BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043702
(711 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 231 bits (590), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 184/299 (61%), Gaps = 13/299 (4%)
Query: 368 KEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ--GKDEFLS 425
K FS REL+ A+ F+ I+G G FG VYKG L +G ++AVKR G+ +F +
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERXQGGELQFQT 84
Query: 426 ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE---ARSPLPWPHRSKI 482
E+ +I HRNL+RL+G+C E LLVY M NGS+ L E ++ PL WP R +I
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
LG A LAYLH C+ ++IHRDVK +NI+LDE F A +GDFGLA+ +++
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASN--LVEW 600
GT+G++APEYL TG+++EKTDVF YG ++LE+ +G+R + + ++ + L++W
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD-----LARLANDDDVMLLDW 259
Query: 601 VWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEA 659
V L +E +L D L+G + + E+ +++ V L C+ P+ RP M VV+ML G+
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 124/299 (41%), Positives = 184/299 (61%), Gaps = 13/299 (4%)
Query: 368 KEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN-SQGKD-EFLS 425
K FS REL+ A+ F I+G G FG VYKG L +G ++AVKR +QG + +F +
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLA-DGXLVAVKRLKEERTQGGELQFQT 76
Query: 426 ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE---ARSPLPWPHRSKI 482
E+ +I HRNL+RL+G+C E LLVY M NGS+ L E ++ PL WP R +I
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
LG A LAYLH C+ ++IHRDVK +NI+LDE F A +GDFGLA+ +++
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 196
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASN--LVEW 600
G +G++APEYL TG+++EKTDVF YG ++LE+ +G+R + + ++ + L++W
Sbjct: 197 GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD-----LARLANDDDVMLLDW 251
Query: 601 VWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEA 659
V L +E +L D L+G + + E+ +++ V L C+ P+ RP M VV+ML G+
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 157/293 (53%), Gaps = 16/293 (5%)
Query: 371 SYR----ELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
SYR +L AT F+ +IGHG FG VYKG+L + +R +SQG +EF +E
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKIL 483
+ + RH +LV L G+C E+ E++L+Y M NG+L + L+ + P + W R +I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 484 LGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ-VEHDKSPDATVAA 542
+G A L YLH +IHRDVK+ NI+LDE F ++ DFG++++ E D++ V
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVW 602
GT+GY+ PEY + GR TEK+DV+S+G V+ EV R I + + NL EW
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-----REMVNLAEWAV 257
Query: 603 SLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
H G+L D L + +R+ + C RP+M V+ L
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 156/293 (53%), Gaps = 16/293 (5%)
Query: 371 SYR----ELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
SYR +L AT F+ +IGHG FG VYKG+L + +R +SQG +EF +E
Sbjct: 26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETE 85
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKIL 483
+ + RH +LV L G+C E+ E++L+Y M NG+L + L+ + P + W R +I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 484 LGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ-VEHDKSPDATVAA 542
+G A L YLH +IHRDVK+ NI+LDE F ++ DFG++++ E ++ V
Sbjct: 146 IGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK 202
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVW 602
GT+GY+ PEY + GR TEK+DV+S+G V+ EV R I + + NL EW
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP-----REMVNLAEWAV 257
Query: 603 SLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
H G+L D L + +R+ + C RP+M V+ L
Sbjct: 258 ESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 152/315 (48%), Gaps = 57/315 (18%)
Query: 370 FSYRELRSATKCFNANRI------IGHGAFGTVYKGILPQNGDIIAVKRCSH-----NSQ 418
FS+ EL++ T F+ I +G G FG VYKG + N +AVK+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 72
Query: 419 GKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL--FEARSPLPW 476
K +F E+ ++ +H NLV L G+ + ++ LVY MPNGSL L + PL W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 477 PHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKS 535
R KI G A+ + +LH EN IHRD+K++NI+LDE F A++ DFGLAR E ++
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 536 PDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVAS 595
+ GT Y+APE L G T K+D++S+G V+LE+ +G +++
Sbjct: 190 VMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE------------ 236
Query: 596 NLVEWVWSLHREGRLLTAA---------------DARLEGQFDEAEMRRVLLVGLACSHP 640
HRE +LL D ++ D + + V C H
Sbjct: 237 ---------HREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHE 286
Query: 641 DPLARPTMRGVVQML 655
RP ++ V Q+L
Sbjct: 287 KKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 151/315 (47%), Gaps = 57/315 (18%)
Query: 370 FSYRELRSATKCFNANRI------IGHGAFGTVYKGILPQNGDIIAVKRCSH-----NSQ 418
FS+ EL++ T F+ I +G G FG VYKG + N +AVK+ + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 72
Query: 419 GKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL--FEARSPLPW 476
K +F E+ ++ +H NLV L G+ + ++ LVY MPNGSL L + PL W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 477 PHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKS 535
R KI G A+ + +LH EN IHRD+K++NI+LDE F A++ DFGLAR E ++
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 536 PDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVAS 595
GT Y+APE L G T K+D++S+G V+LE+ +G +++
Sbjct: 190 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE------------ 236
Query: 596 NLVEWVWSLHREGRLLTAA---------------DARLEGQFDEAEMRRVLLVGLACSHP 640
HRE +LL D ++ D + + V C H
Sbjct: 237 ---------HREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHE 286
Query: 641 DPLARPTMRGVVQML 655
RP ++ V Q+L
Sbjct: 287 KKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 150/315 (47%), Gaps = 57/315 (18%)
Query: 370 FSYRELRSATKCFNANRI------IGHGAFGTVYKGILPQNGDIIAVKRCSH-----NSQ 418
FS+ EL++ T F+ I +G G FG VYKG + N +AVK+ + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 66
Query: 419 GKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL--FEARSPLPW 476
K +F E+ ++ +H NLV L G+ + ++ LVY MPNGSL L + PL W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 477 PHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKS 535
R KI G A+ + +LH EN IHRD+K++NI+LDE F A++ DFGLAR E +
Sbjct: 127 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 536 PDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVAS 595
GT Y+APE L G T K+D++S+G V+LE+ +G +++
Sbjct: 184 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE------------ 230
Query: 596 NLVEWVWSLHREGRLLTAA---------------DARLEGQFDEAEMRRVLLVGLACSHP 640
HRE +LL D ++ D + + V C H
Sbjct: 231 ---------HREPQLLLDIKEEIEDEEKTIEDYIDKKMNDA-DSTSVEAMYSVASQCLHE 280
Query: 641 DPLARPTMRGVVQML 655
RP ++ V Q+L
Sbjct: 281 KKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 146/314 (46%), Gaps = 55/314 (17%)
Query: 370 FSYRELRSATKCFNANRI------IGHGAFGTVYKGILPQNGDIIAVKRCSH-----NSQ 418
FS+ EL++ T F+ I G G FG VYKG + N +AVK+ + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEE 63
Query: 419 GKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DK-ALFEARSPLPW 476
K +F E+ + +H NLV L G+ + ++ LVY PNGSL D+ + + PL W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 477 PHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKS 535
R KI G A+ + +LH EN IHRD+K++NI+LDE F A++ DFGLAR E +
Sbjct: 124 HXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 536 PDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVAS 595
+ GT Y APE L G T K+D++S+G V+LE+ +G +++
Sbjct: 181 VXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE------------ 227
Query: 596 NLVEWVWSLHREGRLLTAADA--------------RLEGQFDEAEMRRVLLVGLACSHPD 641
HRE +LL + D + V C H
Sbjct: 228 ---------HREPQLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEK 278
Query: 642 PLARPTMRGVVQML 655
RP ++ V Q+L
Sbjct: 279 KNKRPDIKKVQQLL 292
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 12/209 (5%)
Query: 381 CFNANRIIGHGAFGTVYKGILPQNGDI----IAVK--RCSHNSQGKDEFLSELSIIGTLR 434
C ++IG G FG VYKG+L + +A+K + + + + +FL E I+G
Sbjct: 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++RL+G + ++++ + M NG+LDK L E +L G+A+ + YL
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL- 163
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEY 552
+HRD+ NI+++ ++ DFGL+R +E D T + G + + APE
Sbjct: 164 --ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 553 LLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ + T +DV+S+G V+ EV + G RP
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 13/210 (6%)
Query: 381 CFNANRIIGHGAFGTVYKGILPQNGD---IIAVK--RCSHNSQGKDEFLSELSIIGTLRH 435
C ++IG G FG V G L G +A+K + + + + +FLSE SI+G H
Sbjct: 34 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 93
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
N++ L+G + ++++ + M NGSLD L + +L G+A+ + YL
Sbjct: 94 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL-- 151
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS-PDATVAAG---TMGYLAPE 551
+ +HRD+ NI+++ ++ DFGL+R +E D S P T A G + + APE
Sbjct: 152 -ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 552 YLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ + T +DV+SYG V+ EV S G RP
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGLAR +E D T G + + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG V+ G N D +A+K S +D+F+ E ++ L H LV+L G C E
Sbjct: 35 IGSGQFGLVHLGYW-LNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I LV++ M +G L L R + L V +AYL + C VIHRD+
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 150
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++ E ++ DFG+ R V D+ +T + + +PE R + K+DV+S+
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 210
Query: 568 GAVVLEVAS-GRRPIE 582
G ++ EV S G+ P E
Sbjct: 211 GVLMWEVFSEGKIPYE 226
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 137
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 137
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 198 FTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DM 154
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 215 FTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 48 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 164
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 225 FTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E D T G + + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 114/204 (55%), Gaps = 9/204 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNL 438
N IG G+FGTV++ +G +AVK +++ +EFL E++I+ LRH N+
Sbjct: 39 LNIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE--ARSPLPWPHRSKILLGVASALAYLHQE 496
V G + + +V + + GSL + L + AR L R + VA + YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
++HRD+K+ N+++D+ + ++ DFGL+R ++ + AAGT ++APE L
Sbjct: 157 -NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 557 RATEKTDVFSYGAVVLEVASGRRP 580
+ EK+DV+S+G ++ E+A+ ++P
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQP 238
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 11/204 (5%)
Query: 385 NRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++++G G FG V G LP +I +A+K + + + + +FL E SI+G H N++
Sbjct: 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL+G + +++V + M NGSLD L + + +L G+AS + YL +
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDM 166
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL R +E D T G + + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +DV+SYG V+ EV S G RP
Sbjct: 227 FTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 381 CFNANRIIGHGAFGTVYKG--ILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTLRH 435
C R+IG G FG V G LP D+ +A+K + + + + +FL E SI+G H
Sbjct: 44 CIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDH 103
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
N+V L+G +++V + M NG+LD L + +L G+A+ + YL
Sbjct: 104 PNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL-- 161
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYL 553
+ +HRD+ NI+++ ++ DFGL+R +E D T G + + APE +
Sbjct: 162 -ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 554 LTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ T +DV+SYG V+ EV S G RP
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG V+ G N D +A+K + +++F+ E ++ L H LV+L G C E
Sbjct: 15 IGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I LV++ M +G L L R + L V +AYL + C VIHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 130
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++ E ++ DFG+ R V D+ +T + + +PE R + K+DV+S+
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 568 GAVVLEVAS-GRRPIE 582
G ++ EV S G+ P E
Sbjct: 191 GVLMWEVFSEGKIPYE 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG V+ G N D +A+K + +++F+ E ++ L H LV+L G C E
Sbjct: 13 IGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I LV++ M +G L L R + L V +AYL + C VIHRD+
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 128
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++ E ++ DFG+ R V D+ +T + + +PE R + K+DV+S+
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 188
Query: 568 GAVVLEVAS-GRRPIE 582
G ++ EV S G+ P E
Sbjct: 189 GVLMWEVFSEGKIPYE 204
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 381 CFNANRIIGHGAFGTVYKGILPQNGD---IIAVK--RCSHNSQGKDEFLSELSIIGTLRH 435
C ++IG G FG V G L G +A+K + + + + +FLSE SI+G H
Sbjct: 8 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 67
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
N++ L+G + ++++ + M NGSLD L + +L G+A+ + YL
Sbjct: 68 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL-- 125
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS-PDATVAAG---TMGYLAPE 551
+ +HR + NI+++ ++ DFGL+R +E D S P T A G + + APE
Sbjct: 126 -ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 552 YLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ + T +DV+SYG V+ EV S G RP
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 99/196 (50%), Gaps = 5/196 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG V+ G N D +A+K + +++F+ E ++ L H LV+L G C E
Sbjct: 18 IGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I LV++ M +G L L R + L V +AYL + C VIHRD+
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 133
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++ E ++ DFG+ R V D+ +T + + +PE R + K+DV+S+
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 193
Query: 568 GAVVLEVAS-GRRPIE 582
G ++ EV S G+ P E
Sbjct: 194 GVLMWEVFSEGKIPYE 209
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 381 CFNANRIIGHGAFGTVYKGILPQNGD---IIAVK--RCSHNSQGKDEFLSELSIIGTLRH 435
C ++IG G FG V G L G +A+K + + + + +FLSE SI+G H
Sbjct: 9 CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 68
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
N++ L+G + ++++ + M NGSLD L + +L G+ S + YL
Sbjct: 69 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS- 127
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYL 553
+ +HRD+ NI+++ ++ DFG++R +E D T G + + APE +
Sbjct: 128 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 554 LTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ T +DV+SYG V+ EV S G RP
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 381 CFNANRIIGHGAFGTVYKGILPQNGD---IIAVK--RCSHNSQGKDEFLSELSIIGTLRH 435
C ++IG G FG V G L G +A+K + + + + +FLSE SI+G H
Sbjct: 30 CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 89
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
N++ L+G + ++++ + M NGSLD L + +L G+ S + YL
Sbjct: 90 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS- 148
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYL 553
+ +HRD+ NI+++ ++ DFG++R +E D T G + + APE +
Sbjct: 149 --DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 554 LTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ T +DV+SYG V+ EV S G RP
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 381 CFNANRIIGHGAFGTVYKGILPQNGD---IIAVK--RCSHNSQGKDEFLSELSIIGTLRH 435
C R+IG G FG V G L G +A+K + + + + +FL E SI+G H
Sbjct: 23 CITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 82
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
N++ L+G + +++V + M NGSLD L + +L G+++ + YL
Sbjct: 83 PNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL-- 140
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYL 553
+ +HRD+ NI+++ ++ DFGL+R +E D T G + + APE +
Sbjct: 141 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 554 LTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ T +DV+SYG V+ EV S G RP
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 114/204 (55%), Gaps = 9/204 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNL 438
N IG G+FGTV++ +G +AVK +++ +EFL E++I+ LRH N+
Sbjct: 39 LNIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE--ARSPLPWPHRSKILLGVASALAYLHQE 496
V G + + +V + + GSL + L + AR L R + VA + YLH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
++HR++K+ N+++D+ + ++ DFGL+R ++ + AAGT ++APE L
Sbjct: 157 -NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR-LKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 557 RATEKTDVFSYGAVVLEVASGRRP 580
+ EK+DV+S+G ++ E+A+ ++P
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQP 238
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 381 CFNANRIIGHGAFGTVYKGILPQNGD---IIAVK--RCSHNSQGKDEFLSELSIIGTLRH 435
C ++IG G FG V G L G +A+K + + + + +FLSE SI+G H
Sbjct: 15 CIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDH 74
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
N++ L+G + ++++ + M NGSLD L + +L G+ S + YL
Sbjct: 75 PNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS- 133
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--YLAPEYL 553
+ +HRD+ NI+++ ++ DFG++R +E D T G + + APE +
Sbjct: 134 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 554 LTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ T +DV+SYG V+ EV S G RP
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 387 IIGHGAFGTVYKGILPQNGD---IIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRL 441
+IG G FG V +G L G +A+K + + + + EFLSE SI+G H N++RL
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 80
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQV 501
+G ++++ + M NG+LD L +L G+AS + YL E
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSY 137
Query: 502 IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS-PDATVAAG---TMGYLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E + S P T + G + + APE + +
Sbjct: 138 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK 197
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +D +SYG V+ EV S G RP
Sbjct: 198 FTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 387 IIGHGAFGTVYKGILPQNGD---IIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRL 441
+IG G FG V +G L G +A+K + + + + EFLSE SI+G H N++RL
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQV 501
+G ++++ + M NG+LD L +L G+AS + YL E
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSY 139
Query: 502 IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS-PDATVAAG---TMGYLAPEYLLTGR 557
+HRD+ NI+++ ++ DFGL+R +E + S P T + G + + APE + +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
T +D +SYG V+ EV S G RP
Sbjct: 200 FTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 5/196 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG V+ G N D +A+K + +++F+ E ++ L H LV+L G C E
Sbjct: 16 IGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I LV + M +G L L R + L V +AYL + C VIHRD+
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLA 131
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++ E ++ DFG+ R V D+ +T + + +PE R + K+DV+S+
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 191
Query: 568 GAVVLEVAS-GRRPIE 582
G ++ EV S G+ P E
Sbjct: 192 GVLMWEVFSEGKIPYE 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 5/196 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG V+ G N D +A+K + +++F+ E ++ L H LV+L G C E
Sbjct: 15 IGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I LV++ M +G L L R + L V +AYL E VIHRD+
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLA 130
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++ E ++ DFG+ R V D+ +T + + +PE R + K+DV+S+
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSF 190
Query: 568 GAVVLEVAS-GRRPIE 582
G ++ EV S G+ P E
Sbjct: 191 GVLMWEVFSEGKIPYE 206
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 30/228 (13%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKRCSHN-----SQGKDEFLSELSIIGTLRHRNLVRL 441
IIG G FG VY+ GD +AVK H+ SQ + E + L+H N++ L
Sbjct: 14 IIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQEC 497
+G C ++ + LV + G L++ L R P IL+ +A + YLH E
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP------PDILVNWAVQIARGMNYLHDEA 125
Query: 498 ENQVIHRDVKTSNIMLDEGFN--------ARLGDFGLARQVEHDKSPDATVAAGTMGYLA 549
+IHRD+K+SNI++ + ++ DFGLAR+ AAG ++A
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYAWMA 182
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVG-KVGVASN 596
PE + ++ +DV+SYG ++ E+ +G P + I G+ GVA N
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPF-RGIDGLAVAYGVAMN 229
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V G D+ A+K S +DEF+ E ++ L H LV+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I ++ + M NG L L E R ++ V A+ YL + Q +HRD+
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 131
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++++ ++ DFGL+R V D+ + + + + PE L+ + + K+D++++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 191
Query: 568 GAVVLEVAS-GRRPIEK 583
G ++ E+ S G+ P E+
Sbjct: 192 GVLMWEIYSLGKMPYER 208
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V G D+ A+K S +DEF+ E ++ L H LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I ++ + M NG L L E R ++ V A+ YL + Q +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 132
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++++ ++ DFGL+R V D+ + + + + PE L+ + + K+D++++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 568 GAVVLEVAS-GRRPIEK 583
G ++ E+ S G+ P E+
Sbjct: 193 GVLMWEIYSLGKMPYER 209
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V G D+ A+K S +DEF+ E ++ L H LV+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I ++ + M NG L L E R ++ V A+ YL + Q +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 147
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++++ ++ DFGL+R V D+ + + + + PE L+ + + K+D++++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 568 GAVVLEVAS-GRRPIEK 583
G ++ E+ S G+ P E+
Sbjct: 208 GVLMWEIYSLGKMPYER 224
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V G D+ A+K S +DEF+ E ++ L H LV+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I ++ + M NG L L E R ++ V A+ YL + Q +HRD+
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 127
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++++ ++ DFGL+R V D+ + + + + PE L+ + + K+D++++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 187
Query: 568 GAVVLEVAS-GRRPIEK 583
G ++ E+ S G+ P E+
Sbjct: 188 GVLMWEIYSLGKMPYER 204
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V G D+ A+K S +DEF+ E ++ L H LV+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I ++ + M NG L L E R ++ V A+ YL + Q +HRD+
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 138
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++++ ++ DFGL+R V D+ + + + + PE L+ + + K+D++++
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 198
Query: 568 GAVVLEVAS-GRRPIEK 583
G ++ E+ S G+ P E+
Sbjct: 199 GVLMWEIYSLGKMPYER 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V G D+ A+K S +DEF+ E ++ L H LV+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I ++ + M NG L L E R ++ V A+ YL + Q +HRD+
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 147
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++++ ++ DFGL+R V D+ + + + + PE L+ + + K+D++++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAF 207
Query: 568 GAVVLEVAS-GRRPIEK 583
G ++ E+ S G+ P E+
Sbjct: 208 GVLMWEIYSLGKMPYER 224
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 5/197 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V G D+ A+K S +DEF+ E ++ L H LV+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I ++ + M NG L L E R ++ V A+ YL + Q +HRD+
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLA 132
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++++ ++ DFGL+R V D+ + + + + PE L+ + + K+D++++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAF 192
Query: 568 GAVVLEVAS-GRRPIEK 583
G ++ E+ S G+ P E+
Sbjct: 193 GVLMWEIYSLGKMPYER 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 385 NRIIGHGAFGTVYKGILP-QNGDII--AVKRCSHNS--QGKDEFLSELSIIGTLRHRNLV 439
NRI+G G FG VY+G+ G+ I AVK C + K++F+SE I+ L H ++V
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+L G E+ ++ +L P G L L ++ L L + A+AYL
Sbjct: 73 KLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 128
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
+HRD+ NI++ +LGDFGL+R +E + A+V + +++PE + R T
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 560 EKTDVFSYGAVVLEVAS-GRRPI----EKEITGVGKVG 592
+DV+ + + E+ S G++P K++ GV + G
Sbjct: 189 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 226
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 385 NRIIGHGAFGTVYKGILP-QNGDII--AVKRCSHNS--QGKDEFLSELSIIGTLRHRNLV 439
NRI+G G FG VY+G+ G+ I AVK C + K++F+SE I+ L H ++V
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+L G E+ ++ +L P G L L ++ L L + A+AYL
Sbjct: 89 KLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 144
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
+HRD+ NI++ +LGDFGL+R +E + A+V + +++PE + R T
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 560 EKTDVFSYGAVVLEVAS-GRRPI----EKEITGVGKVG 592
+DV+ + + E+ S G++P K++ GV + G
Sbjct: 205 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 242
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 14/218 (6%)
Query: 385 NRIIGHGAFGTVYKGILP-QNGDII--AVKRCSHNS--QGKDEFLSELSIIGTLRHRNLV 439
NRI+G G FG VY+G+ G+ I AVK C + K++F+SE I+ L H ++V
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+L G E+ ++ +L P G L L ++ L L + A+AYL
Sbjct: 77 KLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---I 132
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
+HRD+ NI++ +LGDFGL+R +E + A+V + +++PE + R T
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 560 EKTDVFSYGAVVLEVAS-GRRPI----EKEITGVGKVG 592
+DV+ + + E+ S G++P K++ GV + G
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 230
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G + K L + S + + +A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYC 129
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMI 183
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 106/197 (53%), Gaps = 11/197 (5%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G+G FG V+ G NG+ +A+K + + FL E I+ L+H LV+L
Sbjct: 17 LGNGQFGEVWMGTW--NGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 447 EKGEILLVYDLMPNGSLDKALF--EARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
E+ I +V + M GSL L E R+ L P+ + VA+ +AY+ + IHR
Sbjct: 75 EE-PIYIVTEYMNKGSLLDFLKDGEGRA-LKLPNLVDMAAQVAAGMAYIER---MNYIHR 129
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDV 564
D++++NI++ G ++ DFGLAR +E ++ A + + APE L GR T K+DV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 565 FSYGAVVLE-VASGRRP 580
+S+G ++ E V GR P
Sbjct: 190 WSFGILLTELVTKGRVP 206
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 134/309 (43%), Gaps = 35/309 (11%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLV 439
K ++G GAFG V K +A+K+ S+ K F+ EL + + H N+V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIV 65
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPW---PHRSKILLGVASALAYLHQE 496
+L G C + LV + GSL L A PLP+ H L + +AYLH
Sbjct: 66 KLYGAC--LNPVCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 497 CENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
+IHRD+K N++L G ++ DFG A ++ T G+ ++APE
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEG 178
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAAD 615
+EK DVFS+G ++ EV + R+P + EI G +W++H R +
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFD-EIGGPA--------FRIMWAVHNGTRPPLIKN 229
Query: 616 ARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRAKPSMTFST 675
+ E+ M R C DP RP+M +V+++ P A + +
Sbjct: 230 L---PKPIESLMTR-------CWSKDPSQRPSMEEIVKIMTHLMRY--FPGADEPLQYPC 277
Query: 676 SHLLLSLQD 684
H L +D
Sbjct: 278 QHSLPPGED 286
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 134/309 (43%), Gaps = 35/309 (11%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLV 439
K ++G GAFG V K +A+K+ S+ K F+ EL + + H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERK-AFIVELRQLSRVNHPNIV 64
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPW---PHRSKILLGVASALAYLHQE 496
+L G C + LV + GSL L A PLP+ H L + +AYLH
Sbjct: 65 KLYGAC--LNPVCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 497 CENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
+IHRD+K N++L G ++ DFG A ++ T G+ ++APE
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----MTNNKGSAAWMAPEVFEG 177
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAAD 615
+EK DVFS+G ++ EV + R+P + EI G +W++H R +
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFD-EIGGPA--------FRIMWAVHNGTRPPLIKN 228
Query: 616 ARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRAKPSMTFST 675
+ E+ M R C DP RP+M +V+++ P A + +
Sbjct: 229 L---PKPIESLMTR-------CWSKDPSQRPSMEEIVKIMTHLMRY--FPGADEPLQYPC 276
Query: 676 SHLLLSLQD 684
H L +D
Sbjct: 277 QHSLPPGED 285
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 4 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 50
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 51 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGK 109
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 110 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 166
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 167 NEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 373 RELRSATKCFNANRI-----IGHGAFGTVYKGIL--PQNGDI-IAVK--RCSHNSQGKDE 422
R RS T+ A+RI IG G G V G L P D+ +A+K + + + + +
Sbjct: 37 RAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 423 FLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKI 482
FLSE SI+G H N++RL+G ++V + M NGSLD L +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
L GV + + YL + +HRD+ N+++D ++ DFGL+R +E D T
Sbjct: 157 LRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 543 GTMG--YLAPEYLLTGRATEKTDVFSYGAVVLEV-ASGRRP 580
G + + APE + + +DV+S+G V+ EV A G RP
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 170 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 216
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 217 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGK 275
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 276 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 170 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 216
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 217 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGK 275
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 276 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 373 RELRSATKCFNANRI-----IGHGAFGTVYKGIL--PQNGDI-IAVK--RCSHNSQGKDE 422
R RS T+ A+RI IG G G V G L P D+ +A+K + + + + +
Sbjct: 37 RAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 423 FLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKI 482
FLSE SI+G H N++RL+G ++V + M NGSLD L +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM 156
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
L GV + + YL + +HRD+ N+++D ++ DFGL+R +E D T
Sbjct: 157 LRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTG 213
Query: 543 GTMG--YLAPEYLLTGRATEKTDVFSYGAVVLEV-ASGRRP 580
G + + APE + + +DV+S+G V+ EV A G RP
Sbjct: 214 GKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +A+K + + FL E ++ LRH LV+L
Sbjct: 16 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 447 EKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
E+ I +V + M GSL D E L P + +AS +AY+ + +HRD
Sbjct: 74 EE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 129
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
++ +NI++ E ++ DFGLAR +E ++ A + + APE L GR T K+DV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 566 SYGAVVLEVAS-GRRP 580
S+G ++ E+ + GR P
Sbjct: 190 SFGILLTELTTKGRVP 205
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 4 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 50
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 51 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGK 109
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 110 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 166
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 22/212 (10%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE----FLSELSIIGTLRH 435
K F+ R IGHG+FG VY +N +++A+K+ S++ + +E + E+ + LRH
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 436 RNLVRLQGWCHEKGE---ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAY 492
N ++ +G C+ + +++ Y L GS L + PL + + G LAY
Sbjct: 114 PNTIQYRG-CYLREHTAWLVMEYCL---GSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 493 LHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEY 552
LH + +IHRDVK NI+L E +LGDFG A + +P A GT ++APE
Sbjct: 170 LHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM----AP-ANXFVGTPYWMAPEV 221
Query: 553 LLT---GRATEKTDVFSYGAVVLEVASGRRPI 581
+L G+ K DV+S G +E+A + P+
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 4 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 50
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 51 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGK 109
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 110 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 166
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 20/209 (9%)
Query: 386 RIIGHGAFGTVYKGILPQNGDII----AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
+++G GAFGTVYKGI G+ + A+K + + K EF+ E I+ ++ H +LV
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQ 495
RL G C I LV LMP+G L + + E + + S++LL +A + YL
Sbjct: 81 RLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNI----GSQLLLNWCVQIAKGMMYLE- 134
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLAPEYLL 554
E +++HRD+ N+++ + ++ DFGLAR +E D K +A + ++A E +
Sbjct: 135 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRPIE 582
+ T ++DV+SYG + E+ + G +P +
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMI 181
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 16/209 (7%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE----FLSELSIIGTLRH 435
K F+ R IGHG+FG VY +N +++A+K+ S++ + +E + E+ + LRH
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
N ++ +G C+ + + GS L + PL + + G LAYLH
Sbjct: 75 PNTIQYRG-CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 133
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
+ +IHRDVK NI+L E +LGDFG A + +P A GT ++APE +L
Sbjct: 134 ---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM----AP-ANXFVGTPYWMAPEVILA 185
Query: 556 ---GRATEKTDVFSYGAVVLEVASGRRPI 581
G+ K DV+S G +E+A + P+
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +A+K + + FL E ++ LRH LV+L
Sbjct: 19 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 447 EKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
E+ I +V + M GSL D E L P + +AS +AY+ + +HRD
Sbjct: 77 EE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 132
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
++ +NI++ E ++ DFGLAR +E ++ A + + APE L GR T K+DV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 566 SYGAVVLEVAS-GRRP 580
S+G ++ E+ + GR P
Sbjct: 193 SFGILLTELTTKGRVP 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPE-M 180
Query: 554 LTGRA-TEKTDVFSYGAVVLEVASGRRPIE 582
+ GR EK D++S G + E G+ P E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 113/207 (54%), Gaps = 20/207 (9%)
Query: 386 RIIGHGAFGTVYKGILPQNGDII----AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
+++G GAFGTVYKGI G+ + A+K + + K EF+ E I+ ++ H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQ 495
RL G C I LV LMP+G L + + E + + S++LL +A + YL
Sbjct: 104 RLLGVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNI----GSQLLLNWCVQIAKGMMYLE- 157
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLAPEYLL 554
E +++HRD+ N+++ + ++ DFGLAR +E D K +A + ++A E +
Sbjct: 158 --ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ T ++DV+SYG + E+ + G +P
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 4 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 50
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 51 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGK 109
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 110 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 166
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXI 183
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 123
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 124 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPE-M 176
Query: 554 LTGRA-TEKTDVFSYGAVVLEVASGRRPIE 582
+ GR EK D++S G + E G+ P E
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 128
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 129 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMI 182
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T +GT+ YL PE +
Sbjct: 126 HSK---RVIHRDIKPENLLLGSAGELKIADFGWSC---HAPSSRRTTLSGTLDYLPPEMI 179
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q I+A+K + G + + E+ I L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 121
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 122 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMI 175
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMI 183
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 170 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 216
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 217 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFLKGETGK 275
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 276 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 332
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMI 178
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +A+K + + FL E ++ LRH LV+L
Sbjct: 17 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 447 EKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
E+ I +V + M GSL D E L P + +AS +AY+ + +HRD
Sbjct: 75 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 130
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
++ +NI++ E ++ DFGLAR +E ++ A + + APE L GR T K+DV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 566 SYGAVVLEVAS-GRRP 580
S+G ++ E+ + GR P
Sbjct: 191 SFGILLTELTTKGRVP 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 9/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +A+K + + FL E ++ LRH LV+L
Sbjct: 15 LGQGCFGEVWMGTW--NGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 447 EKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
E+ I +V + M GSL D E L P + +AS +AY+ + +HRD
Sbjct: 73 EE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRD 128
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
++ +NI++ E ++ DFGLAR +E ++ A + + APE L GR T K+DV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 566 SYGAVVLEVAS-GRRP 580
S+G ++ E+ + GR P
Sbjct: 189 SFGILLTELTTKGRVP 204
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMI 178
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 1 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 47
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 48 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGK 106
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 107 YLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 163
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 164 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 1 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 47
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 48 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGK 106
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 107 YLRLPQLVDMSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 163
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 164 NEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 13/210 (6%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 141
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 142 HSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPE-M 194
Query: 554 LTGRA-TEKTDVFSYGAVVLEVASGRRPIE 582
+ GR EK D++S G + E G+ P E
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 253 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 299
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 300 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGK 358
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 359 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 415
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 150
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 151 HSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMI 204
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 4 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 50
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ +RH LV+L E+ I +V + M GSL D E
Sbjct: 51 KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGK 109
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 110 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 166
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 33/226 (14%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ R +G G FG+V Y + G+++AVK+ H+++
Sbjct: 5 RDPTQFEERHLKFL-------RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 57
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL + L
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL---------- 107
Query: 478 HRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ K + L Y Q C+ + IHRD+ T NI+++ ++GDFGL + +
Sbjct: 108 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 531 EHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 13/210 (6%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G + K L + S + + +A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYITELANALSYC 129
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPE-M 182
Query: 554 LTGRA-TEKTDVFSYGAVVLEVASGRRPIE 582
+ GR EK D++S G + E G+ P E
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMI 178
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 4 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 50
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M G L D E
Sbjct: 51 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGK 109
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 110 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 166
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 4 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 50
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 51 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGK 109
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD+ +NI++ E ++ DFGLAR +E
Sbjct: 110 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIED 166
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMI 178
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 129
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 130 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMI 183
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMI 178
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 4 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 50
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M G L D E
Sbjct: 51 KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGK 109
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGLAR +E
Sbjct: 110 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIED 166
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 167 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 126 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMI 179
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 355 KSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDI-IAVKRC 413
+++ D +P+E LR K +G G FG V+ G NG +A+K
Sbjct: 171 QTQGLAKDAWEIPRE----SLRLEVK-------LGQGCFGEVWMGTW--NGTTRVAIKTL 217
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
+ + FL E ++ LRH LV+L E+ I +V + M GSL D E
Sbjct: 218 KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGK 276
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
L P + +AS +AY+ + +HRD++ +NI++ E ++ DFGL R +E
Sbjct: 277 YLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIED 333
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE L GR T K+DV+S+G ++ E+ + GR P
Sbjct: 334 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ +FG + H S T GT+ YL PE +
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMI 181
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 13/210 (6%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPE-M 177
Query: 554 LTGRA-TEKTDVFSYGAVVLEVASGRRPIE 582
+ GR EK D++S G + E G+ P E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMI 181
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKR-CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
++G G FG K + G+++ +K + + + FL E+ ++ L H N+++ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
++ + + + + G+L + S PW R +AS +AYLH +IHRD
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRD 133
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKS----------PDAT---VAAGTMGYLAPEY 552
+ + N ++ E N + DFGLAR + +K+ PD G ++APE
Sbjct: 134 LNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE- 192
Query: 553 LLTGRA-TEKTDVFSYGAVVLEV 574
++ GR+ EK DVFS+G V+ E+
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEI 215
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 22/211 (10%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS-HNSQGK-------DEFLSELSIIGTLRHRNLV 439
IG G FG V+KG L ++ ++A+K +S+G+ EF E+ I+ L H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+L G H +V + +P G L L + P+ W + +++L +A + Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNP 143
Query: 500 QVIHRDVKTSNIM---LDEG--FNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
++HRD+++ NI LDE A++ DFGL++Q H + G ++APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH----SVSGLLGNFQWMAPETIG 199
Query: 555 TGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
TEK D +S+ ++ + +G P ++
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ +FG + H S T GT+ YL PE +
Sbjct: 127 HSK---RVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMI 180
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 25/236 (10%)
Query: 358 SFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAV 410
SF++ + +P E+ A + +R +G G+FG VY+G+ P+ I
Sbjct: 2 SFSAADVYVPDEWEV-----AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 56
Query: 411 KRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL--- 467
+ + + + EFL+E S++ ++VRL G + L++ +LM G L L
Sbjct: 57 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 116
Query: 468 ---FEARSPLPWPHRSKILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARL 521
E L P SK++ +A +AYL+ N+ +HRD+ N M+ E F ++
Sbjct: 117 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 173
Query: 522 GDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
GDFG+ R + E D + +++PE L G T +DV+S+G V+ E+A+
Sbjct: 174 GDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL + I
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFI 131
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ R +G G FG VY Q+ I+A+K K + E+ I LRH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y H +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCHSK- 131
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+VIHRD+K N++L ++ DFG + H S T GT+ YL PE +
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 558 ATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G P E
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 125
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 126 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMI 179
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 13/210 (6%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPE-M 180
Query: 554 LTGRA-TEKTDVFSYGAVVLEVASGRRPIE 582
+ GR EK D++S G + E G+ P E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 125 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMI 178
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 33/227 (14%)
Query: 364 IRMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQG 419
+R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 1 MRDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE 53
Query: 420 K-DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPW 476
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L
Sbjct: 54 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--------- 104
Query: 477 PHRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQ 529
+ K + L Y Q C+ + IHRD+ T NI+++ ++GDFGL +
Sbjct: 105 -QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV 163
Query: 530 VEHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
+ DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 164 LPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 126
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 127 HSK---RVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMI 180
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 7 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 59
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L
Sbjct: 60 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---------- 109
Query: 478 HRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ K + L Y Q C+ + IHRD+ T NI+++ ++GDFGL + +
Sbjct: 110 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
Query: 531 EHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 170 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 6 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 58
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L
Sbjct: 59 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---------- 108
Query: 478 HRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ K + L Y Q C+ + IHRD+ T NI+++ ++GDFGL + +
Sbjct: 109 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
Query: 531 EHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 169 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 1 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 53
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L
Sbjct: 54 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---------- 103
Query: 478 HRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ K + L Y Q C+ + IHRD+ T NI+++ ++GDFGL + +
Sbjct: 104 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 163
Query: 531 EHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 164 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 127
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + + D GT+ YL PE +
Sbjct: 128 HSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL---CGTLDYLPPEMI 181
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 99/198 (50%), Gaps = 13/198 (6%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQG-W 444
+ IG G FG V G G+ +AVK C N FL+E S++ LRH NLV+L G
Sbjct: 27 QTIGKGEFGDVMLG--DYRGNKVAVK-CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 445 CHEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
EKG + +V + M GSL D RS L K L V A+ YL N +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 140
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTD 563
RD+ N+++ E A++ DFGL ++ S + + APE L + + K+D
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 564 VFSYGAVVLEVAS-GRRP 580
V+S+G ++ E+ S GR P
Sbjct: 197 VWSFGILLWEIYSFGRVP 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 33 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 85
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L
Sbjct: 86 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---------- 135
Query: 478 HRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ K + L Y Q C+ + IHRD+ T NI+++ ++GDFGL + +
Sbjct: 136 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
Query: 531 EHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 196 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 8 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 60
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L
Sbjct: 61 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---------- 110
Query: 478 HRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ K + L Y Q C+ + IHRD+ T NI+++ ++GDFGL + +
Sbjct: 111 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
Query: 531 EHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 171 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 9 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 61
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L + + +
Sbjct: 62 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 121
Query: 478 HRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD 537
+ + + YL + + IHRD+ T NI+++ ++GDFGL + + DK
Sbjct: 122 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 178
Query: 538 ATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
G + + APE L + + +DV+S+G V+ E+
Sbjct: 179 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL + I
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFI 131
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 99/198 (50%), Gaps = 13/198 (6%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQG-W 444
+ IG G FG V G G+ +AVK C N FL+E S++ LRH NLV+L G
Sbjct: 12 QTIGKGEFGDVMLG--DYRGNKVAVK-CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 445 CHEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
EKG + +V + M GSL D RS L K L V A+ YL N +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 125
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTD 563
RD+ N+++ E A++ DFGL ++ S + + APE L + + K+D
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 564 VFSYGAVVLEVAS-GRRP 580
V+S+G ++ E+ S GR P
Sbjct: 182 VWSFGILLWEIYSFGRVP 199
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 19/219 (8%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 5 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 57
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L + + +
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 117
Query: 478 HRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD 537
+ + + YL + + IHRD+ T NI+++ ++GDFGL + + DK
Sbjct: 118 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 174
Query: 538 ATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
G + + APE L + + +DV+S+G V+ E+
Sbjct: 175 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 143/322 (44%), Gaps = 47/322 (14%)
Query: 357 ESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIA 409
E F++ + +P E+ A + +R +G G+FG VY+G+ P+ I
Sbjct: 29 EYFSAADVYVPDEWE-----VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 83
Query: 410 VKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL-- 467
+ + + + EFL+E S++ ++VRL G + L++ +LM G L L
Sbjct: 84 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 143
Query: 468 ----FEARSPLPWPHRSKILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNAR 520
E L P SK++ +A +AYL+ N+ +HRD+ N M+ E F +
Sbjct: 144 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 200
Query: 521 LGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GR 578
+GDFG+ R + E D + +++PE L G T +DV+S+G V+ E+A+
Sbjct: 201 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 260
Query: 579 RPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACS 638
+P + G+++ E V EG LL D + F+ M C
Sbjct: 261 QPYQ---------GLSN---EQVLRFVMEGGLLDKPDNCPDMLFELMRM---------CW 299
Query: 639 HPDPLARPTMRGVVQMLVGEAE 660
+P RP+ ++ + E E
Sbjct: 300 QYNPKMRPSFLEIISSIKEEME 321
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 114/236 (48%), Gaps = 25/236 (10%)
Query: 358 SFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAV 410
SF++ + +P E+ A + +R +G G+FG VY+G+ P+ I
Sbjct: 2 SFSAADVYVPDEWEV-----AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 56
Query: 411 KRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL--- 467
+ + + + EFL+E S++ ++VRL G + L++ +LM G L L
Sbjct: 57 VNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL 116
Query: 468 ---FEARSPLPWPHRSKILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARL 521
E L P SK++ +A +AYL+ N+ +HRD+ N M+ E F ++
Sbjct: 117 RPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 173
Query: 522 GDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
GDFG+ R + E D + +++PE L G T +DV+S+G V+ E+A+
Sbjct: 174 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 13/201 (6%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQG-W 444
+ IG G FG V G G+ +AVK C N FL+E S++ LRH NLV+L G
