2e-05
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 13/70 (18%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKS-----VKRLSKGSRQG-M 57
          WEF         +  S    LG G FG V +   +  ++  +     VK L   +     
Sbjct: 18 WEFPR-------NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER 70

Query: 58 EELKNEVTLI 67
          E L +E+ ++
Sbjct: 71 EALMSELKVL 80

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 2e-05
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 16 DNFSSYNKLGEGRFGPVYKVIL------WHSVEIKSVKRLSKGSRQGMEELKNEVTLI 67
           +     KLG+G FG V +           SV +K +K       + M++   EV  +
Sbjct: 8  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAM 65

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 2e-05
 Identities = 8/52 (15%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI 67
             +   ++G G+FG V+     +  ++ ++K + +      E+   E  ++
Sbjct: 5  SELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIRE-GAMSEEDFIEEAEVM 54

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 2e-05
 Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLI 67
           + +   +LG G+FG V         ++ ++K + +GS    +E   E  ++
Sbjct: 4  KDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGS-MSEDEFIEEAKVM 53

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 3e-05
 Identities = 13/46 (28%), Positives = 25/46 (54%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELK 61
           +++    +G G FG VY+  L  S E+ ++K++ +  R    EL+
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQ 65

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 3e-05
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGM-EELKNEVTLI 67
          +++     LGEG +G V   +   + E  +VK +         E +K E+ + 
Sbjct: 5  EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICIN 57

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 4e-05
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 14 ATDNFSSYN-KLGEGRFGPVYKVILWHSVEIKSV--KRLSKGSRQG-MEELKNEVTLI 67
            DN    + +LG G FG V + +     +   V  K L +G+ +   EE+  E  ++
Sbjct: 6  KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIM 63

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 4e-05
 Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 2/48 (4%)

Query: 22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLI 67
           ++G G F  VYK +   +    +   L     ++   +  K E  ++
Sbjct: 15 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML 62

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 5e-05
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLI 67
          ++F     LG+G+FG VY      S  I ++K L K          +L+ EV + 
Sbjct: 6  EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 60

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 6e-05
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 6/55 (10%)

Query: 17 NFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKGSRQG-MEELKNEVTLI 67
          +F+    +G G FG VY   L  +       +VK L++ +  G + +   E  ++
Sbjct: 30 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 6e-05
 Identities = 9/54 (16%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGM-EELKNEVTLI 67
             +++ + +GEG +G V       +    ++K++S    Q   +    E+ ++
Sbjct: 7  GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 60

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (84), Expect = 8e-05
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 13/70 (18%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKS-----VKRLSKGSRQG-M 57
          WEF         +N      LG G FG V     +   +        VK L + +     
Sbjct: 32 WEFPR-------ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER 84

Query: 58 EELKNEVTLI 67
          E L +E+ ++
Sbjct: 85 EALMSELKMM 94

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 8e-05
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 13/70 (18%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKS-----VKRLSKGSRQG-M 57
          WEF         D       LG G FG V +   +   +  +     VK L +G+     
Sbjct: 8  WEFPR-------DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH 60

Query: 58 EELKNEVTLI 67
            L +E+ ++
Sbjct: 61 RALMSELKIL 70

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 1e-04
 Identities = 9/64 (14%), Positives = 20/64 (31%), Gaps = 11/64 (17%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNE 63
          W  +                +G+G FG V      +     +VK +   +    +    E
Sbjct: 2  WALNM-------KELKLLQTIGKGEFGDVMLGD--YRGNKVAVKCIKNDATA--QAFLAE 50

Query: 64 VTLI 67
           +++
Sbjct: 51 ASVM 54

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (83), Expect = 1e-04
 Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 11/68 (16%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKGSRQGM-EE 59
          +E          +       +GEG+FG V++ I     +     ++K     +   + E+
Sbjct: 2  YEIQR-------ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 54

Query: 60 LKNEVTLI 67
             E   +
Sbjct: 55 FLQEALTM 62

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (83), Expect = 1e-04
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLI 67
           +F     LG G FG V+ +   H+    ++K L K      + +E   +E  ++
Sbjct: 4  QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 58

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 1e-04
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 22 NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH 77
          + LGEG+F  VYK    ++ +I ++K++  G R   ++  N   L  +   + L H
Sbjct: 4  DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 59

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 1e-04
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 3/58 (5%)

Query: 13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLI 67
          K  ++F     LGEG F  V       +    ++K L K        +  +  E  ++
Sbjct: 5  KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 62

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 1e-04
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 15/72 (20%)

Query: 4  WEFDFARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKS-------VKRLSKG-SRQ 55
          WE          D       LGEG FG V         + K        VK L    + +
Sbjct: 8  WELPR-------DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK 60