Sbjct: 199 QTIGKGEFGDVMLG--DYRGNKVAVK-CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 445 CHEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
EKG + +V + M GSL D RS L K L V A+ YL N +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 312
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTD 563
RD+ N+++ E A++ DFGL ++ S + + APE L + + K+D
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 564 VFSYGAVVLEVAS-GRRPIEK 583
V+S+G ++ E+ S GR P +
Sbjct: 369 VWSFGILLWEIYSFGRVPYPR 389
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL + I
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFI 133
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 374 ELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAVKRCSHNSQGKDEFLSE 426
E A + +R +G G+FG VY+G+ P+ I + + + + EFL+E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL------FEARSPLPWPHRS 480
S++ ++VRL G + L++ +LM G L L E L P S
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 481 KILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSP 536
K++ +A +AYL+ N+ +HRD+ N M+ E F ++GDFG+ R + E D
Sbjct: 124 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 537 DATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ +++PE L G T +DV+S+G V+ E+A+
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 357 ESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIA 409
E F++ + +P E+ A + +R +G G+FG VY+G+ P+ I
Sbjct: 7 EYFSAADVYVPDEWEV-----AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 410 VKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE 469
+ + + + EFL+E S++ ++VRL G + L++ +LM G L L
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 470 ARSP------LPWPHRSKILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNAR 520
R L P SK++ +A +AYL+ N+ +HRD+ N M+ E F +
Sbjct: 122 LRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 178
Query: 521 LGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+GDFG+ R + E D + +++PE L G T +DV+S+G V+ E+A+
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY Q+ I+A+K + G + + E+ I L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 150
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + + D GT+ YL PE +
Sbjct: 151 HSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL---CGTLDYLPPEMI 204
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL + I
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFI 133
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 114/237 (48%), Gaps = 25/237 (10%)
Query: 357 ESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIA 409
E F++ + +P E+ A + +R +G G+FG VY+G+ P+ I
Sbjct: 7 EYFSAADVYVPDEWEV-----AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIK 61
Query: 410 VKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL-- 467
+ + + + EFL+E S++ ++VRL G + L++ +LM G L L
Sbjct: 62 TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 121
Query: 468 ----FEARSPLPWPHRSKILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNAR 520
E L P SK++ +A +AYL+ N+ +HRD+ N M+ E F +
Sbjct: 122 LRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 178
Query: 521 LGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+GDFG+ R + E D + +++PE L G T +DV+S+G V+ E+A+
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKD----EFLSELSIIGTLRHRN 437
F+ R +G G FG VY QN I+A+K + K+ + E+ I LRH N
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALF------EARSPLPWPHRSKILLGVASALA 491
++R+ + H++ I L+ + P G L K L E RS + + +A AL
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS-------ATFMEELADALH 128
Query: 492 YLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPE 551
Y H E +VIHRD+K N+++ ++ DFG + H S GT+ YL PE
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPE 182
Query: 552 YLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
+ EK D++ G + E G P +
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 11/209 (5%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQG-KDEFLSELSIIGTL 433
A + F R +G G FG VY + I+A+K + G + + E+ I L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 434 RHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
RH N++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYITELANALSYC 124
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H + +VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 125 HSK---KVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMI 178
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G+ P E
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL + I
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFI 133
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL + I
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFI 138
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKD----EFLSELSIIGTLRHRN 437
F+ R +G G FG VY QN I+A+K + K+ + E+ I LRH N
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALF------EARSPLPWPHRSKILLGVASALA 491
++R+ + H++ I L+ + P G L K L E RS + + +A AL
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS-------ATFMEELADALH 129
Query: 492 YLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPE 551
Y H E +VIHRD+K N+++ ++ DFG + H S GT+ YL PE
Sbjct: 130 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPE 183
Query: 552 YLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
+ EK D++ G + E G P +
Sbjct: 184 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 19/217 (8%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK-D 421
P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 4 PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 422 EFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L + + +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
+ + + YL + + IHRD+ T NI+++ ++GDFGL + + DK
Sbjct: 117 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 540 VAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
G + + APE L + + +DV+S+G V+ E+
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 134
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 195 DVWAFGVLLWEIAT 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL + I
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFI 133
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 108/224 (48%), Gaps = 33/224 (14%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK-D 421
P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 2 PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 54
Query: 422 EFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L +
Sbjct: 55 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----------QK 104
Query: 480 SKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
K + L Y Q C+ + IHRD+ T NI+++ ++GDFGL + +
Sbjct: 105 HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 164
Query: 533 DKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 165 DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 133
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 194 DVWAFGVLLWEIAT 207
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS-HNSQGK-------DEFLSELSIIGTLRHRNLV 439
IG G FG V+KG L ++ ++A+K +S+G+ EF E+ I+ L H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+L G H +V + +P G L L + P+ W + +++L +A + Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNP 143
Query: 500 QVIHRDVKTSNIM---LDEG--FNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
++HRD+++ NI LDE A++ DFG ++Q H + G ++APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVH----SVSGLLGNFQWMAPETIG 199
Query: 555 TGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
TEK D +S+ ++ + +G P ++
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 137
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 198 DVWAFGVLLWEIAT 211
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
+ +V + MP G+L L E R + + ++SA+ YL ++ IHRD+
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK---NFIHRDL 156
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
N ++ E ++ DFGL+R + D A + + APE L + K+DV++
Sbjct: 157 AARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWA 216
Query: 567 YGAVVLEVAS 576
+G ++ E+A+
Sbjct: 217 FGVLLWEIAT 226
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 146
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 207 DVWAFGVLLWEIAT 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL + I
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEK---KNFI 131
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 192 DVWAFGVLLWEIAT 205
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 374 ELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAVKRCSHNSQGKDEFLSE 426
E A + +R +G G+FG VY+G+ P+ I + + + + EFL+E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL------FEARSPLPWPHRS 480
S++ ++VRL G + L++ +LM G L L E L P S
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 481 KILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSP 536
K++ +A +AYL+ N+ +HRD+ N M+ E F ++GDFG+ R + E D
Sbjct: 130 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 186
Query: 537 DATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ +++PE L G T +DV+S+G V+ E+A+
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 374 ELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAVKRCSHNSQGKDEFLSE 426
E A + +R +G G+FG VY+G+ P+ I + + + + EFL+E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL------FEARSPLPWPHRS 480
S++ ++VRL G + L++ +LM G L L E L P S
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 481 KILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSP 536
K++ +A +AYL+ N+ +HRD+ N M+ E F ++GDFG+ R + E D
Sbjct: 132 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 537 DATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ +++PE L G T +DV+S+G V+ E+A+
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 99/201 (49%), Gaps = 13/201 (6%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQG-W 444
+ IG G FG V G G+ +AVK C N FL+E S++ LRH NLV+L G
Sbjct: 18 QTIGKGEFGDVMLG--DYRGNKVAVK-CIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 445 CHEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
EKG + +V + M GSL D RS L K L V A+ YL N +H
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 131
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTD 563
RD+ N+++ E A++ DFGL ++ S + + APE L + K+D
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 564 VFSYGAVVLEVAS-GRRPIEK 583
V+S+G ++ E+ S GR P +
Sbjct: 188 VWSFGILLWEIYSFGRVPYPR 208
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS-HNSQGK-------DEFLSELSIIGTLRHRNLV 439
IG G FG V+KG L ++ ++A+K +S+G+ EF E+ I+ L H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+L G H +V + +P G L L + P+ W + +++L +A + Y+ Q
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QNQNP 143
Query: 500 QVIHRDVKTSNIM---LDEG--FNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
++HRD+++ NI LDE A++ DF L++Q H + G ++APE +
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVH----SVSGLLGNFQWMAPETIG 199
Query: 555 TGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
TEK D +S+ ++ + +G P ++
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDE 230
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 374 ELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAVKRCSHNSQGKDEFLSE 426
E A + +R +G G+FG VY+G+ P+ I + + + + EFL+E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL------FEARSPLPWPHRS 480
S++ ++VRL G + L++ +LM G L L E L P S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 481 KILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSP 536
K++ +A +AYL+ N+ +HRD+ N M+ E F ++GDFG+ R + E D
Sbjct: 126 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 537 DATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ +++PE L G T +DV+S+G V+ E+A+
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 196 DVWAFGVLLWEIAT 209
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKD----EFLSELSIIGTLRHRN 437
F+ R +G G FG VY QN I+A+K + K+ + E+ I LRH N
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALF------EARSPLPWPHRSKILLGVASALA 491
++R+ + H++ I L+ + P G L K L E RS + + +A AL
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS-------ATFMEELADALH 128
Query: 492 YLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPE 551
Y H E +VIHRD+K N+++ ++ DFG + H S GT+ YL PE
Sbjct: 129 YCH---ERKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPE 182
Query: 552 YLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
+ EK D++ G + E G P +
Sbjct: 183 MIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 126/306 (41%), Gaps = 53/306 (17%)
Query: 375 LRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLR 434
LR A+ F ++G GAFG V K + A+K+ H + LSE+ ++ +L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 435 H-------------RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSK 481
H RN V+ +K + + + NG+L + +
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 482 ILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-------- 533
+ + AL+Y+H + +IHRD+K NI +DE N ++GDFGLA+ V
Sbjct: 121 LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 534 -----KSPDATVAAGTMGYLAPEYLL-TGRATEKTDVFSYGAVVLEVASGRRPIEKEITG 587
S + T A GT Y+A E L TG EK D++S G + E+ I TG
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM------IYPFSTG 231
Query: 588 VGKVGVASNLVEWVWSLHREGRLLTAADARLEGQFDEAEMR-RVLLVGLACSHPDPLARP 646
+ +V + L + FD+ +M+ ++ L H DP RP
Sbjct: 232 MERVNILKK--------------LRSVSIEFPPDFDDNKMKVEKKIIRLLIDH-DPNKRP 276
Query: 647 TMRGVV 652
R ++
Sbjct: 277 GARTLL 282
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 374 ELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAVKRCSHNSQGKDEFLSE 426
E A + +R +G G+FG VY+G+ P+ I + + + + EFL+E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL------FEARSPLPWPHRS 480
S++ ++VRL G + L++ +LM G L L E L P S
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 481 KILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSP 536
K++ +A +AYL+ N+ +HRD+ N M+ E F ++GDFG+ R + E D
Sbjct: 132 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 537 DATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ +++PE L G T +DV+S+G V+ E+A+
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ R +G G FG VY Q+ I+A+K K + E+ I LRH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
++RL G+ H+ + L+ + P G++ + L + S + + +A+AL+Y H +
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYITELANALSYCHSK- 131
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 132 --RVIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRM 186
Query: 558 ATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++S G + E G P E
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILLGVA----SALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL +A SA+ YL ++ I
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 138
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD+ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 199 DVWAFGVLLWEIAT 212
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 100/195 (51%), Gaps = 7/195 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V+ ++ + AVK S + FL+E +++ TL+H LV+L
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 448 KGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
K I ++ + M GSL D + S P P +A +A++ Q IHRD+
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDL 137
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
+ +NI++ ++ DFGLAR +E ++ A + + APE + G T K+DV+S
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 197
Query: 567 YGAVVLEVAS-GRRP 580
+G +++E+ + GR P
Sbjct: 198 FGILLMEIVTYGRIP 212
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 374 ELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAVKRCSHNSQGKDEFLSE 426
E A + +R +G G+FG VY+G+ P+ I + + + + EFL+E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP------LPWPHRS 480
S++ ++VRL G + L++ +LM G L L R L P S
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 481 KILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSP 536
K++ +A +AYL+ N+ +HRD+ N M+ E F ++GDFG+ R + E D
Sbjct: 129 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 185
Query: 537 DATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ +++PE L G T +DV+S+G V+ E+A+
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 22 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 80 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 132
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 193 DVWSFGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 21 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSP----LPWPHRSKILLGVASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P L + +A +A++ E I
Sbjct: 79 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 23 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 81 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 133
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 194 DVWSFGILLTEIVTHGRIP 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 5 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 57
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L
Sbjct: 58 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--------QA 109
Query: 478 HRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
H +I L Y Q C+ + IHRD+ T NI+++ ++GDFGL + +
Sbjct: 110 HAERI--DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
Query: 531 EHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 168 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 18/221 (8%)
Query: 373 RELRSATKCFNANRI------IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK-DEFLS 425
RE + + N + +G GAFG VYK + G + A K S+ + ++++
Sbjct: 6 REYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV 65
Query: 426 ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG 485
E+ I+ T H +V+L G + G++ ++ + P G++D + E L P +
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGL-ARQVEHDKSPDATVAAGT 544
+ AL +LH ++IHRD+K N+++ + RL DFG+ A+ ++ + D+ + GT
Sbjct: 126 MLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GT 180
Query: 545 MGYLAPEYLLTGRATE-----KTDVFSYGAVVLEVASGRRP 580
++APE ++ + K D++S G ++E+A P
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 16 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 74 QE-PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 126
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 187 DVWSFGILLTEIVTHGRIP 205
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 388 IGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK-DEFLSELSIIGTLRHRNLVRLQ 442
+G G FG+V Y + G+++AVK+ H+++ +F E+ I+ +L+H N+V+ +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 443 GWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
G C+ G + L+ + +P GSL L + + + + + + YL + +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 152
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGRA 558
IHRD+ T NI+++ ++GDFGL + + DK G + + APE L +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 559 TEKTDVFSYGAVVLEV 574
+ +DV+S+G V+ E+
Sbjct: 213 SVASDVWSFGVVLYEL 228
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 18/229 (7%)
Query: 354 KKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRC 413
K + + D +P+E + +G G FG V+ ++ + AVK
Sbjct: 173 KPQKPWEKDAWEIPRE-----------SLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTM 220
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARS 472
S + FL+E +++ TL+H LV+L K I ++ + M GSL D + S
Sbjct: 221 KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGS 279
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
P P +A +A++ Q IHRD++ +NI++ ++ DFGLAR +E
Sbjct: 280 KQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIED 336
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
++ A + + APE + G T K+DV+S+G +++E+ + GR P
Sbjct: 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 21 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 79 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 26 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSP----LPWPHRSKILLGVASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P L + +A +A++ E I
Sbjct: 84 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 136
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 197 DVWSFGILLTEIVTHGRIP 215
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 29 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 86
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSP----LPWPHRSKILLGVASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P L + +A +A++ E I
Sbjct: 87 QE-PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 139
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 200 DVWSFGILLTEIVTHGRIP 218
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 27 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSP----LPWPHRSKILLGVASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P L + +A +A++ E I
Sbjct: 85 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 137
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 198 DVWSFGILLTEIVTHGRIP 216
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 30 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSP----LPWPHRSKILLGVASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P L + +A +A++ E I
Sbjct: 88 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 140
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 201 DVWSFGILLTEIVTHGRIP 219
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 102/196 (52%), Gaps = 12/196 (6%)
Query: 388 IGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK-DEFLSELSIIGTLRHRNLVRLQ 442
+G G FG+V Y + G+++AVK+ H+++ +F E+ I+ +L+H N+V+ +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 443 GWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
G C+ G + L+ + +P GSL L + + + + + + YL + +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---R 152
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGRA 558
IHRD+ T NI+++ ++GDFGL + + DK G + + APE L +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 559 TEKTDVFSYGAVVLEV 574
+ +DV+S+G V+ E+
Sbjct: 213 SVASDVWSFGVVLYEL 228
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 12/200 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK-DEFLSELSIIGTLRHRNLVRLQGWCH 446
+G GAFG VYK + G + A K S+ + ++++ E+ I+ T H +V+L G +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
G++ ++ + P G++D + E L P + + AL +LH ++IHRD+
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDL 135
Query: 507 KTSNIMLDEGFNARLGDFGL-ARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE----- 560
K N+++ + RL DFG+ A+ ++ + D+ + GT ++APE ++ +
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI--GTPYWMAPEVVMCETMKDTPYDY 193
Query: 561 KTDVFSYGAVVLEVASGRRP 580
K D++S G ++E+A P
Sbjct: 194 KADIWSLGITLIEMAQIEPP 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 21 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 79 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 27 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 85 QEP-IYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 137
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 198 DVWSFGILLTEIVTHGRIP 216
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 112/213 (52%), Gaps = 19/213 (8%)
Query: 377 SATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ--GKDEFLSELSIIGTLR 434
S++ F +G+G + TVYKG+ G +A+K +S+ + E+S++ L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL------GVAS 488
H N+VRL H + ++ LV++ M N K ++R+ P ++ L +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDL--KKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 489 ALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG--TMG 546
LA+ H EN+++HRD+K N+++++ +LGDFGLAR P T ++ T+
Sbjct: 120 GLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF---GIPVNTFSSEVVTLW 173
Query: 547 YLAPEYLLTGRA-TEKTDVFSYGAVVLEVASGR 578
Y AP+ L+ R + D++S G ++ E+ +G+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 19/217 (8%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK-D 421
P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 4 PTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 422 EFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L + + +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
+ + + YL + + IHRD+ T NI+++ ++GDFGL + + DK
Sbjct: 117 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
Query: 540 VAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
G + + APE L + + +DV+S+G V+ E+
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK----RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ R++G G+FG V G AVK R K+ L E+ ++ L H N
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+++L + +KG LV ++ G L + +R ++I+ V S + Y+H+
Sbjct: 88 IMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMHK-- 144
Query: 498 ENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
N+++HRD+K N++L+ + N R+ DFGL+ E K + GT Y+APE +L
Sbjct: 145 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE-VL 200
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRP 580
G EK DV+S G ++ + SG P
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPP 226
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 31 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 89 QE-PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 141
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 202 DVWSFGILLTEIVTHGRIP 220
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 26/266 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V G D+ AVK S +DEF E + L H LV+ G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ I +V + + NG L L L ++ V +A+L +Q IHRD+
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLA 131
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSY 567
N ++D ++ DFG+ R V D+ + + + APE + + K+DV+++
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAF 191
Query: 568 GAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADARLEGQFDEAE 626
G ++ EV S G+ P + + S +V V HR R A+D
Sbjct: 192 GILMWEVFSLGKMPYD--------LYTNSEVVLKVSQGHRLYRPHLASDT---------- 233
Query: 627 MRRVLLVGLACSHPDPLARPTMRGVV 652
+ + +C H P RPT + ++
Sbjct: 234 ---IYQIMYSCWHELPEKRPTFQQLL 256
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK----RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ R++G G+FG V G AVK R K+ L E+ ++ L H N
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 93
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+++L + +KG LV ++ G L + +R ++I+ V S + Y+H+
Sbjct: 94 IMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMHK-- 150
Query: 498 ENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
N+++HRD+K N++L+ + N R+ DFGL+ E K + GT Y+APE +L
Sbjct: 151 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE-VL 206
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRP 580
G EK DV+S G ++ + SG P
Sbjct: 207 HGTYDEKCDVWSTGVILYILLSGCPP 232
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHN--SQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
IG G FG V+ G L + ++AVK C K +FL E I+ H N+VRL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGV----ASALAYLHQECENQV 501
+K I +V +L+ G L + L R K LL + A+ + YL +C
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARL----RVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 502 IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG------TMGYLAPEYLLT 555
IHRD+ N ++ E ++ DFG++R+ D AA + + APE L
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSRE-----EADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 556 GRATEKTDVFSYGAVVLEVAS 576
GR + ++DV+S+G ++ E S
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 109/226 (48%), Gaps = 33/226 (14%)
Query: 365 RMPKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGK 420
R P +F R L+ + +G G FG+V Y + G+++AVK+ H+++
Sbjct: 3 RDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 55
Query: 421 -DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWP 477
+F E+ I+ +L+H N+V+ +G C+ G + L+ + +P GSL L
Sbjct: 56 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---------- 105
Query: 478 HRSKILLGVASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ K + L Y Q C+ + IHR++ T NI+++ ++GDFGL + +
Sbjct: 106 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVL 165
Query: 531 EHDKSPDATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
DK G + + APE L + + +DV+S+G V+ E+
Sbjct: 166 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 97/201 (48%), Gaps = 24/201 (11%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHN--SQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
IG G FG V+ G L + ++AVK C K +FL E I+ H N+VRL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGV----ASALAYLHQECENQV 501
+K I +V +L+ G L + L R K LL + A+ + YL +C
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARL----RVKTLLQMVGDAAAGMEYLESKC---C 234
Query: 502 IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG------TMGYLAPEYLLT 555
IHRD+ N ++ E ++ DFG++R+ D AA + + APE L
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSRE-----EADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 556 GRATEKTDVFSYGAVVLEVAS 576
GR + ++DV+S+G ++ E S
Sbjct: 290 GRYSSESDVWSFGILLWETFS 310
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II L H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 96
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 156 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 131/315 (41%), Gaps = 71/315 (22%)
Query: 375 LRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLR 434
LR A+ F ++G GAFG V K + A+K+ H + LSE+ ++ +L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN 60
Query: 435 HRNLVRL-QGWCHEKG---------------------EILLVYDLMPNGSLDKALFEARS 472
H+ +VR W + E +YDL+ + +L++ E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEY-- 118
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
W ++ + AL+Y+H + +IHRD+K NI +DE N ++GDFGLA+ V
Sbjct: 119 ---W----RLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHR 168
Query: 533 D-------------KSPDATVAAGTMGYLAPEYLL-TGRATEKTDVFSYGAVVLEVASGR 578
S + T A GT Y+A E L TG EK D++S G + E+
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---- 224
Query: 579 RPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADARLEGQFDEAEMR-RVLLVGLAC 637
I TG+ +V + L + FD+ +M+ ++ L
Sbjct: 225 --IYPFSTGMERVNILKK--------------LRSVSIEFPPDFDDNKMKVEKKIIRLLI 268
Query: 638 SHPDPLARPTMRGVV 652
H DP RP R ++
Sbjct: 269 DH-DPNKRPGARTLL 282
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK----RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ R++G G+FG V G AVK R K+ L E+ ++ L H N
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+++L + +KG LV ++ G L + +R ++I+ V S + Y+H+
Sbjct: 111 IMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMHK-- 167
Query: 498 ENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
N+++HRD+K N++L+ + N R+ DFGL+ E K + GT Y+APE +L
Sbjct: 168 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE-VL 223
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRPI 581
G EK DV+S G ++ + SG P
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSGCPPF 250
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 98/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II L H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNI 110
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 170 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK----RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ R++G G+FG V G AVK R K+ L E+ ++ L H N
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+++L + +KG LV ++ G L + +R ++I+ V S + Y+H+
Sbjct: 112 IMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMHK-- 168
Query: 498 ENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
N+++HRD+K N++L+ + N R+ DFGL+ E K + GT Y+APE +L
Sbjct: 169 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE-VL 224
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRPI 581
G EK DV+S G ++ + SG P
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSGCPPF 251
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E S ++L ++SA+ YL ++ I
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFI 340
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HR++ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 401 DVWAFGVLLWEIAT 414
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G FG V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 17 LGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 75 QE-PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 127
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HR+++ +NI++ + + ++ DFGLAR +E ++ A + + APE + G T K+
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 188 DVWSFGILLTEIVTHGRIP 206
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSH--NSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G FG V + I G+ +A+K+C + + ++ + E+ I+ L H N+V +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 446 HEKGEI------LLVYDLMPNGSLDKAL--FEARSPLPWPHRSKILLGVASALAYLHQEC 497
++ LL + G L K L FE L +L ++SAL YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH--- 138
Query: 498 ENQVIHRDVKTSNIMLDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
EN++IHRD+K NI+L G ++ D G A+++ D+ T GT+ YLAPE L
Sbjct: 139 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLE 196
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRPI---EKEITGVGKVGVASN 596
+ T D +S+G + E +G RP + + GKV SN
Sbjct: 197 QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSN 241
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 21/225 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSH--NSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G FG V + I G+ +A+K+C + + ++ + E+ I+ L H N+V +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 446 HEKGEI------LLVYDLMPNGSLDKAL--FEARSPLPWPHRSKILLGVASALAYLHQEC 497
++ LL + G L K L FE L +L ++SAL YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH--- 139
Query: 498 ENQVIHRDVKTSNIMLDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
EN++IHRD+K NI+L G ++ D G A+++ D+ T GT+ YLAPE L
Sbjct: 140 ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPELLE 197
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRPI---EKEITGVGKVGVASN 596
+ T D +S+G + E +G RP + + GKV SN
Sbjct: 198 QKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSN 242
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 98/195 (50%), Gaps = 6/195 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G FG V+ G N +AVK + FL E +++ TL+H LVRL
Sbjct: 21 LGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 448 KGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
+ I ++ + M GSL D + + P +A +AY+ ++ IHRD+
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDL 136
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
+ +N+++ E ++ DFGLAR +E ++ A + + APE + G T K+DV+S
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 567 YGAVVLEVAS-GRRP 580
+G ++ E+ + G+ P
Sbjct: 197 FGILLYEIVTYGKIP 211
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 374 ELRSATKCFNANRIIGHGAFGTVYKGIL-------PQNGDIIAVKRCSHNSQGKDEFLSE 426
E A + +R +G G+FG VY+G+ P+ I + + + + EFL+E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKAL------FEARSPLPWPHRS 480
S++ ++VRL G + L++ +LM G L L E L P S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 481 KILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSP 536
K++ +A +AYL+ N+ +HRD+ N + E F ++GDFG+ R + E D
Sbjct: 126 KMIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 537 DATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ +++PE L G T +DV+S+G V+ E+A+
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILL----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL ++SA+ YL ++ I
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 337
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HR++ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 398 DVWAFGVLLWEIAT 411
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + +L
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFL 147
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E D + T A + ++A
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 253
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 254 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 286
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 102/194 (52%), Gaps = 12/194 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
+G G +G VY+G+ + +AVK ++ +EFL E +++ ++H NLV+L G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 448 KGEILLVYDLMPNGSLDKALFEA-RSPLPWPHRSKILL----GVASALAYLHQECENQVI 502
+ ++ + M G+L L E R + + +LL ++SA+ YL ++ I
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEV----NAVVLLYMATQISSAMEYLEKK---NFI 379
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HR++ N ++ E ++ DFGL+R + D A + + APE L + + K+
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 563 DVFSYGAVVLEVAS 576
DV+++G ++ E+A+
Sbjct: 440 DVWAFGVLLWEIAT 453
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFL 149
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E D + T A + ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 255
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 256 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 288
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 156 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 420 KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+++ E+SI +L H+++V G+ + + +V +L SL + L + R L P
Sbjct: 61 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 119
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
L + YLH+ N+VIHRD+K N+ L+E ++GDFGLA +VE+D T
Sbjct: 120 RYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 176
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
+ GT Y+APE L + + DV+S G ++ + G+ P E
Sbjct: 177 L-CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 110
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 111 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 170 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 96 VRCIGVSLQSLPRFILMELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 155 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 102
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 103 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 162 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFL 150
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E D + T A + ++A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 256
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 257 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 289
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 6/197 (3%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+ +G G FG V+ G N +AVK + FL E +++ TL+H LVRL
Sbjct: 18 KKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 446 HEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
++ I ++ + M GSL D + + P +A +AY+ ++ IHR
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHR 133
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDV 564
D++ +N+++ E ++ DFGLAR +E ++ A + + APE + G T K++V
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNV 193
Query: 565 FSYGAVVLEVAS-GRRP 580
+S+G ++ E+ + G+ P
Sbjct: 194 WSFGILLYEIVTYGKIP 210
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 95
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 96 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 155 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 420 KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+++ E+SI +L H+++V G+ + + +V +L SL + L + R L P
Sbjct: 61 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 119
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
L + YLH+ N+VIHRD+K N+ L+E ++GDFGLA +VE+D T
Sbjct: 120 RYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 176
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
+ GT Y+APE L + + DV+S G ++ + G+ P E
Sbjct: 177 L-CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + +L
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFL 149
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E D + T A + ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 255
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 256 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 288
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 112
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 113 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 172 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + +L
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFL 154
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E D + T A + ++A
Sbjct: 155 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 260
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 261 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 293
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 420 KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+++ E+SI +L H+++V G+ + + +V +L SL + L + R L P
Sbjct: 59 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 117
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
L + YLH+ N+VIHRD+K N+ L+E ++GDFGLA +VE+D
Sbjct: 118 RYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKK 173
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
V GT Y+APE L + + DV+S G ++ + G+ P E
Sbjct: 174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + +L
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFL 150
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E D + T A + ++A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 256
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 257 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 289
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 87
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 88 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 147 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 5/163 (3%)
Query: 420 KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+++ E+SI +L H+++V G+ + + +V +L SL + L + R L P
Sbjct: 65 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 123
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
L + YLH+ N+VIHRD+K N+ L+E ++GDFGLA +VE+D T
Sbjct: 124 RYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT 180
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
+ GT Y+APE L + + DV+S G ++ + G+ P E
Sbjct: 181 L-CGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + +L
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFL 208
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E D + T A + ++A
Sbjct: 209 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 314
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 315 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 347
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 14/207 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK----RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ R++G G+FG V G AVK R K+ L E+ ++ L H N
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+ +L + +KG LV ++ G L + +R ++I+ V S + Y H+
Sbjct: 88 IXKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYXHK-- 144
Query: 498 ENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
N+++HRD+K N++L+ + N R+ DFGL+ E K + GT Y+APE +L
Sbjct: 145 -NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI--GTAYYIAPE-VL 200
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRPI 581
G EK DV+S G ++ + SG P
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 136
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 137 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 196 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 168
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 169 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 274
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 275 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 307
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 122
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 123 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 182 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 238
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 239 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 420 KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+++ + EL ++ +V G + GEI + + M GSLD+ L EA+ +P
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR-IPEEIL 116
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
K+ + V LAYL ++ +Q++HRDVK SNI+++ +L DFG++ Q+ A
Sbjct: 117 GKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---AN 171
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
GT Y+APE L + ++D++S G ++E+A GR PI
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 167
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 168 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 273
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 274 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 306
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 149
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 255
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 256 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 288
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 113
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 114 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 173 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 420 KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+++ E+SI +L H+++V G+ + + +V +L SL + L + R L P
Sbjct: 83 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 141
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
L + YLH+ N+VIHRD+K N+ L+E ++GDFGLA +VE+D
Sbjct: 142 RYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKK 197
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
V GT Y+APE L + + DV+S G ++ + G+ P E
Sbjct: 198 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTLRHRN---LVRLQ 442
IG GA+G+V K + +G I+AVKR K++ L +L ++ +R + +V+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV--MRSSDCPYIVQFY 87
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPL----PWPHRSKILLGVASALAYLHQECE 498
G +G+ + +LM + S DK S L P KI L AL +L +
Sbjct: 88 GALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL- 145
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
++IHRD+K SNI+LD N +L DFG++ Q+ S T AG Y+APE + +
Sbjct: 146 -KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD--SIAKTRDAGCRPYMAPERIDPSAS 202
Query: 559 TE----KTDVFSYGAVVLEVASGRRPIEK 583
+ ++DV+S G + E+A+GR P K
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPK 231
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 148
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 254
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 255 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 287
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 149
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 255
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 256 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 288
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 420 KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+++ E+SI +L H+++V G+ + + +V +L SL + L + R L P
Sbjct: 85 REKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEA 143
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
L + YLH+ N+VIHRD+K N+ L+E ++GDFGLA +VE+D
Sbjct: 144 RYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKK 199
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
V GT Y+APE L + + DV+S G ++ + G+ P E
Sbjct: 200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 146
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 147 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 252
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 253 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 285
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 147
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 253
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 254 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 286
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNI 110
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 111 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+AR + A + +
Sbjct: 170 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 141
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 142 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 247
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 248 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 280
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 42/282 (14%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 144
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYLAP 550
+ +HRD+ N MLDE F ++ DFGLAR + E+ + T A + ++A
Sbjct: 145 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRL 610
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGRR 250
Query: 611 LTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 251 L------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 283
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 94/197 (47%), Gaps = 8/197 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G+FGTVYKG + + +K + F +E++++ RH N++ G+
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-T 102
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
K + +V SL K L + I A + YLH + +IHRD+K
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMK 159
Query: 508 TSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATE---KTD 563
++NI L EG ++GDFGLA + S G++ ++APE + ++D
Sbjct: 160 SNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSD 219
Query: 564 VFSYGAVVLEVASGRRP 580
V+SYG V+ E+ +G P
Sbjct: 220 VYSYGIVLYELMTGELP 236
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 383 NANRII-GHGAFGTVYKGILPQNGDIIAVKRC-SHNSQGKDEFLSELSIIGTLRHRNLVR 440
N +R++ G G +G VY G N IA+K +S+ E+++ L+H+N+V+
Sbjct: 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS------KILLGVASALAYLH 494
G E G I + + +P GSL L PL ++ +IL G L YLH
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLH 139
Query: 495 QECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
+NQ++HRD+K N++++ ++ DFG ++++ +P GT+ Y+APE +
Sbjct: 140 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEII 195
Query: 554 LTG-RATEK-TDVFSYGAVVLEVASGRRPI 581
G R K D++S G ++E+A+G+ P
Sbjct: 196 DKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGD----IIAVKRCSHNSQGK--DEFLSELSIIGTLRHRNLV 439
+++G GAFGTVYKGI +G+ +A+K N+ K E L E ++ + +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
RL G C + LV LMP G L + E R L + +A ++YL +
Sbjct: 83 RLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSP-DATVAAGTMGYLAPEYLLTGRA 558
+++HRD+ N+++ + ++ DFGLAR ++ D++ A + ++A E +L R
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRF 198
Query: 559 TEKTDVFSYGAVVLEVAS-GRRPIE 582
T ++DV+SYG V E+ + G +P +
Sbjct: 199 THQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 131/283 (46%), Gaps = 44/283 (15%)
Query: 385 NRIIGHGAFGTVYKGILPQN-GDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
N +IG G FG VY G L N G I AVK + + + +FL+E I+ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 440 RLQGWC-HEKGEILLVYDLMPNGSLDKALF-EARSPLPWPHRSKILLG----VASALAYL 493
L G C +G L+V M +G L + E +P K L+G VA + YL
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYL 148
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSP----DATVAAGTMGYLA 549
+ +HRD+ N MLDE F ++ DFGLAR + +DK + T A + ++A
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEXXSVHNKTGAKLPVKWMA 204
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGR 609
E L T + T K+DV+S+G ++ E+ + P + V + L+ +GR
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL--------QGR 253
Query: 610 LLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVV 652
L L+ ++ + V+ L C HP RP+ +V
Sbjct: 254 RL------LQPEYCPDPLYEVM---LKCWHPKAEMRPSFSELV 287
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 19/210 (9%)
Query: 383 NANRII-GHGAFGTVYKGILPQNGDIIAVKRC-SHNSQGKDEFLSELSIIGTLRHRNLVR 440
N +R++ G G +G VY G N IA+K +S+ E+++ L+H+N+V+
Sbjct: 10 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS------KILLGVASALAYLH 494
G E G I + + +P GSL L PL ++ +IL G L YLH
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG----LKYLH 125
Query: 495 QECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
+NQ++HRD+K N++++ ++ DFG ++++ +P GT+ Y+APE +
Sbjct: 126 ---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEII 181
Query: 554 LTG-RATEK-TDVFSYGAVVLEVASGRRPI 581
G R K D++S G ++E+A+G+ P
Sbjct: 182 DKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK-DEFLSELSIIGTLRHRNLVRLQGWCH 446
+G GAFG VYK + + A K S+ + ++++ E+ I+ + H N+V+L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
+ + ++ + G++D + E PL + AL YLH +N++IHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 507 KTSNIMLDEGFNARLGDFGL-ARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE----- 560
K NI+ + +L DFG+ A+ + D+ + GT ++APE ++ + +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI--GTPYWMAPEVVMCETSKDRPYDY 219
Query: 561 KTDVFSYGAVVLEVASGRRP 580
K DV+S G ++E+A P
Sbjct: 220 KADVWSLGITLIEMAEIEPP 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 103/235 (43%), Gaps = 49/235 (20%)
Query: 375 LRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLR 434
LR A+ F ++G GAFG V K + A+K+ H + LSE+ ++ +L
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLN 60
Query: 435 HRNLVRL-QGWCHEKG---------------------EILLVYDLMPNGSLDKALFEARS 472
H+ +VR W + E +YDL+ + +L++ E
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEY-- 118
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
W ++ + AL+Y+H + +IHR++K NI +DE N ++GDFGLA+ V
Sbjct: 119 ---W----RLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHR 168
Query: 533 D-------------KSPDATVAAGTMGYLAPEYLL-TGRATEKTDVFSYGAVVLE 573
S + T A GT Y+A E L TG EK D +S G + E
Sbjct: 169 SLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 12/200 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK-DEFLSELSIIGTLRHRNLVRLQGWCH 446
+G GAFG VYK + + A K S+ + ++++ E+ I+ + H N+V+L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
+ + ++ + G++D + E PL + AL YLH +N++IHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 507 KTSNIMLDEGFNARLGDFGL-ARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE----- 560
K NI+ + +L DFG+ A+ + D+ + GT ++APE ++ + +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI--GTPYWMAPEVVMCETSKDRPYDY 219
Query: 561 KTDVFSYGAVVLEVASGRRP 580
K DV+S G ++E+A P
Sbjct: 220 KADVWSLGITLIEMAEIEPP 239
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 142/324 (43%), Gaps = 47/324 (14%)
Query: 345 FFSKRYKHVKKSESF---TSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGIL 401
+F ++ + SF S+ ++ P R + F +GHG++G V+K
Sbjct: 19 YFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRS 78
Query: 402 PQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL----RHRNLVRL-QGWCHEKGEILLVYD 456
++G + AVKR +G + +L+ +G+ +H VRL Q W E+G IL +
Sbjct: 79 KEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW--EEGGILYLQT 136
Query: 457 LMPNGSLDKALFEARSPLP----WPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIM 512
+ SL + + LP W + LL ALA+LH + ++H DVK +NI
Sbjct: 137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL----ALAHLHSQG---LVHLDVKPANIF 189
Query: 513 LDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVL 572
L +LGDFGL VE + V G Y+APE LL G DVFS G +L
Sbjct: 190 LGPRGRCKLGDFGLL--VELGTAGAGEVQEGDPRYMAPE-LLQGSYGTAADVFSLGLTIL 246
Query: 573 EVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADARLEGQFDEAEMRRVLL 632
EVA +E G G W R+G L A L +E+R VL+
Sbjct: 247 EVACN---MELPHGGEG------------WQQLRQGYLPPEFTAGL-----SSELRSVLV 286
Query: 633 VGLACSHPDPLARPTMRGVVQMLV 656
+ L PDP R T ++ + V
Sbjct: 287 MML---EPDPKLRATAEALLALPV 307
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 37/221 (16%)
Query: 388 IGHGAFGTVY----KGILP-QNGDIIAVKRCSHNSQ-GKDEFLSELSIIGTLRHRNLVRL 441
+G GAFG V+ +LP Q+ ++AVK S+ + +F E ++ L+H+++VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL----------LGVASALA 491
G C E +L+V++ M +G L++ L RS P +K+L LG+ LA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFL---RSHGP---DAKLLAGGEDVAPGPLGLGQLLA 133
Query: 492 YLHQECENQV-------IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG- 543
Q V +HRD+ T N ++ +G ++GDFG++R + S D G
Sbjct: 134 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI---YSTDYYRVGGR 190
Query: 544 ---TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ ++ PE +L + T ++DV+S+G V+ E+ + G++P
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 386 RIIGHGAFGTVYKGI---LPQNGDI--IAVKRCSHNSQGKDE--FLSELSIIGTLRHRNL 438
R +GHGAFG VY+G +P + +AVK +DE FL E II H+N+
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI 96
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL-------GVASALA 491
VR G + ++ +LM G L L E R P P S +L +A
Sbjct: 97 VRCIGVSLQSLPRFILLELMAGGDLKSFLRETR-PRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQV-EHDKSPDATVAAGTMGY 547
YL EN IHRD+ N +L G A++GDFG+A+ + A + +
Sbjct: 156 YLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKW 212
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ PE + G T KTD +S+G ++ E+ S
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Query: 388 IGHGAFGTVYKGILPQNGDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLVRLQG 443
+G G FG+V +G+ I A+K ++ D E + E I+ L + +VRL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 444 WCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
C + ++LV ++ G L K L R +P + +++L V+ + YL E +H
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVH 133
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGRATEK 561
RD+ N++L A++ DFGL++ + D S +AG + + APE + + + +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 562 TDVFSYGAVVLEVAS-GRRPIEK 583
+DV+SYG + E S G++P +K
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKK 216
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 114/221 (51%), Gaps = 37/221 (16%)
Query: 388 IGHGAFGTVY----KGILP-QNGDIIAVKRCSHNSQ-GKDEFLSELSIIGTLRHRNLVRL 441
+G GAFG V+ +LP Q+ ++AVK S+ + +F E ++ L+H+++VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL----------LGVASALA 491
G C E +L+V++ M +G L++ L RS P +K+L LG+ LA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFL---RSHGP---DAKLLAGGEDVAPGPLGLGQLLA 139
Query: 492 YLHQECENQV-------IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG- 543
Q V +HRD+ T N ++ +G ++GDFG++R + S D G
Sbjct: 140 VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI---YSTDYYRVGGR 196
Query: 544 ---TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ ++ PE +L + T ++DV+S+G V+ E+ + G++P
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 37/221 (16%)
Query: 388 IGHGAFGTVY----KGILP-QNGDIIAVKRCSHNSQ-GKDEFLSELSIIGTLRHRNLVRL 441
+G GAFG V+ +LP Q+ ++AVK S+ + +F E ++ L+H+++VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 442 QGWCHEKGEILLVYDLMPNGSLD----------KALFEARSPLPWPHRSKILLGVASA-- 489
G C E +L+V++ M +G L+ K L P P LL VAS
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 490 -----LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG- 543
LA LH +HRD+ T N ++ +G ++GDFG++R + S D G
Sbjct: 169 AGMVYLAGLH------FVHRDLATRNCLVGQGLVVKIGDFGMSRDI---YSTDYYRVGGR 219
Query: 544 ---TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ ++ PE +L + T ++DV+S+G V+ E+ + G++P
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 386 RIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
R +G G FG V Y G+ +AVK S G + E+ I+ L H N+V
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 440 RLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+ +G C E G I L+ + +P+GSL + L + ++ + + K + + + YL
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS-- 144
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA---AGTMGYLAPEYLL 554
Q +HRD+ N++++ ++GDFGL + +E DK TV + + APE L+
Sbjct: 145 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE-XXTVKDDRDSPVFWYAPECLM 202
Query: 555 TGRATEKTDVFSYGAVVLEV 574
+ +DV+S+G + E+
Sbjct: 203 QSKFYIASDVWSFGVTLHEL 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 386 RIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNLV 439
R +G G FG V Y G+ +AVK S G + E+ I+ L H N+V
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 440 RLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+ +G C E G I L+ + +P+GSL + L + ++ + + K + + + YL
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS-- 132
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA---AGTMGYLAPEYLL 554
Q +HRD+ N++++ ++GDFGL + +E DK TV + + APE L+
Sbjct: 133 -RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE-XXTVKDDRDSPVFWYAPECLM 190
Query: 555 TGRATEKTDVFSYGAVVLEV 574
+ +DV+S+G + E+
Sbjct: 191 QSKFYIASDVWSFGVTLHEL 210
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK-DEFLSELSIIGTLRHRNLVRLQGWCH 446
+G GAFG VYK + + A K S+ + ++++ E+ I+ + H N+V+L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
+ + ++ + G++D + E PL + AL YLH +N++IHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 507 KTSNIMLDEGFNARLGDFGL-ARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE----- 560
K NI+ + +L DFG+ A+ + D + GT ++APE ++ + +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI--GTPYWMAPEVVMCETSKDRPYDY 219
Query: 561 KTDVFSYGAVVLEVASGRRP 580
K DV+S G ++E+A P
Sbjct: 220 KADVWSLGITLIEMAEIEPP 239
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 376 RSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH 435
+ + F+ +G G++G+VYK I + G I+A+K+ S + E + E+SI+
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-EIIKEISIMQQCDS 83
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++V+ G + ++ +V + GS+ + L + IL L YLH
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH- 142
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
+ IHRD+K NI+L+ +A+L DFG+A Q+ D GT ++APE +
Sbjct: 143 --FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT-DXMAKRNXVIGTPFWMAPEVIQE 199
Query: 556 GRATEKTDVFSYGAVVLEVASGRRP 580
D++S G +E+A G+ P
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDI-IAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G G V+ G NG +AVK S D FL+E +++ L+H+ LVRL
Sbjct: 21 LGAGQAGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQECENQVI 502
++ I ++ + M NGSL L ++P LL +A +A++ E I
Sbjct: 79 QE-PIYIITEYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYI 131
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT 562
HRD++ +NI++ + + ++ DFGLAR +E + A + + APE + G T K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 563 DVFSYGAVVLEVAS-GRRP 580
DV+S+G ++ E+ + GR P
Sbjct: 192 DVWSFGILLTEIVTHGRIP 210
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRN---LVRLQ 442
+G G G V+K + G +IAVK R S N + L +L ++ L+ + +V+
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQCF 90
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
G ++ + +LM +K + P+P K+ + + AL YL ++ + VI
Sbjct: 91 GTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVI 147
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRDVK SNI+LDE +L DFG++ ++ DK+ D + AG Y+APE + T+
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDPTKPD 205
Query: 561 ---KTDVFSYGAVVLEVASGRRP 580
+ DV+S G ++E+A+G+ P
Sbjct: 206 YDIRADVWSLGISLVELATGQFP 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 17/220 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE---FLSELSIIGTLRHRNLVRLQGW 444
IG G++G K +G I+ K + S + E +SE++++ L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 445 CHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ-- 500
++ + +V + G L + + + + +L V + L +EC +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD-EEFVLRVMTQLTLALKECHRRSD 132
Query: 501 ----VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V+HRD+K +N+ LD N +LGDFGLAR + HD S A GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKTFVGTPYYMSPEQMNRM 191
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI----EKEITGVGKVG 592
EK+D++S G ++ E+ + P +KE+ G + G
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 17/220 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE---FLSELSIIGTLRHRNLVRLQGW 444
IG G++G K +G I+ K + S + E +SE++++ L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 445 CHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ-- 500
++ + +V + G L + + + + +L V + L +EC +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD-EEFVLRVMTQLTLALKECHRRSD 132
Query: 501 ----VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V+HRD+K +N+ LD N +LGDFGLAR + HD S A GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKAFVGTPYYMSPEQMNRM 191
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI----EKEITGVGKVG 592
EK+D++S G ++ E+ + P +KE+ G + G
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 17/253 (6%)
Query: 365 RMPKEFSYRELRSA---------TKCFNANRI-IGHGAFGTVYKGILPQNGDIIAVKRCS 414
R P+ S+ + R+A + + N I IG G+ G V + +G ++AVK+
Sbjct: 6 REPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD 65
Query: 415 HNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP 473
Q + E L +E+ I+ +H N+V + E+ +V + + G+L + R
Sbjct: 66 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-- 123
Query: 474 LPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD 533
+ + + L V AL+ LH + VIHRD+K+ +I+L +L DFG QV +
Sbjct: 124 MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 180
Query: 534 KSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
P GT ++APE + + D++S G +V+E+ G P E +
Sbjct: 181 -VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 239
Query: 594 ASNLVEWVWSLHR 606
NL + +LH+
Sbjct: 240 RDNLPPRLKNLHK 252
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLR- 434
AT + IG GA+GTVYK P +G +A+K R + +G +S + + LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP--ISTVREVALLRR 59
Query: 435 -----HRNLVRLQGWC-----HEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHRSKIL 483
H N+VRL C + ++ LV++ + + L L +A P LP ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 484 LGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG 543
L +LH C ++HRD+K NI++ G +L DFGLAR + + D V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV-- 173
Query: 544 TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI---EKEITGVGKV 591
T+ Y APE LL D++S G + E+ R+P+ E +GK+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKI 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 17/253 (6%)
Query: 365 RMPKEFSYRELRSA---------TKCFNANRI-IGHGAFGTVYKGILPQNGDIIAVKRCS 414
R P+ S+ + R+A + + N I IG G+ G V + +G ++AVK+
Sbjct: 4 REPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD 63
Query: 415 HNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP 473
Q + E L +E+ I+ +H N+V + E+ +V + + G+L + R
Sbjct: 64 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-- 121
Query: 474 LPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD 533
+ + + L V AL+ LH + VIHRD+K+ +I+L +L DFG QV +
Sbjct: 122 MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 178
Query: 534 KSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
P GT ++APE + + D++S G +V+E+ G P E +
Sbjct: 179 -VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 237
Query: 594 ASNLVEWVWSLHR 606
NL + +LH+
Sbjct: 238 RDNLPPRLKNLHK 250
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG GA GTVY + G +A+++ + Q K E + +E+ ++ ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ +V + + GSL + E + + + + AL +LH NQVIHRD+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDI 142
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ NI+L + +L DFG Q+ ++S +T+ GT ++APE + K D++S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 567 YGAVVLEVASGRRP 580
G + +E+ G P
Sbjct: 202 LGIMAIEMIEGEPP 215
>pdb|2PEL|A Chain A, Peanut Lectin
pdb|2PEL|B Chain B, Peanut Lectin
pdb|2PEL|C Chain C, Peanut Lectin
pdb|2PEL|D Chain D, Peanut Lectin
pdb|2TEP|A Chain A, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|B Chain B, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|C Chain C, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|D Chain D, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|1CIW|A Chain A, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|B Chain B, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|C Chain C, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|D Chain D, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1QF3|A Chain A, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|B Chain B, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|C Chain C, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|D Chain D, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1CR7|A Chain A, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|B Chain B, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|C Chain C, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|D Chain D, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|E Chain E, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|F Chain F, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|G Chain G, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|H Chain H, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CQ9|A Chain A, Peanut Lectin-Triclinic Form
pdb|1CQ9|B Chain B, Peanut Lectin-Triclinic Form
pdb|1CQ9|C Chain C, Peanut Lectin-Triclinic Form
pdb|1CQ9|D Chain D, Peanut Lectin-Triclinic Form
pdb|1RIR|A Chain A, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|B Chain B, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|C Chain C, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|D Chain D, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIT|A Chain A, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|B Chain B, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|C Chain C, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|D Chain D, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|2DH1|A Chain A, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|B Chain B, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|C Chain C, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|D Chain D, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DV9|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DVA|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVB|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVD|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVF|A Chain A, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|B Chain B, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|C Chain C, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|D Chain D, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVG|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
Length = 236
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 17/224 (7%)
Query: 35 EFDFGTLTLA--SLKLLGDAH-MNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTP 91
F+F + + ++ GD ++NG+++LT V + G+ LY+ PVR T
Sbjct: 5 SFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKV--NSVGRVLYAMPVRIWSSATGNV 62
Query: 92 AXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQV--GS-AGGSLGLLDEKGAGLGFVAVE 148
A + ++ G+ F I P+ Q+ GS GG+LG+ D KGAG FV VE
Sbjct: 63 ASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGH-FVGVE 121
Query: 149 FDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNI 208
FDT + E++D +HVG+D+NS VD++ T+ + SG +V + YD T+ +
Sbjct: 122 FDTYSNSEYNDPPTDHVGIDVNS-----VDSVKTVPWNSVSGAVVKVTVIYDSSTKT--L 174
Query: 209 SVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGS-TQGSTEIH 251
SV+ +N + ++ +DL + + + GFS S + G +IH
Sbjct: 175 SVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIH 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 386 RIIGHGAFGTVYKG-----ILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
R +G G+FG VY+G I + +AVK + ++ ++ EFL+E S++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE---------ARSPLPWPHRSKILLGVASA 489
VRL G + L+V +LM +G L L R P ++ +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYL 548
+AYL+ + + +HRD+ N M+ F ++GDFG+ R + E D + ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVAS 576
APE L G T +D++S+G V+ E+ S
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 128/292 (43%), Gaps = 46/292 (15%)
Query: 383 NANRIIGHGAFGTVYKGIL---PQNGDIIAVKRCSH--NSQGKDEFLSELSIIGTLRHRN 437
+++R+IG G FG VY G QN A+K S Q + FL E ++ L H N
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 438 LVRLQG-WCHEKG--EILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL---LGVASALA 491
++ L G +G +LL Y M +G L + + RSP P ++ L VA +
Sbjct: 84 VLALIGIMLPPEGLPHVLLPY--MCHGDLLQFI---RSPQRNPTVKDLISFGLQVARGME 138
Query: 492 YLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV---EHDKSPDATVAAGTMGYL 548
YL E + +HRD+ N MLDE F ++ DFGLAR + E+ A + +
Sbjct: 139 YL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREG 608
A E L T R T K+DV+S+G ++ E+ + P + I + +G
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-----------QG 244
Query: 609 RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAE 660
R L + + + V C DP RPT R +LVGE E
Sbjct: 245 RRLPQPEYCPDSLYQ---------VMQQCWEADPAVRPTFR----VLVGEVE 283
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 386 RIIGHGAFGTVYKG-----ILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
R +G G+FG VY+G I + +AVK + ++ ++ EFL+E S++ ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE---------ARSPLPWPHRSKILLGVASA 489
VRL G + L+V +LM +G L L R P ++ +A
Sbjct: 80 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYL 548
+AYL+ + + +HRD+ N M+ F ++GDFG+ R + E D + ++
Sbjct: 140 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVAS 576
APE L G T +D++S+G V+ E+ S
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 386 RIIGHGAFGTVYKG-----ILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
R +G G+FG VY+G I + +AVK + ++ ++ EFL+E S++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE---------ARSPLPWPHRSKILLGVASA 489
VRL G + L+V +LM +G L L R P ++ +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYL 548
+AYL+ + + +HRD+ N M+ F ++GDFG+ R + E D + ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVAS 576
APE L G T +D++S+G V+ E+ S
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|B Chain B, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|C Chain C, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|D Chain D, Peanut Lectin Complexed With C-Lactose
pdb|1V6I|A Chain A, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|B Chain B, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|C Chain C, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|D Chain D, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6J|A Chain A, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|B Chain B, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|C Chain C, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|D Chain D, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6K|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6L|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6M|A Chain A, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|B Chain B, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|C Chain C, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|D Chain D, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|E Chain E, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|F Chain F, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|G Chain G, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|H Chain H, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6N|A Chain A, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|B Chain B, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|C Chain C, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|D Chain D, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|E Chain E, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|F Chain F, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|G Chain G, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|H Chain H, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6O|A Chain A, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|B Chain B, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|C Chain C, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|D Chain D, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|E Chain E, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|F Chain F, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|G Chain G, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|H Chain H, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
Length = 232
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 17/224 (7%)
Query: 35 EFDFGTLTLA--SLKLLGDAH-MNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTP 91
F+F + + ++ GD ++NG+++LT V + G+ LY+ PVR T
Sbjct: 5 SFNFNSFSEGNPAINFQGDVTVLSNGNIQLTNLNKV--NSVGRVLYAMPVRIWSSATGNV 62
Query: 92 AXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQV--GS-AGGSLGLLDEKGAGLGFVAVE 148
A + ++ G+ F I P+ Q+ GS GG+LG+ D KGAG FV VE
Sbjct: 63 ASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGH-FVGVE 121
Query: 149 FDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNI 208
FDT + E++D +HVG+D+NS VD++ T+ + SG +V + YD T+ +
Sbjct: 122 FDTYSNSEYNDPPTDHVGIDVNS-----VDSVKTVPWNSVSGAVVKVTVIYDSSTKT--L 174
Query: 209 SVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGS-TQGSTEIH 251
SV+ +N + ++ +DL + + + GFS S + G +IH
Sbjct: 175 SVAVTNDNGDITTIAQVVDLKAKLPERVKFGFSASGSLGGRQIH 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 17 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 63
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 124 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 179
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 180 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 18 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 64
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 65 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 124
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 125 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 180
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 181 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 22 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 68
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 69 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 128
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 129 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 184
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 185 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 237
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 17 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 63
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 124 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 179
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 180 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 25 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 71
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 72 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 131
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 132 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 187
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 188 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 240
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 29 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 75
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 76 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 135
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 136 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 191
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 192 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 244
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 17 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 63
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 124 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 179
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 180 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 30 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 76
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 77 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 136
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 137 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 192
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 193 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 36 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 82
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 83 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 142
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 143 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 198
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 199 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 45 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 91
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 92 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 151
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 152 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 207
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 208 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 260
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 21 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 67
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 68 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 127
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 128 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 183
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 184 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 236
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 95/207 (45%), Gaps = 8/207 (3%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F ++G G+F VY+ G +A+K + K +E+ I L+H +
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
++ L + + + LV ++ NG +++ L P + + + + YLH
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS-- 130
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+ ++HRD+ SN++L N ++ DFGLA Q++ T+ GT Y++PE
Sbjct: 131 -HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTL-CGTPNYISPEIATRSA 188
Query: 558 ATEKTDVFSYGAVVLEVASGRRPIEKE 584
++DV+S G + + GR P + +
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTD 215
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 17 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 63
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 124 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 179
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 180 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 17/253 (6%)
Query: 365 RMPKEFSYRELRSA---------TKCFNANRI-IGHGAFGTVYKGILPQNGDIIAVKRCS 414
R P+ S+ + R+A + + N I IG G+ G V + +G ++AVK+
Sbjct: 49 REPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD 108
Query: 415 HNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP 473
Q + E L +E+ I+ +H N+V + E+ +V + + G+L + R
Sbjct: 109 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-- 166
Query: 474 LPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD 533
+ + + L V AL+ LH + VIHRD+K+ +I+L +L DFG QV +
Sbjct: 167 MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223
Query: 534 KSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
P GT ++APE + + D++S G +V+E+ G P E +
Sbjct: 224 -VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 282
Query: 594 ASNLVEWVWSLHR 606
NL + +LH+
Sbjct: 283 RDNLPPRLKNLHK 295
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 29 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 75
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 76 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 135
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 136 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 191
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 192 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 244
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 51 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 97
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 98 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 158 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 213
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 214 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 266
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|B Chain B, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|C Chain C, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|D Chain D, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJQ|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UK9|A Chain A, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|B Chain B, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|C Chain C, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|D Chain D, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|E Chain E, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|F Chain F, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|G Chain G, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|H Chain H, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UL2|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
Length = 281
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 103/214 (48%), Gaps = 12/214 (5%)
Query: 36 FDFGTLTLASLKLLGDAHMNNGSVRLTRDVT--VPYDGA-GKALYSKPVRFRLPGTHTPA 92
F F +L L DA +++G +R+T+ VP G+ G+A YS P++ T T A
Sbjct: 29 FTFKKFNETNLILQRDATVSSGKLRITKAAENGVPTAGSLGRAFYSTPIQIWDNTTGTVA 88
Query: 93 XXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFD 150
+ N +S GLAF + P G Q GG LGL D K + VAVEFD
Sbjct: 89 SWATSFTFNLQAPNAASPADGLAFALVPVGSQPKDKGGFLGLFDSKNYASSNQTVAVEFD 148
Query: 151 TLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISV 210
T + + D H+G+D+NS+ S + T + D +G+ I YD T S+
Sbjct: 149 TFYNGGW-DPTERHIGIDVNSIKS-----IKTTSWDFANGENAEVLITYDSSTNLLVASL 202
Query: 211 SYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST 244
+ + K I+S +DL + +++ VGFS +T
Sbjct: 203 VHPSQKTSF-IVSERVDLTSVLPEWVSVGFSATT 235
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 51 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 97
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 98 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 157
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 158 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 213
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 214 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 266
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 46 LKLLGDAHMNNGSV-RLTRDVT-VP-YDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXI 102
LKL DA +++ SV LT+ V VP ++ G+ALY+KPV+ T A I
Sbjct: 17 LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSI 76
Query: 103 TNLNPSSIGA-GLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDTLMDVEFSDIN 161
P A GL F I P Q G GG G+ + + FVAVEFDT + D
Sbjct: 77 RQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPL-SPYPFVAVEFDTFRNTW--DPQ 133
Query: 162 GNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPI 221
H+G+D+NS++ST+ T+ L +G + N I+YD T+ ++ + + +L +
Sbjct: 134 IPHIGIDVNSVISTK-----TVPFTLDNGGIANVVIKYDASTKILHVVLVFPSLG-TIYT 187
Query: 222 LSFTLDLDQYVNDFMYVGFSGST-------QGSTEIH 251
++ +DL Q + + + VGFS +T + +TE H
Sbjct: 188 IADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETH 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 55 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 101
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 102 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 161
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 162 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 217
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 218 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 270
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 96 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 142
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 143 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 202
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 203 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 258
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 259 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 311
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 386 RIIGHGAFGTVYKG-----ILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
R +G G+FG VY+G I + +AVK + ++ ++ EFL+E S++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE---------ARSPLPWPHRSKILLGVASA 489
VRL G + L+V +LM +G L L R P ++ +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYL 548
+AYL+ + + +HRD+ N M+ F ++GDFG+ R + E D + ++
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVAS 576
APE L G T +D++S+G V+ E+ S
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 117/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ + + K+ E
Sbjct: 53 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---E 99
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 100 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 159
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 160 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 215
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 216 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 268
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 46 LKLLGDAHMNNGSV-RLTRDVT-VP-YDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXI 102
LKL DA +++ SV LT+ V VP ++ G+ALY+KPV+ T A I
Sbjct: 18 LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSI 77
Query: 103 TNLNPSSIGA-GLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDTLMDVEFSDIN 161
P A GL F I P Q G GG G+ + + FVAVEFDT + D
Sbjct: 78 RQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPL-SPYPFVAVEFDTFRNTW--DPQ 134
Query: 162 GNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPI 221
H+G+D+NS++ST+ T+ L +G + N I+YD T+ ++ + + +L +
Sbjct: 135 IPHIGIDVNSVISTK-----TVPFTLDNGGIANVVIKYDASTKILHVVLVFPSLG-TIYT 188
Query: 222 LSFTLDLDQYVNDFMYVGFSGST-------QGSTEIH 251
++ +DL Q + + + VGFS +T + +TE H
Sbjct: 189 IADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETH 225
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 46 LKLLGDAHMNNGSV-RLTRDVT-VP-YDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXI 102
LKL DA +++ SV LT+ V VP ++ G+ALY+KPV+ T A I
Sbjct: 17 LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSI 76
Query: 103 TNLNPSSIGA-GLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDTLMDVEFSDIN 161
P A GL F I P Q G GG G+ + + FVAVEFDT + D
Sbjct: 77 RQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPL-SPYPFVAVEFDTFRNTW--DPQ 133
Query: 162 GNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPI 221
H+G+D+NS++ST+ T+ L +G + N I+YD T+ ++ + + +L +
Sbjct: 134 IPHIGIDVNSVISTK-----TVPFTLDNGGIANVVIKYDASTKILHVVLVFPSLG-TIYT 187
Query: 222 LSFTLDLDQYVNDFMYVGFSGST-------QGSTEIH 251
++ +DL Q + + + VGFS +T + +TE H
Sbjct: 188 IADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETH 224
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 10/195 (5%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G + TVYKG +++A+K R H + E+S++ L+H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
H + + LV++ + + L + L + + + + L + LAY H++ +V+HRD
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRD 125
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVE-HDKSPDATVAAGTMGYLAPEYLL-TGRATEKTD 563
+K N++++E +L DFGLAR K+ D V T+ Y P+ LL + + + D
Sbjct: 126 LKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYSTQID 183
Query: 564 VFSYGAVVLEVASGR 578
++ G + E+A+GR
Sbjct: 184 MWGVGCIFYEMATGR 198
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 17/220 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE---FLSELSIIGTLRHRNLVRLQGW 444
IG G++G K +G I+ K + S + E +SE++++ L+H N+VR
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 445 CHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ-- 500
++ + +V + G L + + + + +L V + L +EC +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD-EEFVLRVMTQLTLALKECHRRSD 132
Query: 501 ----VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V+HRD+K +N+ LD N +LGDFGLAR + HD+ A GT Y++PE +
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF-AKEFVGTPYYMSPEQMNRM 191
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI----EKEITGVGKVG 592
EK+D++S G ++ E+ + P +KE+ G + G
Sbjct: 192 SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG 231
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 126/273 (46%), Gaps = 31/273 (11%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS----HNSQGKDEFLSELSIIGTLRHRN 437
F + IG G F VY+ +G +A+K+ +++ + + + E+ ++ L H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKAL--FEARSPLPWPHRS--KILLGVASALAYL 493
+++ E E+ +V +L G L + + F+ + L P R+ K + + SAL ++
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL-IPERTVWKYFVQLCSALEHM 152
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H +V+HRD+K +N+ + +LGD GL R K+ A GT Y++PE +
Sbjct: 153 H---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTPYYMSPERI 208
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTA 613
K+D++S G ++ E+A+ + P G NL + +
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPF---------YGDKMNLYSLCKKIEQCDYPPLP 259
Query: 614 ADARLEGQFDEAEMRRVLLVGLACSHPDPLARP 646
+D E E+R+ LV + C +PDP RP
Sbjct: 260 SDHYSE------ELRQ--LVNM-CINPDPEKRP 283
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 386 RIIGHGAFGTVYKG-----ILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
R +G G+FG VY+G I + +AVK + ++ ++ EFL+E S++ ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE---------ARSPLPWPHRSKILLGVASA 489
VRL G + L+V +LM +G L L R P ++ +A
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYL 548
+AYL+ + + +HRD+ N M+ F ++GDFG+ R + E D + ++
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVAS 576
APE L G T +D++S+G V+ E+ S
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L H + ++ LV++ + D A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS--- 121
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLTG 556
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 178
Query: 557 R-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 179 KYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 354 KKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRC 413
K + + D +P+E + +G G FG V+ ++ + AVK
Sbjct: 167 KPQKPWEKDAWEIPRE-----------SLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTM 214
Query: 414 SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGS-LDKALFEARS 472
S + FL+E +++ TL+H LV+L K I ++ + M GS LD + S
Sbjct: 215 KPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGS 273
Query: 473 PLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
P P +A +A++ Q IHRD++ +NI++ ++ DFGLAR
Sbjct: 274 KQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR---- 326
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
A + + APE + G T K+DV+S+G +++E+ + GR P
Sbjct: 327 ------VGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 9/207 (4%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN----SQGKDEFLSELSIIGTLRH 435
K + R +G G F Y+ ++ A K + K++ +E++I +L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++V G+ + + +V ++ SL + L + R + P + + YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
N+VIHRD+K N+ L++ + ++GDFGLA ++E D T+ GT Y+APE L
Sbjct: 161 ---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL-CGTPNYIAPEVLCK 216
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPIE 582
+ + D++S G ++ + G+ P E
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 17/253 (6%)
Query: 365 RMPKEFSYRELRSA---------TKCFNANRI-IGHGAFGTVYKGILPQNGDIIAVKRCS 414
R P+ S+ + R+A + + N I IG G+ G V + +G ++AVK+
Sbjct: 126 REPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMD 185
Query: 415 HNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP 473
Q + E L +E+ I+ +H N+V + E+ +V + + G+L + R
Sbjct: 186 LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-- 243
Query: 474 LPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD 533
+ + + L V AL+ LH + VIHRD+K+ +I+L +L DFG QV +
Sbjct: 244 MNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300
Query: 534 KSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
P GT ++APE + + D++S G +V+E+ G P E +
Sbjct: 301 -VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI 359
Query: 594 ASNLVEWVWSLHR 606
NL + +LH+
Sbjct: 360 RDNLPPRLKNLHK 372
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 376 RSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSEL 427
+ + + F R +G G+FG V+ NG A+K R DE L L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM-L 60
Query: 428 SIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
SI+ H ++R+ G + +I ++ D + G L +L P P V
Sbjct: 61 SIVT---HPFIIRMWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQRFPNPVAKFYAAEVC 116
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA-AGTMG 546
AL YLH + +I+RD+K NI+LD+ + ++ DFG A+ V PD T GT
Sbjct: 117 LALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-----PDVTYXLCGTPD 168
Query: 547 YLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
Y+APE + T + D +S+G ++ E+ +G P
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 7/220 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG G+ G V + +G ++AVK+ Q + E L +E+ I+ +H N+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ +V + + G+L + R + + + L V AL+ LH + VIHRD+
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 142
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ +I+L +L DFG QV + P GT ++APE + + D++S
Sbjct: 143 KSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 567 YGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHR 606
G +V+E+ G P E + NL + +LH+
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 241
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 374 ELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS--HNSQGKDEF----LSEL 427
+++S K + +G G F TVYK I+A+K+ H S+ KD L E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 428 SIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
++ L H N++ L K I LV+D M L+ + + L H +L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG--TM 545
L YLHQ + ++HRD+K +N++LDE +L DFGLA+ SP+ T
Sbjct: 123 QGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSF---GSPNRAYXHQVVTR 176
Query: 546 GYLAPEYLLTGRATE-KTDVFSYGAVVLEV 574
Y APE L R D+++ G ++ E+
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG GA GTVY + G +A+++ + Q K E + +E+ ++ ++ N+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ +V + + GSL + E + + + + AL +LH NQVIHR++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS---NQVIHRNI 143
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ NI+L + +L DFG Q+ ++S +T+ GT ++APE + K D++S
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM-VGTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 567 YGAVVLEVASGRRP 580
G + +E+ G P
Sbjct: 203 LGIMAIEMIEGEPP 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 20/205 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FG ++G +K + +S+ ++E E++++ ++H N+V+ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 445 CHEKGEILLVYDLMPNGSLDK-------ALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
E G + +V D G L K LF+ L W + + AL ++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQICLALKHVH--- 142
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+ +++HRD+K+ NI L + +LGDFG+AR V + A GT YL+PE
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIAR-VLNSTVELARACIGTPYYLSPEICENKP 201
Query: 558 ATEKTDVFSYGAVVLEVASGRRPIE 582
K+D+++ G V+ E+ + + E
Sbjct: 202 YNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L H + ++ LV++ + D A + +P P L + LA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS--- 124
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLTG 556
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 557 R-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L H + ++ LV++ + D A + +P P L + LA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHS--- 123
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLTG 556
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 180
Query: 557 R-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 181 KYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ QGK E
Sbjct: 17 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRE 63
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 124 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 179
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 180 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 104/203 (51%), Gaps = 11/203 (5%)
Query: 388 IGHGAFGTVYKGILPQNGDII--AVKRCSHNSQGKD--EFLSELSIIGTLRHRNLVRLQG 443
+G G FG+V +G+ I A+K ++ D E + E I+ L + +VRL G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 444 WCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
C + ++LV ++ G L K L R +P + +++L V+ + YL E +H
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVH 459
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGRATEK 561
R++ N++L A++ DFGL++ + D S +AG + + APE + + + +
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 562 TDVFSYGAVVLEVAS-GRRPIEK 583
+DV+SYG + E S G++P +K
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKK 542
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 117/237 (49%), Gaps = 22/237 (9%)
Query: 352 HVKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK 411
H+ E+ ++R+ KE +++++ ++G GAFGTVYKG+ G+ + +
Sbjct: 3 HMASGEAPNQALLRILKETEFKKIK----------VLGSGAFGTVYKGLWIPEGEKVKIP 52
Query: 412 ------RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDK 465
R + + + E L E ++ ++ + ++ RL G C + L+ LMP G L
Sbjct: 53 VAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLD 111
Query: 466 ALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFG 525
+ E + + + + +A + YL + +++HRD+ N+++ + ++ DFG
Sbjct: 112 YVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFG 168
Query: 526 LARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
LA+ + +K A + ++A E +L T ++DV+SYG V E+ + G +P
Sbjct: 169 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG GA GTVY + G +A+++ + Q K E + +E+ ++ ++ N+V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ +V + + GSL + E + + + + AL +LH NQVIHRD+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDI 143
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ NI+L + +L DFG Q+ ++S + + GT ++APE + K D++S
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRKAYGPKVDIWS 202
Query: 567 YGAVVLEVASGRRP 580
G + +E+ G P
Sbjct: 203 LGIMAIEMIEGEPP 216
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ QGK E
Sbjct: 17 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRE 63
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY 123
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 124 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 179
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 180 VSYICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 7/220 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG G+ G V + +G ++AVK+ Q + E L +E+ I+ +H N+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ +V + + G+L + R + + + L V AL+ LH + VIHRD+
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 146
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ +I+L +L DFG QV + P GT ++APE + + D++S
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 205
Query: 567 YGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHR 606
G +V+E+ G P E + NL + +LH+
Sbjct: 206 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK 245
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG GA GTVY + G +A+++ + Q K E + +E+ ++ ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ +V + + GSL + E + + + + AL +LH NQVIHRD+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDI 142
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ NI+L + +L DFG Q+ ++S + + GT ++APE + K D++S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXM-VGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 567 YGAVVLEVASGRRP 580
G + +E+ G P
Sbjct: 202 LGIMAIEMIEGEPP 215
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG GA GTVY + G +A+++ + Q K E + +E+ ++ ++ N+V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ +V + + GSL + E + + + + AL +LH NQVIHRD+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDI 142
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ NI+L + +L DFG Q+ ++S + + GT ++APE + K D++S
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM-VGTPYWMAPEVVTRKAYGPKVDIWS 201
Query: 567 YGAVVLEVASGRRP 580
G + +E+ G P
Sbjct: 202 LGIMAIEMIEGEPP 215
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 36 FDFGTLTLASLKLLGDAHMNN-GSVRLTR--DVTVPYDGA-GKALYSKPVRFRLPGTHTP 91
F+F +L L DA +++ G +RLT P G+ G+A YS P++ T T
Sbjct: 6 FNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTV 65
Query: 92 AXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDT 151
A I N + GLAF + P G Q GG LGL D + VAVEFDT
Sbjct: 66 ASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNFHTVAVEFDT 125
Query: 152 LMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVS 211
L + ++ D H+G+D+NS+ S + D +N G+ I YD T S+
Sbjct: 126 LYNKDW-DPTERHIGIDVNSIRSIKTTRWDFVN-----GENAEVLITYDSSTNLLVASLV 179
Query: 212 YSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST 244
Y + K I+S T+DL + +++ VGFS +T
Sbjct: 180 YPSQKTSF-IVSDTVDLKSVLPEWVSVGFSATT 211
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALF---EARSPLPWPHRSKILLGVASALAYLHQ 495
V+L H + ++ LV++ + S+D F A + +P P L + LA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYL 553
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE L
Sbjct: 125 ---HRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 178
Query: 554 LTGR-ATEKTDVFSYGAVVLEVASGR 578
L + + D++S G + E+ + R
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALF---EARSPLPWPHRSKILLGVASALAYLHQ 495
V+L H + ++ LV++ + S+D F A + +P P L + LA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYL 553
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE L
Sbjct: 123 ---HRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEIL 176
Query: 554 LTGR-ATEKTDVFSYGAVVLEVASGR 578
L + + D++S G + E+ + R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKD----EFLSELSIIGTLRHRN 437
F R +G G FG VY ++ I+A+K + K+ + E+ I L H N
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
++RL + +++ I L+ + P G L K L + + I+ +A AL Y H +
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCHGK- 142
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+VIHRD+K N++L ++ DFG + H S GT+ YL PE +
Sbjct: 143 --KVIHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 558 ATEKTDVFSYGAVVLEVASGRRPIE 582
EK D++ G + E+ G P E
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 29/235 (12%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSE 426
P+E SY + ++IG+G+FG VY+ L +G+++A+K+ QGK E
Sbjct: 17 PQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRE 63
Query: 427 LSIIGTLRHRNLVRLQGWCHEKGE------ILLVYDLMPNG--SLDKALFEARSPLPWPH 478
L I+ L H N+VRL+ + + GE + LV D +P + + A+ LP +
Sbjct: 64 LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY 123
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPD 537
+ + +LAY+H + HRD+K N++LD +L DFG A+Q+ + P+
Sbjct: 124 VKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PN 179
Query: 538 ATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ Y APE + T DV+S G V+ E+ G +PI +GV ++
Sbjct: 180 VSXICSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQL 232
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 15/205 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR--CSHNSQGKDEFLSELSI-IGTLRHRNLVRLQGW 444
+G GA+G V K +G I+AVKR + NSQ + L +L I + T+ V G
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 445 CHEKGEILLVYDLMPNGSLDK---ALFEARSPLPWPHRSKILLGVASALAYLHQECENQV 501
+G++ + +LM + SLDK + + +P KI + + AL +LH + V
Sbjct: 75 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SV 131
Query: 502 IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL---LTGRA 558
IHRDVK SN++++ ++ DFG++ + D + D + AG Y+APE + L +
Sbjct: 132 IHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD--IDAGCKPYMAPERINPELNQKG 189
Query: 559 -TEKTDVFSYGAVVLEVASGRRPIE 582
+ K+D++S G ++E+A R P +
Sbjct: 190 YSVKSDIWSLGITMIELAILRFPYD 214
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 385 NRIIGHGAFGTVY----KGILPQNGDI-IAVKRCSHNS-QGKDEFLSELSIIGTLRHRNL 438
R +G GAFG V+ + P+ I +AVK S + +F E ++ L+H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-------------LPWPHRSKILLG 485
V+ G C E +++V++ M +G L+K L A P L I
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFL-RAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG-- 543
+A+ + YL +HRD+ T N ++ E ++GDFG++R V S D G
Sbjct: 137 IAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV---YSTDYYRVGGHT 190
Query: 544 --TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ ++ PE ++ + T ++DV+S G V+ E+ + G++P
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 40/225 (17%)
Query: 386 RIIGHGAFGTVYK----GILP-QNGDIIAVKRCSHNSQG--KDEFLSELSIIGTLRHRNL 438
R IG GAFG V++ G+LP + ++AVK + + +F E +++ + N+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-----------------FEAR--SPLPWP-- 477
V+L G C + L+++ M G L++ L AR SP P P
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 478 --HRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
+ I VA+ +AYL E + +HRD+ T N ++ E ++ DFGL+R + S
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI---YS 226
Query: 536 PDATVAAGT----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
D A G + ++ PE + R T ++DV++YG V+ E+ S
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 36 FDFGTLTLASLKLLGDAHMNN-GSVRLTR--DVTVPYDGA-GKALYSKPVRFRLPGTHTP 91
F+F +L L DA +++ G +RLT P G+ G+A YS P++ T T
Sbjct: 6 FNFQRFNETNLILQRDASVSSSGQLRLTNLNGNGEPRVGSLGRAFYSAPIQIWDNTTGTV 65
Query: 92 AXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDT 151
A I N + GLAF + P G Q GG LGL D + VAVEFDT
Sbjct: 66 ASFATSFTFNIQVPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNFHTVAVEFDT 125
Query: 152 LMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVS 211
L + ++ D H+G+D+NS+ S + D +N G+ I YD T S+
Sbjct: 126 LYNKDW-DPTERHIGIDVNSIRSIKTTRWDFVN-----GENAEVLITYDSSTNLLVASLV 179
Query: 212 YSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST 244
Y + K I+S T+DL + +++ VGFS +T
Sbjct: 180 YPSQKTSF-IVSDTVDLKSVLPEWVSVGFSATT 211
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 386 RIIGH-GAFGTVYKGILPQNGDIIAVKRCSHNSQGK-DEFLSELSIIGTLRHRNLVRLQG 443
IIG G FG VYK + + A K S+ + ++++ E+ I+ + H N+V+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 444 WCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
+ + + ++ + G++D + E PL + AL YLH +N++IH
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIH 131
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE--- 560
RD+K NI+ + +L DFG++ + GT ++APE ++ + +
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 191
Query: 561 --KTDVFSYGAVVLEVASGRRP 580
K DV+S G ++E+A P
Sbjct: 192 DYKADVWSLGITLIEMAEIEPP 213
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 76 LIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTS 191
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 117/236 (49%), Gaps = 22/236 (9%)
Query: 353 VKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK- 411
++ E+ ++R+ KE +++++ ++G GAFGTVYKG+ G+ + +
Sbjct: 5 IRSGEAPNQALLRILKETEFKKIK----------VLGSGAFGTVYKGLWIPEGEKVKIPV 54
Query: 412 -----RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKA 466
R + + + E L E ++ ++ + ++ RL G C + L+ LMP G L
Sbjct: 55 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDY 113
Query: 467 LFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGL 526
+ E + + + + +A + YL + +++HRD+ N+++ + ++ DFGL
Sbjct: 114 VREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL 170
Query: 527 ARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
A+ + +K A + ++A E +L T ++DV+SYG V E+ + G +P
Sbjct: 171 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKG-----ILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
R +G G+FG VY+G I + +AVK + ++ ++ EFL+E S++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE---------ARSPLPWPHRSKILLGVASA 489
VRL G + L+V +LM +G L L R P ++ +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG--- 546
+AYL+ + + +HRD+ N M+ F ++GDFG+ R + A G G
Sbjct: 143 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE----TAYYRKGGKGLLP 195
Query: 547 --YLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
++APE L G T +D++S+G V+ E+ S
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 104 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 219
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 220 ASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREK--HKIMHRD 130
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ A GT Y++PE L + ++D++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 566 SYGAVVLEVASGRRPI 581
S G ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREK--HKIMHRD 130
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ A GT Y++PE L + ++D++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 566 SYGAVVLEVASGRRPI 581
S G ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 78 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 135
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 77 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREK--HKIMHRD 130
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ A GT Y++PE L + ++D++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 566 SYGAVVLEVASGRRPI 581
S G ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 387 IIGHGAFGTVYKGILPQNGDII--AVKRCSHNSQGKD--EFLSELSIIGTL-RHRNLVRL 441
+IG G FG V K + ++G + A+KR + D +F EL ++ L H N++ L
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEAR---------------SPLPWPHRSKILLGV 486
G C +G + L + P+G+L L ++R S L V
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 487 ASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
A + YL Q+ Q IHRD+ NI++ E + A++ DFGL+R E TMG
Sbjct: 152 ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKTMG 201