Query: 56 GMEELKNEVTLI 67
           + +L +E+ ++
Sbjct: 61 DLSDLISEMEMM 72

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.8 bits (82), Expect = 2e-04
 Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEE-LKNEVTLI 67
           D +   + LG G F  V       + ++ ++K ++K + +G E  ++NE+ ++
Sbjct: 8  RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 61

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 2e-04
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKN 62
          ++F  +  LG+G FG V+      + +  ++K L K      ++++ 
Sbjct: 2  EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 48

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 2e-04
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLI 67
          ++F     LG+G FG V  V    +    ++K L K    ++  +     E  ++
Sbjct: 5  NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 59

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 3e-04
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 22 NKLGEGRFGPVYKVIL--WHSVEIKSVKRLSKGSRQG--MEELKNEVTLI 67
           +LG G FG V K        V+  +VK L   +      +EL  E  ++
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 62

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 35.2 bits (80), Expect = 3e-04
 Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 2  ELWEFDFARIA-KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEEL 60
          E W+++   +     D++    KLG G++  V++ I   + E   VK L    +   +++
Sbjct: 20 EYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKI 76

Query: 61 KNEVTLI 67
          K E+ ++
Sbjct: 77 KREIKIL 83

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (79), Expect = 4e-04
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLI 67
            +    K+GEG +G V+K     + EI ++KR+               E+ L+
Sbjct: 2  QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLL 55

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 33.9 bits (77), Expect = 7e-04
 Identities = 8/56 (14%), Positives = 15/56 (26%), Gaps = 3/56 (5%)

Query: 15 TDNFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKGSRQGMEELKNEVTLI 67
          +D +     LG G    V+          V +K ++             + E    
Sbjct: 6  SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA 61

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.0 bits (77), Expect = 7e-04
 Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 3/55 (5%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLI 67
          D F     LG G FG V  V    S    ++K L K      + +E   NE  ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 95

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 34.1 bits (77), Expect = 7e-04
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHS--VEIKSVKRLSKGSRQGMEELKNEVTLI 67
          + +    K+GEG +G VYK    +     +K + RL K           E++++
Sbjct: 2  EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISIL 54

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (76), Expect = 8e-04
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLI 67
           + + + + +G G +G V       +    +VK+LS+   S    +    E+ L+
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL 71

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (75), Expect = 0.001
 Identities = 13/41 (31%), Positives = 16/41 (39%)

Query: 23 KLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNE 63
           LG G FG VY  I        ++K + K       EL N 
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNG 51

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (73), Expect = 0.002
 Identities = 9/54 (16%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQG--MEELKNEVTLI 67
            +    K+G+G FG V+K     + +  ++K++   + +         E+ ++
Sbjct: 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 63

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.5 bits (73), Expect = 0.003
 Identities = 9/54 (16%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLI 67
            +     +G G +G V   +   +    ++K+L +   S    +    E+ L+
Sbjct: 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLL 71

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.003
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTL 66
          + +     LG G FG V++ +   S +    K +          +K E+++
Sbjct: 5  EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD-QVLVKKEISI 54

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 31.6 bits (71), Expect = 0.004
 Identities = 8/48 (16%), Positives = 17/48 (35%)

Query: 16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNE 63
          +N+     LG G    V + I   + +  +VK +           + +
Sbjct: 3  ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 50

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	78
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.55
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.54
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.5
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.5
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.49
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.48
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.48
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.47
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.46
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.46
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.45
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.45
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.45
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.44
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.43
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.43
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.43
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.42
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.42
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.4
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.4
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.4
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.4
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.39
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.39
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.39
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.39
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.38
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.38
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.37
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.37
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.36
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.35
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.34
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.34
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.34
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.32
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.32
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.31
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.31
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.31
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.3
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.29
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.29
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.26
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.26
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.25
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.24
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.23
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.22
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.21
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.16
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.14
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.13
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.07
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.04
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.03
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.01
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	98.98
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	98.91
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.91
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.3

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.55  E-value=1.7e-15  Score=77.79  Aligned_cols=69  Identities=20%  Similarity=0.295  Sum_probs=55.5

Q ss_pred             hhHHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701            9 ARIAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus         9 ~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++++...++|...+.||+|+||.||++.+...+..+|+|.+... ....+.|.+|+.++..++||||+++
T Consensus        10 ~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~   78 (287)
T d1opja_          10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQL   78 (287)
T ss_dssp             CTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecC
Confidence            34444556788889999999999999998766666699998543 2346779999999999999999874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=8.7e-15  Score=75.17  Aligned_cols=65  Identities=20%  Similarity=0.367  Sum_probs=54.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.+.|+..+.||+|+||.||++.....+..+|+|.+........+.+.+|+.++..++||||+++
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l   74 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL   74 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCE
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence            34568888999999999999999876666669999866555566789999999999999999974