Query: 547 -----YLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
++A E L T +DV+SYG ++ E+ S
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 386 RIIGHGAFGTVYKG-----ILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
R +G G+FG VY+G I + +AVK + ++ ++ EFL+E S++ ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE---------ARSPLPWPHRSKILLGVASA 489
VRL G + L+V +LM +G L L R P ++ +A
Sbjct: 83 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 142
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYL 548
+AYL+ + + +HR++ N M+ F ++GDFG+ R + E D + ++
Sbjct: 143 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVAS 576
APE L G T +D++S+G V+ E+ S
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 80 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 137
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREK--HKIMHRD 130
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ A GT Y++PE L + ++D++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 566 SYGAVVLEVASGRRPI 581
S G ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 26/231 (11%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLR- 434
AT + IG GA+GTVYK P +G +A+K R + +G +S + + LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP--ISTVREVALLRR 59
Query: 435 -----HRNLVRLQGWC-----HEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHRSKIL 483
H N+VRL C + ++ LV++ + + L L +A P LP ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 484 LGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG 543
L +LH C ++HRD+K NI++ G +L DFGLAR + + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-- 173
Query: 544 TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI---EKEITGVGKV 591
T+ Y APE LL D++S G + E+ R+P+ E +GK+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKI 223
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 386 RIIGHGAFGTVYKG-----ILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
R +G G+FG VY+G I + +AVK + ++ ++ EFL+E S++ ++
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 83
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFE---------ARSPLPWPHRSKILLGVASA 489
VRL G + L+V +LM +G L L R P ++ +A
Sbjct: 84 VRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 143
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYL 548
+AYL+ + + +HR++ N M+ F ++GDFG+ R + E D + ++
Sbjct: 144 MAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVAS 576
APE L G T +D++S+G V+ E+ S
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREK--HKIMHRD 130
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ A GT Y++PE L + ++D++
Sbjct: 131 VKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 566 SYGAVVLEVASGRRPI 581
S G ++E+A GR PI
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 93 YSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRD 149
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ A GT Y++PE L + ++D++
Sbjct: 150 VKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIW 206
Query: 566 SYGAVVLEVASGRRPI 581
S G ++E+A GR PI
Sbjct: 207 SMGLSLVEMAVGRYPI 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 76 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 387 IIGHGAFGTVYKGILPQNGDII--AVKRCSHNSQGKD--EFLSELSIIGTL-RHRNLVRL 441
+IG G FG V K + ++G + A+KR + D +F EL ++ L H N++ L
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEAR---------------SPLPWPHRSKILLGV 486
G C +G + L + P+G+L L ++R S L V
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 487 ASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
A + YL Q+ Q IHRD+ NI++ E + A++ DFGL+R E TMG
Sbjct: 142 ARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQE-------VYVKKTMG 191
Query: 547 -----YLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
++A E L T +DV+SYG ++ E+ S
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 78 PHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 135
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 81 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 138
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 108/207 (52%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGI-LPQNGDI---IAVK--RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ +P+ + +A+K R + + + E L E ++ ++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 71 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 128
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 129 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 74 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLE- 131
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 132 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 35/259 (13%)
Query: 346 FSKRYKHVKKSESFTSDIIRMPKEFSYRELRSATKC-FNANRIIGHGAFGTVYK----GI 400
+ R+K ++ E + I P + Y E + + +G GAFG V + G+
Sbjct: 12 YQVRWKIIESYEGNSYTFID-PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 401 LPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTL-RHRNLVRLQGWCHEKGEILLVYD 456
++ + +AVK + + ++ K+ +SEL I+ L +H N+V L G C G +L++ +
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 457 LMPNGSLDKALFEARSP-LPWPHR----------SKILL----GVASALAYLHQECENQV 501
G L L R P L + + S+ LL VA +A+L
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNC 187
Query: 502 IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT----MGYLAPEYLLTGR 557
IHRDV N++L G A++GDFGLAR + +D + + G + ++APE +
Sbjct: 188 IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCV 244
Query: 558 ATEKTDVFSYGAVVLEVAS 576
T ++DV+SYG ++ E+ S
Sbjct: 245 YTVQSDVWSYGILLWEIFS 263
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 81 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 196
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 197 ASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 112/232 (48%), Gaps = 29/232 (12%)
Query: 356 SESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRC-- 413
SE + R+ KE R+L+ ++G G FGTV+KG+ G+ I + C
Sbjct: 17 SEKANKVLARIFKETELRKLK----------VLGSGVFGTVHKGVWIPEGESIKIPVCIK 66
Query: 414 -SHNSQGKDEFLS---ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE 469
+ G+ F + + IG+L H ++VRL G C + LV +P GSL + +
Sbjct: 67 VIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQ 125
Query: 470 ARSPLPWPHRSKILLG----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFG 525
R L ++LL +A + YL E+ ++HR++ N++L ++ DFG
Sbjct: 126 HRGAL----GPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFG 178
Query: 526 LARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+A + DK + A + ++A E + G+ T ++DV+SYG V E+ +
Sbjct: 179 VADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 105/209 (50%), Gaps = 12/209 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 102 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 159
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 160 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRPIE 582
T ++DV+SYG V E+ + G +P +
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 76 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 79 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 123 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLG 178
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN----SQGKDEFLSELSIIGTLRH 435
K + R +G G F Y+ ++ A K + K++ +E++I +L +
Sbjct: 26 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 85
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++V G+ + + +V ++ SL + L + R + P + + YLH
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHN 144
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
N+VIHRD+K N+ L++ + ++GDFGLA ++E D + GT Y+APE L
Sbjct: 145 ---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-CGTPNYIAPEVLCK 200
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAAD 615
+ + D++S G ++ + G+ P E + + N +S+ R + +
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN----EYSVPRHINPVAS-- 254
Query: 616 ARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGE 658
A +RR+L H DP RP+ V ++L E
Sbjct: 255 ---------ALIRRML-------HADPTLRPS---VAELLTDE 278
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 121 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 137
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 73 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 189 ASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 128
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
++V+HRD+K N++++ +L DFGLAR T T+ Y APE LL +
Sbjct: 129 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGXK 186
Query: 558 -ATEKTDVFSYGAVVLEVASGR 578
+ D++S G + E+ + R
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 11/209 (5%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNL 438
K F ++G GAF V+ G + A+K + +D L +E++++ ++H N+
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI 68
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V L+ LV L+ G L + E R S ++ V SA+ YLH E
Sbjct: 69 VTLEDIYESTTHYYLVMQLVSGGELFDRILE-RGVYTEKDASLVIQQVLSAVKYLH---E 124
Query: 499 NQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
N ++HRD+K N++ +E + DFGL++ +++ + A GT GY+APE L
Sbjct: 125 NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQ 181
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPIEKE 584
++ D +S G + + G P +E
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEE 210
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 128
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
++V+HRD+K N++++ +L DFGLAR T T+ Y APE LL +
Sbjct: 129 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCK 186
Query: 558 -ATEKTDVFSYGAVVLEVASGR 578
+ D++S G + E+ + R
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 121 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 137
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 87 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 144
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 145 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 136 YSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREK--HKIMHRD 192
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ A GT Y++PE L + ++D++
Sbjct: 193 VKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIW 249
Query: 566 SYGAVVLEVASGRRPI 581
S G ++E+A GR PI
Sbjct: 250 SMGLSLVEMAVGRYPI 265
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 111 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 168
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 169 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 26/231 (11%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLR- 434
AT + IG GA+GTVYK P +G +A+K R + +G +S + + LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP--ISTVREVALLRR 59
Query: 435 -----HRNLVRLQGWC-----HEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHRSKIL 483
H N+VRL C + ++ LV++ + + L L +A P LP ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 484 LGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG 543
L +LH C ++HRD+K NI++ G +L DFGLAR + + V
Sbjct: 119 RQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-- 173
Query: 544 TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI---EKEITGVGKV 591
T+ Y APE LL D++S G + E+ R+P+ E +GK+
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKI 223
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 123 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 78 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---R 133
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 193
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 194 ASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 79 LIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---R 134
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 194
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 195 ASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 121 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 121 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 176
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 177
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 9/207 (4%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN----SQGKDEFLSELSIIGTLRH 435
K + R +G G F Y+ ++ A K + K++ +E++I +L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++V G+ + + +V ++ SL + L + R + P + + YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
N+VIHRD+K N+ L++ + ++GDFGLA ++E D + GT Y+APE L
Sbjct: 161 ---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL-CGTPNYIAPEVLCK 216
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPIE 582
+ + D++S G ++ + G+ P E
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 125 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 123
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 124 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 80 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 137
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 14/222 (6%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKD--EFL 424
PK+ Y EL K + + IG G F V G+++A+K N+ G D
Sbjct: 2 PKD--YDEL---LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIK 56
Query: 425 SELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILL 484
+E+ + LRH+++ +L +I +V + P G L + ++ L +
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYII-SQDRLSEEETRVVFR 115
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT 544
+ SA+AY+H + HRD+K N++ DE +L DFGL + + +K G+
Sbjct: 116 QIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGS 172
Query: 545 MGYLAPEYLLTGRAT--EKTDVFSYGAVVLEVASGRRPIEKE 584
+ Y APE L+ G++ + DV+S G ++ + G P + +
Sbjct: 173 LAYAAPE-LIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 101 YSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRD 157
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ A GT Y++PE L + ++D++
Sbjct: 158 VKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPERLQGTHYSVQSDIW 214
Query: 566 SYGAVVLEVASGRRPI 581
S G ++E+A GR PI
Sbjct: 215 SMGLSLVEMAVGRYPI 230
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 125
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 126 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLG 181
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 125
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 126 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 181
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 123 -HRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 125 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 34/283 (12%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN----SQGKDEFLSELSIIGTLRH 435
K + R +G G F Y+ ++ A K + K++ +E++I +L +
Sbjct: 42 KRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN 101
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++V G+ + + +V ++ SL + L + R + P + + YLH
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHN 160
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
N+VIHRD+K N+ L++ + ++GDFGLA ++E D + GT Y+APE L
Sbjct: 161 ---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL-CGTPNYIAPEVLCK 216
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAAD 615
+ + D++S G ++ + G+ P E + + N +S+ R + +
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN----EYSVPRHINPVAS-- 270
Query: 616 ARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGE 658
A +RR+L H DP RP+ V ++L E
Sbjct: 271 ---------ALIRRML-------HADPTLRPS---VAELLTDE 294
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 361 SDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNS 417
D MP S R+ + R IG G FG V++GI P+N + +A+K C + +
Sbjct: 374 EDTYTMP---STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT 430
Query: 418 QG--KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLP 475
+++FL E + H ++V+L G E + ++ +L G L L + L
Sbjct: 431 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLD 489
Query: 476 WPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
+++ALAYL + + +HRD+ N+++ +LGDFGL+R +E
Sbjct: 490 LASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546
Query: 536 PDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEV-ASGRRPIE 582
A+ + ++APE + R T +DV+ +G + E+ G +P +
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 123
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 124 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 134/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ + G+L + L R P + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E R+ DFGLAR + + D
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 123
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 124 -HRVLHRDLKPENLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 179
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 122
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 123 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 178
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 124/279 (44%), Gaps = 40/279 (14%)
Query: 386 RIIGHGAFGTVYKGILPQNGDI---IAVK--RCSHNSQGK-DEFLSELSIIGTLRHRNLV 439
+I+G G FG+V +G L Q +AVK + ++SQ + +EFLSE + + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 440 RLQGWCHEKG-----EILLVYDLMPNGSLDKALFEAR-----SPLPWPHRSKILLGVASA 489
RL G C E + +++ M G L L +R +P K ++ +A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYL 548
+ YL +HRD+ N ML + + DFGL++++ D +A + ++
Sbjct: 160 MEYLSN---RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREG 608
A E L T K+DV+++G + E+A+ G+ N + + LH G
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT---------RGMTPYPGVQNHEMYDYLLH--G 265
Query: 609 RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPT 647
L + L+ ++ + +C DPL RPT
Sbjct: 266 HRLKQPEDCLDELYE---------IMYSCWRTDPLDRPT 295
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 15/224 (6%)
Query: 36 FDFGTLTLASLKLLGDAHMNNGSVRLTR--DVTVPYDGA-GKALYSKPVRFRLPGTHTPA 92
F F S L GDA +++G ++LT+ + +P + G+A YS P++ T A
Sbjct: 6 FSFKNFNSPSFILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKSTGAVA 65
Query: 93 XXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFD 150
I+ + +S G+AF + P G + GG LG+ D VAVEFD
Sbjct: 66 SWATSFTVKISAPSKASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSAQTVAVEFD 125
Query: 151 TLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISV 210
TL + + D + H+G+D+NS+ S + T++ DL +G+ I Y+ T S+
Sbjct: 126 TLSNSGW-DPSMKHIGIDVNSIKS-----IATVSWDLANGENAEILITYNAATSLLVASL 179
Query: 211 SYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST---QGSTEIH 251
+ + + ILS +D+ + +++ VGFS +T +G E H
Sbjct: 180 VHPSRRTSY-ILSERVDITNELPEYVSVGFSATTGLSEGYIETH 222
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 386 RIIGHGAFGTVYKGIL-------PQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHR----------SKILL 484
+N++ L G C + G + ++ + G+L + L R P L + + SK L+
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 485 G----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDAT 539
VA + YL + IHRD+ N+++ E ++ DFGLAR + H D T
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVE 599
+ ++APE L T ++DV+S+G ++ E+ + + G GV VE
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---VE 300
Query: 600 WVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 301 ELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 8/195 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
+G G G V+K +G ++A K +++ + EL ++ +V G
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ GEI + + M GSLD+ L +A +P K+ + V L YL ++ ++++HRD
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREK--HKIMHRD 133
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
VK SNI+++ +L DFG++ Q+ + A GT Y++PE L + ++D++
Sbjct: 134 VKPSNILVNSRGEIKLCDFGVSGQLIDEM---ANEFVGTRSYMSPERLQGTHYSVQSDIW 190
Query: 566 SYGAVVLEVASGRRP 580
S G ++E+A GR P
Sbjct: 191 SMGLSLVEMAVGRYP 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP----------LPWPHRS-KILL 484
+N++ L G C + G + ++ + G+L + L R P +P + K L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 485 G----VASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 32 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + + I A + YLH + +IHR
Sbjct: 89 S-TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDATVAAGTMGYLAPEYLLTGRATE--- 560
D+K++NI L E ++GDFGLA + S +G++ ++APE + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 561 KTDVFSYGAVVLEVASGRRP 580
++DV+++G V+ E+ +G+ P
Sbjct: 205 QSDVYAFGIVLYELMTGQLP 224
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
IG G+FG VYKGI +++A+K ++ E++++ + R G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 446 HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRD 505
+ ++ ++ + + GS L PL + + IL + L YLH E + IHRD
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSE---RKIHRD 141
Query: 506 VKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVF 565
+K +N++L E + +L DFG+A Q+ D GT ++APE + K D++
Sbjct: 142 IKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIW 200
Query: 566 SYGAVVLEVASGRRP 580
S G +E+A G P
Sbjct: 201 SLGITAIELAKGEPP 215
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 138/298 (46%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP----------LPWPHRS-KILL 484
+N++ L G C + G + ++ + G+L + L R P +P + K L+
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 485 G----VASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 386 RIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
R IG G FG V++GI P+N + +A+K C + + +++FL E + H ++V+
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G E + ++ +L G L L + L +++ALAYL + +
Sbjct: 76 LIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
+HRD+ N+++ +LGDFGL+R +E A+ + ++APE + R T
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 191
Query: 561 KTDVFSYGAVVLEV-ASGRRPIE 582
+DV+ +G + E+ G +P +
Sbjct: 192 ASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRC---SHNSQGKDEFLS---ELSIIGTLRHRNLV 439
+++G G FGTV+KG+ G+ I + C + G+ F + + IG+L H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG----VASALAYLHQ 495
RL G C + LV +P GSL + + R L ++LL +A + YL
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGAL----GPQLLLNWGVQIAKGMYYLE- 132
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
E+ ++HR++ N++L ++ DFG+A + DK + A + ++A E +
Sbjct: 133 --EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 555 TGRATEKTDVFSYGAVVLEVAS 576
G+ T ++DV+SYG V E+ +
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMT 212
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ + G+L + L R P + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D +
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 130/301 (43%), Gaps = 58/301 (19%)
Query: 386 RIIGHGAFG-----TVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTL-RHRN 437
+ +G GAFG T Y I +AVK + S + ++ +SEL ++ L H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG------------ 485
+V L G C G L++ + G L L R S ++
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 486 -----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
VA +A+L + IHRD+ NI+L G ++ DFGLAR +++D + V
Sbjct: 149 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN---YV 202
Query: 541 AAGT----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVAS 595
G + ++APE + T ++DV+SYG + E+ S G P + V S
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 255
Query: 596 NLVEWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQM 654
+ + +EG R+L+ A AEM ++ C DPL RPT + +VQ+
Sbjct: 256 KFYKMI----KEGFRMLSPEHA-------PAEMYDIMKT---CWDADPLKRPTFKQIVQL 301
Query: 655 L 655
+
Sbjct: 302 I 302
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 20 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + + I A + YLH + +IHR
Sbjct: 77 S-TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 132
Query: 505 DVKTSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATE--- 560
D+K++NI L E ++GDFGLA + S +G++ ++APE + +
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 561 KTDVFSYGAVVLEVASGRRP 580
++DV+++G V+ E+ +G+ P
Sbjct: 193 QSDVYAFGIVLYELMTGQLP 212
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 13/228 (5%)
Query: 361 SDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGIL--PQNGDI-IAVKRCSHNS 417
D MP S R+ + R IG G FG V++GI P+N + +A+K C + +
Sbjct: 374 EDTYTMP---STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT 430
Query: 418 QG--KDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLP 475
+++FL E + H ++V+L G E + ++ +L G L L + L
Sbjct: 431 SDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLD 489
Query: 476 WPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
+++ALAYL + + +HRD+ N+++ +LGDFGL+R +E
Sbjct: 490 LASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTY 546
Query: 536 PDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEV-ASGRRPIE 582
A+ + ++APE + R T +DV+ +G + E+ G +P +
Sbjct: 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + L++ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
++V+HRD+K N++++ +L DFGLAR T T+ Y APE LL +
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCK 179
Query: 558 -ATEKTDVFSYGAVVLEVASGR 578
+ D++S G + E+ + R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 12/203 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L H + ++ LV++ + A + +P P L + LA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS--- 124
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLTG 556
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 557 R-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 116/236 (49%), Gaps = 22/236 (9%)
Query: 353 VKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK- 411
++ E+ ++R+ KE +++++ ++ GAFGTVYKG+ G+ + +
Sbjct: 5 IRSGEAPNQALLRILKETEFKKIK----------VLSSGAFGTVYKGLWIPEGEKVKIPV 54
Query: 412 -----RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKA 466
R + + + E L E ++ ++ + ++ RL G C + L+ LMP G L
Sbjct: 55 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDY 113
Query: 467 LFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGL 526
+ E + + + + +A + YL + +++HRD+ N+++ + ++ DFGL
Sbjct: 114 VREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL 170
Query: 527 ARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
A+ + +K A + ++A E +L T ++DV+SYG V E+ + G +P
Sbjct: 171 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG G+ G V +G +AVK Q + E L +E+ I+ +H N+V +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ ++ + + G+L + + R L + + V ALAYLH + VIHRD+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQG---VIHRDI 167
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ +I+L +L DFG Q+ D P GT ++APE + + D++S
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKD-VPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 567 YGAVVLEVASGRRP 580
G +V+E+ G P
Sbjct: 227 LGIMVIEMVDGEPP 240
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 130/301 (43%), Gaps = 58/301 (19%)
Query: 386 RIIGHGAFG-----TVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTL-RHRN 437
+ +G GAFG T Y I +AVK + S + ++ +SEL ++ L H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG------------ 485
+V L G C G L++ + G L L R S ++
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 486 -----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
VA +A+L + IHRD+ NI+L G ++ DFGLAR +++D + V
Sbjct: 167 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN---YV 220
Query: 541 AAGT----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVAS 595
G + ++APE + T ++DV+SYG + E+ S G P + V S
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 273
Query: 596 NLVEWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQM 654
+ + +EG R+L+ A AEM ++ C DPL RPT + +VQ+
Sbjct: 274 KFYKMI----KEGFRMLSPEHA-------PAEMYDIM---KTCWDADPLKRPTFKQIVQL 319
Query: 655 L 655
+
Sbjct: 320 I 320
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 119/257 (46%), Gaps = 33/257 (12%)
Query: 346 FSKRYKHVKKSESFTSDIIRMPKEFSYRELRSATKC-FNANRIIGHGAFGTVYK----GI 400
+ R+K ++ E + I P + Y E + + +G GAFG V + G+
Sbjct: 12 YQVRWKIIESYEGNSYTFID-PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 401 LPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTL-RHRNLVRLQGWCHEKGEILLVYD 456
++ + +AVK + + ++ K+ +SEL I+ L +H N+V L G C G +L++ +
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 457 LMPNGSL-------------DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
G L D A A S L VA +A+L IH
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFL---ASKNCIH 187
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT----MGYLAPEYLLTGRAT 559
RDV N++L G A++GDFGLAR + +D + + G + ++APE + T
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCVYT 244
Query: 560 EKTDVFSYGAVVLEVAS 576
++DV+SYG ++ E+ S
Sbjct: 245 VQSDVWSYGILLWEIFS 261
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 35/215 (16%)
Query: 387 IIGHGAFGTVYKGILPQNGDII--AVKRCSHNSQGKD--EFLSELSIIGTL-RHRNLVRL 441
+IG G FG V K + ++G + A+KR + D +F EL ++ L H N++ L
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEAR---------------SPLPWPHRSKILLGV 486
G C +G + L + P+G+L L ++R S L V
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 487 ASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
A + YL Q+ Q IHR++ NI++ E + A++ DFGL+R E TMG
Sbjct: 149 ARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQE-------VYVKKTMG 198
Query: 547 -----YLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
++A E L T +DV+SYG ++ E+ S
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 16 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 73 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 505 DVKTSNIMLDEGFNARLGDFGLA-RQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 185
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 130/301 (43%), Gaps = 58/301 (19%)
Query: 386 RIIGHGAFG-----TVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTL-RHRN 437
+ +G GAFG T Y I +AVK + S + ++ +SEL ++ L H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG------------ 485
+V L G C G L++ + G L L R S ++
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 486 -----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
VA +A+L + IHRD+ NI+L G ++ DFGLAR +++D + V
Sbjct: 165 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN---YV 218
Query: 541 AAGT----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVAS 595
G + ++APE + T ++DV+SYG + E+ S G P + V S
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 271
Query: 596 NLVEWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQM 654
+ + +EG R+L+ A AEM ++ C DPL RPT + +VQ+
Sbjct: 272 KFYKMI----KEGFRMLSPEHA-------PAEMYDIMKT---CWDADPLKRPTFKQIVQL 317
Query: 655 L 655
+
Sbjct: 318 I 318
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 130/301 (43%), Gaps = 58/301 (19%)
Query: 386 RIIGHGAFG-----TVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTL-RHRN 437
+ +G GAFG T Y I +AVK + S + ++ +SEL ++ L H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG------------ 485
+V L G C G L++ + G L L R S ++
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 486 -----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
VA +A+L + IHRD+ NI+L G ++ DFGLAR +++D + V
Sbjct: 172 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN---YV 225
Query: 541 AAGT----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVAS 595
G + ++APE + T ++DV+SYG + E+ S G P + V S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 278
Query: 596 NLVEWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQM 654
+ + +EG R+L+ A AEM ++ C DPL RPT + +VQ+
Sbjct: 279 KFYKMI----KEGFRMLSPEHA-------PAEMYDIMKT---CWDADPLKRPTFKQIVQL 324
Query: 655 L 655
+
Sbjct: 325 I 325
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 116/236 (49%), Gaps = 22/236 (9%)
Query: 353 VKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK- 411
++ E+ ++R+ KE +++++ ++ GAFGTVYKG+ G+ + +
Sbjct: 5 IRSGEAPNQALLRILKETEFKKIK----------VLSSGAFGTVYKGLWIPEGEKVKIPV 54
Query: 412 -----RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKA 466
R + + + E L E ++ ++ + ++ RL G C + L+ LMP G L
Sbjct: 55 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDY 113
Query: 467 LFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGL 526
+ E + + + + +A + YL + +++HRD+ N+++ + ++ DFGL
Sbjct: 114 VREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGL 170
Query: 527 ARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
A+ + +K A + ++A E +L T ++DV+SYG V E+ + G +P
Sbjct: 171 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 107/205 (52%), Gaps = 15/205 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR--CSHNSQGKDEFLSELSI-IGTLRHRNLVRLQGW 444
+G GA+G V K +G I+AVKR + NSQ + L +L I + T+ V G
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 445 CHEKGEILLVYDLMPNGSLDK---ALFEARSPLPWPHRSKILLGVASALAYLHQECENQV 501
+G++ + +LM + SLDK + + +P KI + + AL +LH + V
Sbjct: 119 LFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--V 175
Query: 502 IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL---LTGRA 558
IHRDVK SN++++ ++ DFG++ + S T+ AG Y+APE + L +
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINPELNQKG 233
Query: 559 -TEKTDVFSYGAVVLEVASGRRPIE 582
+ K+D++S G ++E+A R P +
Sbjct: 234 YSVKSDIWSLGITMIELAILRFPYD 258
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 18 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 75 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 130
Query: 505 DVKTSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 187
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 130/301 (43%), Gaps = 58/301 (19%)
Query: 386 RIIGHGAFG-----TVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTL-RHRN 437
+ +G GAFG T Y I +AVK + S + ++ +SEL ++ L H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG------------ 485
+V L G C G L++ + G L L R S ++
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 486 -----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
VA +A+L + IHRD+ NI+L G ++ DFGLAR +++D + V
Sbjct: 172 SFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN---YV 225
Query: 541 AAGT----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVAS 595
G + ++APE + T ++DV+SYG + E+ S G P + V S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GMPVDS 278
Query: 596 NLVEWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQM 654
+ + +EG R+L+ A AEM ++ C DPL RPT + +VQ+
Sbjct: 279 KFYKMI----KEGFRMLSPEHA-------PAEMYDIMKT---CWDADPLKRPTFKQIVQL 324
Query: 655 L 655
+
Sbjct: 325 I 325
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 386 RIIGHGAFGTV-------YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHR----------SKILL 484
+N++ L G C + G + ++ + G+L + L R P L + + SK L+
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 485 G----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDAT 539
VA + YL + IHRD+ N+++ E ++ DFGLAR + H D T
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVE 599
+ ++APE L T ++DV+S+G ++ E+ + + G GV VE
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---VE 248
Query: 600 WVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 249 ELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 29/253 (11%)
Query: 346 FSKRYKHVKKSESFTSDIIRMPKEFSYRELRSATKC-FNANRIIGHGAFGTVYK----GI 400
+ R+K ++ E + I P + Y E + + +G GAFG V + G+
Sbjct: 4 YQVRWKIIESYEGNSYTFID-PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 62
Query: 401 LPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTL-RHRNLVRLQGWCHEKGEILLVYD 456
++ + +AVK + + ++ K+ +SEL I+ L +H N+V L G C G +L++ +
Sbjct: 63 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 457 LMPNGSL-------DKALFEARSPLPWPHRSKILLG--VASALAYLHQECENQVIHRDVK 507
G L +A + P R + VA +A+L IHRDV
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 179
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT----MGYLAPEYLLTGRATEKTD 563
N++L G A++GDFGLAR + +D + + G + ++APE + T ++D
Sbjct: 180 ARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCVYTVQSD 236
Query: 564 VFSYGAVVLEVAS 576
V+SYG ++ E+ S
Sbjct: 237 VWSYGILLWEIFS 249
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 386 RIIGHGAFGTV-------YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHR----------SKILL 484
+N++ L G C + G + ++ + G+L + L R P L + + SK L+
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 485 G----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDAT 539
VA + YL + IHRD+ N+++ E ++ DFGLAR + H D T
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVE 599
+ ++APE L T ++DV+S+G ++ E+ + + G GV VE
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---VE 252
Query: 600 WVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 253 ELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 16 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 73 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 505 DVKTSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 185
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 386 RIIGHGAFGTV-------YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHR----------SKILL 484
+N++ L G C + G + ++ + G+L + L R P L + + SK L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 485 G----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDAT 539
VA + YL + IHRD+ N+++ E ++ DFGLAR + H D T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVE 599
+ ++APE L T ++DV+S+G ++ E+ + + G GV VE
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---VE 259
Query: 600 WVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 116/236 (49%), Gaps = 22/236 (9%)
Query: 353 VKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK- 411
++ E+ ++R+ KE +++++ ++G GAFGTVYKG+ G+ + +
Sbjct: 5 IRSGEAPNQALLRILKETEFKKIK----------VLGSGAFGTVYKGLWIPEGEKVKIPV 54
Query: 412 -----RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKA 466
R + + + E L E ++ ++ + ++ RL G C + L+ LMP G L
Sbjct: 55 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDY 113
Query: 467 LFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGL 526
+ E + + + + +A + YL + +++HRD+ N+++ + ++ DFG
Sbjct: 114 VREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGR 170
Query: 527 ARQV-EHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
A+ + +K A + ++A E +L T ++DV+SYG V E+ + G +P
Sbjct: 171 AKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 21 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 78 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 505 DVKTSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 190
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 386 RIIGHGAFGTV-------YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHR----------SKILL 484
+N++ L G C + G + ++ + G+L + L R P L + + SK L+
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 485 G----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDAT 539
VA + YL + IHRD+ N+++ E ++ DFGLAR + H D T
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVE 599
+ ++APE L T ++DV+S+G ++ E+ + + G GV VE
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---VE 251
Query: 600 WVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 252 ELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 36 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 93 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 148
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 149 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 205
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 206 YSFQSDVYAFGIVLYELMTGQLP 228
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 45 SLKLLGDAHMNNGSVRL--TRDVTVPYD-GAGKALYSKPVRFRLPGTHTPAXXXXXXXX- 100
S+ GDA+ G+++L T P AG+ALYS PV+ T + A
Sbjct: 19 SIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFF 78
Query: 101 -XITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGL----GFVAVEFDTLMDV 155
IT P+ GLAF + P V AG LGL ++ A VAVEFDT +
Sbjct: 79 LKITGNGPAD---GLAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNP 135
Query: 156 EFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNL 215
F + + H+G+++NS+VS + + D+ SG + + I YDG + +SY +
Sbjct: 136 NFPEPSYRHIGINVNSIVSVATKRWE--DSDIFSGKIATARISYDGSAEILTVVLSYPDG 193
Query: 216 KPKVPILSFTLDLDQYVNDFMYVGFSGST 244
ILS ++D+ Q + + + VG S ST
Sbjct: 194 SDY--ILSHSVDMRQNLPESVRVGISAST 220
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 21 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 78 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 133
Query: 505 DVKTSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 190
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 134/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ + G+L + L R P + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 44 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 101 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 213
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLP 236
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN----SQGKDEFLSE---LSIIGTLR 434
F+ +RIIG G FG VY G + A+K QG+ L+E LS++ T
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE----ARSPLPWPHRSKILLGVASAL 490
+V + H ++ + DLM G L L + + + + + + ++I+LG L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG----L 305
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
++H V++RD+K +NI+LDE + R+ D GLA K P A+V GT GY+AP
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS-KKKPHASV--GTHGYMAP 359
Query: 551 EYLLTGRATEKT-DVFSYGAVVLEVASGRRPIEKEIT 586
E L G A + + D FS G ++ ++ G P + T
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN----SQGKDEFLSE---LSIIGTLR 434
F+ +RIIG G FG VY G + A+K QG+ L+E LS++ T
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE----ARSPLPWPHRSKILLGVASAL 490
+V + H ++ + DLM G L L + + + + + + ++I+LG L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG----L 305
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
++H V++RD+K +NI+LDE + R+ D GLA K P A+V GT GY+AP
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS-KKKPHASV--GTHGYMAP 359
Query: 551 EYLLTGRATEKT-DVFSYGAVVLEVASGRRPIEKEIT 586
E L G A + + D FS G ++ ++ G P + T
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 7/225 (3%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFL-SELSIIGTLRHRNLVRLQGWCH 446
IG G+ G V G +AVK+ Q + E L +E+ I+ H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 447 EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDV 506
E+ +V + + G+L + R + + + L V AL+YLH + VIHRD+
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLHNQG---VIHRDI 167
Query: 507 KTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFS 566
K+ +I+L +L DFG QV + P GT ++APE + + D++S
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKE-VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 567 YGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLL 611
G +V+E+ G P E + +L V LH+ +L
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVL 271
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN----SQGKDEFLSE---LSIIGTLR 434
F+ +RIIG G FG VY G + A+K QG+ L+E LS++ T
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE----ARSPLPWPHRSKILLGVASAL 490
+V + H ++ + DLM G L L + + + + + + ++I+LG L
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG----L 304
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
++H V++RD+K +NI+LDE + R+ D GLA K P A+V GT GY+AP
Sbjct: 305 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS-KKKPHASV--GTHGYMAP 358
Query: 551 EYLLTGRATEKT-DVFSYGAVVLEVASGRRPIEKEIT 586
E L G A + + D FS G ++ ++ G P + T
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 45 SLKLLGDAHMNNGSVRL--TRDVTVPYD-GAGKALYSKPVRFRLPGTHTPAXXXXXXXX- 100
S+ GDA+ G+++L T P AG+ALYS PV+ T + A
Sbjct: 19 SIIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFF 78
Query: 101 -XITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGL----GFVAVEFDTLMDV 155
IT P+ GLAF + P V AG LGL ++ A VAVEFDT +
Sbjct: 79 LKITGNGPAD---GLAFFLAPPDSDVKDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNP 135
Query: 156 EFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNL 215
F + + H+G+++NS+VS + + D+ SG + + I YDG + +SY +
Sbjct: 136 NFPEPSYRHIGINVNSIVSVATKRWE--DSDIFSGKIATARISYDGSAEILTVVLSYPDG 193
Query: 216 KPKVPILSFTLDLDQYVNDFMYVGFSGST 244
ILS ++D+ Q + + + VG S ST
Sbjct: 194 SDY--ILSHSVDMRQNLPESVRVGISAST 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 124
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLT 555
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 125 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYXHEVVTLWYRAPEILLG 180
Query: 556 GR-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 23/217 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHN----SQGKDEFLSE---LSIIGTLR 434
F+ +RIIG G FG VY G + A+K QG+ L+E LS++ T
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE----ARSPLPWPHRSKILLGVASAL 490
+V + H ++ + DLM G L L + + + + + + ++I+LG L
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILG----L 305
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
++H V++RD+K +NI+LDE + R+ D GLA K P A+V GT GY+AP
Sbjct: 306 EHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS-KKKPHASV--GTHGYMAP 359
Query: 551 EYLLTGRATEKT-DVFSYGAVVLEVASGRRPIEKEIT 586
E L G A + + D FS G ++ ++ G P + T
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 33/210 (15%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNLVRLQGW 444
IG G +GTV+K + +I+A+KR + + L E+ ++ L+H+N+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 445 CHEKGEILLVYDLMP----------NGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H ++ LV++ NG LD + ++ L + L + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKS-----------FLFQLLKGLGFCH 118
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG--TMGYLAPEY 552
V+HRD+K N++++ +L DFGLAR P +A T+ Y P+
Sbjct: 119 SR---NVLHRDLKPQNLLINRNGELKLADFGLARAF---GIPVRCYSAEVVTLWYRPPDV 172
Query: 553 LLTGR-ATEKTDVFSYGAVVLEVASGRRPI 581
L + + D++S G + E+A+ RP+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+ + +++ + + E+S++ L H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 121
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
++V+HRD+K N++++ +L DFGLAR T T+ Y APE LL +
Sbjct: 122 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCK 179
Query: 558 -ATEKTDVFSYGAVVLEVASGR 578
+ D++S G + E+ + R
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+ + +++ + + E+S++ L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKAL-FEARSPLPWPHRSKILLGVASALAYLHQEC 497
V+L H + ++ LV++ + + L K + A + +P P L + LA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS-- 120
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
++V+HRD+K N++++ +L DFGLAR T T+ Y APE LL +
Sbjct: 121 -HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYTHEVVTLWYRAPEILLGCK 178
Query: 558 -ATEKTDVFSYGAVVLEVASGR 578
+ D++S G + E+ + R
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 135/298 (45%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTV-------YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP--LPWPHR----------SKIL 483
+N++ L G C + G + ++ + G+L + +AR P L + + SK L
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNL-REYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 484 LG----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+ VA + YL + IHRD+ N+++ E ++ DFGLAR + H D
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G GV V
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---V 258
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 134/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ + G+L + L R P + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 386 RIIGHGAFGTV-------YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHR----------SKILL 484
+N++ L G C + G + ++ + G+L + L R P L + + SK L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 485 G----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDAT 539
VA + YL + IHRD+ N+++ E ++ DFGLAR + H D T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVE 599
+ ++APE L T ++DV+S+G ++ E+ + + G GV VE
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---VE 259
Query: 600 WVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 29/253 (11%)
Query: 346 FSKRYKHVKKSESFTSDIIRMPKEFSYRELRSATKC-FNANRIIGHGAFGTVYK----GI 400
+ R+K ++ E + I P + Y E + + +G GAFG V + G+
Sbjct: 12 YQVRWKIIESYEGNSYTFID-PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 401 LPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTL-RHRNLVRLQGWCHEKGEILLVYD 456
++ + +AVK + + ++ K+ +SEL I+ L +H N+V L G C G +L++ +
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 457 LMPNGSL-------DKALFEARSPLPWPHRSKILLG--VASALAYLHQECENQVIHRDVK 507
G L +A + P R + VA +A+L IHRDV
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVA 187
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT----MGYLAPEYLLTGRATEKTD 563
N++L G A++GDFGLAR + +D + + G + ++APE + T ++D
Sbjct: 188 ARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCVYTVQSD 244
Query: 564 VFSYGAVVLEVAS 576
V+SYG ++ E+ S
Sbjct: 245 VWSYGILLWEIFS 257
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 81 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 138
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFG A+ + +K A + ++A E +L
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 382 FNANRIIGHGAFGTVY---KGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G G+FG V+ K P +G + A+K + + + + E I+ + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG-VASALAYLH 494
+V+L +G++ L+ D + G L L ++ + K L +A L +LH
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ-VEHDKSPDATVAAGTMGYLAPEYL 553
+I+RD+K NI+LDE + +L DFGL+++ ++H+K A GT+ Y+APE +
Sbjct: 148 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK--AYSFCGTVEYMAPEVV 202
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
+ D +SYG ++ E+ +G P +
Sbjct: 203 NRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 372 YRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSI 429
Y + + F IG G+FG V+KGI + ++A+K ++ E+++
Sbjct: 19 YFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITV 78
Query: 430 IGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGS-LDKALFEARSPLPWPHRSKILLGVAS 488
+ + + G + ++ ++ + + GS LD L E PL + IL +
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP-GPLDETQIATILREILK 135
Query: 489 ALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYL 548
L YLH E + IHRD+K +N++L E +L DFG+A Q+ D GT ++
Sbjct: 136 GLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWM 191
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
APE + K D++S G +E+A G P
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 386 RIIGHGAFGTV-------YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHR----------SKILL 484
+N++ L G C + G + ++ + G+L + L R P L + + SK L+
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 485 G----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDAT 539
VA + YL + IHRD+ N+++ E ++ DFGLAR + H D T
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVE 599
+ ++APE L T ++DV+S+G ++ E+ + + G GV VE
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---VE 244
Query: 600 WVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 245 ELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFG A+ + +K A + ++A E +L
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 13/213 (6%)
Query: 380 KCFNANRIIGHGAFGTVY---KGILPQNGDIIAVKRCS-----HNSQGKDEFLSELSIIG 431
+CF R++G G +G V+ K G I A+K N++ +E +I+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 432 TLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALA 491
++H +V L G++ L+ + + G L L E L ++ AL
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACFYLAEISMALG 135
Query: 492 YLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPE 551
+LHQ+ +I+RD+K NIML+ + +L DFGL ++ HD + T GT+ Y+APE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF-CGTIEYMAPE 191
Query: 552 YLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
L+ D +S GA++ ++ +G P E
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 386 RIIGHGAFGTV-------YKGILPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V P +AVK ++ KD + +SE+ ++ + +H
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPW-------PHR---SKILL 484
+N++ L G C + G + ++ + G+L + L R P L + P SK L+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 485 G----VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDAT 539
VA + YL + IHRD+ N+++ E ++ DFGLAR + H D T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 540 VAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVE 599
+ ++APE L T ++DV+S+G ++ E+ + + G GV VE
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--------LGGSPYPGVP---VE 259
Query: 600 WVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ ++ E + ++ C H P RPT + +V+ L
Sbjct: 260 ELFKLLKEGHRMDKPSNCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 79 PHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFG A+ + +K A + ++A E +L
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRPIE 582
T ++DV+SYG V E+ + G +P +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 18/198 (9%)
Query: 388 IGHGAFGTVYKGILPQN--GDIIAVK--RCSHNSQG-KDEFLSELSIIGTLRHRNLVRLQ 442
IG G +G VYK QN G+ A+K R +G + E+SI+ L+H N+V+L
Sbjct: 10 IGEGTYGVVYKA---QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
H K ++LV++ + + L K L L LL + + +AY H + +V+
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVL 122
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQ--VEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
HRD+K N++++ ++ DFGLAR + K V T+ Y AP+ L+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV---TLWYRAPDVLMGSKKYS 179
Query: 561 KT-DVFSYGAVVLEVASG 577
T D++S G + E+ +G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++ GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFGLA+ + +K A + ++A E +L
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 43 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 100 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 155
Query: 505 DVKTSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 156 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 212
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 213 YSFQSDVYAFGIVLYELMTGQLP 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 18/198 (9%)
Query: 388 IGHGAFGTVYKGILPQN--GDIIAVK--RCSHNSQG-KDEFLSELSIIGTLRHRNLVRLQ 442
IG G +G VYK QN G+ A+K R +G + E+SI+ L+H N+V+L
Sbjct: 10 IGEGTYGVVYKA---QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
H K ++LV++ + + L K L L LL + + +AY H + +V+
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVL 122
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQ--VEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
HRD+K N++++ ++ DFGLAR + K V T+ Y AP+ L+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV---TLWYRAPDVLMGSKKYS 179
Query: 561 KT-DVFSYGAVVLEVASG 577
T D++S G + E+ +G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 107/232 (46%), Gaps = 25/232 (10%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEF-LSELSIIGTLR 434
AT + IG GA+GTVYK P +G +A+K R + G +S + + LR
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 435 ------HRNLVRLQGWC-----HEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHRSKI 482
H N+VRL C + ++ LV++ + + L L +A P LP +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
+ L +LH C ++HRD+K NI++ G +L DFGLAR + + T
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPVV 180
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI---EKEITGVGKV 591
T+ Y APE LL D++S G + E+ R+P+ E +GK+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKI 231
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 46 LKLLGDAHM-NNGSVRLTRDVTVPYDGA------GKALYSKPVRFRLPGTHTPAXXXXXX 98
LK GDA + ++G+++LT+ V +G G+ALY+ P+ T A
Sbjct: 19 LKKQGDATVTSSGTLQLTK---VDKNGVPDPKSLGRALYASPINIWDSKTGVVASFATSF 75
Query: 99 XXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVE 156
I N ++I GLAF + P + G LGL D + VAVEFDT +
Sbjct: 76 RFTIYAPNIATIADGLAFFLAPVSSPPKAGAGFLGLFDSAVFNSSYQTVAVEFDTYENTV 135
Query: 157 FSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLK 216
F D H+G+D+NS+ S + T+ DL +G+ I YD + ++ Y + K
Sbjct: 136 FLDPPDTHIGIDVNSIKS-----IKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSK 190
Query: 217 PKVPILSFTLDLDQYVNDFMYVGFS---GSTQGSTEIH 251
ILS +DL + +++ +GFS G++ G E H
Sbjct: 191 TSF-ILSDVVDLKSVLPEWVSIGFSAATGASSGYIETH 227
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 44 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K ++ +V SL L + I A + YLH + +IHR
Sbjct: 101 S-TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 156
Query: 505 DVKTSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 157 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 213
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 214 YSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 133/276 (48%), Gaps = 40/276 (14%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFLSELSIIGTLRHRNLV 439
+ +G G+FG V G +A+K + + QG+ E E+S + LRH +++
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 77
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+L K EI++V + N D + R + + + SA+ Y H+ +
Sbjct: 78 KLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHR---H 132
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR-- 557
+++HRD+K N++LDE N ++ DFGL+ + D + T + G+ Y APE +++G+
Sbjct: 133 KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAPE-VISGKLY 189
Query: 558 ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADAR 617
A + DV+S G ++ + R P + E V + N+ V++L + L+ A
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFKNISNGVYTL---PKFLSPGAAG 242
Query: 618 LEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQ 653
L ++R+L+V +PL R ++ ++Q
Sbjct: 243 L--------IKRMLIV-------NPLNRISIHEIMQ 263
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 104/209 (49%), Gaps = 12/209 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 79 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 136
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFG A+ + +K A + ++A E +L
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRPIE 582
T ++DV+SYG V E+ + G +P +
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 133/276 (48%), Gaps = 40/276 (14%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFLSELSIIGTLRHRNLV 439
+ +G G+FG V G +A+K + + QG+ E E+S + LRH +++
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHII 76
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+L K EI++V + N D + R + + + SA+ Y H+ +
Sbjct: 77 KLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHR---H 131
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR-- 557
+++HRD+K N++LDE N ++ DFGL+ + D + T + G+ Y APE +++G+
Sbjct: 132 KIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAPE-VISGKLY 188
Query: 558 ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADAR 617
A + DV+S G ++ + R P + E V + N+ V++L + L+ A
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFKNISNGVYTL---PKFLSPGAAG 241
Query: 618 LEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQ 653
L ++R+L+V +PL R ++ ++Q
Sbjct: 242 L--------IKRMLIV-------NPLNRISIHEIMQ 262
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 134/280 (47%), Gaps = 40/280 (14%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFLSELSIIGTLRH 435
+ + +G G+FG V G +A+K + + QG+ E E+S + LRH
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 63
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++++L K EI++V + N D + R + + + SA+ Y H+
Sbjct: 64 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
++++HRD+K N++LDE N ++ DFGL+ + D + T + G+ Y APE +++
Sbjct: 122 ---HKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAPE-VIS 175
Query: 556 GR--ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTA 613
G+ A + DV+S G ++ + R P + E V + N+ V++L + L+
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFKNISNGVYTL---PKFLSP 228
Query: 614 ADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQ 653
A L ++R+L+V +PL R ++ ++Q
Sbjct: 229 GAAGL--------IKRMLIV-------NPLNRISIHEIMQ 253
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 12/207 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
F +++G GAFGTVYKG+ G+ + + R + + + E L E ++ ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++ RL G C + L+ LMP G L + E + + + + +A + YL
Sbjct: 77 PHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE- 134
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAGTMGYLAPEYLL 554
+ +++HRD+ N+++ + ++ DFG A+ + +K A + ++A E +L
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 555 TGRATEKTDVFSYGAVVLEVAS-GRRP 580
T ++DV+SYG V E+ + G +P
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 46 LKLLGDAHM-NNGSVRLTRDVTVPYDGA------GKALYSKPVRFRLPGTHTPAXXXXXX 98
LK GDA + ++G+++LT+ V +G G+ALY+ P+ T A
Sbjct: 19 LKKQGDATVTSSGTLQLTK---VDKNGVPDPKSLGRALYASPINIWDSKTGVVASFATSF 75
Query: 99 XXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVE 156
I N ++I GLAF + P + G LGL D + VAVEFDT +
Sbjct: 76 RFTIYAPNIATIADGLAFFLAPVSSPPKAGAGFLGLFDSAVFNSSYQTVAVEFDTYENTV 135
Query: 157 FSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLK 216
F D H+G+D+NS+ S + T+ DL +G+ I YD + ++ Y + K
Sbjct: 136 FLDPPDTHIGIDVNSIKS-----IKTVKWDLANGEAAKVLITYDSSAKLLVAALVYPSSK 190
Query: 217 PKVPILSFTLDLDQYVNDFMYVGFS---GSTQGSTEIH 251
ILS +DL + +++ +GFS G++ G E H
Sbjct: 191 TSF-ILSDVVDLKSVLPEWVSIGFSAATGASSGYIETH 227
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 99/198 (50%), Gaps = 18/198 (9%)
Query: 388 IGHGAFGTVYKGILPQN--GDIIAVK--RCSHNSQG-KDEFLSELSIIGTLRHRNLVRLQ 442
IG G +G VYK QN G+ A+K R +G + E+SI+ L+H N+V+L
Sbjct: 10 IGEGTYGVVYKA---QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
H K ++LV++ + + L K L L LL + + +AY H + +V+
Sbjct: 67 DVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVL 122
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQ--VEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
HRD+K N++++ ++ DFGLAR + K V T+ Y AP+ L+ +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV---TLWYRAPDVLMGSKKYS 179
Query: 561 KT-DVFSYGAVVLEVASG 577
T D++S G + E+ +G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 12/203 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNL 438
F IG G +G VYK G+++A+K+ +++ + + E+S++ L H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L H + ++ LV++ + A + +P P L + LA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS--- 120
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--AGTMGYLAPEYLLTG 556
++V+HRD+K N++++ +L DFGLAR P T T+ Y APE LL
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGC 177
Query: 557 R-ATEKTDVFSYGAVVLEVASGR 578
+ + D++S G + E+ + R
Sbjct: 178 KYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 134/280 (47%), Gaps = 40/280 (14%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFLSELSIIGTLRH 435
+ + +G G+FG V G +A+K + + QG+ E E+S + LRH
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRH 67
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
++++L K EI++V + N D + R + + + SA+ Y H+
Sbjct: 68 PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 496 ECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
++++HRD+K N++LDE N ++ DFGL+ + D + T + G+ Y APE +++
Sbjct: 126 ---HKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAPE-VIS 179
Query: 556 GR--ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTA 613
G+ A + DV+S G ++ + R P + E V + N+ V++L + L+
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV----LFKNISNGVYTL---PKFLSP 232
Query: 614 ADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQ 653
A L ++R+L+V +PL R ++ ++Q
Sbjct: 233 GAAGL--------IKRMLIV-------NPLNRISIHEIMQ 257
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 386 RIIGHGAFGTV----YKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
R +G G FG V Y G+++AVK + Q + + E+ I+ TL H +++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 440 RLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+ +G C ++GE + LV + +P GSL L P S +G+A L + Q C
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------PRHS---IGLAQLLLFAQQIC 127
Query: 498 E-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVE--HDKSPDATVAAGTMGYL 548
E IHR++ N++LD ++GDFGLA+ V H+ + +
Sbjct: 128 EGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEV 574
APE L + +DV+S+G + E+
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 29/206 (14%)
Query: 386 RIIGHGAFGTV----YKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
R +G G FG V Y G+++AVK + Q + + E+ I+ TL H +++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 440 RLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+ +G C ++GE + LV + +P GSL L P S +G+A L + Q C
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---------PRHS---IGLAQLLLFAQQIC 127
Query: 498 E-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVE--HDKSPDATVAAGTMGYL 548
E IHR++ N++LD ++GDFGLA+ V H+ + +
Sbjct: 128 EGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 187
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEV 574
APE L + +DV+S+G + E+
Sbjct: 188 APECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 11/184 (5%)
Query: 73 GKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSL 132
G+A YS P+ T A I N ++I GLAF + P S GG L
Sbjct: 49 GRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFL 108
Query: 133 GLLDEKGAGLGF--VAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSG 190
GL D +G + VAVEFDT + F+D H+G D+NS+ S + T+ L +G
Sbjct: 109 GLFDSAVSGSTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISS-----IKTVKWSLANG 163
Query: 191 DLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFS---GSTQGS 247
+ I Y+ + S+ Y + K IL+ +DL + +++ VGFS G++ G
Sbjct: 164 EAAKVLITYNSAVKLLVASLVYPSSKTSF-ILADIVDLSSVLPEWVRVGFSAATGASGGK 222
Query: 248 TEIH 251
E H
Sbjct: 223 IETH 226
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 53/296 (17%)
Query: 388 IGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RHRN 437
+G G FG V GI P+ +AVK ++ KD + +SE+ ++ + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP----------LPWPHRS-KILLG- 485
++ L G C + G + ++ + G+L + L R P +P + K L+
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 486 ---VASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDATV 540
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D T
Sbjct: 209 TYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 541 AAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEW 600
+ ++APE L T ++DV+S+G ++ E+ + + G G+ VE
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---VEE 313
Query: 601 VWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 314 LFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 359
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 133/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G G FG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ + G+L + L R P + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 148 SCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 252
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 253 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 133/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G G FG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ + G+L + L R P + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 150 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 254
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 255 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 302
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ G+L + L R P + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 133/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G G FG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ + G+L + L R P + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 153 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 257
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 258 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 305
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ F IG G+FG V+KGI + ++A+K ++ E++++
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGS-LDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+ + G + ++ ++ + + GS LD L E PL + IL + L YLH E
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP-GPLDETQIATILREILKGLDYLHSE 123
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+ IHRD+K +N++L E +L DFG+A Q+ D GT ++APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 557 RATEKTDVFSYGAVVLEVASGRRP 580
K D++S G +E+A G P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 14/200 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 32 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
++ +V SL L + + I A + YLH + +IHR
Sbjct: 89 S-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHR 144
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDATVAAGTMGYLAPEYLLTGRATE--- 560
D+K++NI L E ++GDFGLA + S +G++ ++APE + +
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 561 KTDVFSYGAVVLEVASGRRP 580
++DV+++G V+ E+ +G+ P
Sbjct: 205 QSDVYAFGIVLYELMTGQLP 224
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ KD + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ G+L + L R P + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 134/298 (44%), Gaps = 53/298 (17%)
Query: 386 RIIGHGAFGTVYK----GI---LPQNGDIIAVKRCSHNSQGKD--EFLSELSIIGTL-RH 435
+ +G GAFG V GI P+ +AVK ++ +D + +SE+ ++ + +H
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---------------LPWPHRS 480
+N++ L G C + G + ++ + G+L + L R P + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 481 KILLGVASALAYL-HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH-DKSPDA 538
+A + YL Q+C IHRD+ N+++ E ++ DFGLAR + + D
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 539 TVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLV 598
T + ++APE L T ++DV+S+G ++ E+ + + G G+ V
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--------LGGSPYPGIP---V 265
Query: 599 EWVWSLHREG-RLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
E ++ L +EG R+ A+ E + ++ C H P RPT + +V+ L
Sbjct: 266 EELFKLLKEGHRMDKPANCTNE----------LYMMMRDCWHAVPSQRPTFKQLVEDL 313
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ----GKDEFLSELSIIGTLRHRNLVRL 441
R++G G FG V+ + G + A K+ + G + E I+ + R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA---SALAYLHQECE 498
K ++ LV +M G + ++ P + + A S L +LHQ
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ--- 307
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N++LD+ N R+ D GLA +++ ++ AGT G++APE LL
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-AGTPGFMAPELLLGEEY 366
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
D F+ G + E+ + R P
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 118/257 (45%), Gaps = 33/257 (12%)
Query: 346 FSKRYKHVKKSESFTSDIIRMPKEFSYRELRSATKC-FNANRIIGHGAFGTVYK----GI 400
+ R+K ++ E + I P + Y E + + +G GAFG V + G+
Sbjct: 12 YQVRWKIIESYEGNSYTFID-PTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL 70
Query: 401 LPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTL-RHRNLVRLQGWCHEKGEILLVYD 456
++ + +AVK + + ++ K+ +SEL I+ L +H N+V L G C G +L++ +
Sbjct: 71 GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 457 LMPNGSL-------------DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
G L D A A S VA +A+L IH
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFL---ASKNCIH 187
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT----MGYLAPEYLLTGRAT 559
RDV N++L G A++GDFGLAR + +D + + G + ++APE + T
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSN---YIVKGNARLPVKWMAPESIFDCVYT 244
Query: 560 EKTDVFSYGAVVLEVAS 576
++DV+SYG ++ E+ S
Sbjct: 245 VQSDVWSYGILLWEIFS 261
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ----GKDEFLSELSIIGTLRHRNLVRL 441
R++G G FG V+ + G + A K+ + G + E I+ + R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA---SALAYLHQECE 498
K ++ LV +M G + ++ P + + A S L +LHQ
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ--- 307
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N++LD+ N R+ D GLA +++ ++ AGT G++APE LL
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-AGTPGFMAPELLLGEEY 366
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
D F+ G + E+ + R P
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 110/223 (49%), Gaps = 34/223 (15%)
Query: 385 NRIIGHGAFGTVY----KGILP-QNGDIIAVKRCSHNS-QGKDEFLSELSIIGTLRHRNL 438
R +G GAFG V+ + P ++ ++AVK + + +F E ++ L+H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPW------PHRSKILLG------- 485
V+ G C + +++V++ M +G L+K L A P P ++K LG
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFL-RAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 486 ---VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
+AS + YL +HRD+ T N ++ ++GDFG++R V S D
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV---YSTDYYRVG 192
Query: 543 G----TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
G + ++ PE ++ + T ++DV+S+G ++ E+ + G++P
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ F IG G+FG V+KGI + ++A+K ++ E++++
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGS-LDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+ + G + ++ ++ + + GS LD L E PL + IL + L YLH E
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP-GPLDETQIATILREILKGLDYLHSE 123
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+ IHRD+K +N++L E +L DFG+A Q+ D GT ++APE +
Sbjct: 124 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 557 RATEKTDVFSYGAVVLEVASGRRP 580
K D++S G +E+A G P
Sbjct: 180 AYDSKADIWSLGITAIELARGEPP 203
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ----GKDEFLSELSIIGTLRHRNLVRL 441
R++G G FG V+ + G + A K+ + G + E I+ + R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA---SALAYLHQECE 498
K ++ LV +M G + ++ P + + A S L +LHQ
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ--- 307
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N++LD+ N R+ D GLA +++ ++ AGT G++APE LL
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-AGTPGFMAPELLLGEEY 366
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
D F+ G + E+ + R P
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 11/203 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ----GKDEFLSELSIIGTLRHRNLVRL 441
R++G G FG V+ + G + A K+ + G + E I+ + R +V L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 442 QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA---SALAYLHQECE 498
K ++ LV +M G + ++ P + + A S L +LHQ
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ--- 307
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N++LD+ N R+ D GLA +++ ++ AGT G++APE LL
Sbjct: 308 RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY-AGTPGFMAPELLLGEEY 366
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
D F+ G + E+ + R P
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPF 389
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 10/204 (4%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ F IG G+FG V+KGI + ++A+K ++ E++++
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGS-LDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+ + G + ++ ++ + + GS LD L E PL + IL + L YLH E
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALD--LLEP-GPLDETQIATILREILKGLDYLHSE 138
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+ IHRD+K +N++L E +L DFG+A Q+ D GT ++APE +
Sbjct: 139 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 557 RATEKTDVFSYGAVVLEVASGRRP 580
K D++S G +E+A G P
Sbjct: 195 AYDSKADIWSLGITAIELARGEPP 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 15/216 (6%)
Query: 377 SATKCFNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQGKDEFLSELSIIG 431
S T + IG GAF V + + G II K+ S K E E I
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE--REARICR 58
Query: 432 TLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALA 491
L+H N+VRL E+G LV+DL+ G L + + AR S + + A+
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVL 117
Query: 492 YLHQECENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYL 548
+ HQ V+HRD+K N++L +G +L DFGLA +V+ D+ AGT GYL
Sbjct: 118 HCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGF-AGTPGYL 173
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
+PE L + D+++ G ++ + G P E
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDE 209
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNLVRLQGW 444
+G G +G VYK Q G I+A+KR +++ + + E+S++ L H N+V L
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
H + + LV++ M L K L E ++ L L + +A+ HQ ++++HR
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHR 143
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL-TGRATEKTD 563
D+K N++++ +L DFGLAR T T+ Y AP+ L+ + + + D
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 564 VFSYGAVVLEVASGR 578
++S G + E+ +G+
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 29/206 (14%)
Query: 386 RIIGHGAFGTV----YKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
R +G G FG V Y G+++AVK + Q + + E+ I+ TL H +++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 440 RLQGWCHEKG--EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+ +G C + G + LV + +P GSL L P S +G+A L + Q C
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYL---------PRHS---IGLAQLLLFAQQIC 144
Query: 498 E-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVE--HDKSPDATVAAGTMGYL 548
E IHRD+ N++LD ++GDFGLA+ V H+ + +
Sbjct: 145 EGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY 204
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEV 574
APE L + +DV+S+G + E+
Sbjct: 205 APECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNLVRLQGW 444
+G G +G VYK Q G I+A+KR +++ + + E+S++ L H N+V L
Sbjct: 29 VGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
H + + LV++ M L K L E ++ L L + +A+ HQ ++++HR
Sbjct: 88 IHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHR 143
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL-TGRATEKTD 563
D+K N++++ +L DFGLAR T T+ Y AP+ L+ + + + D
Sbjct: 144 DLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVD 202
Query: 564 VFSYGAVVLEVASGR 578
++S G + E+ +G+
Sbjct: 203 IWSIGCIFAEMITGK 217
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 386 RIIGHGAFGTVYKG----ILPQNG-DIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
+ +G G FG V K + + G +AVK N+ + + LSE +++ + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLP---------------WPHRSKIL 483
++L G C + G +LL+ + GSL L E+R P P +
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 484 LG--------VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDK 534
+G ++ + YL E +++HRD+ NI++ EG ++ DFGL+R V E D
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 535 SPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ + ++A E L T ++DV+S+G ++ E+ +
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 372 YRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKD-EFLSELSI 429
+++ ++ ++G GAF V + ++A+K + + +GK+ +E+++
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 430 IGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-----DKALFEARSPLPWPHRSKILL 484
+ ++H N+V L G + L+ L+ G L +K + R S+++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIF 123
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIM---LDEGFNARLGDFGLARQVEHDKSPDATVA 541
V A+ YLH + ++HRD+K N++ LDE + DFGL++ D + A
Sbjct: 124 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 542 AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
GT GY+APE L ++ D +S G + + G P E
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 98/198 (49%), Gaps = 15/198 (7%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQG 443
++G G++G V K G I+A+K+ + K + E+ ++ LRH NLV L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 444 WCHEKGEILLVYDLMPNGSLDK-ALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
C +K LV++ + + LD LF + L + K L + + + + H + +I
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHS---HNII 146
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLAPEYLLTG--RAT 559
HRD+K NI++ + +L DFG AR + + D VA T Y APE LL G +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA--TRWYRAPE-LLVGDVKYG 203
Query: 560 EKTDVFSYGAVVLEVASG 577
+ DV++ G +V E+ G
Sbjct: 204 KAVDVWAIGCLVTEMFMG 221
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 29/208 (13%)
Query: 386 RIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNS--QGKDEFLSELSIIGTLRHRNLV 439
R +G G FG V Y G+++AVK Q + + E+ I+ TL H ++V
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 440 RLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+ +G C ++GE + LV + +P GSL R LP + +G+A L + Q C
Sbjct: 74 KYKGCCEDQGEKSVQLVMEYVPLGSL-------RDYLP-----RHCVGLAQLLLFAQQIC 121
Query: 498 E-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVE--HDKSPDATVAAGTMGYL 548
E IHR + N++LD ++GDFGLA+ V H+ + +
Sbjct: 122 EGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 181
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVAS 576
APE L + +DV+S+G + E+ +
Sbjct: 182 APECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 20/203 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG G+FGTVYKG +GD+ AVK + Q F +E+ ++ RH N++ G+
Sbjct: 16 IGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
++ +V SL L + I A + YLH + +IHR
Sbjct: 73 S-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHR 128
Query: 505 DVKTSNIMLDEGFNARLGDFGLAR-QVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-- 561
D+K++NI L E ++GDFGLA + S +G++ ++APE + R +K
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI---RMQDKNP 185
Query: 562 ----TDVFSYGAVVLEVASGRRP 580
+DV+++G V+ E+ +G+ P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 386 RIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNS--QGKDEFLSELSIIGTLRHRNLV 439
R +G G FG V Y G+++AVK Q + + E+ I+ TL H ++V
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 440 RLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
+ +G C ++GE + LV + +P GSL R LP + +G+A L + Q C
Sbjct: 75 KYKGCCEDQGEKSVQLVMEYVPLGSL-------RDYLP-----RHCVGLAQLLLFAQQIC 122
Query: 498 E-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVE--HDKSPDATVAAGTMGYL 548
E IHR + N++LD ++GDFGLA+ V H+ + +
Sbjct: 123 EGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY 182
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEV 574
APE L + +DV+S+G + E+
Sbjct: 183 APECLKECKFYYASDVWSFGVTLYEL 208
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 372 YRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKD-EFLSELSI 429
+++ ++ ++G GAF V + ++A+K + + +GK+ +E+++
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 430 IGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-----DKALFEARSPLPWPHRSKILL 484
+ ++H N+V L G + L+ L+ G L +K + R S+++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIF 123
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIM---LDEGFNARLGDFGLARQVEHDKSPDATVA 541
V A+ YLH + ++HRD+K N++ LDE + DFGL++ D + A
Sbjct: 124 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 542 AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
GT GY+APE L ++ D +S G + + G P E
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 386 RIIGHGAFGTVYKG----ILPQNG-DIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
+ +G G FG V K + + G +AVK N+ + + LSE +++ + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLP---------------WPHRSKIL 483
++L G C + G +LL+ + GSL L E+R P P +
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 484 LG--------VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDK 534
+G ++ + YL E +++HRD+ NI++ EG ++ DFGL+R V E D
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 535 SPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ + ++A E L T ++DV+S+G ++ E+ +
Sbjct: 206 YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 369 EFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELS 428
E LR F ++G+G +G VYKG + G + A+K ++E E++
Sbjct: 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEIN 72
Query: 429 IIGTL-RHRNLVRLQGWCHEKG------EILLVYDLMPNGSLDKALFEAR-SPLPWPHRS 480
++ HRN+ G +K ++ LV + GS+ + + + L +
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
I + L++LHQ ++VIHRD+K N++L E +L DFG++ Q++ T
Sbjct: 133 YICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF 189
Query: 541 AAGTMGYLAPEYLLTGRATE-----KTDVFSYGAVVLEVASGRRPI 581
GT ++APE + + K+D++S G +E+A G P+
Sbjct: 190 -IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 372 YRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKD-EFLSELSI 429
+++ ++ ++G GAF V + ++A+K + + +GK+ +E+++
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAV 69
Query: 430 IGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-----DKALFEARSPLPWPHRSKILL 484
+ ++H N+V L G + L+ L+ G L +K + R S+++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIF 123
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIM---LDEGFNARLGDFGLARQVEHDKSPDATVA 541
V A+ YLH + ++HRD+K N++ LDE + DFGL++ D + A
Sbjct: 124 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 542 AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
GT GY+APE L ++ D +S G + + G P E
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 380 KCFNANRIIGHGAFGTVY---KGILPQNGDIIAVKRCS-----HNSQGKDEFLSELSIIG 431
+CF R++G G +G V+ K G I A+K N++ +E +I+
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 432 TLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALA 491
++H +V L G++ L+ + + G L L E L ++ AL
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL-EREGIFMEDTACFYLAEISMALG 135
Query: 492 YLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPE 551
+LHQ+ +I+RD+K NIML+ + +L DFGL ++ HD + GT+ Y+APE
Sbjct: 136 HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF-CGTIEYMAPE 191
Query: 552 YLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
L+ D +S GA++ ++ +G P E
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGE 224
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 85/184 (46%), Gaps = 11/184 (5%)
Query: 73 GKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSL 132
G+A YS P+ T A I N ++I GLAF + P S GG L
Sbjct: 49 GRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFL 108
Query: 133 GLLDEKGAGLGF--VAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSG 190
GL D + VAVEFDT + F+D H+G D+NS+ S + T+ L +G
Sbjct: 109 GLFDSAVGDTTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISS-----IKTVKWSLANG 163
Query: 191 DLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFS---GSTQGS 247
+ I Y+ + S+ Y + K IL+ +DL + +++ VGFS G+++G
Sbjct: 164 EAAKVLITYNSAVKLLVASLVYPSSKTSF-ILADIVDLSSVLPEWVRVGFSAATGASKGY 222
Query: 248 TEIH 251
E H
Sbjct: 223 IETH 226
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
IG G+FG V+KGI + ++A+K ++ E++++ + + G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 446 HEKGEILLVYDLMPNGS-LDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
+ ++ ++ + + GS LD L A P + +L + L YLH E + IHR
Sbjct: 91 LKGSKLWIIMEYLGGGSALD--LLRA-GPFDEFQIATMLKEILKGLDYLHSE---KKIHR 144
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDV 564
D+K +N++L E + +L DFG+A Q+ D GT ++APE + K D+
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 565 FSYGAVVLEVASGRRP 580
+S G +E+A G P
Sbjct: 204 WSLGITAIELAKGEPP 219
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 372 YRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKDEFL-SELSI 429
+++ ++ ++G GAF V + ++A+K + + +GK+ + +E+++
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAV 69
Query: 430 IGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL-----DKALFEARSPLPWPHRSKILL 484
+ ++H N+V L G + L+ L+ G L +K + R S+++
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDA------SRLIF 123
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIM---LDEGFNARLGDFGLARQVEHDKSPDATVA 541
V A+ YLH + ++HRD+K N++ LDE + DFGL++ D + A
Sbjct: 124 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTA 178
Query: 542 AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
GT GY+APE L ++ D +S G + + G P E
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 33/210 (15%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNLVRLQGW 444
IG G +GTV+K + +I+A+KR + + L E+ ++ L+H+N+VRL
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 445 CHEKGEILLVYDLMP----------NGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H ++ LV++ NG LD + ++ L + L + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKS-----------FLFQLLKGLGFCH 118
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG--TMGYLAPEY 552
V+HRD+K N++++ +L +FGLAR P +A T+ Y P+
Sbjct: 119 SR---NVLHRDLKPQNLLINRNGELKLANFGLARAF---GIPVRCYSAEVVTLWYRPPDV 172
Query: 553 LLTGR-ATEKTDVFSYGAVVLEVASGRRPI 581
L + + D++S G + E+A+ RP+
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 386 RIIGHGAFGTVYKG----ILPQNG-DIIAVKRCSHNSQGKD--EFLSELSIIGTLRHRNL 438
+ +G G FG V K + + G +AVK N+ + + LSE +++ + H ++
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLP---------------WPHRSKIL 483
++L G C + G +LL+ + GSL L E+R P P +
Sbjct: 89 IKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 484 LG--------VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDK 534
+G ++ + YL E ++HRD+ NI++ EG ++ DFGL+R V E D
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS 205
Query: 535 SPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ + ++A E L T ++DV+S+G ++ E+ +
Sbjct: 206 XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 11/231 (4%)
Query: 369 EFSYRELRSATK-CFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ----GKDEF 423
++ + E + TK F R++G G FG V + G + A K+ G+
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 424 LSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE-ARSPLPWPHRSKI 482
L+E I+ + R +V L K + LV LM G L ++ ++ P
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
+ L LH+E ++++RD+K NI+LD+ + R+ D GLA V ++ V
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-- 346
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
GT+GY+APE + R T D ++ G ++ E+ +G+ P ++ + + V
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 11/231 (4%)
Query: 369 EFSYRELRSATK-CFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ----GKDEF 423
++ + E + TK F R++G G FG V + G + A K+ G+
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 424 LSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE-ARSPLPWPHRSKI 482
L+E I+ + R +V L K + LV LM G L ++ ++ P
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
+ L LH+E ++++RD+K NI+LD+ + R+ D GLA V ++ V
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-- 346
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
GT+GY+APE + R T D ++ G ++ E+ +G+ P ++ + + V
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQGKDEFLSELSIIGTLRHR 436
++ +G GAF V + + G II K+ S K E E I L+H
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKLQHP 65
Query: 437 NLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
N+VRL E+ LV+DL+ G L + + AR S + + ++AY H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCHS- 123
Query: 497 CENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
N ++HR++K N++L +G +L DFGLA +E + S AGT GYL+PE L
Sbjct: 124 --NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
++ D+++ G ++ + G P E
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQGKDEFLSELSIIGTLRHR 436
++ +G GAF V + + G II K+ S K E E I L+H
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKLQHP 65
Query: 437 NLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
N+VRL E+ LV+DL+ G L + + AR S + + ++AY H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCHS- 123
Query: 497 CENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
N ++HR++K N++L +G +L DFGLA +E + S AGT GYL+PE L
Sbjct: 124 --NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
++ D+++ G ++ + G P E
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQGKDEFLSELSIIGTLRHR 436
++ +G GAF V + + G II K+ S K E E I L+H
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKLQHP 64
Query: 437 NLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
N+VRL E+ LV+DL+ G L + + AR S + + ++AY H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCHS- 122
Query: 497 CENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
N ++HR++K N++L +G +L DFGLA +E + S AGT GYL+PE L
Sbjct: 123 --NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 178
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
++ D+++ G ++ + G P E
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVGYPPFWDE 209
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 382 FNANRIIGHGAFGTVYK---GILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
+N ++G G+FG V K I Q + + + S ++ L E+ ++ L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
++L + +V +L G L + + R ++I+ V S + Y+H+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 499 NQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
+ ++HRD+K NI+L ++ + ++ DFGL+ + + + GT Y+APE +L
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPE-VLR 196
Query: 556 GRATEKTDVFSYGAVVLEVASGRRP 580
G EK DV+S G ++ + SG P
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 382 FNANRIIGHGAFGTVYK---GILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
+N ++G G+FG V K I Q + + + S ++ L E+ ++ L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
++L + +V +L G L + + R ++I+ V S + Y+H+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 499 NQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
+ ++HRD+K NI+L ++ + ++ DFGL+ + + + GT Y+APE +L
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPE-VLR 196
Query: 556 GRATEKTDVFSYGAVVLEVASGRRP 580
G EK DV+S G ++ + SG P
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 376 RSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKR---CSHNSQGKDEFLSELSIIGT 432
R + + + +G GA+G V+K I + G+++AVK+ NS E+ I+
Sbjct: 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTE 64
Query: 433 LR-HRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASA 489
L H N+V L + + LV+D M A+ A P H+ ++ +
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYMETDL--HAVIRANILEP-VHKQYVVYQLIKV 121
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH----------------- 532
+ YLH ++HRD+K SNI+L+ + ++ DFGL+R +
Sbjct: 122 IKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 533 ---DKSPDATVAAGTMGYLAPEYLL-TGRATEKTDVFSYGAVVLEVASGRRPI 581
D P T T Y APE LL + + T+ D++S G ++ E+ G +PI
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 382 FNANRIIGHGAFGTVYK---GILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
+N ++G G+FG V K I Q + + + S ++ L E+ ++ L H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
++L + +V +L G L + + R ++I+ V S + Y+H+
Sbjct: 84 MKLFEILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHK--- 139
Query: 499 NQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
+ ++HRD+K NI+L ++ + ++ DFGL+ + + + GT Y+APE +L
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPE-VLR 196
Query: 556 GRATEKTDVFSYGAVVLEVASGRRP 580
G EK DV+S G ++ + SG P
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQGKDEFLSELSIIGTLRHR 436
++ +G GAF V + + G II K+ S K E E I L+H
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKLQHP 88
Query: 437 NLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
N+VRL E+ LV+DL+ G L + + AR S + + ++AY H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESIAYCHS- 146
Query: 497 CENQVIHRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
N ++HR++K N++L +G +L DFGLA +E + S AGT GYL+PE L
Sbjct: 147 --NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 202
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
++ D+++ G ++ + G P E
Sbjct: 203 KKDPYSKPVDIWACGVILYILLVGYPPFWDE 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 388 IGHGAFGTVYKGILPQNGD-----IIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+G GAF V + + G II K+ S K E E I L+H N+VRL
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE--REARICRLLKHPNIVRLH 87
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
E+G L++DL+ G L + + AR S + + A+ + HQ V+
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVLHCHQ---MGVV 143
Query: 503 HRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
HRD+K N++L +G +L DFGLA +VE ++ AGT GYL+PE L
Sbjct: 144 HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF-AGTPGYLSPEVLRKDPYG 202
Query: 560 EKTDVFSYGAVVLEVASGRRPIEKE 584
+ D+++ G ++ + G P E
Sbjct: 203 KPVDLWACGVILYILLVGYPPFWDE 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 16/201 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS--HNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
IG GA+G V N +A+K+ S + L E+ I+ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 446 -----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 95 RAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA---N 148
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 559 -TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 209 YTKSIDIWSVGCILAEMLSNR 229
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS--HNSQGKDEFLSELSIIGTLRHRNLV 439
+ +IG GA V + +A+KR + DE L E+ + H N+V
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 440 RLQGWCHEKGEILLVYDLMPNGS-LD-----KALFEARS-PLPWPHRSKILLGVASALAY 492
K E+ LV L+ GS LD A E +S L + IL V L Y
Sbjct: 77 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 493 LHQECENQVIHRDVKTSNIMLDEGFNARLGDFG----LARQVEHDKSPDATVAAGTMGYL 548
LH+ N IHRDVK NI+L E + ++ DFG LA + ++ GT ++
Sbjct: 137 LHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 193
Query: 549 APEYLLTGRATE-KTDVFSYGAVVLEVASGRRPIEK 583
APE + R + K D++S+G +E+A+G P K
Sbjct: 194 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 35/221 (15%)
Query: 388 IGHGAFGTVYKGIL--PQNGD---IIAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
+G FG VYKG L P G+ +A+K ++G ++EF E + L+H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSP----------------LPWPHRSKILL 484
L G + + +++ +G L + L RSP L P ++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLV-MRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT 544
+A+ + YL + V+H+D+ T N+++ + N ++ D GL R+V + D G
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV---YAADYYKLLGN 206
Query: 545 ----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ ++APE ++ G+ + +D++SYG V+ EV S G +P
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS--HNSQGKDEFLSELSIIGTLRHRNLV 439
+ +IG GA V + +A+KR + DE L E+ + H N+V
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 440 RLQGWCHEKGEILLVYDLMPNGS-LD-----KALFEARS-PLPWPHRSKILLGVASALAY 492
K E+ LV L+ GS LD A E +S L + IL V L Y
Sbjct: 72 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 493 LHQECENQVIHRDVKTSNIMLDEGFNARLGDFG----LARQVEHDKSPDATVAAGTMGYL 548
LH+ N IHRDVK NI+L E + ++ DFG LA + ++ GT ++
Sbjct: 132 LHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWM 188
Query: 549 APEYLLTGRATE-KTDVFSYGAVVLEVASGRRPIEK 583
APE + R + K D++S+G +E+A+G P K
Sbjct: 189 APEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENIIGINDI 91
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 145
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + + LT+ V + G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKEKLTLTKAVK---NTVGRALYSSPIHIWDRETGNVANFVTSFTFVINA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLD--EKGAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + E VAVEFDT + + N
Sbjct: 74 PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSNR 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPI 221
+ H+G+D+NS+ S ++T + L++G+ N I ++ T +S++Y N + +
Sbjct: 134 DRHIGIDVNSIKS-----VNTKSWKLQNGEEANVVIAFNAATNVLTVSLTYPNNSLEEEV 188
Query: 222 LSFTL----DLDQYVNDFMYVGFSGSTQGSTEIH 251
S+TL L V +++ +GFS +T H
Sbjct: 189 TSYTLSDVVSLKDVVPEWVRIGFSATTGAEYAAH 222
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 89
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 143
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 89
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 143
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 93
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 147
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 388 IGHGAFGTVYKGIL--PQNGD---IIAVKRCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
+G FG VYKG L P G+ +A+K ++G ++EF E + L+H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSP----------------LPWPHRSKILL 484
L G + + +++ +G L + L RSP L P ++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLV-MRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT 544
+A+ + YL + V+H+D+ T N+++ + N ++ D GL R+V + D G
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV---YAADYYKLLGN 189
Query: 545 ----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ ++APE ++ G+ + +D++SYG V+ EV S
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 89
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 143
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 87
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 141
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 94
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 148
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 91
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 145
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 95
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 96 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 149
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 150 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 210 GYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 86
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 87 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 140
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 141 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 201 GYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 93
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 147
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 97
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 98 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 151
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 152 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 212 GYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 89
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 143
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 89
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 143
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 87
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 141
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENIIGINDI 91
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 145
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 146 NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 388 IGHGAFGTVYKGI--LPQN---GDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+G GAF V + + P II K+ S K E E I L+H N+VRL
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE--REARICRLLKHPNIVRLH 96
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
E+G LV+DL+ G L + + AR S + + ++ ++HQ + ++
Sbjct: 97 DSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIHQILESVNHIHQ---HDIV 152
Query: 503 HRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
HRD+K N++L +G +L DFGLA +V+ ++ AGT GYL+PE L
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF-AGTPGYLSPEVLRKDPYG 211
Query: 560 EKTDVFSYGAVVLEVASGRRPIEKE 584
+ D+++ G ++ + G P E
Sbjct: 212 KPVDIWACGVILYILLVGYPPFWDE 236
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|B Chain B, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|C Chain C, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|D Chain D, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|E Chain E, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|F Chain F, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1G7Y|A Chain A, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|B Chain B, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|C Chain C, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|D Chain D, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|E Chain E, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|F Chain F, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
Length = 253
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 21/227 (9%)
Query: 36 FDFGTLTLASLKLLGDAHMNNGSVRLTRDVTVPYDGA------GKALYSKPVRFRLPGTH 89
F F +S L GDA +++ +RLT+ V +G G+A YS P++ T
Sbjct: 6 FSFKNFNSSSFILQGDATVSSSKLRLTK---VKGNGLPTLSSLGRAFYSSPIQIYDKSTG 62
Query: 90 TPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAV 147
A I N SS G+AF + P G + S G LG+ D VAV
Sbjct: 63 AVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAV 122
Query: 148 EFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFN 207
EFDT + ++ D H+G+D+NS+ S + T + L +G I Y+ T
Sbjct: 123 EFDTFSNTDW-DPTSRHIGIDVNSIKS-----IRTASWGLANGQNAEILITYNAATSLLV 176
Query: 208 ISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST---QGSTEIH 251
S+ + + + I+S +D+ + +++ +GFS +T +G TE H
Sbjct: 177 ASLVHPSRRTSY-IVSERVDITNELPEYVSIGFSATTGLSEGYTETH 222
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 109
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 110 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 163
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 164 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKR--CSHNSQGKDEFLSELSI-IGTLRHRNLVRLQGW 444
+G GA+G V K +G I AVKR + NSQ + L +L I T+ V G
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 445 CHEKGEILLVYDLMPNGSLDK---ALFEARSPLPWPHRSKILLGVASALAYLHQECENQV 501
+G++ + +L + SLDK + + +P KI + + AL +LH + V
Sbjct: 102 LFREGDVWICXELX-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SV 158
Query: 502 IHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL---LTGRA 558
IHRDVK SN++++ + DFG++ + D + D + AG Y APE + L +
Sbjct: 159 IHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD--IDAGCKPYXAPERINPELNQKG 216
Query: 559 -TEKTDVFSYGAVVLEVASGRRPIE 582
+ K+D++S G +E+A R P +
Sbjct: 217 YSVKSDIWSLGITXIELAILRFPYD 241
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 388 IGHGAFGTVYKGILPQNGD-----IIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+G GAF V + + G II K+ S K E E I L+H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE--REARICRLLKHPNIVRLH 69
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
E+G LV+DL+ G L + + AR S + + ++ + H N ++
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIQQILESVNHCHL---NGIV 125
Query: 503 HRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
HRD+K N++L +G +L DFGLA +V+ D+ AGT GYL+PE L
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF-AGTPGYLSPEVLRKDPYG 184
Query: 560 EKTDVFSYGAVVLEVASGRRPIEKE 584
+ D+++ G ++ + G P E
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWDE 209
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 93
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KCQHLSNDHICYFLYQILRGLKYIHSA--- 147
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHN---SQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG+GA+G V G +A+K+ + L EL I+ +H N++ ++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 445 CH------EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E + +V DLM L + + + PL H L + L Y+H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLM-ESDLHQ-IIHSSQPLTLEHVRYFLYQLLRGLKYMHS--- 176
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLAR-----QVEHDKSPDATVAAGTMGYLAPEYL 553
QVIHRD+K SN++++E ++GDFG+AR EH VA T Y APE +
Sbjct: 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA--TRWYRAPELM 234
Query: 554 LT-GRATEKTDVFSYGAVVLEVASGRR 579
L+ T+ D++S G + E+ + R+
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 382 FNANRIIGHGAFGTVY--KGILPQNGDII----AVKRCSHNSQGKDEFLSELSIIGTLRH 435
F +++G G+FG V+ K I + + +K+ + + + E I+ + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG-VASALAYLH 494
+V+L +G++ L+ D + G L L ++ + K L +A AL +LH
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH 143
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ-VEHDKSPDATVAAGTMGYLAPEYL 553
+I+RD+K NI+LDE + +L DFGL+++ ++H+K A GT+ Y+APE +
Sbjct: 144 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVV 198
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
T+ D +S+G ++ E+ +G P +
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 382 FNANRIIGHGAFGTVY--KGILPQNGDII----AVKRCSHNSQGKDEFLSELSIIGTLRH 435
F +++G G+FG V+ K I + + +K+ + + + E I+ + H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG-VASALAYLH 494
+V+L +G++ L+ D + G L L ++ + K L +A AL +LH
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH 143
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ-VEHDKSPDATVAAGTMGYLAPEYL 553
+I+RD+K NI+LDE + +L DFGL+++ ++H+K A GT+ Y+APE +
Sbjct: 144 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVV 198
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
T+ D +S+G ++ E+ +G P +
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 382 FNANRIIGHGAFGTVY--KGILPQNGDII----AVKRCSHNSQGKDEFLSELSIIGTLRH 435
F +++G G+FG V+ K I + + +K+ + + + E I+ + H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG-VASALAYLH 494
+V+L +G++ L+ D + G L L ++ + K L +A AL +LH
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLH 144
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ-VEHDKSPDATVAAGTMGYLAPEYL 553
+I+RD+K NI+LDE + +L DFGL+++ ++H+K A GT+ Y+APE +
Sbjct: 145 SLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK--AYSFCGTVEYMAPEVV 199
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
T+ D +S+G ++ E+ +G P +
Sbjct: 200 NRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 388 IGHGAFGTVYKGILPQNGD-----IIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+G GAF V + + G II K+ S K E E I L+H N+VRL
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE--REARICRLLKHPNIVRLH 69
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
E+G LV+DL+ G L + + AR S + + ++ + H N ++
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIV-AREYYSEADASHCIQQILESVNHCHL---NGIV 125
Query: 503 HRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
HRD+K N++L +G +L DFGLA +V+ D+ AGT GYL+PE L
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGF-AGTPGYLSPEVLRKDPYG 184
Query: 560 EKTDVFSYGAVVLEVASGRRPIEKE 584
+ D+++ G ++ + G P E
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWDE 209
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 106/220 (48%), Gaps = 25/220 (11%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGKD- 421
P F R L+ ++ +G G FG+V Y + G ++AVK+ H+ +
Sbjct: 1 PTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 53
Query: 422 EFLSELSIIGTLRHRNLVRLQGWCHEKG--EILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+F E+ I+ L +V+ +G + G E+ LV + +P+G L L R+ L
Sbjct: 54 DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL---DA 110
Query: 480 SKILL---GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSP 536
S++LL + + YL + +HRD+ NI+++ + ++ DFGLA+ + DK
Sbjct: 111 SRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDX 167
Query: 537 DATVAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
G + + APE L + ++DV+S+G V+ E+
Sbjct: 168 XVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+++ S H + + L E+ I+ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 93
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 147
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 18/263 (6%)
Query: 354 KKSESFTSDIIRMPKEFSYRELRSATKCFNA------NRIIGHGAFGTVYKGILPQNGDI 407
K++ + DI P F +R + + N+ I+G G FG V+K G
Sbjct: 57 KRTSALAVDIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLK 116
Query: 408 IAVKRC-SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKA 466
+A K + + K+E +E+S++ L H NL++L K +I+LV + + G L
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR 176
Query: 467 LFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIML--DEGFNARLGDF 524
+ + L + + + ++HQ ++H D+K NI+ + ++ DF
Sbjct: 177 IIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDF 233
Query: 525 GLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
GLAR+ + V GT +LAPE + + TD++S G + + SG P
Sbjct: 234 GLARR--YKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP---- 287
Query: 585 ITGVGKVGVASNLVEWVWSLHRE 607
G +N++ W L E
Sbjct: 288 FLGDNDAETLNNILACRWDLEDE 310
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 40/225 (17%)
Query: 386 RIIGHGAFGTVYK----GILPQNGDI-IAVK--RCSHNSQGKDEFLSELSIIGTL-RHRN 437
+ +G GAFG V + G+ ++ + +AVK + + ++ K+ +SEL I+ L +H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSL--------------------DKALFEARSPLPWP 477
+V L G C G +L++ + G L D + P
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 478 HRSKILLG--VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
R + VA +A+L IHRDV N++L G A++GDFGLAR + +D +
Sbjct: 157 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 213
Query: 536 PDATVAAGT----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
+ G + ++APE + T ++DV+SYG ++ E+ S
Sbjct: 214 ---YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 22/207 (10%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHN---SQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG+GA+G V G +A+K+ + L EL I+ +H N++ ++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 445 CH------EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E + +V DLM L + + + PL H L + L Y+H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLM-ESDLHQ-IIHSSQPLTLEHVRYFLYQLLRGLKYMHS--- 177
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLAR-----QVEHDKSPDATVAAGTMGYLAPEYL 553
QVIHRD+K SN++++E ++GDFG+AR EH VA T Y APE +
Sbjct: 178 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA--TRWYRAPELM 235
Query: 554 LT-GRATEKTDVFSYGAVVLEVASGRR 579
L+ T+ D++S G + E+ + R+
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 388 IGHGAFGTVYKGILPQNGD-----IIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+G GAF V + + G II K+ S K E E I L+H N+VRL
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE--REARICRLLKHPNIVRLH 76
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
E+G L++DL+ G L + + AR S + + A+ + HQ V+
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIV-AREYYSEADASHCIQQILEAVLHCHQ---MGVV 132
Query: 503 HRDVKTSNIMLD---EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
HR++K N++L +G +L DFGLA +VE ++ AGT GYL+PE L
Sbjct: 133 HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF-AGTPGYLSPEVLRKDPYG 191
Query: 560 EKTDVFSYGAVVLEVASGRRPIEKE 584
+ D+++ G ++ + G P E
Sbjct: 192 KPVDLWACGVILYILLVGYPPFWDE 216
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 104/236 (44%), Gaps = 26/236 (11%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG--DIIAVK-----RCSHNSQGKDEFLSELSIIGTLR 434
F R IG G+FG V I+ +N + A+K +C ++ ++ F EL I+ L
Sbjct: 17 FEILRAIGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF-KELQIMQGLE 73
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H LV L ++ ++ +V DL+ G L L + + + AL YL
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL-QQNVHFKEETVKLFICELVMALDYLQ 132