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.9e-14  Score=73.28  Aligned_cols=66  Identities=21%  Similarity=0.341  Sum_probs=53.1

Q ss_pred             HHHhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           11 IAKATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        11 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++...++|...+.||+|+||.||++....+..+ |+|.+.... ...+.|.+|+.++.+++|+||+++
T Consensus         8 wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~v-AvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~   73 (272)
T d1qpca_           8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRL   73 (272)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEE-EEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             eecCHHHeEEeEEEecCCCcEEEEEEECCCCEE-EEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEE
Confidence            334556788899999999999999998755555 999986433 345679999999999999999974

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.50  E-value=6.6e-14  Score=73.53  Aligned_cols=65  Identities=20%  Similarity=0.265  Sum_probs=54.6

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||.+.....+..+|+|.+........+.+.+|+.++..++|+||+++
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~   88 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL   88 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcE
Confidence            34678999999999999999999876666669999866555556778999999999999999874

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=4.8e-14  Score=72.58  Aligned_cols=63  Identities=14%  Similarity=0.318  Sum_probs=52.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||++.....+..+|+|.+........+.+.+|+.++..++||||+++
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~   82 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNY   82 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeE
Confidence            468999999999999999999876556669999865444456779999999999999999874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=7.3e-14  Score=70.75  Aligned_cols=61  Identities=20%  Similarity=0.359  Sum_probs=50.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||+|..+.+..+ |+|.+..... ..+.|.+|+..+..++|+||+++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~v-AvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~   64 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL   64 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEE-EEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEE-EEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeE
Confidence            5788889999999999999998655445 9999865332 35679999999999999999874

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=4.3e-14  Score=71.96  Aligned_cols=63  Identities=19%  Similarity=0.262  Sum_probs=52.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||++.....+..+|+|.+...  .....+.+.+|+.++..++||||+++
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~   68 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY   68 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeE
Confidence            5788899999999999999998766666699998543  33345678899999999999999874

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=1.5e-13  Score=69.66  Aligned_cols=61  Identities=16%  Similarity=0.344  Sum_probs=50.3

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||++...++..+ |+|.+.... ...+.|.+|+.++..++|+||+++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~v-AvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~   65 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQL   65 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEE-EEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEE-EEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccc
Confidence            4678889999999999999998765554 999986533 335679999999999999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.46  E-value=6.2e-14  Score=72.26  Aligned_cols=62  Identities=18%  Similarity=0.253  Sum_probs=47.3

Q ss_pred             CcccceeeeecCCccEEEEEEcCC---cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|...+.||+|+||.||++.....   ...+++|.+... .....+.|.+|+.++.+++|||||++
T Consensus        27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l   92 (299)
T d1jpaa_          27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHL   92 (299)
T ss_dssp             GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccE
Confidence            345568999999999999987532   234588887543 33445679999999999999999974

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.46  E-value=9.1e-14  Score=73.03  Aligned_cols=64  Identities=19%  Similarity=0.259  Sum_probs=52.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+..........+.+|+.++..++||||+++
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~   91 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL   91 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcE
Confidence            3568889999999999999999876566669999865544455678899999999999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=7.3e-14  Score=72.57  Aligned_cols=64  Identities=20%  Similarity=0.249  Sum_probs=53.1

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|+..+.||+|+||.||++.....+..+|+|.+... .......+.+|+.++..++||||+++
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l   69 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGF   69 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            46788999999999999999998776777799998543 33345678899999999999999874

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.5e-13  Score=69.73  Aligned_cols=65  Identities=18%  Similarity=0.217  Sum_probs=52.1

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC------ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG------SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~------~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||++.....+..+|+|.+...      .....+.+.+|+.++..++||||+++
T Consensus         8 i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~   78 (293)
T d1jksa_           8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL   78 (293)
T ss_dssp             GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcE
Confidence            445689999999999999999998766666699988432      11235678999999999999999974

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=8.3e-14  Score=70.99  Aligned_cols=63  Identities=21%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||.+.....+..+|+|.+.... ....+.+.+|+.++..++||||+++
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~   68 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKF   68 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCE
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeE
Confidence            46888899999999999999987666666999985432 2234568899999999999999874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.6e-13  Score=70.55  Aligned_cols=63  Identities=24%  Similarity=0.362  Sum_probs=50.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc--cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS--RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||++.....+..+|+|.+....  ....+.+.+|+.++.+++|+||+++
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~   66 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL   66 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEe
Confidence            57888999999999999999987655666999985432  2235678899999999999999874

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=1.9e-13  Score=70.76  Aligned_cols=63  Identities=21%  Similarity=0.344  Sum_probs=51.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..|+..+.||+|+||.||++.....+..+|+|.+....   ....+.+.+|+.++..++||||+++
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~   80 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY   80 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeE
Confidence            34888899999999999999987766777999985432   2234568899999999999999974

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.4e-13  Score=70.63  Aligned_cols=64  Identities=20%  Similarity=0.295  Sum_probs=52.7

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ...++|...+.||+|+||.||++....+..+ |+|.+... ....+.|.+|+.++..++|+|||++
T Consensus        14 i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~v-AiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~   77 (285)
T d1fmka3          14 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQL   77 (285)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTEEE-EEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCHHHEEEeeEEeeCCCeEEEEEEECCCCEE-EEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEE
Confidence            3456789999999999999999998766554 99998543 2345779999999999999999974

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=2.6e-13  Score=69.91  Aligned_cols=70  Identities=17%  Similarity=0.287  Sum_probs=54.8

Q ss_pred             hhHHHhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701            9 ARIAKATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus         9 ~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+++.+.++|+..+.||+|+||.||++....     ....+|+|.+.... ....+.|.+|+.++..++|+|++++
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~   81 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL   81 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccc
Confidence            3455567889999999999999999998743     33556999986433 2335679999999999999999863

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4.3e-13  Score=68.60  Aligned_cols=63  Identities=21%  Similarity=0.313  Sum_probs=48.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCc----EEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSV----EIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~----~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|+..++||+|+||.||++.+....    ..+|+|.+... .......|.+|+.++..++|+|||++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~   74 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL   74 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeee
Confidence            35778899999999999999875422    34699988543 33344578999999999999999874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.42  E-value=3e-14  Score=73.69  Aligned_cols=66  Identities=15%  Similarity=0.230  Sum_probs=49.0

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +..+.|...+.||+|+||.||.+.....+..+|+|.+.... ......+.+|+.++..++||||+++
T Consensus         6 di~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l   72 (307)
T d1a06a_           6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVAL   72 (307)
T ss_dssp             CGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCE
T ss_pred             CCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcE
Confidence            45567899999999999999999987666666999985432 2233557789999999999999874

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=2.7e-13  Score=69.59  Aligned_cols=63  Identities=17%  Similarity=0.219  Sum_probs=51.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||.+.....+..+|+|.+...   .....+.+.+|+.++.+++||||+++
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l   73 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL   73 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEE
Confidence            4688999999999999999998765556699988532   22345678999999999999999874

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=8e-13  Score=68.48  Aligned_cols=63  Identities=24%  Similarity=0.367  Sum_probs=47.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcE----EEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVE----IKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~----~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+|+..+.||+|+||.||++.....+.    .+|+|.+... .....+.+.+|+.++.+++||||+++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l   76 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL   76 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            358889999999999999998754322    3488887543 33456779999999999999999974

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1e-12  Score=68.30  Aligned_cols=63  Identities=21%  Similarity=0.318  Sum_probs=51.6

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      -+.|...+.||+|+||.||++.....+..+|+|.+.... .+...+.+|+.++..++|+||+++
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~   66 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHL   66 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeE
Confidence            356888899999999999999988766677999986533 234568899999999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=4.7e-13  Score=68.16  Aligned_cols=60  Identities=15%  Similarity=0.163  Sum_probs=48.0

Q ss_pred             ccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           19 SSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        19 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .....||+|+||.||++........+|+|.+...  .....+.+.+|+.++..++||||+++
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~   73 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF   73 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeE
Confidence            5567899999999999998765555699987432  33345678999999999999999874

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=8.4e-13  Score=67.65  Aligned_cols=63  Identities=22%  Similarity=0.347  Sum_probs=48.3

Q ss_pred             cCccccee-eeecCCccEEEEEEcC--CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNK-LGEGRFGPVYKVILWH--SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~-ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +++...+. ||+|+||.||+|....  ....+|+|.+... .....+.|.+|+.++..++||||+++
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l   74 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL   74 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            45666664 9999999999997642  3345699998643 33445779999999999999999974

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.39  E-value=1e-12  Score=66.90  Aligned_cols=64  Identities=16%  Similarity=0.033  Sum_probs=51.9

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+....   ....+.+.+|+.++..++||||+++
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~   72 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV   72 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcc
Confidence            456889999999999999999987666666999985432   2234568899999999999999863

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=2.8e-13  Score=68.75  Aligned_cols=63  Identities=27%  Similarity=0.301  Sum_probs=51.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+........+|+|.+...   .......+.+|+.++..++||||+++
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~   71 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL   71 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeE
Confidence            4688889999999999999998766666699987432   22235668899999999999999874