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
+ ++IHRD+K NI+LDE + + DF +A + + T AGT Y+APE
Sbjct: 133 NQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP--RETQITTMAGTKPYMAPEMFS 187
Query: 555 TGRA---TEKTDVFSYGAVVLEVASGRRPIE-------KEITGVGKVGVASNLVEW 600
+ + + D +S G E+ GRRP KEI + V + W
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW 243
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF----LSELSIIGTLRHRNLVRLQG 443
IG G FG V+K + G +A+K+ ++ K+ F L E+ I+ L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIE 84
Query: 444 WCHEK--------GEILLVYDLMPN---GSLDKALFEARSPLPWPHRSKILLGVASALAY 492
C K G I LV+D + G L L + +++ + + L Y
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYY 140
Query: 493 LHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG---TMGYLA 549
+H+ N+++HRD+K +N+++ +L DFGLAR K+ T+ Y
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 550 PEYLLTGRAT-EKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNL 597
PE LL R D++ G ++ E+ + R PI + T ++ + S L
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQL 245
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 93
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 147
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T Y APE +L +
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 94
Query: 445 C-----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ +V DLM L K L L H L + L Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLM-ETDLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 148
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T Y APE +L +
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 388 IGHGAFGTVYKGI-LPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH------RNLVR 440
IG GA+G V+K L G +A+KR + + LS + + LRH N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 441 LQGWC-----HEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHRSKILLGVASALAYLH 494
L C + ++ LV++ + + L L + P +P ++ + L +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
++V+HRD+K NI++ +L DFGLAR + + V T+ Y APE LL
Sbjct: 138 S---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVG 592
D++S G + E+ R+P+ + + V ++G
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLG 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF----LSELSIIGTLRHRNLVRLQG 443
IG G FG V+K + G +A+K+ ++ K+ F L E+ I+ L+H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIE 83
Query: 444 WCHEK--------GEILLVYDLMPN---GSLDKALFEARSPLPWPHRSKILLGVASALAY 492
C K G I LV+D + G L L + +++ + + L Y
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYY 139
Query: 493 LHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG---TMGYLA 549
+H+ N+++HRD+K +N+++ +L DFGLAR K+ T+ Y
Sbjct: 140 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 550 PEYLLTGRAT-EKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNL 597
PE LL R D++ G ++ E+ + R PI + T ++ + S L
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQL 244
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 388 IGHGAFGTVYKGI-LPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH------RNLVR 440
IG GA+G V+K L G +A+KR + + LS + + LRH N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 441 LQGWC-----HEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHRSKILLGVASALAYLH 494
L C + ++ LV++ + + L L + P +P ++ + L +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
++V+HRD+K NI++ +L DFGLAR + + V T+ Y APE LL
Sbjct: 138 S---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVG 592
D++S G + E+ R+P+ + + V ++G
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLG 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 18/204 (8%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG GA+G V +A+K+ S H + + L E+ I+ RH N++ ++
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQ-RTLREIQILLRFRHENVIGIR 107
Query: 443 GWCHEKG-----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
++ +V DLM L K L + L H L + L Y+H
Sbjct: 108 DILRASTLEAMRDVYIVQDLM-ETDLYKLLKSQQ--LSNDHICYFLYQILRGLKYIHSA- 163
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLT 555
V+HRD+K SN++++ + ++ DFGLAR EHD + T T Y APE +L
Sbjct: 164 --NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 556 GRA-TEKTDVFSYGAVVLEVASGR 578
+ T+ D++S G ++ E+ S R
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 367 PKEFSYRELRSATKCFN-ANRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGK 420
P+E +E+ K ++ +G G FGTV KG + +K +++ K
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 72
Query: 421 DEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS 480
DE L+E +++ L + +VR+ G C E +LV ++ G L+K L + R + +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII 130
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
+++ V+ + YL E+ +HRD+ N++L A++ DFGL++ + D++
Sbjct: 131 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 541 AAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
G + + APE + + + K+DV+S+G ++ E S G++P
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 367 PKEFSYRELRSATKCFN-ANRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGK 420
P+E +E+ K ++ +G G FGTV KG + +K +++ K
Sbjct: 13 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 72
Query: 421 DEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS 480
DE L+E +++ L + +VR+ G C E +LV ++ G L+K L + R + +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII 130
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
+++ V+ + YL E+ +HRD+ N++L A++ DFGL++ + D++
Sbjct: 131 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 541 AAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
G + + APE + + + K+DV+S+G ++ E S G++P
Sbjct: 188 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 28/229 (12%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF----LSELSIIGTLRHRNLVRLQG 443
IG G FG V+K + G +A+K+ ++ K+ F L E+ I+ L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIE 84
Query: 444 WCHEK--------GEILLVYDLMPN---GSLDKALFEARSPLPWPHRSKILLGVASALAY 492
C K G I LV+D + G L L + +++ + + L Y
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYY 140
Query: 493 LHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG---TMGYLA 549
+H+ N+++HRD+K +N+++ +L DFGLAR K+ T+ Y
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 550 PEYLLTGRAT-EKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNL 597
PE LL R D++ G ++ E+ + R PI + T ++ + S L
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQL 245
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 367 PKEFSYRELRSATKCFN-ANRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGK 420
P+E +E+ K ++ +G G FGTV KG + +K +++ K
Sbjct: 11 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 70
Query: 421 DEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS 480
DE L+E +++ L + +VR+ G C E +LV ++ G L+K L + R + +
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII 128
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
+++ V+ + YL E+ +HRD+ N++L A++ DFGL++ + D++
Sbjct: 129 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 541 AAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
G + + APE + + + K+DV+S+G ++ E S G++P
Sbjct: 186 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
IG GA+G V N +A+K+ S H + + L E+ I+ RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENIIGINDI 109
Query: 445 CH-----EKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
+ ++ LV LM L K L L H L + L Y+H
Sbjct: 110 IRAPTIEQMKDVYLVTHLM-GADLYKLL--KTQHLSNDHICYFLYQILRGLKYIHSA--- 163
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLAR--QVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
V+HRD+K SN++L+ + ++ DFGLAR +HD + T T Y APE +L +
Sbjct: 164 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 558 A-TEKTDVFSYGAVVLEVASGR 578
T+ D++S G ++ E+ S R
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++ +G G FGTV KG + +K +++ KDE L+E +++ L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
R+ G C E +LV ++ G L+K L + R + + +++ V+ + YL E+
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE---ES 130
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGR 557
+HRD+ N++L A++ DFGL++ + D++ G + + APE + +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
+ K+DV+S+G ++ E S G++P
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 20/218 (9%)
Query: 388 IGHGAFGTVYKGI-LPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH------RNLVR 440
IG GA+G V+K L G +A+KR + + LS + + LRH N+VR
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 441 LQGWC-----HEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHRSKILLGVASALAYLH 494
L C + ++ LV++ + + L L + P +P ++ + L +LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
++V+HRD+K NI++ +L DFGLAR + + V T+ Y APE LL
Sbjct: 138 S---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPEVLL 192
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVG 592
D++S G + E+ R+P+ + + V ++G
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLG 229
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++ +G G FGTV KG + +K +++ KDE L+E +++ L + +V
Sbjct: 12 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
R+ G C E +LV ++ G L+K L + R + + +++ V+ + YL E+
Sbjct: 72 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE---ES 126
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGR 557
+HRD+ N++L A++ DFGL++ + D++ G + + APE + +
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
+ K+DV+S+G ++ E S G++P
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 11/217 (5%)
Query: 373 RELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKDEFL-SELSII 430
++ K F +G GAF V G + AVK + +GK+ + +E++++
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
++H N+V L+ + LV L+ G L + E + S ++ V A+
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVE-KGFYTEKDASTLIRQVLDAV 133
Query: 491 AYLHQECENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
YLH+ ++HRD+K N++ DE + DFGL++ K + A GT GY
Sbjct: 134 YYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGY 188
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
+APE L ++ D +S G + + G P E
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 225
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++ +G G FGTV KG + +K +++ KDE L+E +++ L + +V
Sbjct: 10 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
R+ G C E +LV ++ G L+K L + R + + +++ V+ + YL E+
Sbjct: 70 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE---ES 124
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGR 557
+HRD+ N++L A++ DFGL++ + D++ G + + APE + +
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
+ K+DV+S+G ++ E S G++P
Sbjct: 185 FSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 110/228 (48%), Gaps = 19/228 (8%)
Query: 32 TATEFDFGTLTLASLKLLGDAHM-NNGSVRLTR--DVTVPYDGA-GKALYSKPVRFRLPG 87
T T+F+ G L GDA + +N +++LT+ P G+ G+ALY+ P+R
Sbjct: 7 TFTDFESGQQDLI---FQGDASVGSNKALQLTKVDSKGNPQGGSVGRALYTAPIRL-WQS 62
Query: 88 THTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGE-QVGSAGGSLGLL---DEKGAGLG 143
+ A I+ + + A F+ +PD + GS G LGL + G+ G
Sbjct: 63 SSLVASFETTFTFSISQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSNNAGSDNG 122
Query: 144 FVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLT 203
V+VEFDT + + D N H+G+D+NS+ S D ++G + I Y+ +
Sbjct: 123 VVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASKW-----DWQNGKTATAHISYNSAS 177
Query: 204 RAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQGSTEIH 251
+ ++ SY N P V +SF ++L+ ++ VGFS +T T+ +
Sbjct: 178 KRLSVVSSYPNSSPVV--VSFDVELNNVXPXWVRVGFSATTGQYTQTN 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++ +G G FGTV KG + +K +++ KDE L+E +++ L + +V
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 81
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
R+ G C E +LV ++ G L+K L + R + + +++ V+ + YL E+
Sbjct: 82 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE---ES 136
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGR 557
+HRD+ N++L A++ DFGL++ + D++ G + + APE + +
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
+ K+DV+S+G ++ E S G++P
Sbjct: 197 FSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 106/204 (51%), Gaps = 13/204 (6%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++ +G G FGTV KG + +K +++ KDE L+E +++ L + +V
Sbjct: 16 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
R+ G C E +LV ++ G L+K L + R + + +++ V+ + YL E+
Sbjct: 76 RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE---ES 130
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT--MGYLAPEYLLTGR 557
+HRD+ N++L A++ DFGL++ + D++ G + + APE + +
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 558 ATEKTDVFSYGAVVLEVAS-GRRP 580
+ K+DV+S+G ++ E S G++P
Sbjct: 191 FSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 386 RIIGHGAFGTVYK----GILPQNGDI-IAVKRCSH--NSQGKDEFLSELSIIGTL-RHRN 437
+++G GAFG V GI I +AVK +S ++ +SEL ++ L H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-----LPWPHRSKI-------LLG 485
+V L G C G I L+++ G L L R + + ++ ++ +L
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 486 VASALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDA 538
L + +Q + +HRD+ N+++ G ++ DFGLAR + D +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN--- 227
Query: 539 TVAAGT----MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS 576
V G + ++APE L G T K+DV+SYG ++ E+ S
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 23/252 (9%)
Query: 351 KHVKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAV 410
++++ ++ FTS + +++R + F ++IG GAFG V L + A+
Sbjct: 54 EYLEWAKPFTSKV---------KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAM 104
Query: 411 KRCSHNSQGKDE----FLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKA 466
K + K F E ++ + + L + + LV D G L
Sbjct: 105 KILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTL 164
Query: 467 LFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGL 526
L + LP L + A+ +HQ +HRD+K NI++D + RL DFG
Sbjct: 165 LSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGS 221
Query: 527 ARQVEHDKSPDATVAAGTMGYLAPEYLLT-----GRATEKTDVFSYGAVVLEVASGRRPI 581
++ D + ++VA GT Y++PE L GR + D +S G + E+ G P
Sbjct: 222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
Query: 582 EKE--ITGVGKV 591
E + GK+
Sbjct: 282 YAESLVETYGKI 293
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 30/271 (11%)
Query: 341 VLIWFFSKRYKHVKKSESFTSDIIRMPKEFSY--RELRSATKCFNANRIIGHGAFGTVYK 398
VL+ +++ + + + ++ + K F+ +E++ + F ++IG GAFG V
Sbjct: 49 VLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAV 108
Query: 399 GILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH----------EK 448
+ I A+K + K E L R V + G C ++
Sbjct: 109 VKMKNTERIYAMKILN-----KWEMLKRAET-ACFREERDVLVNGDCQWITALHYAFQDE 162
Query: 449 GEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG-VASALAYLHQECENQVIHRDVK 507
+ LV D G L L + LP ++ +G + A+ +HQ +HRD+K
Sbjct: 163 NHLYLVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIGEMVLAIDSIHQ---LHYVHRDIK 218
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT-----GRATEKT 562
N++LD + RL DFG ++ D + ++VA GT Y++PE L G+ +
Sbjct: 219 PDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC 278
Query: 563 DVFSYGAVVLEVASGRRPIEKE--ITGVGKV 591
D +S G + E+ G P E + GK+
Sbjct: 279 DWWSLGVCMYEMLYGETPFYAESLVETYGKI 309
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 30/271 (11%)
Query: 341 VLIWFFSKRYKHVKKSESFTSDIIRMPKEFSY--RELRSATKCFNANRIIGHGAFGTVYK 398
VL+ +++ + + + ++ + K F+ +E++ + F ++IG GAFG V
Sbjct: 33 VLVCLYTECSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAV 92
Query: 399 GILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH----------EK 448
+ I A+K + K E L R V + G C ++
Sbjct: 93 VKMKNTERIYAMKILN-----KWEMLKRAET-ACFREERDVLVNGDCQWITALHYAFQDE 146
Query: 449 GEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG-VASALAYLHQECENQVIHRDVK 507
+ LV D G L L + LP ++ +G + A+ +HQ +HRD+K
Sbjct: 147 NHLYLVMDYYVGGDLLTLLSKFEDKLP-EDMARFYIGEMVLAIDSIHQ---LHYVHRDIK 202
Query: 508 TSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT-----GRATEKT 562
N++LD + RL DFG ++ D + ++VA GT Y++PE L G+ +
Sbjct: 203 PDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPEC 262
Query: 563 DVFSYGAVVLEVASGRRPIEKE--ITGVGKV 591
D +S G + E+ G P E + GK+
Sbjct: 263 DWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +AVK + NS + E+ I+ L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + LV + G + L R+K + SA+ Y HQ+ ++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IV 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + DA G Y APE L G+ +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF--CGAPPYAAPE-LFQGKKYDGP 192
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 367 PKEFSYRELRSATKCFN-ANRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGK 420
P+E +E+ K ++ +G G FGTV KG + +K +++ K
Sbjct: 355 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 414
Query: 421 DEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS 480
DE L+E +++ L + +VR+ G C E +LV ++ G L+K L + R + +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII 472
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
+++ V+ + YL E+ +HRD+ N++L A++ DFGL++ + D++
Sbjct: 473 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 541 AAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
G + + APE + + + K+DV+S+G ++ E S G++P
Sbjct: 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 367 PKEFSYRELRSATKCFN-ANRIIGHGAFGTVYKGILPQNGDIIA-----VKRCSHNSQGK 420
P+E +E+ K ++ +G G FGTV KG + +K +++ K
Sbjct: 356 PEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK 415
Query: 421 DEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS 480
DE L+E +++ L + +VR+ G C E +LV ++ G L+K L + R + +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNII 473
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
+++ V+ + YL E+ +HRD+ N++L A++ DFGL++ + D++
Sbjct: 474 ELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 541 AAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
G + + APE + + + K+DV+S+G ++ E S G++P
Sbjct: 531 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 382 FNANRIIGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL- 433
N + +G GAFG V + GI +AVK + + +SEL I+ +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 434 RHRNLVRLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSP-LPWPHRSKILLGVASALA 491
H N+V L G C + G ++++ + G+L L R+ +P+ K L + +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 492 YLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---A 541
Y Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDA 206
Query: 542 AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEW 600
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEE 255
Query: 601 VWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 256 FCRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 16/260 (6%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLR-HRNLVRLQG 443
++ +G G+F K + ++ AVK S + + E++ + H N+V+L
Sbjct: 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ--KEITALKLCEGHPNIVKLHE 73
Query: 444 WCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
H++ LV +L+ G L + + + + S I+ + SA++++H + V+H
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLVSAVSHMH---DVGVVH 129
Query: 504 RDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE 560
RD+K N++ ++ ++ DFG AR D P T T+ Y APE L E
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT-PCFTLHYAAPELLNQNGYDE 188
Query: 561 KTDVFSYGAVVLEVASGRRPIE---KEITGVGKVGVASNLVEWVWSLHREGRLLTAADAR 617
D++S G ++ + SG+ P + + +T V + + + +S E + +A+
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAK 248
Query: 618 --LEGQFDEAEMRRVLLVGL 635
++G +R+ + GL
Sbjct: 249 DLIQGLLTVDPNKRLKMSGL 268
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++ + +G GAFG V++ G+ A K H S K+ E+ + LRH LV
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-KETVRKEIQTMSVLRHPTLV 111
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
L + E++++Y+ M G L + + + + + + + V L ++H EN
Sbjct: 112 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---EN 168
Query: 500 QVIHRDVKTSNIML--DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+H D+K NIM +L DFGL ++ +S V GT + APE
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKP 226
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
TD++S G + + SG P
Sbjct: 227 VGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 10/204 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK--RCSHNSQGKDEFLSELSIIGTLRHRNLV 439
++ + +G GAFG V++ G+ A K H S K+ E+ + LRH LV
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-KETVRKEIQTMSVLRHPTLV 217
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECEN 499
L + E++++Y+ M G L + + + + + + + V L ++H EN
Sbjct: 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---EN 274
Query: 500 QVIHRDVKTSNIML--DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+H D+K NIM +L DFGL ++ +S V GT + APE
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS--VKVTTGTAEFAAPEVAEGKP 332
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
TD++S G + + SG P
Sbjct: 333 VGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKRCSHNS--QGKDEFLSELSIIGTLRHRNLVRLQGW 444
I+G GA V++G + GD+ A+K ++ S + D + E ++ L H+N+V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 445 CHEKG--EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
E +L+ + P GSL L E + P S+ L+ + + ++ EN ++
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP-ESEFLIVLRDVVGGMNHLRENGIV 134
Query: 503 HRDVKTSNIMLDEGFNA----RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
HR++K NIM G + +L DFG AR++E D+ GT YL P+ + RA
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVXLYGTEEYLHPD--MYERA 190
Query: 559 TEKTD-VFSYGAVV 571
+ D YGA V
Sbjct: 191 VLRKDHQKKYGATV 204
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 386 RIIGHGAFGTVYKGILPQNG---DIIAVKRCSHNSQGK------------DEFLSELSII 430
R +G GA+G V +NG I V + S +G+ +E +E+S++
Sbjct: 42 RKLGSGAYGEVL-LCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL 100
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
+L H N+++L +K LV + G L + + R + I+ + S +
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN-RHKFDECDAANIMKQILSGI 159
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEG---FNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
YLH+ + ++HRD+K NI+L+ N ++ DFGL+ D + GT Y
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL--GTAYY 214
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
+APE +L + EK DV+S G ++ + G P
Sbjct: 215 IAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 129/295 (43%), Gaps = 43/295 (14%)
Query: 382 FNANRIIGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL- 433
N + +G GAFG V + GI +AVK + + +SEL I+ +
Sbjct: 29 LNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIG 88
Query: 434 RHRNLVRLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSP-LPWPHRSKILLGVASALA 491
H N+V L G C + G ++++ + G+L L R+ +P+ K L + +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 492 YLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---A 541
Y Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD--PDYVRKGDA 206
Query: 542 AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEW 600
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEE 255
Query: 601 VWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 256 FXRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 14/194 (7%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKRCSHNS--QGKDEFLSELSIIGTLRHRNLVRLQGW 444
I+G GA V++G + GD+ A+K ++ S + D + E ++ L H+N+V+L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 445 CHEKG--EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
E +L+ + P GSL L E + P S+ L+ + + ++ EN ++
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLP-ESEFLIVLRDVVGGMNHLRENGIV 134
Query: 503 HRDVKTSNIMLDEGFNA----RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
HR++K NIM G + +L DFG AR++E D+ GT YL P+ + RA
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ--FVSLYGTEEYLHPD--MYERA 190
Query: 559 TEKTD-VFSYGAVV 571
+ D YGA V
Sbjct: 191 VLRKDHQKKYGATV 204
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF----LSELSIIGTLRHRNLVRLQG 443
IG G FG V+K + G +A+K+ ++ K+ F L E+ I+ L+H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIE 84
Query: 444 WCHEKGE--------ILLVYDLMPN---GSLDKALFEARSPLPWPHRSKILLGVASALAY 492
C K I LV+D + G L L + +++ + + L Y
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLLNGLYY 140
Query: 493 LHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAG---TMGYLA 549
+H+ N+++HRD+K +N+++ +L DFGLAR K+ T+ Y
Sbjct: 141 IHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 550 PEYLLTGRAT-EKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNL 597
PE LL R D++ G ++ E+ + R PI + T ++ + S L
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQL 245
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 13/228 (5%)
Query: 359 FTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVY---KGILPQNGDIIAVKRCSH 415
F D+ P F + ++ + + +G GA+G V + I +++ S
Sbjct: 16 FQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV 75
Query: 416 NSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLP 475
++ + L E++++ L H N+++L + +K LV + G L + R
Sbjct: 76 STSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH-RMKFN 134
Query: 476 WPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFN---ARLGDFGLARQVEH 532
+ I+ V S + YLH+ + ++HRD+K N++L+ ++ DFGL+ E+
Sbjct: 135 EVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191
Query: 533 DKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
K + GT Y+APE +L + EK DV+S G ++ + +G P
Sbjct: 192 QKKMKERL--GTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAGYPP 236
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +AVK + NS + E+ I+ L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + LV + G + L R+K + SA+ Y HQ+ ++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IV 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + D G+ Y APE L G+ +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGP 192
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLVRLQGW 444
I G FG V+K L D +AVK Q K + SE I T ++H NL++
Sbjct: 22 IKARGRFGCVWKAQL--MNDFVAVK--IFPLQDKQSWQSEREIFSTPGMKHENLLQFIA- 76
Query: 445 CHEKG-----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE--- 496
++G E+ L+ GSL L + + W + ++ L+YLH++
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 497 CENQ-----VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSP-DATVAAGTMGYLAP 550
C + + HRD K+ N++L A L DFGLA + E K P D GT Y+AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 551 EYL-----LTGRATEKTDVFSYGAVVLEVAS 576
E L A + D+++ G V+ E+ S
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +AVK + NS + E+ I+ L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + LV + G + L R+K + SA+ Y HQ+ ++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IV 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + D G+ Y APE L G+ +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGP 192
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGKD- 421
P F R L+ ++ +G G FG+V Y + G ++AVK+ H+ +
Sbjct: 4 PTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 56
Query: 422 EFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+F E+ I+ L +V+ +G + G + LV + +P+G L L R+ L
Sbjct: 57 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DA 113
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
S++LL + + + +HRD+ NI+++ + ++ DFGLA+ + DK
Sbjct: 114 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
Query: 540 VAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
G + + APE L + ++DV+S+G V+ E+
Sbjct: 174 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGKD- 421
P F R L+ ++ +G G FG+V Y + G ++AVK+ H+ +
Sbjct: 17 PTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 69
Query: 422 EFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+F E+ I+ L +V+ +G + G + LV + +P+G L L R+ L
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DA 126
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
S++LL + + + +HRD+ NI+++ + ++ DFGLA+ + DK
Sbjct: 127 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
Query: 540 VAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
G + + APE L + ++DV+S+G V+ E+
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +AVK + NS + E+ I+ L H N+V+L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 72
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + LV + G + L R+K + SA+ Y HQ+ ++
Sbjct: 73 EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAK-FRQIVSAVQYCHQKF---IV 128
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + D G+ Y APE L G+ +
Sbjct: 129 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGP 185
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 186 EVDVWSLGVILYTLVSGSLPFD 207
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTV----YKGILPQNGDIIAVKRCSHNSQGKD- 421
P F R L+ ++ +G G FG+V Y + G ++AVK+ H+ +
Sbjct: 5 PTIFEERHLKYISQ-------LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR 57
Query: 422 EFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPHR 479
+F E+ I+ L +V+ +G + G + LV + +P+G L L R+ L
Sbjct: 58 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL---DA 114
Query: 480 SKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDAT 539
S++LL + + + +HRD+ NI+++ + ++ DFGLA+ + DK
Sbjct: 115 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 540 VAAGT--MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
G + + APE L + ++DV+S+G V+ E+
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSI--IGTLRHRNLVRL--- 441
+IG G +G VYKG L + +AVK S + F++E +I + + H N+ R
Sbjct: 20 LIGRGRYGAVYKGSLDERP--VAVKVFSF--ANRQNFINEKNIYRVPLMEHDNIARFIVG 75
Query: 442 --QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC-- 497
+ + E LLV + PNGSL K L S W ++ V LAYLH E
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 498 ----ENQVIHRDVKTSNIMLDEGFNARLGDFGLA------RQVEHDKSPDATVA-AGTMG 546
+ + HRD+ + N+++ + DFGL+ R V + +A ++ GT+
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 547 YLAPEYLLTG-------RATEKTDVFSYGAVVLEV 574
Y+APE L A ++ D+++ G + E+
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 88/202 (43%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +AVK + NS + E+ I L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLF 79
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + LV + G + L R+K + SA+ Y HQ+ ++
Sbjct: 80 EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK-FRQIVSAVQYCHQKF---IV 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + DA G Y APE L G+ +
Sbjct: 136 HRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAF--CGAPPYAAPE-LFQGKKYDGP 192
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|E Chain E, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + + LT+ V + G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKERLTLTKAVR---NTVGRALYSSPIHIWDSKTGNVANFVTSFTFVIDA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + K VAVEFDT + + NG
Sbjct: 74 PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNG 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSN 214
+ H+G+D+NS+ S ++T + L++G N I ++G T +S++Y N
Sbjct: 134 DRHIGIDVNSIKS-----INTKSWKLQNGKEANVVIAFNGATNVLTVSLTYPN 181
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM L+ + A+ L H ++ + L Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCAK--LTDDHVQFLIYQILRGLKYIHSA-- 140
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 141 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 195
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 12/206 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS--QGKDE--FLSELSII-GTLRHR 436
F+ ++IG G+FG V AVK + + K+E +SE +++ ++H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 437 NLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
LV L ++ V D + G L L R L P +ASAL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE-PRARFYAAEIASALGYLHSL 158
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ-VEHDKSPDATVAAGTMGYLAPEYLLT 555
+++RD+K NI+LD + L DFGL ++ +EH+ + + GT YLAPE L
Sbjct: 159 ---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLHK 213
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPI 581
D + GAV+ E+ G P
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 99/214 (46%), Gaps = 22/214 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE----FLSELSIIGTLRHRN 437
F R++G G+FG V + + GD+ AVK + +D+ ++E I+ R+
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 438 LVRLQGWCHEKGEILLVY-------DLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
+ C + + L DLM + + EAR+ + ++I+ SAL
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF---YAAEII----SAL 137
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
+LH + +I+RD+K N++LD + +L DFG+ ++ + AT GT Y+AP
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF-CGTPDYIAP 193
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
E L D ++ G ++ E+ G P E E
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 45 SLKLLGDAHM-NNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXIT 103
SL GDA + +G + + D V ALY+ PV T A ++
Sbjct: 13 SLIFQGDAKIWTDGRLAMPTDPLV-NRTTSHALYATPVPIWDSATGNVASFITSFSFIVS 71
Query: 104 NLNPSSIGAGLAFVITPDGEQV--GSAGGSLGLLDEKGAGLGFVAVEFDTLMDV-EFSDI 160
N+ G+ F + P G ++ S GG LG+ D + FVAVEFD+ +V + +
Sbjct: 72 NVQRYPPTDGVVFFLAPWGTEIPPNSQGGYLGITDSSNSQNQFVAVEFDSHPNVWDPKSL 131
Query: 161 NGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVP 220
+H+G+D+NS++S L +N + SG L + I YD T+ + +++ N ++
Sbjct: 132 RSSHIGIDVNSIMS-----LKAVNWNRVSGSLEKATIIYDSDTKILTVVMTHQN--GQIT 184
Query: 221 ILSFTLDLDQYVNDFMYVGFSGST 244
+S +DL + + + VGFS +T
Sbjct: 185 TISQEIDLKTVLPEKVSVGFSATT 208
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINAMLNHEN 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 178
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 32/235 (13%)
Query: 366 MPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF-- 423
MPK Y + + F ++G GA+G V G+I+A+K+ K F
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFAL 54
Query: 424 --LSELSIIGTLRHRNLVRLQGWCHEK-----GEILLVYDLMPNGSLDKALFEARSPLPW 476
L E+ I+ +H N++ + E+ ++ +LM L + + + L
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI--STQMLSD 111
Query: 477 PHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSP 536
H + A+ LH + VIHRD+K SN++++ + ++ DFGLAR ++ +
Sbjct: 112 DHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 537 DA---------TVAAGTMGYLAPEYLLT-GRATEKTDVFSYGAVVLEVASGRRPI 581
++ T T Y APE +LT + + DV+S G ++ E+ RRPI
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +AV+ + NS + E+ I+ L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + LV + G + L R+K + SA+ Y HQ+ ++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IV 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + D G+ Y APE L G+ +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPE-LFQGKKYDGP 192
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 60 RLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGA-GLAFVI 118
+LT++ + G+ALY++P++ T A IT A GL F +
Sbjct: 35 KLTKNGVPVWKSTGRALYAEPIKIWDSTTGNVASFETRFSFNITQPYAYPEPADGLTFFM 94
Query: 119 TPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVD 178
P G GG+LG+ F AVEFDT + D H+G+D+NS+VS++
Sbjct: 95 VPPNSPQGEDGGNLGVFKPPEGDNAF-AVEFDTFQNT--WDPQVPHIGIDVNSIVSSK-- 149
Query: 179 NLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYV--NDFM 236
T++ L++G + N I+YD T+ N+ +++ ++ V LS +DL Q ++++
Sbjct: 150 ---TLHFQLENGGVANVVIKYDSPTKILNVVLAFHSVG-TVYTLSNIVDLKQEFPNSEWV 205
Query: 237 YVGFSGST---QGSTEIH 251
VG S +T + + E H
Sbjct: 206 NVGLSATTGYQKNAVETH 223
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 12/200 (6%)
Query: 50 GDAHMNN-GSVRLTRDVT-VPYDGA-GKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLN 106
GDA + + G ++LT V VP + G+ALY+ P + T A I N
Sbjct: 22 GDALVTSTGVLQLTNVVNGVPSSKSLGRALYAAPFQIWDSTTGNVASFVTSFTFIIQAPN 81
Query: 107 PSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDINGNH 164
P++ GLAF + P Q GG LG+ + VAVEFDT + ++ D G H
Sbjct: 82 PATTADGLAFFLAPVDTQPLDLGGMLGIFKDGYFNKSNQIVAVEFDTFSNGDW-DPKGRH 140
Query: 165 VGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSF 224
+G+++NS ++++ T+ + +G++ N +I Y+ T++ S+ Y +L+ I+
Sbjct: 141 LGINVNS-----IESIKTVPWNWTNGEVANVFISYEASTKSLTASLVYPSLETSF-IIDA 194
Query: 225 TLDLDQYVNDFMYVGFSGST 244
+D+ + +++ GFS +T
Sbjct: 195 IVDVKIVLPEWVRFGFSATT 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +AV+ + NS + E+ I+ L H N+V+L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLF 79
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + LV + G + L R+K + SA+ Y HQ+ ++
Sbjct: 80 EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKF---IV 135
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + D G+ Y APE L G+ +
Sbjct: 136 HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDE--FCGSPPYAAPE-LFQGKKYDGP 192
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 193 EVDVWSLGVILYTLVSGSLPFD 214
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + + LT+ V + G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKERLTLTKAVR---NTVGRALYSSPIHIWDSKTGNVANFVTSFTFVIDA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + K VAVEFDT + + NG
Sbjct: 74 PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNG 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSN 214
+ H+G+D+NS+ S ++T + L++G N I ++G T +S++Y N
Sbjct: 134 DRHIGIDVNSIKS-----INTKSWALQNGKEANVVIAFNGATNVLTVSLTYPN 181
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia))
Complex With Y Human Blood Group Determinant
pdb|1LEC|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
pdb|1LED|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
Length = 243
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 16/216 (7%)
Query: 37 DFGTLTLAS---LKLLGDAHMNNGSVRLTR---DVTVPYDGAGKALYSKPVRFRLPGTHT 90
DF + +L + + LGDA G+++LT+ + AG+A YS+PV F T
Sbjct: 10 DFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPV-FLWDSTGK 68
Query: 91 PAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAG----LGFVA 146
A + N + GLAF + P V GG LGL + A VA
Sbjct: 69 AASFYTSFTFLLKNYG-APTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVA 127
Query: 147 VEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAF 206
VEFDT ++ +++D H+G+D+NS+VS + N D + + I YD ++
Sbjct: 128 VEFDTWINKDWNDPPYPHIGIDVNSIVSVATTRWE--NDDAYGSSIATAHITYDARSKIL 185
Query: 207 NISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSG 242
+ +SY + + ILS +DL + + + +GFS
Sbjct: 186 TVLLSYEHGRDY--ILSHVVDLAKVLPQKVRIGFSA 219
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 32/235 (13%)
Query: 366 MPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF-- 423
MPK Y + + F ++G GA+G V G+I+A+K+ K F
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFAL 54
Query: 424 --LSELSIIGTLRHRNLVRLQGWCHEK-----GEILLVYDLMPNGSLDKALFEARSPLPW 476
L E+ I+ +H N++ + E+ ++ +LM L + + + L
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI--STQMLSD 111
Query: 477 PHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSP 536
H + A+ LH + VIHRD+K SN++++ + ++ DFGLAR ++ +
Sbjct: 112 DHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 537 DA---------TVAAGTMGYLAPEYLLT-GRATEKTDVFSYGAVVLEVASGRRPI 581
++ T T Y APE +LT + + DV+S G ++ E+ RRPI
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 178
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 388 IGHGAFGTVYKGIL--PQNGDIIAVKRCSH-----NSQGKDEFLSELSIIGTLRHRNLVR 440
+G G+FG V +G P + +C + D+F+ E++ + +L HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G + +V +L P GSL L + + S+ + VA + YL + +
Sbjct: 80 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 135
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQV----------EHDKSPDATVAAGTMGYLAP 550
IHRD+ N++L ++GDFGL R + EH K P A + AP
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--------WCAP 187
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
E L T + +D + +G + E+ + G+ P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 103/236 (43%), Gaps = 32/236 (13%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKRC------SHNSQGKDEFLSELSIIGTLRHRNLVR 440
+IG GAF V + I + G AVK S ++ E SI L+H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFE--ARSPLPWPHR----SKILLGVASALAYLH 494
L G + +V++ M L FE R+ + + S + + AL Y H
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 495 QECENQVIHRDVKTSNIMLDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMG---YL 548
+N +IHRDVK N++L N+ +LGDFG+A Q+ VA G +G ++
Sbjct: 148 ---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL----GESGLVAGGRVGTPHFM 200
Query: 549 APEYLLTGRATEKTDVFSYGAVVLEVASGRRPI----EKEITGVGKVGVASNLVEW 600
APE + + DV+ G ++ + SG P E+ G+ K N +W
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQW 256
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 388 IGHGAFGTVYKGIL--PQNGDIIAVKRCSH-----NSQGKDEFLSELSIIGTLRHRNLVR 440
+G G+FG V +G P + +C + D+F+ E++ + +L HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G + +V +L P GSL L + + S+ + VA + YL + +
Sbjct: 80 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 135
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQV----------EHDKSPDATVAAGTMGYLAP 550
IHRD+ N++L ++GDFGL R + EH K P A + AP
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--------WCAP 187
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
E L T + +D + +G + E+ + G+ P
Sbjct: 188 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 64
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 65 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 121 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 176
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 178
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 178
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 178
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 388 IGHGAFGTVYKGIL--PQNGDIIAVKRCSH-----NSQGKDEFLSELSIIGTLRHRNLVR 440
+G G+FG V +G P + +C + D+F+ E++ + +L HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G + +V +L P GSL L + + S+ + VA + YL + +
Sbjct: 76 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQV----------EHDKSPDATVAAGTMGYLAP 550
IHRD+ N++L ++GDFGL R + EH K P A + AP
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA--------WCAP 183
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
E L T + +D + +G + E+ + G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 178
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 388 IGHGAFGTVYKGIL--PQNGDIIAVKRCSH-----NSQGKDEFLSELSIIGTLRHRNLVR 440
+G G+FG V +G P + +C + D+F+ E++ + +L HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G + +V +L P GSL L + + S+ + VA + YL + +
Sbjct: 76 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQV----------EHDKSPDATVAAGTMGYLAP 550
IHRD+ N++L ++GDFGL R + EH K P A + AP
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--------WCAP 183
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
E L T + +D + +G + E+ + G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 178
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 388 IGHGAFGTVYKGIL--PQNGDIIAVKRCSH-----NSQGKDEFLSELSIIGTLRHRNLVR 440
+G G+FG V +G P + +C + D+F+ E++ + +L HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G + +V +L P GSL L + + S+ + VA + YL + +
Sbjct: 86 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 141
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQV----------EHDKSPDATVAAGTMGYLAP 550
IHRD+ N++L ++GDFGL R + EH K P A + AP
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--------WCAP 193
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
E L T + +D + +G + E+ + G+ P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 388 IGHGAFGTVYKGIL--PQNGDIIAVKRCSH-----NSQGKDEFLSELSIIGTLRHRNLVR 440
+G G+FG V +G P + +C + D+F+ E++ + +L HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G + +V +L P GSL L + + S+ + VA + YL + +
Sbjct: 76 LYG-VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 131
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQV----------EHDKSPDATVAAGTMGYLAP 550
IHRD+ N++L ++GDFGL R + EH K P A + AP
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFA--------WCAP 183
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
E L T + +D + +G + E+ + G+ P
Sbjct: 184 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLS---------ELSIIGTLRHRNL 438
+G GAFG V+ + + + VK +D ++ E++I+ + H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP-LPWPHRSKILLGVASALAYLHQEC 497
+++ +G LV + +G LD F R P L P S I + SA+ YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRL-- 148
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
+IHRD+K NI++ E F +L DFG A +E K GT+ Y APE L+
Sbjct: 149 -KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKL--FYTFCGTIEYCAPEVLM 202
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 140
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 141 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 195
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 388 IGHGAFGTVYKGIL--PQNGDIIAVKRCSH-----NSQGKDEFLSELSIIGTLRHRNLVR 440
+G G+FG V +G P + +C + D+F+ E++ + +L HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L G + +V +L P GSL L + + S+ + VA + YL + +
Sbjct: 86 LYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---R 141
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQV----------EHDKSPDATVAAGTMGYLAP 550
IHRD+ N++L ++GDFGL R + EH K P A + AP
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFA--------WCAP 193
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
E L T + +D + +G + E+ + G+ P
Sbjct: 194 ESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEIXINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 154
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 155 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 209
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 210 YNQTVDIWSVGCIMAELLTGR 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +A+K + N + E+ I+ L H N+V+L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + L+ + G + L RSK + SA+ Y HQ+ +++
Sbjct: 81 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK-FRQIVSAVQYCHQK---RIV 136
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + DA G Y APE L G+ +
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF--CGAPPYAAPE-LFQGKKYDGP 193
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFD 215
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNAMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
IG GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 149
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 150 -DIIHRDLKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 204
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 17/228 (7%)
Query: 376 RSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH 435
R F R+ G G FGTV G G +A+K+ + + ++ L + + L H
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH 78
Query: 436 RNLVRLQGWCHEKGE-------ILLVYDLMPNGSLDKAL--FEARSPLPWPHRSKI-LLG 485
N+V+LQ + + GE + +V + +P+ +L + + R P P K+ L
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPDATVAAGT 544
+ ++ LH N V HRD+K N++++E +L DFG A+++ + A + +
Sbjct: 138 LIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY 196
Query: 545 MGYLAPEYLLTGR-ATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKV 591
Y APE + + T D++S G + E+ G PI + G++
Sbjct: 197 --YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPIFRGDNSAGQL 241
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLVRLQGWC 445
IG G FG V++G G+ +AVK S S+ + + E I T LRH N++
Sbjct: 37 IGKGRFGEVWRG--KWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 446 HEKG----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC---- 497
++ ++ LV D +GSL L R + K+ L AS LA+LH E
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 498 -ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA-----GTMGYLAPE 551
+ + HRD+K+ NI++ + + D GLA V HD + D A GT Y+APE
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 552 YLLTG------RATEKTDVFSYGAVVLEVA 575
L + ++ D+++ G V E+A
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+ G FG V+K L + + ++E+ E+ + ++H N+++ G
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIG-AE 87
Query: 447 EKG-----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC---- 497
++G ++ L+ GSL F + + W I +A LAYLH++
Sbjct: 88 KRGTSVDVDLWLITAFHEKGSLSD--FLKANVVSWNELCHIAETMARGLAYLHEDIPGLK 145
Query: 498 ---ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSP-DATVAAGTMGYLAPEYL 553
+ + HRD+K+ N++L A + DFGLA + E KS D GT Y+APE L
Sbjct: 146 DGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL 205
Query: 554 -----LTGRATEKTDVFSYGAVVLEVAS 576
A + D+++ G V+ E+AS
Sbjct: 206 EGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 48/299 (16%)
Query: 382 FNANRIIGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL- 433
N + +G GAFG V + GI +AVK + + +SEL I+ +
Sbjct: 30 LNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 89
Query: 434 RHRNLVRLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHRS-----KILLGVA 487
H N+V L G C + G ++++ + G+L L R+ P+++ K L +
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKTPEDLYKDFLTLE 148
Query: 488 SALAYLHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV 540
+ Y Q + + IHRD+ NI+L E ++ DFGLAR + D PD
Sbjct: 149 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVR 206
Query: 541 ---AAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASN 596
A + ++APE + T ++DV+S+G ++ E+ S G P GV
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------K 255
Query: 597 LVEWVWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+ E +EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 256 IDEEFCRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 163
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 164 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 218
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 219 YNQTVDIWSVGCIMAELLTGR 239
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEIXINKMLNHEN 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE-L 178
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM L+ + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK--LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLVRLQGWC 445
IG G FG V++G G+ +AVK S S+ + + E I T LRH N++
Sbjct: 11 IGKGRFGEVWRG--KWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 446 HEKG----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC---- 497
++ ++ LV D +GSL L R + K+ L AS LA+LH E
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 498 -ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA-----GTMGYLAPE 551
+ + HRD+K+ NI++ + + D GLA V HD + D A GT Y+APE
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 552 YLLTG------RATEKTDVFSYGAVVLEVA 575
L + ++ D+++ G V E+A
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 164
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 165 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 219
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGXVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEIXINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA+G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 376 RSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--L 433
R+ + IG G FG V++G G+ +AVK S S+ + + E I T L
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFS--SREERSWFREAEIYQTVML 93
Query: 434 RHRNLVRLQGWCHEKG----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASA 489
RH N++ ++ ++ LV D +GSL L R + K+ L AS
Sbjct: 94 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASG 151
Query: 490 LAYLHQEC-----ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA-- 542
LA+LH E + + HRD+K+ NI++ + + D GLA V HD + D A
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPN 209
Query: 543 ---GTMGYLAPEYLLTG------RATEKTDVFSYGAVVLEVA 575
GT Y+APE L + ++ D+++ G V E+A
Sbjct: 210 HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 251
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLVRLQGWC 445
IG G FG V++G G+ +AVK S S+ + + E I T LRH N++
Sbjct: 12 IGKGRFGEVWRG--KWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 446 HEKG----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC---- 497
++ ++ LV D +GSL L R + K+ L AS LA+LH E
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 498 -ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA-----GTMGYLAPE 551
+ + HRD+K+ NI++ + + D GLA V HD + D A GT Y+APE
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 552 YLLTG------RATEKTDVFSYGAVVLEVA 575
L + ++ D+++ G V E+A
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 150
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 151 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMH 205
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLVRLQGWC 445
IG G FG V++G G+ +AVK S S+ + + E I T LRH N++
Sbjct: 14 IGKGRFGEVWRG--KWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 446 HEKG----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC---- 497
++ ++ LV D +GSL L R + K+ L AS LA+LH E
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 498 -ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA-----GTMGYLAPE 551
+ + HRD+K+ NI++ + + D GLA V HD + D A GT Y+APE
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 552 YLLTG------RATEKTDVFSYGAVVLEVA 575
L + ++ D+++ G V E+A
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM L+ + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKXQK--LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLVRLQGWC 445
IG G FG V++G G+ +AVK S S+ + + E I T LRH N++
Sbjct: 17 IGKGRFGEVWRG--KWRGEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 446 HEKG----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC---- 497
++ ++ LV D +GSL L R + K+ L AS LA+LH E
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 498 -ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA-----GTMGYLAPE 551
+ + HRD+K+ NI++ + + D GLA V HD + D A GT Y+APE
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 552 YLLTG------RATEKTDVFSYGAVVLEVA 575
L + ++ D+++ G V E+A
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 32/235 (13%)
Query: 366 MPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF-- 423
MPK Y + + F ++G GA+G V G+I+A+K+ K F
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--PFDKPLFAL 54
Query: 424 --LSELSIIGTLRHRNLVRLQGWCHEK-----GEILLVYDLMPNGSLDKALFEARSPLPW 476
L E+ I+ +H N++ + E+ ++ +LM L + + + L
Sbjct: 55 RTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVI--STQMLSD 111
Query: 477 PHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH---D 533
H + A+ LH + VIHRD+K SN++++ + ++ DFGLAR ++ D
Sbjct: 112 DHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 534 KSPDATVAAG------TMGYLAPEYLLT-GRATEKTDVFSYGAVVLEVASGRRPI 581
S +G T Y APE +LT + + DV+S G ++ E+ RRPI
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 149
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 150 -DIIHRDLKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 204
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
Length = 181
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + + LT+ V + G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKERLTLTKAVR---NTVGRALYSSPIHIWDSKTGNVANFVTSFTFVIDA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + K VAVEFDT + + NG
Sbjct: 74 PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNG 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSN 214
+ H+G+D+NS+ S ++T + L++G N I ++ T +S++Y N
Sbjct: 134 DRHIGIDVNSIKS-----INTKSWKLQNGKEANVVIAFNAATNVLTVSLTYPN 181
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 149
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 150 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 204
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 140
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 141 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 195
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 149
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 150 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 204
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 205 YNQTVDIWSVGCIMAELLTGR 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 141
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 142 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 196
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 197 YNQTVDIWSVGCIMAELLTGR 217
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 143
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 144 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 198
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 199 YNQTVDIWSVGCIMAELLTGR 219
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 146
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 147 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 201
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 151
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 152 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 206
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 141
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 142 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 196
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 197 YNQTVDIWSVGCIMAELLTGR 217
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 146