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.8e-13  Score=69.84  Aligned_cols=62  Identities=26%  Similarity=0.400  Sum_probs=49.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||++....  .+ |+|.+...  .....+.|.+|+.++.+++|+||+++
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~v-AvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~   69 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGKWHG--DV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF   69 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEESSS--EE-EEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             ccccEEEEEEEeeCCCcEEEEEEECC--EE-EEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeee
Confidence            45678888999999999999997543  34 99998543  33456789999999999999999863

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=1.1e-12  Score=67.06  Aligned_cols=63  Identities=21%  Similarity=0.357  Sum_probs=51.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+....++..+|+|.+...  .......+.+|+.++..++|+||+++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~   66 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL   66 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEee
Confidence            4578889999999999999998766666799998533  23345678999999999999999863

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.38  E-value=2.9e-13  Score=70.20  Aligned_cols=63  Identities=22%  Similarity=0.354  Sum_probs=51.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||++.....+..+|+|.+...   .....+.+.+|+.++..++||||+++
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~   69 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM   69 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhhe
Confidence            5688899999999999999998765666699998532   22345678899999999999999874

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.37  E-value=8.8e-13  Score=67.36  Aligned_cols=62  Identities=16%  Similarity=0.268  Sum_probs=50.0

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.|...+.||+|+||.||++....+.. +|+|.+...  .....+.+.+|+.++.+++|+||+++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~-vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~   65 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL   65 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCE-EEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCE
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCE-EEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEee
Confidence            467888999999999999998875554 599998543  22235678999999999999999864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.1e-12  Score=68.56  Aligned_cols=65  Identities=12%  Similarity=0.187  Sum_probs=49.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc-cccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS-RQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++.|.....||+|+||.||++.....+..+|+|.+.... ....+.+.+|+.++..++|+|++++
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~   71 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI   71 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcE
Confidence            3456888999999999999999987656666999986432 3345678899999999999999864

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.4e-12  Score=68.08  Aligned_cols=65  Identities=14%  Similarity=0.189  Sum_probs=46.8

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..+.|...+.||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+|++++
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l   82 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL   82 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCC
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEE
Confidence            356788899999999999999998765666699998543  23345678899999999999999874

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=2.4e-12  Score=67.18  Aligned_cols=64  Identities=17%  Similarity=0.229  Sum_probs=52.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+|++++
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~   82 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGL   82 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeE
Confidence            45688899999999999999998766667799998543  23344568899999999999999864

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.8e-12  Score=67.00  Aligned_cols=63  Identities=14%  Similarity=0.242  Sum_probs=50.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+.|...+.||+|+||.||.+.....+..||+|.+...  .......+.+|+.++.+++|+|+++
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~   73 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN   73 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccc
Confidence            46789999999999999999998766666699987432  2234567889999999999999986

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.1e-12  Score=66.77  Aligned_cols=65  Identities=17%  Similarity=0.181  Sum_probs=50.2

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCC---cEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHS---VEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ..++|+..+.||+|+||.||++.....   ...+++|.+... .....+.+.+|+.++..++||||+++
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l   73 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL   73 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            345788899999999999999987532   234588887543 33335679999999999999999874

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.6e-12  Score=67.36  Aligned_cols=64  Identities=16%  Similarity=0.208  Sum_probs=50.3

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .+.|...+.||+|+||.||.+.....+..+|+|.+...  .....+.+.+|+.++..++|+||+++
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~   81 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL   81 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEE
Confidence            35688899999999999999998866667799998543  23344568899999999999999874

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.1e-12  Score=68.56  Aligned_cols=63  Identities=21%  Similarity=0.271  Sum_probs=51.6

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||.+.....+..||+|.+...   .......+.+|+.++..++||||+++
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l   70 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL   70 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            5788999999999999999998766667799998532   22345678899999999999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.32  E-value=1.2e-12  Score=68.74  Aligned_cols=63  Identities=29%  Similarity=0.392  Sum_probs=50.8

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||.+.....+..+|+|.+...   .....+.+.+|+.++..++||||+++
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~  106 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL  106 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeec
Confidence            4688889999999999999998765666699987432   22345678899999999999999863

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5.9e-12  Score=65.13  Aligned_cols=58  Identities=21%  Similarity=0.242  Sum_probs=45.7

Q ss_pred             ceeeeecCCccEEEEEEcCC---cEEEEEEEccC-CccccHHHHHHHHHHHHHcCCCccccC
Q 043701           21 YNKLGEGRFGPVYKVILWHS---VEIKSVKRLSK-GSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        21 ~~~ig~g~~~~v~~~~~~~~---~~~~~~k~~~~-~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++||+|+||.||+|.+...   ...+|+|.+.. ......+.|.+|+.++.+++|+||+++
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~   93 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL   93 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEE
Confidence            47899999999999987542   23458998854 344455779999999999999999975

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.31  E-value=6.2e-12  Score=65.24  Aligned_cols=60  Identities=22%  Similarity=0.331  Sum_probs=49.9

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcC-CCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ++|...+.||+|+||.||++.....+..+|+|.+...   ..+.+.+|+.++..+. |+||+++
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~   95 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITL   95 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEE
Confidence            5688899999999999999998776677799998543   2466889999999985 9999863

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=5.6e-12  Score=64.33  Aligned_cols=57  Identities=26%  Similarity=0.316  Sum_probs=43.5

Q ss_pred             eeeeecCCccEEEEEEcC--CcEEEEEEEccCC--ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           22 NKLGEGRFGPVYKVILWH--SVEIKSVKRLSKG--SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        22 ~~ig~g~~~~v~~~~~~~--~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      +.||+|+||.||+|.+..  ....+|+|.+...  .....+.+.+|+.++.+++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~   73 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM   73 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceE
Confidence            579999999999998653  3355699988532  22335679999999999999999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=3.6e-12  Score=65.45  Aligned_cols=58  Identities=24%  Similarity=0.343  Sum_probs=43.6

Q ss_pred             ceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc-----cHHHHHHHHHHHHHcCCCccccC
Q 043701           21 YNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ-----GMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        21 ~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++||+|+||.||++.....+..+|+|.+......     ..+.+.+|+.++..++|+||+++
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~   65 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL   65 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCE
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEE
Confidence            47899999999999998766666699998543211     13468899999999999999874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.29  E-value=5.5e-12  Score=64.38  Aligned_cols=63  Identities=17%  Similarity=0.162  Sum_probs=49.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc---------cHHHHHHHHHHHHHcC-CCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ---------GMEELKNEVTLIFVSN-YRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---------~~~~~~~~~~~~~~l~-h~niv~l   78 (78)
                      ++|+..+.||+|+||.||++.....+..+|+|.+......         ..+.+.+|+.++.++. |+||+++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~   75 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQL   75 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEE
Confidence            4688899999999999999998766667799998543211         1235788999999996 9999863

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.5e-12  Score=66.02  Aligned_cols=60  Identities=15%  Similarity=0.220  Sum_probs=47.8

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||++... +.. +|+|.+...  ...+.+.+|+.++.+++|+||+++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~-vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~   65 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-GNK-VAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQL   65 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEE-EEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-CeE-EEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeE
Confidence            456778899999999999999884 444 499998543  235679999999999999999874

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=3.9e-12  Score=65.68  Aligned_cols=63  Identities=17%  Similarity=0.325  Sum_probs=46.2

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcE--EEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVE--IKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~--~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||++.......  .+++|.+... .....+.+.+|+.++.++ +|+||+++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~   76 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL   76 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeE
Confidence            467888999999999999998764332  3477776433 333456799999999998 79999874

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=2.6e-12  Score=66.35  Aligned_cols=68  Identities=21%  Similarity=0.293  Sum_probs=51.4

Q ss_pred             HHHhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           11 IAKATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        11 ~~~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++...++|...+.||+|+||.||++.+..     ....+|+|.+... .......+.+|+.++.+++|+||+++
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~   88 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL   88 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeee
Confidence            33445678888999999999999997642     1244599998543 33344568999999999999999863

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=4.9e-12  Score=64.42  Aligned_cols=63  Identities=24%  Similarity=0.331  Sum_probs=42.1

Q ss_pred             cCcccceeeeecCCccEEEEEEcC---CcEEEEEEEccCC---ccccHHHHHHHHHHHHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWH---SVEIKSVKRLSKG---SRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      ++|+..+.||+|+||.||++....   ....+|+|.+...   .....+.|.+|+.++..++|+||+++
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~   76 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRL   76 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            458888999999999999997642   2234589987543   22335679999999999999999874

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=1.2e-11  Score=64.22  Aligned_cols=63  Identities=24%  Similarity=0.329  Sum_probs=48.4

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCC---ccccHHHHHHHHHHHH-HcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKG---SRQGMEELKNEVTLIF-VSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~~~~~~~-~l~h~niv~l   78 (78)
                      ++|...+.||+|+||.||++.....+..+|+|.+...   .....+.+..|..++. .++||||+++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~   68 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM   68 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            5788899999999999999999877777799998532   1223455667776655 6799999874

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.6e-11  Score=63.42  Aligned_cols=67  Identities=21%  Similarity=0.261  Sum_probs=51.5