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 147 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 201
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 142
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 143 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 197
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 198 YNQTVDIWSVGCIMAELLTGR 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 155
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 156 -DIIHRDLKPSNLAVNEDXELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 210
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 211 YNQTVDIWSVGCIMAELLTGR 231
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 156
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 157 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 211
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 156
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 157 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 211
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 146
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 147 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 201
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 22/218 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQ-NGDII--AVKRCSHN---SQGKDEFLSELSIIGTLRH 435
F R++G G FG+V + L Q +G + AVK + S +EFL E + + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 436 RNLVRLQG---WCHEKGEI---LLVYDLMPNGSLDKALFEAR---SPLPWPHRS--KILL 484
++ +L G KG + +++ M +G L L +R +P P ++ + ++
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-EHDKSPDATVAAG 543
+A + YL IHRD+ N ML E + DFGL+R++ D +
Sbjct: 145 DIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 544 TMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRP 580
+ +LA E L T +DV+++G + E+ + G+ P
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 155
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 156 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 210
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 211 YNQTVDIWSVGCIMAELLTGR 231
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 12/206 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNL 438
+ + IG G F V G +AVK + N + E+ I+ L H N+
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L + + LV + G + L R+K + SA+ Y HQ+
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK-FRQIVSAVQYCHQKY- 134
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
++HRD+K N++LD N ++ DFG + + D G+ Y APE L G+
Sbjct: 135 --IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FCGSPPYAAPE-LFQGKK 189
Query: 559 TE--KTDVFSYGAVVLEVASGRRPIE 582
+ + DV+S G ++ + SG P +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG----------KDEFLSELSIIG 431
+ I+G G V + I AVK G ++ L E+ I+
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 432 TLR-HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
+ H N+++L+ LV+DLM G L L E + L KI+ + +
Sbjct: 66 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVI 124
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
LH+ ++HRD+K NI+LD+ N +L DFG + Q+ D GT YLAP
Sbjct: 125 CALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAP 179
Query: 551 EYLLTGRAT------EKTDVFSYGAVVLEVASGRRPI 581
E + ++ D++S G ++ + +G P
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 156
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 157 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 211
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 212 YNQTVDIWSVGCIMAELLTGR 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 167
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 168 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 222
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 223 YNQTVDIWSVGCIMAELLTGR 243
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 151
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 152 -DIIHRDLKPSNLAVNEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLNWMH 206
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 164
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 165 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 219
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 150
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 151 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 205
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG----------KDEFLSELSIIG 431
+ I+G G V + I AVK G ++ L E+ I+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 432 TLR-HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
+ H N+++L+ LV+DLM G L L E + L KI+ + +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVI 137
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
LH+ ++HRD+K NI+LD+ N +L DFG + Q+ D GT YLAP
Sbjct: 138 CALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLRSVCGTPSYLAP 192
Query: 551 EYLLTGRAT------EKTDVFSYGAVVLEVASGRRPI 581
E + ++ D++S G ++ + +G P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 163
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 164 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 218
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 219 YNQTVDIWSVGCIMAELLTGR 239
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOB|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOC|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOE|A Chain A, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOE|C Chain C, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOF|A Chain A, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
pdb|1LOG|A Chain A, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
pdb|1LOG|C Chain C, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
Length = 181
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + + LT+ V + G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKERLTLTKAVR---NTVGRALYSSPIHIWDSKTGNVANFVTSFTFVIDA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + K VAVEFDT + + NG
Sbjct: 74 PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKDYDKTSQTVAVEFDTFYNTAWDPSNG 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSN 214
+ H+G+D+NS+ S ++T + L++G N I ++ T +S++Y N
Sbjct: 134 DRHIGIDVNSIKS-----INTKSWALQNGKEANVVIAFNAATNVLTVSLTYPN 181
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 373 RELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE----FLSELS 428
R+LR + + ++IG GAFG V + A+K S K F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 429 IIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWP--HRSKILLGV 486
I+ +V+L + + +V + MP G L + P W + ++++L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL-- 184
Query: 487 ASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
AL +H IHRDVK N++LD+ + +L DFG ++ + A GT
Sbjct: 185 --ALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 547 YLAPEYLLT----GRATEKTDVFSYGAVVLEVASGRRPI 581
Y++PE L + G + D +S G + E+ G P
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRL 441
F +IG G FG V+K +G +KR +N++ + E+ + L H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER---EVKALAKLDHVNIVHY 69
Query: 442 QG-W--------------CHEKGEILLVY-DLMPNGSLDKALFEAR-SPLPWPHRSKILL 484
G W K + L + + G+L++ + + R L ++
Sbjct: 70 NGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT 544
+ + Y+H + ++I+RD+K SNI L + ++GDFGL +++D + GT
Sbjct: 130 QITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK--RXRSKGT 184
Query: 545 MGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
+ Y++PE + + ++ D+++ G ++ E+
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 151
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 152 -DIIHRDLKPSNLAVNEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLNWMH 206
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 146
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 147 -DIIHRDLKPSNLAVNEDSELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 201
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 202 YNQTVDIWSVGCIMAELLTGR 222
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 404 NGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL 463
N D I++K D+F +EL II +++ + +G E+ ++Y+ M N S+
Sbjct: 77 NNDKISIK------SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI 130
Query: 464 ---DKALF----EARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEG 516
D+ F +P I+ V ++ +Y+H E + HRDVK SNI++D+
Sbjct: 131 LKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKN 188
Query: 517 FNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE--KTDVFSYGAVVLEV 574
+L DFG + E+ + GT ++ PE+ + K D++S G + +
Sbjct: 189 GRVKLSDFG---ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVM 245
Query: 575 ASGRRPIEKEITGV 588
P +I+ V
Sbjct: 246 FYNVVPFSLKISLV 259
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 151
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 152 -DIIHRDLKPSNLAVNEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLNWMH 206
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 207 YNQTVDIWSVGCIMAELLTGR 227
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 23/217 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG----------KDEFLSELSIIG 431
+ I+G G V + I AVK G ++ L E+ I+
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 432 TLR-HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
+ H N+++L+ LV+DLM G L L E + L KI+ + +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE-KVTLSEKETRKIMRALLEVI 137
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
LH+ ++HRD+K NI+LD+ N +L DFG + Q+ D GT YLAP
Sbjct: 138 CALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAP 192
Query: 551 EYLLTGRAT------EKTDVFSYGAVVLEVASGRRPI 581
E + ++ D++S G ++ + +G P
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 150
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 151 -DIIHRDLKPSNLAVNEDSELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 205
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 150
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 151 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMH 205
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 206 YNQTVDIWSVGCIMAELLTGR 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 164
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR D VA T Y APE +L
Sbjct: 165 -DIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGXVA--TRWYRAPEIMLNWMH 219
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 220 YNQTVDIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 140
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + + T Y APE +L
Sbjct: 141 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWMH 195
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 196 YNQTVDIWSVGCIMAELLTGR 216
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 373 RELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE----FLSELS 428
R+LR + + ++IG GAFG V + A+K S K F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 429 IIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWP--HRSKILLGV 486
I+ +V+L + + +V + MP G L + P W + ++++L
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL-- 184
Query: 487 ASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
AL +H IHRDVK N++LD+ + +L DFG ++ + A GT
Sbjct: 185 --ALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 547 YLAPEYLLT----GRATEKTDVFSYGAVVLEVASGRRPI 581
Y++PE L + G + D +S G + E+ G P
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 93/219 (42%), Gaps = 17/219 (7%)
Query: 373 RELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE----FLSELS 428
R+LR + + ++IG GAFG V + A+K S K F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 429 IIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWP--HRSKILLGV 486
I+ +V+L + + +V + MP G L + P W + ++++L
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL-- 179
Query: 487 ASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
AL +H IHRDVK N++LD+ + +L DFG ++ + A GT
Sbjct: 180 --ALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
Query: 547 YLAPEYLLT----GRATEKTDVFSYGAVVLEVASGRRPI 581
Y++PE L + G + D +S G + E+ G P
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + + T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + + T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK---RCSHNSQGKDEFLSELSIIGTLRHRNLVRLQ 442
+ IG G F V G +A+K + N + E+ I+ L H N+V+L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 77
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + L+ + G + L RSK + SA+ Y HQ+ +++
Sbjct: 78 EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK-FRQIVSAVQYCHQK---RIV 133
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATE-- 560
HRD+K N++LD N ++ DFG + + D G+ Y APE L G+ +
Sbjct: 134 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAPE-LFQGKKYDGP 190
Query: 561 KTDVFSYGAVVLEVASGRRPIE 582
+ DV+S G ++ + SG P +
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFD 212
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 20/211 (9%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRL 441
F +G GA VY+ A+K + K +E+ ++ L H N+++L
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALK-VLKKTVDKKIVRTEIGVLLRLSHPNIIKL 113
Query: 442 QGWCHEKGEILLVYDLMPNGSL-----DKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+ EI LV +L+ G L +K + R + + + A+AYLH
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDA------ADAVKQILEAVAYLH-- 165
Query: 497 CENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
EN ++HRD+K N++ ++ DFGL++ VEH GT GY APE L
Sbjct: 166 -ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL--MKTVCGTPGYCAPEIL 222
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIEKE 584
+ D++S G + + G P E
Sbjct: 223 RGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF----LSELSIIGTLRHRNLVRLQG 443
+G G+FG V + +A+K S K + E+S + LRH ++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 444 WCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
+I++V + G L + E + + + + A+ Y H+ ++++H
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCHR---HKIVH 131
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR--ATEK 561
RD+K N++LD+ N ++ DFGL+ + D + T + G+ Y APE ++ G+ A +
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKT-SCGSPNYAAPE-VINGKLYAGPE 188
Query: 562 TDVFSYGAVVLEVASGRRPIEKE 584
DV+S G V+ + GR P + E
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 30/224 (13%)
Query: 45 SLKLLGDAHMN-NGSVRLTRDVTVPYDGA------GKALYSKPVRFRLPGTHTPAXXXXX 97
+L GDAH + N ++LTR +GA G+ L+S VR T+ A
Sbjct: 25 NLIFQGDAHTSRNNILQLTR---TDSNGAPVRSTVGRILHSAQVRLWEKSTNRVANLQTQ 81
Query: 98 XXXXITN--LNPSSIGAGLAFVITPDGEQV--GSAGGSLGLLDEKGA----GLGFVAVEF 149
+++ NP+ G+AF I P + GSAGG LGL + + A +AVEF
Sbjct: 82 FSFFLSSPLSNPAD---GIAFFIAPPDTTIPSGSAGGLLGLFNPRTALNESANQVLAVEF 138
Query: 150 DTLM--DVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFN 207
DT + D N H+G+D+NS+ S++V + + + G +N + Y+ TR +
Sbjct: 139 DTFFAQNSNTWDPNYQHIGIDVNSIRSSKV-----VRWERREGKTLNVLVTYNPSTRTID 193
Query: 208 ISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQGSTEIH 251
+ +Y + + LS +DL + +++ VGFS ++ + H
Sbjct: 194 VVATYPDGQRYQ--LSHVVDLTTILPEWVRVGFSAASGEQFQTH 235
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL- 441
R +G GA+G+V + +AVK+ S Q EL ++ L+H N++ L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 442 -----QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+ E+ LV LM G+ + + ++ L H ++ + L Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSA 142
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+IHRD+K SN+ ++E R+ DFGLARQ + + T T Y APE +L
Sbjct: 143 G---IIHRDLKPSNVAVNEDCELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNW 195
Query: 557 RATEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ G+
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL- 441
R +G GA+G+V + +AVK+ S Q EL ++ L+H N++ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 442 -----QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+ E+ LV LM G+ + ++++ L H ++ + L Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSA 150
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+IHRD+K SN+ ++E R+ DFGLARQ + + T T Y APE +L
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNW 203
Query: 557 RATEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRL 441
F +IG G FG V+K +G ++R +N++ + E+ + L H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER---EVKALAKLDHVNIVHY 70
Query: 442 QG-W---------------------------CHEKGEILLVY-DLMPNGSLDKALFEAR- 471
G W K + L + + G+L++ + + R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 472 SPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVE 531
L ++ + + Y+H + ++IHRD+K SNI L + ++GDFGL ++
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 532 HDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
+D T + GT+ Y++PE + + ++ D+++ G ++ E+
Sbjct: 188 NDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 91/212 (42%), Gaps = 28/212 (13%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVK--------RCSHNSQGKDEFLSELSIIGTLRHRN 437
+ +G GA G V + + +AVK C N + E+ I L H N
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK------KEICINKMLNHEN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSP---LPWPHRSKILLGVASALAYLH 494
+V+ G E L + G L F+ P +P P + + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 495 QECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPD-ATVAAGTMGYLAPEYL 553
+ HRD+K N++LDE N ++ DFGLA ++ GT+ Y+APE L
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE-L 177
Query: 554 LTGRA--TEKTDVFSYGAVVLEVASGRRPIEK 583
L R E DV+S G V+ + +G P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V ++G IAVK+ S Q EL ++ ++H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 173
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR + + T T Y APE +L
Sbjct: 174 -DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 228
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
T D++S G ++ E+ +GR
Sbjct: 229 YNMTVDIWSVGCIMAELLTGR 249
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ D+GLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDYGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM L+ + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIVKSQK--LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGL R + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 477 PHRS-KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
P R+ +++ AL + HQ N +IHRDVK +NIM+ ++ DFG+AR + +
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 536 PDATVAA--GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
AA GT YL+PE ++DV+S G V+ EV +G P TG V V
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSV 227
Query: 594 A 594
A
Sbjct: 228 A 228
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 53/295 (17%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL--------------L 484
L G C + G ++++ + G+L L R+ P++ + L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKPEDLYKDFLTLEHLIXYSF 155
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---A 541
VA + +L + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 156 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGDA 210
Query: 542 AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEW 600
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEE 259
Query: 601 VWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 260 FCRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 477 PHRS-KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
P R+ +++ AL + HQ N +IHRDVK +NIM+ ++ DFG+AR + +
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 536 PDATVAA--GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
AA GT YL+PE ++DV+S G V+ EV +G P TG V V
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSV 227
Query: 594 A 594
A
Sbjct: 228 A 228
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL- 441
R +G GA+G+V + +AVK+ S Q EL ++ L+H N++ L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 442 -----QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+ E+ LV LM G+ + + ++ L H ++ + L Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSA 150
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+IHRD+K SN+ ++E R+ DFGLARQ + + T T Y APE +L
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLARQADE----EMTGYVATRWYRAPEIMLNW 203
Query: 557 RATEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 167
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DFGLAR D VA T Y APE +L
Sbjct: 168 -DIIHRDLKPSNLAVNEDCELKILDFGLARHT--DDEMXGYVA--TRWYRAPEIMLNWMH 222
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 223 YNQTVDIWSVGCIMAELLTGR 243
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 477 PHRS-KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
P R+ +++ AL + HQ N +IHRDVK +NIM+ ++ DFG+AR + +
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 536 PDATVAA--GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
AA GT YL+PE ++DV+S G V+ EV +G P TG V V
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSV 227
Query: 594 A 594
A
Sbjct: 228 A 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 83
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 142
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 143 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F + IG G+FG V Y + ++ +K+ H L+E I+
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRIL 95
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
+ LV+L+ + + +V + MP G + L PH +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLTF 154
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
YLH +I+RD+K N+++D+ ++ DFG A++V+ GT YLAP
Sbjct: 155 EYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAP 207
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
E +L+ + D ++ G ++ E+A+G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F + IG G+FG V Y + ++ +K+ H L+E I+
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRIL 95
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
+ LV+L+ + + +V + MP G + L PH +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL-RRIGRFSEPHARFYAAQIVLTF 154
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
YLH +I+RD+K N+++D+ ++ DFG A++V+ GT YLAP
Sbjct: 155 EYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAP 207
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
E +L+ + D ++ G ++ E+A+G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 477 PHRS-KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
P R+ +++ AL + HQ N +IHRDVK +NIM+ ++ DFG+AR + +
Sbjct: 132 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 536 PDATVAA--GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
AA GT YL+PE ++DV+S G V+ EV +G P TG V V
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSV 244
Query: 594 A 594
A
Sbjct: 245 A 245
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 68
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 69 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 127
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 128 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 8/172 (4%)
Query: 73 GKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSL 132
G+ALYS P+ T + A + + GLAF + P + + G L
Sbjct: 49 GRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYL 108
Query: 133 GLLDEKGAGLGFVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDL 192
GL +E +G VAVEFDT + D H+G+++NS+ S + T + DL + +
Sbjct: 109 GLFNENESGDQVVAVEFDTFRNSW--DPPNPHIGINVNSIRS-----IKTTSWDLANNKV 161
Query: 193 VNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST 244
I YD T S+ Y + + ILS +DL + +++ +GFS +T
Sbjct: 162 AKVLITYDASTSLLVASLVYPSQRTSN-ILSDVVDLKTSLPEWVRIGFSAAT 212
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 81/173 (46%), Gaps = 27/173 (15%)
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGT- 544
VA + +L + IHRD+ NI+L E ++ DFGLAR + K+PD T
Sbjct: 208 VARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIY--KNPDYVRKGDTR 262
Query: 545 --MGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVW 602
+ ++APE + + K+DV+SYG ++ E+ S + G GV + E
Sbjct: 263 LPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS--------LGGSPYPGV--QMDEDFC 312
Query: 603 SLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
S REG + A ++ E+ +++ L C H DP RP +V+ L
Sbjct: 313 SRLREGMRMRAP------EYSTPEIYQIM---LDCWHRDPKERPRFAELVEKL 356
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 91
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 92 SRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 150
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 151 EYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 208 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ-GKDEF---LSELSIIGTLRHRN 437
F+ +++G G FG V G A+K KDE ++E ++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHS- 123
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V++RD+K N+MLD+ + ++ DFGL ++ D + T GT YLAPE L
Sbjct: 124 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-CGTPEYLAPEVLEDN 180
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 61
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 120
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 121 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ-GKDEF---LSELSIIGTLRHRN 437
F+ +++G G FG V G A+K KDE ++E ++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHS- 123
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V++RD+K N+MLD+ + ++ DFGL ++ D + T GT YLAPE L
Sbjct: 124 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-CGTPEYLAPEVLEDN 180
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKDEF---LSELSIIGTLRHRN 437
F +++G G FG V G A+K KDE L+E ++ RH
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 212
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 213 LTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLH-- 268
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
E V++RD+K N+MLD+ + ++ DFGL ++ D + T GT YLAPE L
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-CGTPEYLAPEVLEDN 327
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 10/205 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKDEF---LSELSIIGTLRHRN 437
F +++G G FG V G A+K KDE L+E ++ RH
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 209
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 210 LTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLH-- 265
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
E V++RD+K N+MLD+ + ++ DFGL ++ D + T GT YLAPE L
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTF-CGTPEYLAPEVLEDN 324
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 86
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 145
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 83
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 142
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 143 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 84
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 143
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|2LTN|C Chain C, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|1BQP|A Chain A, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1BQP|C Chain C, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1HKD|A Chain A, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
pdb|1HKD|C Chain C, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
Length = 181
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + + LT+ V + G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKEKLTLTKAVK---NTVGRALYSSPIHIWDRETGNVANFVTSFTFVINA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLD--EKGAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + E VAVEFDT + + N
Sbjct: 74 PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSNR 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSN 214
+ H+G+D+NS+ S ++T + L++G+ N I ++ T +S++Y N
Sbjct: 134 DRHIGIDVNSIKS-----VNTKSWKLQNGEEANVVIAFNAATNVLTVSLTYPN 181
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 62
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 121
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 122 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 373 RELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDE----FLSELS 428
R L+ + ++ ++IG GAFG V + + A+K S K F E
Sbjct: 68 RGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERD 127
Query: 429 IIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWP--HRSKILLGV 486
I+ +V+L + + +V + MP G L + P W + ++++L
Sbjct: 128 IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVL-- 185
Query: 487 ASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
AL +H +IHRDVK N++LD+ + +L DFG +++ A GT
Sbjct: 186 --ALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD 240
Query: 547 YLAPEYLLT----GRATEKTDVFSYGAVVLEVASGRRPI 581
Y++PE L + G + D +S G + E+ G P
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ DF LAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDFYLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHR------SKILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICY 144
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGDAR 202
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 251
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 252 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 84
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 143
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHR------SKILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICY 153
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGDAR 211
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 260
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 261 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 84
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 85 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 143
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 144 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ-GKDEF---LSELSIIGTLRHRN 437
F+ +++G G FG V G A+K KDE ++E ++ RH
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHS- 126
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V++RD+K N+MLD+ + ++ DFGL ++ D + T GT YLAPE L
Sbjct: 127 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTF-CGTPEYLAPEVLEDN 183
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 86
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 145
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 63
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 122
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 123 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 86
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSAL 145
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A++ +D+++ G ++ ++ +G P
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex
pdb|1OFS|C Chain C, Pea Lectin-sucrose Complex
Length = 187
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + + LT+ V + G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKEKLTLTKAVK---NTVGRALYSSPIHIWDRETGNVANFVTSFTFVINA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLD--EKGAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + E VAVEFDT + + N
Sbjct: 74 PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSNR 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSN 214
+ H+G+D+NS+ S ++T + L++G+ N I ++ T +S++Y N
Sbjct: 134 DRHIGIDVNSIKS-----VNTKSWKLQNGEEANVVIAFNAATNVLTVSLTYPN 181
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 89
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 90 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 148
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 149 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 86
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 145
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHR------SKILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICY 144
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGDAR 202
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 251
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 252 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 86
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 145
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 110/265 (41%), Gaps = 29/265 (10%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRC-SHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G GAFG V++ + G + K + K +E+SI+ L H L+ L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 447 EKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQEC-------E 498
+K E++L+ + + G L D+ E + A + Y+ Q C E
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYK-----------MSEAEVINYMRQACEGLKHMHE 167
Query: 499 NQVIHRDVKTSNIMLD--EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+ ++H D+K NIM + + + ++ DFGLA ++ D+ T A T + APE +
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA--TAEFAAPEIVDRE 225
Query: 557 RATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADA 616
TD+++ G + + SG P G + N+ W + + +A
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSP----FAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA 281
Query: 617 R-LEGQFDEAEMRRVLLVGLACSHP 640
+ + E R+ L V A HP
Sbjct: 282 KDFIKNLLQKEPRKRLTVHDALEHP 306
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 86
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 145
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 146 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 12/137 (8%)
Query: 451 ILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSN 510
+ LV+DLM G L L E + L I+ + A+++LH N ++HRD+K N
Sbjct: 175 MFLVFDLMRKGELFDYLTE-KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPEN 230
Query: 511 IMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT------EKTDV 564
I+LD+ RL DFG + +E + GT GYLAPE L ++ D+
Sbjct: 231 ILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDL 288
Query: 565 FSYGAVVLEVASGRRPI 581
++ G ++ + +G P
Sbjct: 289 WACGVILFTLLAGSPPF 305
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 64
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 123
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 124 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 31/226 (13%)
Query: 367 PKEFSYRELRSATKCFNANRI--IGHGAFGTVYKGILPQNGDIIAVKRC--SHNSQG-KD 421
P S SAT RI +G G +G VYK I + +A+KR H +G
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 422 EFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSK 481
+ E+S++ L+HRN++ L+ H + L+++ N K + +
Sbjct: 79 TAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDL--KKYMDKNPDVSMRVIKS 136
Query: 482 ILLGVASALAYLHQECENQVIHRDVKTSNIML-----DEGFNARLGDFGLA-------RQ 529
L + + + + H + +HRD+K N++L E ++GDFGLA RQ
Sbjct: 137 FLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 530 VEHDKSPDATVAAGTMGYLAPEYLLTGR-ATEKTDVFSYGAVVLEV 574
H+ T+ Y PE LL R + D++S + E+
Sbjct: 194 FTHE--------IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHR------SKILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICY 153
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDXVRKGDAR 211
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 260
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 261 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 477 PHRS-KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
P R+ +++ AL + HQ N +IHRDVK +NIM+ ++ DFG+AR + +
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 536 PDATVAA--GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
AA GT YL+PE ++DV+S G V+ EV +G P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|2LAL|C Chain C, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|1LEM|A Chain A, The Monosaccharide Binding Site Of Lentil Lectin: An X-Ray
And Molecular Modelling Study
pdb|1LEN|A Chain A, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LEN|C Chain C, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LES|A Chain A, Lentil Lectin Complexed With Sucrose
pdb|1LES|C Chain C, Lentil Lectin Complexed With Sucrose
Length = 181
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + G + LT+ V G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKGKLTLTKAVK---STVGRALYSTPIHIWDRDTGNVANFVTSFTFVIDA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDING 162
+ ++ G F I P + + GG LG+ + K VAVEFDT + + N
Sbjct: 74 PSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAWDPSNK 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSN 214
H+G+D+NS+ S ++T + +L++G+ N I ++ T ++++Y N
Sbjct: 134 ERHIGIDVNSIKS-----VNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPN 181
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 87
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 146
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHRS------KILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKEAPEDLYKDFLTLEHLICY 155
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 156 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 213
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 262
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 263 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 307
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKDEF---LSELSIIGTLRHRN 437
F +++G G FG V G A+K KDE L+E ++ RH
Sbjct: 10 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 69
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 70 LTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLH-- 125
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
E V++RD+K N+MLD+ + ++ DFGL ++ D + GT YLAPE L
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT-MKXFCGTPEYLAPEVLEDN 184
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 185 DYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKDEF---LSELSIIGTLRHRN 437
F +++G G FG V G A+K KDE L+E ++ RH
Sbjct: 11 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 70
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 71 LTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLH-- 126
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
E V++RD+K N+MLD+ + ++ DFGL ++ D + GT YLAPE L
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT-MKXFCGTPEYLAPEVLEDN 185
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH------ 435
F+ R+IG G++ V L + I A+K DE ++ + T +H
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE---DIDWVQTEKHVFEQAS 63
Query: 436 --RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
LV L + + V + + G L + R LP H ++ AL YL
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYL 122
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA-AGTMGYLAPEY 552
H E +I+RD+K N++LD + +L D+G+ + E + D T GT Y+APE
Sbjct: 123 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEI 177
Query: 553 LLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
L D ++ G ++ E+ +GR P +
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKDEF---LSELSIIGTLRHRN 437
F +++G G FG V G A+K KDE L+E ++ RH
Sbjct: 12 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPF 71
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 72 LTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALDYLH-- 127
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
E V++RD+K N+MLD+ + ++ DFGL ++ D + GT YLAPE L
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT-MKXFCGTPEYLAPEVLEDN 186
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH------ 435
F+ R+IG G++ V L + I A+K DE ++ + T +H
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE---DIDWVQTEKHVFEQAS 78
Query: 436 --RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
LV L + + V + + G L + R LP H ++ AL YL
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYL 137
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA-AGTMGYLAPEY 552
H E +I+RD+K N++LD + +L D+G+ + E + D T GT Y+APE
Sbjct: 138 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEI 192
Query: 553 LLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
L D ++ G ++ E+ +GR P +
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGT 544
+ SAL YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 545 MGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
Y++PE L A + +D+++ G ++ ++ +G P
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHR------SKILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICY 144
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 202
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 251
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 252 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F +I+G G+F TV Y + + II + + ++ +D ++
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-------VM 87
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
L H V+L + ++ NG L K + + S R + SAL
Sbjct: 88 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSAL 146
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHD-KSPDATVAAGTMGYLA 549
YLH + +IHRD+K NI+L+E + ++ DFG A+ + + K A GT Y++
Sbjct: 147 EYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
PE L A + +D+++ G ++ ++ +G P
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHR------SKILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICY 190
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 248
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 297
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 298 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 342
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHR------SKILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICY 153
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 211
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 260
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 261 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 127/294 (43%), Gaps = 49/294 (16%)
Query: 388 IGHGAFGTVYK----GI-LPQNGDIIAVKRCSHNSQGKDE--FLSELSIIGTL-RHRNLV 439
+G GAFG V + GI +AVK + + +SEL I+ + H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 440 RLQGWCHEKG-EILLVYDLMPNGSLDKALFEARSPLPWPHR------SKILLGVASALAY 492
L G C + G ++++ + G+L L R+ P++ K L + + Y
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFV-PYKVAPEDLYKDFLTLEHLICY 144
Query: 493 LHQECE-------NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
Q + + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 202
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 251
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 252 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 296
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH------ 435
F+ R+IG G++ V L + I A+K DE ++ + T +H
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE---DIDWVQTEKHVFEQAS 67
Query: 436 --RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
LV L + + V + + G L + R LP H ++ AL YL
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYL 126
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA-AGTMGYLAPEY 552
H E +I+RD+K N++LD + +L D+G+ + E + D T GT Y+APE
Sbjct: 127 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEI 181
Query: 553 LLTGRATEKTDVFSYGAVVLEVASGRRPIE 582
L D ++ G ++ E+ +GR P +
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG--DIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLV 439
F R +G GAFG V+ +G +I + ++ +E+ ++ +L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 440 RLQGWCHEKGEILLVYDLMPNGSLDKALFEARS---PLPWPHRSKILLGVASALAYLHQE 496
++ + + +V + G L + + A++ L + ++++ + +ALAY H +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 497 CENQVIHRDVKTSNIMLDEG---FNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
V+H+D+K NI+ + ++ DFGLA + D+ +T AAGT Y+APE +
Sbjct: 144 ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPE-V 197
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPI 581
T K D++S G V+ + +G P
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 477 PHRS-KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS 535
P R+ +++ AL + HQ N +IHRDVK +NI++ ++ DFG+AR + +
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGN 171
Query: 536 PDATVAA--GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGV 593
AA GT YL+PE ++DV+S G V+ EV +G P TG V V
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSV 227
Query: 594 A 594
A
Sbjct: 228 A 228
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 73 GKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQV--GSAGG 130
G+ALY+ PVR T + A + NP GLAF + P Q+ GS
Sbjct: 48 GRALYAAPVRIWGNTTGSVASFSTSFTFVVKAPNPDITSDGLAFYLAPPDSQIPSGSVSK 107
Query: 131 SLGLLDEKGAGLG--FVAVEFDTLMDVEFS--DINGNHVGLDLNSMVSTEVDNLDTINVD 186
LGL + + VAVEFDT + D N H+G+D+N ++++ T+ D
Sbjct: 108 YLGLFNNSNSDSSNQIVAVEFDTYFAHSYDPWDPNYRHIGIDVNG-----IESIKTVQWD 162
Query: 187 LKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQG 246
+G + + I Y + S+ Y + + + + ++DL + + +++ VGFS +T
Sbjct: 163 WINGGVAFATITYLAPNKTLIASLVYPSNQTTFSVAA-SVDLKEILPEWVRVGFSAATGY 221
Query: 247 STEIH 251
TE+
Sbjct: 222 PTEVE 226
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 16/244 (6%)
Query: 356 SESFTSDIIRM--PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRC 413
+ + +D ++ P +E+R F ++IG GAF V + Q G + A+K
Sbjct: 35 QDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIM 94
Query: 414 SHNSQGKDE----FLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE 469
+ K F E ++ R + +L ++ + LV + G L L +
Sbjct: 95 NKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK 154
Query: 470 ARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ 529
+P L + A+ +H+ +HRD+K NI+LD + RL DFG +
Sbjct: 155 FGERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211
Query: 530 VEHDKSPDATVAAGTMGYLAPEYL-------LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
+ D + + VA GT YL+PE L TG + D ++ G E+ G+ P
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
Query: 583 KEIT 586
+ T
Sbjct: 272 ADST 275
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 54/222 (24%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLV------ 439
+G G +G V++G G+ +AVK S S+ + + E + T LRH N++
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 440 ------RLQGWC----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASA 489
Q W HE G + YD + +LD S L +I+L +AS
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSL---YDYLQLTTLDTV-----SCL------RIVLSIASG 117
Query: 490 LAYLHQEC-----ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDA-----T 539
LA+LH E + + HRD+K+ NI++ + + D GLA V H +S +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNN 175
Query: 540 VAAGTMGYLAPEYLLTG------RATEKTDVFSYGAVVLEVA 575
GT Y+APE L + ++ D++++G V+ EVA
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI---QMELDHERMSYLLYQML 129
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 130 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 184
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ FGLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILGFGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ-GKDEF---LSELSIIGTLRHRN 437
F+ +++G G FG V G A+K KDE ++E ++ RH
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHS- 128
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V++RD+K N+MLD+ + ++ DFGL ++ D + GT YLAPE L
Sbjct: 129 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-MKXFCGTPEYLAPEVLEDN 185
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 54/222 (24%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLV------ 439
+G G +G V++G G+ +AVK S S+ + + E + T LRH N++
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 440 ------RLQGWC----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASA 489
Q W HE G + YD + +LD S L +I+L +AS
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSL---YDYLQLTTLDTV-----SCL------RIVLSIASG 117
Query: 490 LAYLHQEC-----ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDA-----T 539
LA+LH E + + HRD+K+ NI++ + + D GLA V H +S +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNN 175
Query: 540 VAAGTMGYLAPEYLLTG------RATEKTDVFSYGAVVLEVA 575
GT Y+APE L + ++ D++++G V+ EVA
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ D GLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDAGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ-GKDEF---LSELSIIGTLRHRN 437
F+ +++G G FG V G A+K KDE ++E ++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHS- 123
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V++RD+K N+MLD+ + ++ DFGL ++ D + GT YLAPE L
Sbjct: 124 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-MKXFCGTPEYLAPEVLEDN 180
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + P G + L PH + YLH
Sbjct: 105 VKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+M+D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 101/229 (44%), Gaps = 58/229 (25%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--LRHRNLVRL---- 441
+G G +G V++G+ +G+ +AVK S S+ + + E I T LRH N++
Sbjct: 16 VGKGRYGEVWRGLW--HGESVAVKIFS--SRDEQSWFRETEIYNTVLLRHDNILGFIASD 71
Query: 442 --------QGWC----HEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS-KILLGVAS 488
Q W HE G + YD + +L+ PH + ++ + A
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSL---YDFLQRQTLE------------PHLALRLAVSAAC 116
Query: 489 ALAYLHQEC-----ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDA----- 538
LA+LH E + + HRD K+ N+++ + D GLA V H + D
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA--VMHSQGSDYLDIGN 174
Query: 539 TVAAGTMGYLAPEYLLTGRATE------KTDVFSYGAVVLEVASGRRPI 581
GT Y+APE L T+ TD++++G V+ E+A RR I
Sbjct: 175 NPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA--RRTI 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 382 FNANRIIGHGAFGTV-----------YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSII 430
F + IG G+FG V Y + ++ +K+ H L+E I+
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRIL 95
Query: 431 GTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASAL 490
+ LV+L+ + + +V + +P G + L PH +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTF 154
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
YLH +I+RD+K N+++D+ ++ DFG A++V+ GT YLAP
Sbjct: 155 EYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAP 207
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
E +L+ + D ++ G ++ E+A+G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F + +G G+FG V + G+ A+K K + L+E I+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + P G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+M+D+ ++ DFGLA++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ D GLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDRGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 137
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 138 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 56/244 (22%)
Query: 376 RSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--L 433
R+ + +G G +G V++G G+ +AVK S S+ + + E + T L
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRG--SWQGENVAVKIFS--SRDEKSWFRETELYNTVML 88
Query: 434 RHRNLVRL------------QGWC----HEKGEILLVYDLMPNGSLDKALFEARSPLPWP 477
RH N++ Q W HE G + YD + +LD S L
Sbjct: 89 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSL---YDYLQLTTLDTV-----SCL--- 137
Query: 478 HRSKILLGVASALAYLHQEC-----ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEH 532
+I+L +AS LA+LH E + + HRD+K+ NI++ + + D GLA V H
Sbjct: 138 ---RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--VMH 192
Query: 533 DKSPDA-----TVAAGTMGYLAPEYLLTG------RATEKTDVFSYGAVVLEVASGRRPI 581
+S + GT Y+APE L + ++ D++++G V+ EVA RR +
Sbjct: 193 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMV 250
Query: 582 EKEI 585
I
Sbjct: 251 SNGI 254
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRH------ 435
F+ R+IG G++ V L + I A++ DE ++ + T +H
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE---DIDWVQTEKHVFEQAS 110
Query: 436 --RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYL 493
LV L + + V + + G L + R LP H ++ AL YL
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYL 169
Query: 494 HQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
H E +I+RD+K N++LD + +L D+G+ ++ +T GT Y+APE L
Sbjct: 170 H---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTF-CGTPNYIAPEIL 225
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPIE 582
D ++ G ++ E+ +GR P +
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ-GKDEF---LSELSIIGTLRHRN 437
F+ +++G G FG V G A+K KDE ++E ++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHS- 123
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V++RD+K N+MLD+ + ++ DFGL ++ D + GT YLAPE L
Sbjct: 124 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-MKXFCGTPEYLAPEVLEDN 180
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQ-GKDEF---LSELSIIGTLRHRN 437
F+ +++G G FG V G A+K KDE ++E ++ RH
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKIL-LGVASALAYLHQE 496
L L+ + V + G L L +R + R++ + SAL YLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHS- 123
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
V++RD+K N+MLD+ + ++ DFGL ++ D + GT YLAPE L
Sbjct: 124 --RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT-MKXFCGTPEYLAPEVLEDN 180
Query: 557 RATEKTDVFSYGAVVLEVASGRRPI 581
D + G V+ E+ GR P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKD---EFLSELSIIGTLRHRNLVRLQG 443
+G G FG V G G +AVK + + D + E+ + RH ++++L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 444 WCHEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+I +V + + G L D R L ++ + S + Y H+ + V+
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHR---HMVV 138
Query: 503 HRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR--ATE 560
HRD+K N++LD NA++ DFGL+ + + + G+ Y APE +++GR A
Sbjct: 139 HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRXSCGSPNYAAPE-VISGRLYAGP 195
Query: 561 KTDVFSYGAVVLEVASGRRPIEKE 584
+ D++S G ++ + G P + +
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDDD 219
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNLVRLQGW 444
+G GA+G V + + G +A+K+ Q + EL ++ +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD- 91
Query: 445 CHEKGEILL----VYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
E L Y +MP D L ++ + L Y+H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG--- 148
Query: 501 VIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG-RAT 559
+IHRD+K N+ ++E ++ DFGLARQ + + T Y APE +L R T
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVILNWMRYT 204
Query: 560 EKTDVFSYGAVVLEVASGR 578
+ D++S G ++ E+ +G+
Sbjct: 205 QTVDIWSVGCIMAEMITGK 223
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 20/201 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRL--- 441
+G GA+G+V + G +AVK+ S Q EL ++ ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
E ++ LV LM G+ + + + L H ++ + L Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLM--GADLNNIVKCQK-LTDDHVQFLIYQILRGLKYIHSA-- 144
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SN+ ++E ++ D GLAR + + T T Y APE +L
Sbjct: 145 -DIIHRDLKPSNLAVNEDCELKILDGGLARHTDD----EMTGYVATRWYRAPEIMLNWMH 199
Query: 559 TEKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +GR
Sbjct: 200 YNQTVDIWSVGCIMAELLTGR 220
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+M+D+ ++ DFGLA++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1FX5|B Chain B, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1JXN|A Chain A, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|B Chain B, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|C Chain C, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|D Chain D, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
Length = 242
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%)
Query: 103 TNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGF--VAVEFDTL-MDVEFSD 159
T+ NP + GL F + P + AGG GL ++ + VAVEFDT+ V F D
Sbjct: 78 TSANPKAATDGLTFFLAPPDSPLRRAGGYFGLFNDTKCDSSYQTVAVEFDTIGSPVNFWD 137
Query: 160 INGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKV 219
H+G+D+N + S N + N ++ N I Y+ ++ S++Y + + +
Sbjct: 138 PGFPHIGIDVNCVKSI---NAERWNKRYGLNNVANVEIIYEASSKTLTASLTYPSDQTSI 194
Query: 220 PILSFTLDLDQYVNDFMYVGFSGST 244
+ S +DL + + +++ VGFSGST
Sbjct: 195 SVTSI-VDLKEILPEWVSVGFSGST 218
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 32/221 (14%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS--HNSQGKDEFLSELSIIGTLRHRNLV 439
F + +G G FG V++ + A+KR + +++ + E+ + L H +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 440 R-LQGWCHE-----------KGEILLVYDLMPNGSLDKALFEARSPLPWPHRS---KILL 484
R W + K + + L +L K R + RS I L
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENL-KDWMNGRCTIEERERSVCLHIFL 125
Query: 485 GVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVA--- 541
+A A+ +LH + ++HRD+K SNI ++GDFGL ++ D+ +
Sbjct: 126 QIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 542 --------AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEV 574
GT Y++PE + + K D+FS G ++ E+
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+M+D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 11/195 (5%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG---KDEFLSELSIIGTLRHRNLVRLQGW 444
IG G++G V+K G I+A+K+ + K L E+ ++ L+H NLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 445 CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHR 504
K + LV++ + L + L + +P I A+ + H+ + IHR