Q ss_pred             HHhhcCcccceeeeecCCccEEEEEEc-----CCcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           12 AKATDNFSSYNKLGEGRFGPVYKVILW-----HSVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        12 ~~~~~~~~~~~~ig~g~~~~v~~~~~~-----~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      +...++|+..+.||+|+||.||++...     .....+|+|.+... .......+.+|+.++.++ +|+||+++
T Consensus        19 ~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~   92 (311)
T d1t46a_          19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNL   92 (311)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEE
Confidence            344567888999999999999999763     23455699998643 333456789999999998 69999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=9.5e-12  Score=64.63  Aligned_cols=65  Identities=20%  Similarity=0.267  Sum_probs=47.5

Q ss_pred             hhcCcccceeeeecCCccEEEEEEcCC-----cEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILWHS-----VEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-----~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|...+.||+|+||.||++.....     ...+|+|.+... .......+.+|+.++.++ +|+|||++
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l  106 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNL  106 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEE
Confidence            446788899999999999999987532     223588887433 334456789999999988 89999874

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=1.5e-11  Score=64.42  Aligned_cols=58  Identities=21%  Similarity=0.399  Sum_probs=46.0

Q ss_pred             CcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCccccC
Q 043701           17 NFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLHM   78 (78)
Q Consensus        17 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~l   78 (78)
                      .|...++||+|+||.||.+.....+..+|+|.+.....    ...+|+.++.+++|+|++++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~   78 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRL   78 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcE
Confidence            46777889999999999999986666679999854321    22368999999999999863

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=4.9e-11  Score=61.24  Aligned_cols=65  Identities=17%  Similarity=0.240  Sum_probs=46.7

Q ss_pred             hhcCcccceeeeecCCccEEEEEEc-CCcEEEEEEEccCC--ccccHHHHHHHHHHHHHc---CCCccccC
Q 043701           14 ATDNFSSYNKLGEGRFGPVYKVILW-HSVEIKSVKRLSKG--SRQGMEELKNEVTLIFVS---NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~~~l---~h~niv~l   78 (78)
                      ..+.|+..+.||+|+||.||++... .+...+|+|.+...  .......+.+|+.++..+   +||||+++
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~   75 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL   75 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCE
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCccee
Confidence            3467999999999999999999885 44566699987432  222233466777766655   79999863

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.2e-11  Score=62.91  Aligned_cols=63  Identities=21%  Similarity=0.271  Sum_probs=47.7

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCcc------ccHHHHHHHHHHHHHcC--CCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSR------QGMEELKNEVTLIFVSN--YRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~~~~~~l~--h~niv~l   78 (78)
                      +.|...+.||+|+||.||.+.....+..+|+|.+.....      .....+.+|+.++..+.  |+||+++
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~   74 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL   74 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEE
Confidence            468888999999999999999876556669998743211      11234668999999886  8999863

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.13  E-value=3.8e-11  Score=63.28  Aligned_cols=64  Identities=27%  Similarity=0.409  Sum_probs=45.5

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCc---cccHHHHHHH---HHHHHHcCCCccccC
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGS---RQGMEELKNE---VTLIFVSNYRLLLHM   78 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~~---~~~~~~l~h~niv~l   78 (78)
                      .++|...+.||+|+||.||.+.....+..+|+|.+....   ......+..+   +.++..+.||||+++
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l   72 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM   72 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence            357889999999999999999987666666999884321   1112223333   556667789999863

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=2.8e-10  Score=59.34  Aligned_cols=60  Identities=20%  Similarity=0.281  Sum_probs=45.7

Q ss_pred             hhcCcccc-eeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           14 ATDNFSSY-NKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        14 ~~~~~~~~-~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ..++|... +.||+|+||.||.+.....+..+|+|.+..     ...+.+|+.++.++ +|+||+++
T Consensus         9 i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l   70 (335)
T d2ozaa1           9 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRI   70 (335)
T ss_dssp             GGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCE
T ss_pred             cccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeE
Confidence            34678765 469999999999999876566669998843     34566788876655 89999864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=2.6e-10  Score=58.55  Aligned_cols=66  Identities=21%  Similarity=0.302  Sum_probs=44.4

Q ss_pred             HhhcCcccceeeeecCCccEEEEEEcCC-------cEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCccccC
Q 043701           13 KATDNFSSYNKLGEGRFGPVYKVILWHS-------VEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLHM   78 (78)
Q Consensus        13 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~-------~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~l   78 (78)
                      ...+.|...+.||+|+||.||.+.....       ...+|+|.+... .......+..|...+.++ +|+||+++
T Consensus        10 i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~   84 (299)
T d1fgka_          10 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINL   84 (299)
T ss_dssp             CCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEec
Confidence            3456788889999999999999976432       235699988543 333456788888888888 79999864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.5e-11  Score=61.75  Aligned_cols=63  Identities=22%  Similarity=0.349  Sum_probs=47.7

Q ss_pred             cCcccceeeeecCCccEEEEEEc---CCcEEEEEEEccCC----ccccHHHHHHHHHHHHHcCC-CccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILW---HSVEIKSVKRLSKG----SRQGMEELKNEVTLIFVSNY-RLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~~~l~h-~niv~l   78 (78)
                      ++|...+.||+|+||.||++...   ..+..+|+|.+...    .....+.+.+|+.++.+++| +||+++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~   94 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL   94 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEe
Confidence            56888999999999999999763   23456699988532    12234568889999999966 788863

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.01  E-value=1.1e-09  Score=56.03  Aligned_cols=61  Identities=16%  Similarity=0.145  Sum_probs=47.1

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      .+.|+..+.||+|+||.||.+.....+..+|+|.+....  ....+..|++++..+.|+|++.
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~   66 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIP   66 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCC
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCccc
Confidence            346889999999999999999987666666999874322  1234778999999998877653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=7e-10  Score=56.85  Aligned_cols=69  Identities=19%  Similarity=0.292  Sum_probs=48.8

Q ss_pred             hhHHHhhcCcccceeeeecCCccEEEEEEcC-----CcEEEEEEEccCC-ccccHHHHHHHHHHHHHc-CCCcccc
Q 043701            9 ARIAKATDNFSSYNKLGEGRFGPVYKVILWH-----SVEIKSVKRLSKG-SRQGMEELKNEVTLIFVS-NYRLLLH   77 (78)
Q Consensus         9 ~~~~~~~~~~~~~~~ig~g~~~~v~~~~~~~-----~~~~~~~k~~~~~-~~~~~~~~~~~~~~~~~l-~h~niv~   77 (78)
                      .+++...++|...+.||+|+||.||++....     ....+|+|.+... .....+.+..+...+.++ +|+|++.
T Consensus         6 ~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~   81 (299)
T d1ywna1           6 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   81 (299)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             ccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            4444556789999999999999999998643     2345699998543 333456677888877776 6888875

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=4e-10  Score=58.03  Aligned_cols=58  Identities=19%  Similarity=0.229  Sum_probs=40.5

Q ss_pred             cCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHH--HHHcCCCccccC
Q 043701           16 DNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTL--IFVSNYRLLLHM   78 (78)
Q Consensus        16 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~--~~~l~h~niv~l   78 (78)
                      ..+...+.||+|+||.||++... +. .+|+|.+...   ....+..+.++  +..++|+||+++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~-g~-~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~   62 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWR-GE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF   62 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET-TE-EEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEEC-CE-EEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcce
Confidence            35667789999999999999863 44 4599988532   23344444444  456789999873

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.91  E-value=2e-09  Score=55.10  Aligned_cols=61  Identities=15%  Similarity=0.182  Sum_probs=45.7

Q ss_pred             hcCcccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCC-Ccccc
Q 043701           15 TDNFSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNY-RLLLH   77 (78)
Q Consensus        15 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h-~niv~   77 (78)
                      .++|...+.||+|+||.||.+.....+..+|+|.+....  ....+..|++.+..+.| +|++.
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~   65 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPN   65 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCC
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCE
Confidence            357889999999999999999987666666999874322  22346678888888865 66653

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.91  E-value=2e-09  Score=56.23  Aligned_cols=57  Identities=19%  Similarity=0.125  Sum_probs=44.3

Q ss_pred             cccceeeeecCCccEEEEEEcCCcEEEEEEEccCCccccHHHHHHHHHHHHHcCCCcc
Q 043701           18 FSSYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQGMEELKNEVTLIFVSNYRLL   75 (78)
Q Consensus        18 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~h~ni   75 (78)
                      |...+.||+|+||.||++.....+..+|+|.+.... ...+.+.+|+.++..+.|+|+
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~   71 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADN   71 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhh
Confidence            888999999999999999987666677999986532 224567788888887766543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.30  E-value=4e-06  Score=40.20  Aligned_cols=57  Identities=18%  Similarity=0.105  Sum_probs=37.3

Q ss_pred             cceeeeecCCccEEEEEEcCCcEEEEEEEccCCccc------------------cHHHHHHHHHHHHHcCCCcccc
Q 043701           20 SYNKLGEGRFGPVYKVILWHSVEIKSVKRLSKGSRQ------------------GMEELKNEVTLIFVSNYRLLLH   77 (78)
Q Consensus        20 ~~~~ig~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------------~~~~~~~~~~~~~~l~h~niv~   77 (78)
                      ..+.||+|+||.||.+....+..+ |+|.++.....                  .......|...+..+.|.+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~v-AvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~   78 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGEC-VVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK   78 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEE-EEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC
T ss_pred             hCCEeeeCcceEEEEEECCCCCEE-EEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcce
Confidence            468899999999999988766554 99976421100                  0112344666777788877653