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE-LDRYQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHR 126
Query: 505 DVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG--RATEKT 562
DVK NI++ + +L DFG AR + S T Y +PE LL G +
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPE-LLVGDTQYGPPV 184
Query: 563 DVFSYGAVVLEVASG 577
DV++ G V E+ SG
Sbjct: 185 DVWAIGCVFAELLSG 199
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 44 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 96
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 153
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 154 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 208
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 388 IGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRL--- 441
IG GA G V Y +L +N I + R N EL ++ + H+N++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 442 ---QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
Q E ++ LV +LM + +L + + + L S +L + + +LH
Sbjct: 130 FTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQMLCGIKHLHSA-- 183
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+IHRD+K SNI++ ++ DFGLAR S T T Y APE +L
Sbjct: 184 -GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 559 TEKTDVFSYGAVVLEVASGR 578
E D++S G ++ E+ +
Sbjct: 241 KENVDIWSVGCIMGEMVRHK 260
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
pdb|1RIN|C Chain C, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
Length = 180
Score = 59.3 bits (142), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L GD + + LT+ V + G+ALYS P+ T A I
Sbjct: 17 NLIFQGDGYTTKEKLTLTKAVK---NTVGRALYSSPIHIWDRETGNVANFVTSFTFVINA 73
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLD--EKGAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + E VAVEFDT + + N
Sbjct: 74 PNSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSAEYDKTTETVAVEFDTFYNAAWDPSNR 133
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSY 212
+ H+G+D+NS+ S ++T + L++G+ N I ++ T +S++Y
Sbjct: 134 DRHIGIDVNSIKS-----VNTKSWKLQNGEEANVVIAFNAATNVLTVSLTY 179
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 50 GDAHMNNGSVRLTRDVTVPYDGA-GKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPS 108
GDA ++ V V+ P + G+ALY+ P++ T A + + S
Sbjct: 24 GDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSF-VVKADKS 82
Query: 109 SIGAGLAFVITPDGEQV--GSAGGSLGLLDEKGAGLG--FVAVEFDTLMDVEFS--DING 162
GLAF + P Q+ GS+ G GL + +AVEFDT ++ D +
Sbjct: 83 DGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSNQIIAVEFDTYFGKAYNPWDPDF 142
Query: 163 NHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPIL 222
H+G+D+NS+ S + T+ D ++G++ + I Y T++ + +SY + I+
Sbjct: 143 KHIGIDVNSIKS-----IKTVKWDWRNGEVADVVITYRAPTKSLTVCLSYPS-DGTSNII 196
Query: 223 SFTLDLDQYVNDFMYVGFSGSTQGSTEIH 251
+ ++DL + +++ VGFSG + E
Sbjct: 197 TASVDLKAILPEWVSVGFSGGVGNAAEFE 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 37 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 89
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 90 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 146
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V K T+ GT YLAPE +L+
Sbjct: 147 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWTLC-GTPEYLAPEIILSKGY 201
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPPF 224
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 130
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 131 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 137
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 138 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 44 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 96
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL-- 153
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 154 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 208
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 209 NKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 20 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 79
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 80 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 135
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 136 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 190
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 129
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 130 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 184
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+M+D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 137
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 138 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLS----ELSIIGTLRHRNLVRLQG 443
+G G FG V G G +AVK + + + E+ + RH ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 444 WCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
+ +V + + G L + + R ++ + SA+ Y H+ + V+H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHR---HMVVH 134
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR--ATEK 561
RD+K N++LD NA++ DFGL+ + + + G+ Y APE +++GR A +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRTSCGSPNYAAPE-VISGRLYAGPE 191
Query: 562 TDVFSYGAVVLEVASGRRPIEKE 584
D++S G ++ + G P + E
Sbjct: 192 VDIWSCGVILYALLCGTLPFDDE 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 38/233 (16%)
Query: 368 KEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSEL 427
KE +++ + F ++++G G+FG V+ + A+K + KD L +
Sbjct: 6 KERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIK-----ALKKDVVLMDD 60
Query: 428 SIIGTLRHRNLVRLQGWCHE-----------KGEILLVYDLMPNGSLDKALFEARSPLPW 476
+ T+ + ++ L W H K + V + + G L ++ +S +
Sbjct: 61 DVECTMVEKRVLSL-AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKF 116
Query: 477 P------HRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ ++I+LG L +LH + +++RD+K NI+LD+ + ++ DFG+ ++
Sbjct: 117 DLSRATFYAAEIILG----LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE- 168
Query: 531 EHDKSPDATVA--AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
+ DA GT Y+APE LL + D +S+G ++ E+ G+ P
Sbjct: 169 --NMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 130
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 131 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y +L +N I + R N EL ++ +
Sbjct: 59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 118
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + + L S +L +
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---QMELDHERMSYLLYQML 174
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 175 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 229
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F + +G G+FG V + G+ A+K K + L+E I+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + +P G + L PH + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V K T+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWTLC-GTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+M+D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F + +G G+FG V + G+ A+K K + L+E I+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + +P G + L PH + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 15/204 (7%)
Query: 378 ATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRN 437
T F ++ H G Y + ++ +K+ H L+E I+ +
Sbjct: 71 GTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPF 123
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + +P G + L PH + YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 181
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 182 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 235
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F + +G G+FG V + G+ A+K K + L+E I+ +
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + +P G + L PH + YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 20/216 (9%)
Query: 45 SLKLLGDAHMNN-GSVRLTR---DVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXX 100
+L L DA +N+ G++ LT VP D G+ALY+ P+ T A
Sbjct: 17 NLILQEDALVNSAGTLELTAVAAGAPVP-DSLGRALYAAPIHIH--DNTTLASFTTSFSF 73
Query: 101 XITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKG--AGLGFVAVEFDTLMDVEFS 158
+ +++ GLAF + P Q + GG LGL ++ A VAVEFDT +
Sbjct: 74 VMAAPAAAAVADGLAFFLAPPDTQPQARGGFLGLFADRAHDASYQTVAVEFDTYSNAW-- 131
Query: 159 DINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPK 218
D N H+G+D N + S + T D+ G+ N I Y T+A S+ + +
Sbjct: 132 DPNYTHIGIDTNGIESKK-----TTPFDMVYGEKANIVITYQASTKALAASLVFPVSQTS 186
Query: 219 VPILSFTLDLDQYVNDFMYVGFSGST---QGSTEIH 251
+ S +DL + +++ VGFS +T G E H
Sbjct: 187 YAV-SARVDLRDILPEYVRVGFSATTGLNAGVVETH 221
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 91/206 (44%), Gaps = 24/206 (11%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQG-----KDEFLSELSIIGTLRHRNLVRL- 441
IG G+F TVYKG+ + + V C + + F E + L+H N+VR
Sbjct: 34 IGRGSFKTVYKGLDTET--TVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 442 QGW---CHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRS---KILLGVASALAYLHQ 495
W K I+LV +L +G+L L + RS +IL G L +LH
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKG----LQFLHT 147
Query: 496 ECENQVIHRDVKTSNIMLD-EGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL 554
+IHRD+K NI + + ++GD GLA ++ A GT + APE
Sbjct: 148 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT---LKRASFAKAVIGTPEFXAPE-XY 202
Query: 555 TGRATEKTDVFSYGAVVLEVASGRRP 580
+ E DV+++G LE A+ P
Sbjct: 203 EEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK-----RCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
+G G F V K G A K R S + +G ++E E++I+ +RH N++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L K +++L+ +L+ G L L E S L ++ L + + YLH + +
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSK---R 135
Query: 501 VIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+ H D+K NIM LD+ +L DFG+A ++E + GT ++APE +
Sbjct: 136 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE--AGNEFKNIFGTPEFVAPEIVNYE 193
Query: 557 RATEKTDVFSYGAVVLEVASGRRP 580
+ D++S G + + SG P
Sbjct: 194 PLGLEADMWSIGVITYILLSGASP 217
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 19/208 (9%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHR 436
K + + +G GA+G+V I ++G+ +A+K+ S Q + EL ++ ++H
Sbjct: 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE 101
Query: 437 NLVRLQGWCHEKGEILLVYD---LMP--NGSLDKALFEARSPLPWPHRSKILLGVASALA 491
N++ L + YD +MP L K + S + ++ + L
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY---LVYQMLKGLK 158
Query: 492 YLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPE 551
Y+H V+HRD+K N+ ++E ++ DFGLAR + + T T Y APE
Sbjct: 159 YIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPE 211
Query: 552 YLLTGRATEKT-DVFSYGAVVLEVASGR 578
+L+ +T D++S G ++ E+ +G+
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK-----RCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
+G G F V K G A K R S + +G ++E E++I+ +RH N++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L K +++L+ +L+ G L L E S L ++ L + + YLH + +
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSK---R 128
Query: 501 VIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+ H D+K NIM LD+ +L DFG+A ++E + GT ++APE +
Sbjct: 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE--AGNEFKNIFGTPEFVAPEIVNYE 186
Query: 557 RATEKTDVFSYGAVVLEVASGRRP 580
+ D++S G + + SG P
Sbjct: 187 PLGLEADMWSIGVITYILLSGASP 210
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F R +G G+FG V + G+ A+K K + L+E I +
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + P G + L PH + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 161
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 --DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 215
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 19/200 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK---DEFLSELSIIGTLRHRNLVRLQGW 444
+G GA+G+V I ++G+ +A+K+ S Q + EL ++ ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 445 CHEKGEILLVYD---LMPNGSLDKALFEARSPLPWPHR--SKILLGVASALAYLHQECEN 499
+ YD +MP D + L + ++ + L Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTD---LQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG-- 146
Query: 500 QVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
V+HRD+K N+ ++E ++ DFGLAR + + T T Y APE +L+
Sbjct: 147 -VVHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPEVILSWMHY 201
Query: 560 EKT-DVFSYGAVVLEVASGR 578
+T D++S G ++ E+ +G+
Sbjct: 202 NQTVDIWSVGCIMAEMLTGK 221
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 148/352 (42%), Gaps = 60/352 (17%)
Query: 368 KEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSEL 427
KE +++ + F ++++G G+FG V+ + A+K + KD L +
Sbjct: 5 KERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIK-----ALKKDVVLMDD 59
Query: 428 SIIGTLRHRNLVRLQGWCHE-----------KGEILLVYDLMPNGSLDKALFEARSPLPW 476
+ T+ + ++ L W H K + V + + G L ++ +S +
Sbjct: 60 DVECTMVEKRVLSL-AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKF 115
Query: 477 P------HRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV 530
+ ++I+LG L +LH + +++RD+K NI+LD+ + ++ DFG+ ++
Sbjct: 116 DLSRATFYAAEIILG----LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE- 167
Query: 531 EHDKSPDATVA--AGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI----EKE 584
+ DA GT Y+APE LL + D +S+G ++ E+ G+ P E+E
Sbjct: 168 --NMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225
Query: 585 ITGVGKVG----------VASNLVEWVWSLHREGRLLTAADARLEGQFDEAEMRRVLLVG 634
+ ++ A +L+ ++ E RL D R F R +
Sbjct: 226 LFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLF-----REINWEE 280
Query: 635 LACSHPDPLARPTMRGVVQMLVGEAEVPIVPRAKPSMTFSTSHLLLSLQDSV 686
L DP RP ++ + E KP ++F+ L+ S+ ++
Sbjct: 281 LERKEIDPPFRPKVKSPFDCSNFDKE---FLNEKPRLSFADRALINSMDQNM 329
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 83/198 (41%), Gaps = 9/198 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG Q+ +++AVK + + E+ +LRH N+VR +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ +V + G L + + A + S ++Y H QV HRD+K
Sbjct: 86 PTHLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHA---MQVCHRDLK 141
Query: 508 TSNIMLDEGFNARLG--DFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT-DV 564
N +LD RL DFG ++ P +TV GT Y+APE LL K DV
Sbjct: 142 LENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADV 199
Query: 565 FSYGAVVLEVASGRRPIE 582
+S G + + G P E
Sbjct: 200 WSCGVTLYVMLVGAYPFE 217
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDII---AVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
+ IG G++G V I Q G I A K + + D F E+ I+ +L H N+
Sbjct: 11 YTLENTIGRGSWGEV--KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 68
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
+RL + +I LV +L G L + + R ++I+ V SA+AY H+
Sbjct: 69 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHK--- 124
Query: 499 NQVIHRDVKTSNIM-LDEGFNA--RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
V HRD+K N + L + ++ +L DFGLA + + K V GT Y++P+ +L
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQ-VLE 181
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPI 581
G + D +S G ++ + G P
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDII---AVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
+ IG G++G V I Q G I A K + + D F E+ I+ +L H N+
Sbjct: 28 YTLENTIGRGSWGEV--KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI 85
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
+RL + +I LV +L G L + + R ++I+ V SA+AY H+
Sbjct: 86 IRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCHK--- 141
Query: 499 NQVIHRDVKTSNIM-LDEGFNA--RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLT 555
V HRD+K N + L + ++ +L DFGLA + + K V GT Y++P+ +L
Sbjct: 142 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQ-VLE 198
Query: 556 GRATEKTDVFSYGAVVLEVASGRRPI 581
G + D +S G ++ + G P
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + +P G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L
pdb|1AVB|B Chain B, Arcelin-1 From Phaseolus Vulgaris L
Length = 226
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 23/229 (10%)
Query: 31 STATEFDFGTLTLASLKLLGDAHMNN-GSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTH 89
S F+ T +L L GDA +++ G + LT D G+A YS P++
Sbjct: 1 SNDASFNVETFNKTNLILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTID 60
Query: 90 TPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLG--FVAV 147
A I N + GLAF + P G + G LGL + VAV
Sbjct: 61 NLASFSTNFTFRINAKNIENSAYGLAFALVPVGSRPKLKGRYLGLFNTTNYDRDAHTVAV 120
Query: 148 EFDTLMDVEFSDINGNHVGLDLNSM--VSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRA 205
FDT+ N + +D+NS+ ++TE + N +G+ I YD
Sbjct: 121 VFDTV---------SNRIEIDVNSIRPIATE-----SCNFGHNNGEKAEVRITYDSPKND 166
Query: 206 FNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGF---SGSTQGSTEIH 251
+S+ Y + + K + S T+ L++ V D++ VGF SGS + +TE H
Sbjct: 167 LRVSLLYPSSEEKCHV-SATVPLEKEVEDWVSVGFSATSGSKKETTETH 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 423 FLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKI 482
F E+ L H+N+V + E LV + + +L + + E+ PL
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINF 116
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAA 542
+ + + H + +++HRD+K NI++D ++ DFG+A+ +
Sbjct: 117 TNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVL 173
Query: 543 GTMGYLAPEYLLTGRATEK-TDVFSYGAVVLEVASGRRPIEKE 584
GT+ Y +PE G AT++ TD++S G V+ E+ G P E
Sbjct: 174 GTVQYFSPEQ-AKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
+L+ + + +V + P G + L PH + YLH
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+M+D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 13/203 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLS----ELSIIGTLRHRNLVRLQG 443
+G G FG V G G +AVK + + + E+ + RH ++++L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 444 WCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIH 503
+ +V + + G L + + R ++ + SA+ Y H+ + V+H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCHR---HMVVH 134
Query: 504 RDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR--ATEK 561
RD+K N++LD NA++ DFGL+ + + + G+ Y APE +++GR A +
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEF--LRDSCGSPNYAAPE-VISGRLYAGPE 191
Query: 562 TDVFSYGAVVLEVASGRRPIEKE 584
D++S G ++ + G P + E
Sbjct: 192 VDIWSCGVILYALLCGTLPFDDE 214
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWC 445
++IG+G+FG V++ L ++ D +A+K+ + + K+ EL I+ ++H N+V L+ +
Sbjct: 46 KVIGNGSFGVVFQAKLVES-DEVAIKKVLQDKRFKNR---ELQIMRIVKHPNVVDLKAFF 101
Query: 446 HEKGE------ILLVYDLMPNGSLDKALFEA--RSPLPWPHRSKILLGVASALAYLHQEC 497
+ G+ + LV + +P + A + +P + + +LAY+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS-- 159
Query: 498 ENQVIHRDVKTSNIMLDEGFNA-RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLL-T 555
+ HRD+K N++LD +L DFG A+ + P+ + Y APE +
Sbjct: 160 -IGICHRDIKPQNLLLDPPSGVLKLIDFGSAK-ILIAGEPNVSXICSRY-YRAPELIFGA 216
Query: 556 GRATEKTDVFSYGAVVLEVASGR 578
T D++S G V+ E+ G+
Sbjct: 217 TNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR + V T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
+L+ + + +V + P G + L PH + YLH
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+M+D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 23 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 82
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 83 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 138
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T Y
Sbjct: 139 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYY 193
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 104
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
+L+ + + +V + P G + L PH + YLH
Sbjct: 105 TKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL-- 161
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+M+D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGY 216
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 130
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 131 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKD---EFLSELSIIGTLRH-RNLVRLQG 443
+G G F V + I G A K +G+D E L E++++ + ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 444 WCHEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
EI+L+ + G + L E + +++ + + YLHQ N ++
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIV 153
Query: 503 HRDVKTSNIMLDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRAT 559
H D+K NI+L + + ++ DFG++R++ H + + GT YLAPE L T
Sbjct: 154 HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH--ACELREIMGTPEYLAPEILNYDPIT 211
Query: 560 EKTDVFSYGAVVLEVASGRRP 580
TD+++ G + + + P
Sbjct: 212 TATDMWNIGIIAYMLLTHTSP 232
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 20/237 (8%)
Query: 367 PKEFSYRE-LRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLS 425
P ++ YRE + AT +G G+FG V++ Q G AVK+ +E ++
Sbjct: 83 PVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA 138
Query: 426 ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG 485
L +V L G E + + +L+ GSL + L + + LP R+ LG
Sbjct: 139 ----CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLP-EDRALYYLG 192
Query: 486 VA-SALAYLHQECENQVIHRDVKTSNIMLD-EGFNARLGDFGLARQVEHDKSPDATVAA- 542
A L YLH +++H DVK N++L +G +A L DFG A ++ D + +
Sbjct: 193 QALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGD 249
Query: 543 ---GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASN 596
GT ++APE +L K DV+S ++L + +G P + G + +AS
Sbjct: 250 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASE 306
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 147
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++DE ++ DFG A++V+ GT YLAPE +L+
Sbjct: 148 --DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 201
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase
Length = 223
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 31 STATEFDFGTLTLASLKLLGDAHMN-NGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTH 89
+T T F +L L GDA ++ NG+++L+ + YD +A YS P++ R T
Sbjct: 1 ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYN---SYDSMSRAFYSAPIQIRDSTTG 57
Query: 90 TPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEF 149
A I ++ GL FV+ P Q S G + V VEF
Sbjct: 58 NVASFDTNFTMNIRTHRQANSAVGLDFVLVP--VQPESKGDT-------------VTVEF 102
Query: 150 DTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNIS 209
DT + D+N N + V +V + D N +++ I Y+ T+ F++S
Sbjct: 103 DTFLSRISIDVNNNDI-----KSVPWDVHDYDGQNAEVR--------ITYNSSTKVFSVS 149
Query: 210 VSYSNLKPKVPILSFTLDLDQYVNDFMYVGF---SGSTQGSTEIH 251
+S + K +S T++L++ V D++ VGF SG+ Q S E H
Sbjct: 150 LSNPSTG-KSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETH 193
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 93/228 (40%), Gaps = 42/228 (18%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKD-----EFLSELSIIGTLRHR 436
+ +IG G++G VY +A+K+ N +D L E++I+ L+
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSD 87
Query: 437 NLVRLQGWCHEKGEILLVYD-----LMPNGSLDKALFEARSPLPWPHRSKILLGVASALA 491
++RL E LL +D L S K LF+ L H IL +
Sbjct: 88 YIIRLHDLI--IPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEK 145
Query: 492 YLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDK----------------- 534
++H E+ +IHRD+K +N +L++ + ++ DFGLAR + DK
Sbjct: 146 FIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 535 -------SPDATVAAGTMGYLAPEY-LLTGRATEKTDVFSYGAVVLEV 574
T T Y APE LL T D++S G + E+
Sbjct: 203 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ AGT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 26 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 85
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 141
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR S T T Y
Sbjct: 142 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 196
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF-LS 425
P ++ YRE +G G+FG V++ Q G AVK+ + F +
Sbjct: 64 PVDYEYRE---EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR-----LEVFRVE 115
Query: 426 ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG 485
EL L +V L G E + + +L+ GSL + L + LP R+ LG
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLP-EDRALYYLG 173
Query: 486 VA-SALAYLHQECENQVIHRDVKTSNIMLD-EGFNARLGDFGLARQVEHDKSPDATVAA- 542
A L YLH +++H DVK N++L +G A L DFG A ++ D + +
Sbjct: 174 QALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 543 ---GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVAS 595
GT ++APE ++ K D++S ++L + +G P + G + +AS
Sbjct: 231 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS 286
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF-LS 425
P ++ YRE +G G+FG V++ Q G AVK+ + F +
Sbjct: 48 PVDYEYRE---EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR-----LEVFRVE 99
Query: 426 ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG 485
EL L +V L G E + + +L+ GSL + L + LP R+ LG
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLP-EDRALYYLG 157
Query: 486 VA-SALAYLHQECENQVIHRDVKTSNIMLD-EGFNARLGDFGLARQVEHDKSPDATVAA- 542
A L YLH +++H DVK N++L +G A L DFG A ++ D + +
Sbjct: 158 QALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 543 ---GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVAS 595
GT ++APE ++ K D++S ++L + +G P + G + +AS
Sbjct: 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS 270
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V G +AVK+ S N EL ++ +
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 78
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + L S +L +
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---HMELDHERMSYLLYQML 134
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR + T T Y
Sbjct: 135 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM--MTPYVVTRYY 189
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L E D++S G ++ E+ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 118/243 (48%), Gaps = 36/243 (14%)
Query: 372 YRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELS 428
++ + + ++ + IG G V++ +L + I A+K + ++Q D + +E++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 429 IIGTLRHRN--LVRLQGWCHEKGEIL--LVYDLMPNGSLD--KALFEARSPLPWPHRSKI 482
+ L+ + ++RL + EI +Y +M G++D L + +S PW R
Sbjct: 79 YLNKLQQHSDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSY 132
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS---PDAT 539
+ A+ +HQ + ++H D+K +N ++ +G +L DFG+A Q++ D + D+
Sbjct: 133 WKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 540 VAAGTMGYLAPEYLLTGRATEKT-----------DVFSYGAVVLEVASGRRPIEKEITGV 588
V GT+ Y+ PE + ++ + DV+S G ++ + G+ P ++ I +
Sbjct: 189 V--GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 589 GKV 591
K+
Sbjct: 247 SKL 249
>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex
Length = 205
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 36/225 (16%)
Query: 31 STATEFDFGTLTLASLKLLGDAHMN-NGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTH 89
+T T F +L L GDA ++ NG+++L+ + YD +A YS P++ R T
Sbjct: 1 ATETSFIIDAFNKTNLILQGDATVSSNGNLQLSYN---SYDSMSRAFYSAPIQIRDSTTG 57
Query: 90 TPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEF 149
A I ++ GL FV+ P Q S G + V VEF
Sbjct: 58 NVASFDTNFTMNIRTHRQANSAVGLDFVLVP--VQPESKGDT-------------VTVEF 102
Query: 150 DTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNIS 209
DT + D+N N + V +V + D N +++ I Y+ T+ F++S
Sbjct: 103 DTFLSRISIDVNNNDI-----KSVPWDVHDYDGQNAEVR--------ITYNSSTKVFSVS 149
Query: 210 VSYSNLKPKVPILSFTLDLDQYVNDFMYVGF---SGSTQGSTEIH 251
+S + K +S T++L++ V D++ VGF SG+ Q S E H
Sbjct: 150 LSNPSTG-KSNNVSTTVELEKEVYDWVSVGFSATSGAYQWSYETH 193
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 377 SATKCFNANRIIGHGAFGTV---YKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V Y IL +N I + R N EL ++ +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ +V +LM + +L + + + L S +L +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI---QMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR + V T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV--TRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASGR 578
APE +L E D++S G ++ E+ +
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 43/245 (17%)
Query: 377 SATKCFNAN-------RIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSE 426
SA +C + + IG G V++ +L + I A+K + ++Q D + +E
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 427 LSIIGTLRHRN--LVRLQGWCHEKGEIL--LVYDLMPNGSLD--KALFEARSPLPWPHRS 480
++ + L+ + ++RL + EI +Y +M G++D L + +S PW R
Sbjct: 105 IAYLNKLQQHSDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERK 158
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS---PD 537
+ A+ +HQ + ++H D+K +N ++ +G +L DFG+A Q++ D + D
Sbjct: 159 SYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 214
Query: 538 ATVAAGTMGYLAPEYLLTGRATEKT-----------DVFSYGAVVLEVASGRRPIEKEIT 586
+ V GT+ Y+ PE + ++ + DV+S G ++ + G+ P ++ I
Sbjct: 215 SQV--GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 587 GVGKV 591
+ K+
Sbjct: 273 QISKL 277
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 16/205 (7%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRN-L 438
K F +I GH G +Y + + I+ + + +++ +E ++ +R L
Sbjct: 69 KVFLVRKISGHDT-GKLYAMKVLKKATIVQKAKTTEHTR------TERQVLEHIRQSPFL 121
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG-VASALAYLHQEC 497
V L + ++ L+ D + G L L ++ H +I +G + AL +LH+
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K NI+LD + L DFGL+++ D++ A GT+ Y+AP+ + G
Sbjct: 180 ---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 558 A--TEKTDVFSYGAVVLEVASGRRP 580
+ + D +S G ++ E+ +G P
Sbjct: 237 SGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 367 PKEFSYRE-LRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLS 425
P ++ YRE + AT +G G+FG V++ Q G AVK+ +E ++
Sbjct: 64 PVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA 119
Query: 426 ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG 485
L +V L G E + + +L+ GSL + L + + LP R+ LG
Sbjct: 120 ----CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLP-EDRALYYLG 173
Query: 486 VA-SALAYLHQECENQVIHRDVKTSNIMLD-EGFNARLGDFGLARQVEHDKSPDATVAA- 542
A L YLH +++H DVK N++L +G +A L DFG A ++ D +
Sbjct: 174 QALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGD 230
Query: 543 ---GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASN 596
GT ++APE +L K DV+S ++L + +G P + G + +AS
Sbjct: 231 YIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASE 287
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 20/236 (8%)
Query: 367 PKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEF-LS 425
P ++ YRE +G G+FG V++ Q G AVK+ + F +
Sbjct: 62 PVDYEYRE---EVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVR-----LEVFRVE 113
Query: 426 ELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLG 485
EL L +V L G E + + +L+ GSL + L + LP R+ LG
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LIKQMGCLP-EDRALYYLG 171
Query: 486 VA-SALAYLHQECENQVIHRDVKTSNIMLD-EGFNARLGDFGLARQVEHDKSPDATVAA- 542
A L YLH +++H DVK N++L +G A L DFG A ++ D + +
Sbjct: 172 QALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 543 ---GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVAS 595
GT ++APE ++ K D++S ++L + +G P + G + +AS
Sbjct: 229 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS 284
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVK------RCSHNSQGKDEFLSELSIIGTLRH 435
+ +IG G F V + I + G AVK S ++ E SI L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE--ARSPLPWPHR----SKILLGVASA 489
++V L G + +V++ M L FE R+ + + S + + A
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMG 546
L Y H +N +IHRDVK ++L N+ +LG FG+A Q+ VA G +G
Sbjct: 143 LRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL----GESGLVAGGRVG 195
Query: 547 ---YLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI----EKEITGVGKVGVASNLVE 599
++APE + + DV+ G ++ + SG P E+ G+ K N +
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQ 255
Query: 600 W 600
W
Sbjct: 256 W 256
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVK-----RCSHNSQG--KDEFLSELSIIGTLRHRNLVR 440
+G G F V K G A K R + +G ++E E++I+ +RH N++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 441 LQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQ 500
L K +++L+ +L+ G L L E S L ++ L + + YLH + +
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKES-LTEDEATQFLKQILDGVHYLHSK---R 149
Query: 501 VIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTG 556
+ H D+K NIM LD+ +L DFG+A ++E + GT ++APE +
Sbjct: 150 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE--AGNEFKNIFGTPEFVAPEIVNYE 207
Query: 557 RATEKTDVFSYGAVVLEVASGRRP 580
+ D++S G + + SG P
Sbjct: 208 PLGLEADMWSIGVITYILLSGASP 231
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS----QGKDEFLSELSIIGTLRHRN 437
+ + +G GA+G V G A+K +S L E++++ L H N
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+++L + +K LV ++ G L D+ + R + I+ V S YLH+
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL--RQKFSEVDAAVIMKQVLSGTTYLHK- 139
Query: 497 CENQVIHRDVKTSNIMLDEGFN---ARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
+ ++HRD+K N++L+ ++ DFGL+ E + GT Y+APE +
Sbjct: 140 --HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPE-V 194
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRP 580
L + EK DV+S G ++ + G P
Sbjct: 195 LRKKYDEKCDVWSCGVILYILLCGYPP 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPAFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 93/204 (45%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 181
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V K T+ GT YLAPE +L+
Sbjct: 182 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGATWTLC-GTPEYLAPEIILSKG 235
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 117/245 (47%), Gaps = 43/245 (17%)
Query: 377 SATKCFNAN-------RIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSE 426
SA +C + + IG G V++ +L + I A+K + ++Q D + +E
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 427 LSIIGTLRHRN--LVRLQGWCHEKGEIL--LVYDLMPNGSLD--KALFEARSPLPWPHRS 480
++ + L+ + ++RL + EI +Y +M G++D L + +S PW R
Sbjct: 105 IAYLNKLQQHSDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERK 158
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS---PD 537
+ A+ +HQ + ++H D+K +N ++ +G +L DFG+A Q++ D + D
Sbjct: 159 SYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 214
Query: 538 ATVAAGTMGYLAPEYLLTGRATEKT-----------DVFSYGAVVLEVASGRRPIEKEIT 586
+ V GT+ Y+ PE + ++ + DV+S G ++ + G+ P ++ I
Sbjct: 215 SQV--GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 587 GVGKV 591
+ K+
Sbjct: 273 QISKL 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 115/235 (48%), Gaps = 36/235 (15%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHR 436
+ ++ + IG G V++ +L + I A+K + ++Q D + +E++ + L+
Sbjct: 12 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 70
Query: 437 N--LVRLQGWCHEKGEIL--LVYDLMPNGSLD--KALFEARSPLPWPHRSKILLGVASAL 490
+ ++RL + EI +Y +M G++D L + +S PW R + A+
Sbjct: 71 SDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAV 124
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS---PDATVAAGTMGY 547
+HQ + ++H D+K +N ++ +G +L DFG+A Q++ D + D+ V GT+ Y
Sbjct: 125 HTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV--GTVNY 178
Query: 548 LAPEYLLTGRATEKT-----------DVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ PE + ++ + DV+S G ++ + G+ P ++ I + K+
Sbjct: 179 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 233
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 32/241 (13%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRC------SHNSQGKDEFLSELSIIGTLRH 435
+ +IG G F V + I + G AVK S ++ E SI L+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFE--ARSPLPWPHR----SKILLGVASA 489
++V L G + +V++ M L FE R+ + + S + + A
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 490 LAYLHQECENQVIHRDVKTSNIMLDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMG 546
L Y H +N +IHRDVK ++L N+ +LG FG+A Q+ VA G +G
Sbjct: 145 LRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL----GESGLVAGGRVG 197
Query: 547 ---YLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPI----EKEITGVGKVGVASNLVE 599
++APE + + DV+ G ++ + SG P E+ G+ K N +
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQ 257
Query: 600 W 600
W
Sbjct: 258 W 258
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS----QGKDEFLSELSIIGTLRHRN 437
+ + +G GA+G V G A+K +S L E++++ L H N
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSL-DKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
+++L + +K LV ++ G L D+ + R + I+ V S YLH+
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL--RQKFSEVDAAVIMKQVLSGTTYLHK- 122
Query: 497 CENQVIHRDVKTSNIMLDEGFN---ARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYL 553
+ ++HRD+K N++L+ ++ DFGL+ E + GT Y+APE +
Sbjct: 123 --HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPE-V 177
Query: 554 LTGRATEKTDVFSYGAVVLEVASGRRPI 581
L + EK DV+S G ++ + G P
Sbjct: 178 LRKKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 82/198 (41%), Gaps = 9/198 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG Q+ +++AVK + E+ +LRH N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ +V + G L + + A + S ++Y H QV HRD+K
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCHA---MQVCHRDLK 142
Query: 508 TSNIMLDEGFNARLG--DFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT-DV 564
N +LD RL DFG ++ P +TV GT Y+APE LL K DV
Sbjct: 143 LENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADV 200
Query: 565 FSYGAVVLEVASGRRPIE 582
+S G + + G P E
Sbjct: 201 WSCGVTLYVMLVGAYPFE 218
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 113/229 (49%), Gaps = 36/229 (15%)
Query: 386 RIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHRN--LVR 440
+ IG G V++ +L + I A+K + ++Q D + +E++ + L+ + ++R
Sbjct: 15 KQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 73
Query: 441 LQGWCHEKGEIL--LVYDLMPNGSLD--KALFEARSPLPWPHRSKILLGVASALAYLHQE 496
L + EI +Y +M G++D L + +S PW +S + A+ +HQ
Sbjct: 74 LYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKS-YWKNMLEAVHTIHQ- 126
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS---PDATVAAGTMGYLAPEYL 553
+ ++H D+K +N ++ +G +L DFG+A Q++ D + D+ V GT+ Y+ PE +
Sbjct: 127 --HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV--GTVNYMPPEAI 181
Query: 554 LTGRATEKT-----------DVFSYGAVVLEVASGRRPIEKEITGVGKV 591
++ + DV+S G ++ + G+ P ++ I + K+
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 230
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNS-QGKDEFLSELSIIGTLR-HRNLVRLQ 442
+ ++G GA+ V + QNG AVK + + E+ + + ++N++ L
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 443 GWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVI 502
+ + LV++ + GS+ A + + S+++ VA+AL +LH + +
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSI-LAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIA 133
Query: 503 HRDVKTSNIMLDEGFN---ARLGDFGLARQVEHDKS------PDATVAAGTMGYLAPEY- 552
HRD+K NI+ + ++ DF L ++ + S P+ T G+ Y+APE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 553 -LLTGRAT---EKTDVFSYGAVVLEVASGRRPI 581
+ T +AT ++ D++S G V+ + SG P
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 115/235 (48%), Gaps = 36/235 (15%)
Query: 380 KCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTLRHR 436
+ ++ + IG G V++ +L + I A+K + ++Q D + +E++ + L+
Sbjct: 8 RIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 66
Query: 437 N--LVRLQGWCHEKGEIL--LVYDLMPNGSLD--KALFEARSPLPWPHRSKILLGVASAL 490
+ ++RL + EI +Y +M G++D L + +S PW R + A+
Sbjct: 67 SDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAV 120
Query: 491 AYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS---PDATVAAGTMGY 547
+HQ + ++H D+K +N ++ +G +L DFG+A Q++ D + D+ V GT+ Y
Sbjct: 121 HTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQV--GTVNY 174
Query: 548 LAPEYLLTGRATEKT-----------DVFSYGAVVLEVASGRRPIEKEITGVGKV 591
+ PE + ++ + DV+S G ++ + G+ P ++ I + K+
Sbjct: 175 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 229
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 117/243 (48%), Gaps = 36/243 (14%)
Query: 372 YRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELS 428
++ + + ++ + IG G V++ +L + I A+K + ++Q D + +E++
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 429 IIGTLRHRN--LVRLQGWCHEKGEIL--LVYDLMPNGSLD--KALFEARSPLPWPHRSKI 482
+ L+ + ++RL + EI +Y +M G++D L + +S PW R
Sbjct: 79 YLNKLQQHSDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERKSY 132
Query: 483 LLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS---PDAT 539
+ A+ +HQ + ++H D+K +N ++ +G +L DFG+A Q++ D D+
Sbjct: 133 WKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQ 188
Query: 540 VAAGTMGYLAPEYLLTGRATEKT-----------DVFSYGAVVLEVASGRRPIEKEITGV 588
V GT+ Y+ PE + ++ + DV+S G ++ + G+ P ++ I +
Sbjct: 189 V--GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 589 GKV 591
K+
Sbjct: 247 SKL 249
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|F Chain F, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|G Chain G, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|H Chain H, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
Length = 133
Score = 56.2 bits (134), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 7/105 (6%)
Query: 145 VAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTR 204
VAVEFDT ++ ++ D N H+G+D+NS+ S T D ++G + + I Y+ +++
Sbjct: 4 VAVEFDTYLNPDYGDPNYIHIGIDVNSIRSKV-----TAKWDWQNGKIATAHISYNSVSK 58
Query: 205 AFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQGSTE 249
+++ Y+ KP LS+ ++L + +++ VG S ST E
Sbjct: 59 RLSVTSYYAGSKPAT--LSYDIELHTVLPEWVRVGLSASTGQDKE 101
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 130
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 131 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 185
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 130
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 131 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 185
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 161
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 162 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 215
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFAEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL- 155
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 156 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 209
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL- 181
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 182 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 235
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 21/211 (9%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T + IG G++ + I AVK + + E + L G +H N+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYG--QHPNI 78
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSL-DKAL----FEARSPLPWPHRSKILLGVASALAYL 493
+ L+ + + +V +LM G L DK L F R S +L + + YL
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREA------SAVLFTITKTVEYL 132
Query: 494 HQECENQVIHRDVKTSNIM-LDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMGYLA 549
H + V+HRD+K SNI+ +DE N R+ DFG A+Q+ + T T ++A
Sbjct: 133 HAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT-PCYTANFVA 188
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
PE L D++S G ++ + +G P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 17/210 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRL 441
+ IG G++ + + AVK + + E + L G +H N++ L
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYG--QHPNIITL 86
Query: 442 QGWCHEKGEILLVYDLMPNGSL-DKAL----FEARSPLPWPHRSKILLGVASALAYLHQE 496
+ + + LV +LM G L DK L F R S +L + + YLH +
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA------SFVLHTIGKTVEYLHSQ 140
Query: 497 CENQVIHRDVKTSNIM-LDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEY 552
V+HRD+K SNI+ +DE N R+ DFG A+Q+ + T T ++APE
Sbjct: 141 ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT-PCYTANFVAPEV 196
Query: 553 LLTGRATEKTDVFSYGAVVLEVASGRRPI 581
L E D++S G ++ + +G P
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 23/238 (9%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCS-HNSQGKDEFLSELSIIGTLRHRNLVRLQGWCH 446
+G G G V+ + +A+K+ + Q L E+ II L H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 447 EKG-----------EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQ 495
G E+ VY + D A + PL H + + L Y+H
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 496 ECENQVIHRDVKTSNIMLD-EGFNARLGDFGLARQVEHDKSPDATVAAG--TMGYLAPEY 552
V+HRD+K +N+ ++ E ++GDFGLAR ++ S ++ G T Y +P
Sbjct: 139 A---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRL 195
Query: 553 LLT-GRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGR 609
LL+ T+ D+++ G + E+ +G+ G ++ ++E + +H E R
Sbjct: 196 LLSPNNYTKAIDMWAAGCIFAEMLTGK----TLFAGAHELEQMQLILESIPVVHEEDR 249
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 21/208 (10%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRL 441
+ IG G++ + + AVK + + E + L G +H N++ L
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYG--QHPNIITL 86
Query: 442 QGWCHEKGEILLVYDLMPNGSL-DKAL----FEARSPLPWPHRSKILLGVASALAYLHQE 496
+ + + LV +LM G L DK L F R S +L + + YLH +
Sbjct: 87 KDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA------SFVLHTIGKTVEYLHSQ 140
Query: 497 CENQVIHRDVKTSNIM-LDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMGYLAPEY 552
V+HRD+K SNI+ +DE N R+ DFG A+Q+ + T T ++APE
Sbjct: 141 ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMT-PCYTANFVAPEV 196
Query: 553 LLTGRATEKTDVFSYGAVVLEVASGRRP 580
L E D++S G ++ + +G P
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNG-----DIIAVKRCSHNSQG--KDEFLSELSIIGTLR 434
++ +G G F V K G I +R + +G +++ E+SI+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 435 HRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLH 494
H N++ L K +++L+ +L+ G L L E S L ++ L + + + YLH
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-LTEEEATEFLKQILNGVYYLH 131
Query: 495 QECENQVIHRDVKTSNIM-LDEGF---NARLGDFGLARQVEHDKSPDATVAAGTMGYLAP 550
Q+ H D+K NIM LD ++ DFGLA ++ D + GT ++AP
Sbjct: 132 S---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEFVAP 186
Query: 551 EYLLTGRATEKTDVFSYGAVVLEVASGRRPI 581
E + + D++S G + + SG P
Sbjct: 187 EIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex
pdb|2B7Y|C Chain C, Fava Bean Lectin-Glucose Complex
Length = 182
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 45 SLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITN 104
+L G + + LT+ V + G+ALYS P+ T A I
Sbjct: 18 NLIFQGGGYTTKEKLTLTKAVK---NTVGRALYSLPIHIWDSETGNVADFTTTFIFVIDA 74
Query: 105 LNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDING 162
N ++ G F I P + + GG LG+ + K VAVEFDT + + NG
Sbjct: 75 PNGYNVADGFTFFIAPVDTKPQTGGGYLGVFNGKDYDKTAQTVAVEFDTFYNAAWDPSNG 134
Query: 163 N-HVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSN 214
H+G+D+N++ S + T + +L++G+ + I ++ T ++++ Y N
Sbjct: 135 KRHIGIDVNTIKS-----ISTKSWNLQNGEEAHVAISFNATTNVLSVTLLYPN 182
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 9/198 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG Q+ +++AVK + + E+ +LRH N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ +V + G L + + A + S ++Y H QV HRD+K
Sbjct: 87 PTHLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHA---MQVCHRDLK 142
Query: 508 TSNIMLDEGFNARLG--DFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT-DV 564
N +LD RL FG ++ P +TV GT Y+APE LL K DV
Sbjct: 143 LENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLKKEYDGKVADV 200
Query: 565 FSYGAVVLEVASGRRPIE 582
+S G + + G P E
Sbjct: 201 WSCGVTLYVMLVGAYPFE 218
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 388 IGHGAFGTV--YKGILPQNGDIIAVKRC-SHNSQGKDEFLSELSIIGTLRHRNLVRLQGW 444
+G G F V +G+ +G A+KR H Q ++E E + H N++RL +
Sbjct: 37 LGEGGFSYVDLVEGL--HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 445 C-HEKG---EILLVYDLMPNGSL--------DKALFEARSPLPWPHRSKILLGVASALAY 492
C E+G E L+ G+L DK F + W +LLG+ L
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEA 149
Query: 493 LHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQ----VEHDKSP----DATVAAGT 544
+H + HRD+K +NI+L + L D G Q VE + D T
Sbjct: 150 IHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 545 MGYLAPEYLLTGRAT---EKTDVFSYGAVVLEVASGRRPIE 582
+ Y APE E+TDV+S G V+ + G P +
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 421 DEFLSELSIIGTLRHRNLVRLQGWCHEKGE--ILLVYDLMPNGSLDKALFEARSPLPWPH 478
++ E++I+ L H N+V+L + E + +V++L+ G + + PL
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSEDQ 138
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDA 538
+ + YLH + ++IHRD+K SN+++ E + ++ DFG++ + K DA
Sbjct: 139 ARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF---KGSDA 192
Query: 539 TVA--AGTMGYLAPEYLLTGR---ATEKTDVFSYGAVVLEVASGRRPIEKE 584
++ GT ++APE L R + + DV++ G + G+ P E
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 15/203 (7%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T F ++ H G Y + ++ +K+ H L+E I+ + L
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-------LNEKRILQAVNFPFL 103
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECE 498
V+L+ + + +V + + G + L PH + YLH
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 499 NQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRA 558
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----GRTWXLCGTPEYLAPEIILSKGY 215
Query: 559 TEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
VA + +L + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 256
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 305
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 306 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 116/245 (47%), Gaps = 43/245 (17%)
Query: 377 SATKCFNAN-------RIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSE 426
SA +C + + IG G V++ +L + I A+K + ++Q D + +E
Sbjct: 46 SANECISVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNE 104
Query: 427 LSIIGTLRHRN--LVRLQGWCHEKGEIL--LVYDLMPNGSLD--KALFEARSPLPWPHRS 480
++ + L+ + ++RL + EI +Y +M G++D L + +S PW R
Sbjct: 105 IAYLNKLQQHSDKIIRLYDY-----EITDQYIYMVMECGNIDLNSWLKKKKSIDPW-ERK 158
Query: 481 KILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKS---PD 537
+ A+ +HQ + ++H D+K +N ++ +G +L DFG+A Q++ D + D
Sbjct: 159 SYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKD 214
Query: 538 ATVAAGTMGYLAPEYLLTGRATEKT-----------DVFSYGAVVLEVASGRRPIEKEIT 586
+ V G + Y+ PE + ++ + DV+S G ++ + G+ P ++ I
Sbjct: 215 SQV--GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 587 GVGKV 591
+ K+
Sbjct: 273 QISKL 277
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +++
Sbjct: 161 --DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIISKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 55/245 (22%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNS------QGKDEFLSELSIIGTLRHRNLVRL 441
IG G++G V I Q I A+K + N + + +E+ ++ L H N+ RL
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 442 QGWCHEKGEILLVYDLMPNGS-LDK----------------------------------A 466
++ I LV +L G LDK +
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 467 LFEARSPLPWPHRSK----ILLGVASALAYLHQECENQVIHRDVKTSNIML--DEGFNAR 520
+ R L + R K I+ + SAL YLH + + HRD+K N + ++ F +
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIK 210
Query: 521 LGDFGLARQ---VEHDKSPDATVAAGTMGYLAPEYLLTGRAT--EKTDVFSYGAVVLEVA 575
L DFGL+++ + + + T AGT ++APE L T + K D +S G ++ +
Sbjct: 211 LVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLL 270
Query: 576 SGRRP 580
G P
Sbjct: 271 MGAVP 275
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
VA + +L + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 261
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 262 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 310
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 311 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 355
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAPE +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ ++A+G P
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
VA + +L + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 254
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 255 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 303
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 304 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATV---AA 542
VA + +L + IHRD+ NI+L E ++ DFGLAR + D PD A
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDAR 263
Query: 543 GTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVAS-GRRPIEKEITGVGKVGVASNLVEWV 601
+ ++APE + T ++DV+S+G ++ E+ S G P GV + E
Sbjct: 264 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP----YPGV-------KIDEEF 312
Query: 602 WSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQML 655
+EG + A D + EM + + L C H +P RPT +V+ L
Sbjct: 313 CRRLKEGTRMRAPD------YTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 357
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 38/244 (15%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFL---SELSIIGTLRH 435
++ +G GA G V + +A+K S +++ D L +E+ I+ L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSL------DKALFEARSPLPWPHRSKILLGVASA 489
+++++ + + + +V +LM G L +K L EA L + ++LL A
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLL----A 126
Query: 490 LAYLHQECENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
+ YLH EN +IHRD+K N++L +E ++ DFG ++ + ++ GT
Sbjct: 127 VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 547 YLAPEYLL---TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVG-KVGVAS---NLVE 599
YLAPE L+ T D +S G ++ SG P + T V K + S N +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 600 WVWS 603
VW+
Sbjct: 242 EVWA 245
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 38/244 (15%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFL---SELSIIGTLRH 435
++ +G GA G V + +A+K S +++ D L +E+ I+ L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSL------DKALFEARSPLPWPHRSKILLGVASA 489
+++++ + + + +V +LM G L +K L EA L + ++LL A
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLL----A 126
Query: 490 LAYLHQECENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
+ YLH EN +IHRD+K N++L +E ++ DFG ++ + ++ GT
Sbjct: 127 VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 547 YLAPEYLL---TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVG-KVGVAS---NLVE 599
YLAPE L+ T D +S G ++ SG P + T V K + S N +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 600 WVWS 603
VW+
Sbjct: 242 EVWA 245
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 9/198 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG Q +++AVK + + E+ +LRH N+VR +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ +V + G L + + A + S ++Y H QV HRD+K
Sbjct: 87 PTHLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYAHA---MQVAHRDLK 142
Query: 508 TSNIMLDEGFNARL--GDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT-DV 564
N +LD RL DFG ++ P + V GT Y+APE LL K DV
Sbjct: 143 LENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV--GTPAYIAPEVLLKKEYDGKVADV 200
Query: 565 FSYGAVVLEVASGRRPIE 582
+S G + + G P E
Sbjct: 201 WSCGVTLYVMLVGAYPFE 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 38/244 (15%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFL---SELSIIGTLRH 435
++ +G GA G V + +A+K S +++ D L +E+ I+ L H
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSL------DKALFEARSPLPWPHRSKILLGVASA 489
+++++ + + + +V +LM G L +K L EA L + ++LL A
Sbjct: 74 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLL----A 125
Query: 490 LAYLHQECENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
+ YLH EN +IHRD+K N++L +E ++ DFG ++ + ++ GT
Sbjct: 126 VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 180
Query: 547 YLAPEYLL---TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVG-KVGVAS---NLVE 599
YLAPE L+ T D +S G ++ SG P + T V K + S N +
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 240
Query: 600 WVWS 603
VW+
Sbjct: 241 EVWA 244
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 27 VITIS-TATEFDFGT--LTLASLKLLGDAHMNNGSVRLTR---DVTVPYDGAGKALYSKP 80
V TIS + +EF+ G LTL L+ +G ++LT+ + +D G+ LY+KP
Sbjct: 1 VETISFSFSEFEPGNDNLTLQGAALI----TQSGVLQLTKINQNGMPAWDSTGRTLYTKP 56
Query: 81 VRFRLPGTHTPAXXXXXXXXXITNLNPSSIGA-GLAFVITPDGEQVGSAGGSLGLLDEKG 139
V T T A I + A GL F + P + G LG+ +
Sbjct: 57 VHMWDSTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGYGYLGVFNNSK 116
Query: 140 AGLGF--VAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWI 197
+ +AVEFDT + + H+G+D+NS+ S + T L +G + N I
Sbjct: 117 QDNSYQTLAVEFDTFSN-PWDPPQVPHIGIDVNSIRS-----IKTQPFQLDNGQVANVVI 170
Query: 198 EYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST 244
+YD ++ ++ + Y + + ++ +D+ Q + D++ VG SG+T
Sbjct: 171 KYDAPSKILHVVLVYPSSG-AIYTIAEIVDVKQVLPDWVDVGLSGAT 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 38/244 (15%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFL---SELSIIGTLRH 435
++ +G GA G V + +A+K S +++ D L +E+ I+ L H
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSL------DKALFEARSPLPWPHRSKILLGVASA 489
+++++ + + + +V +LM G L +K L EA L + ++LL A
Sbjct: 81 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLL----A 132
Query: 490 LAYLHQECENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
+ YLH EN +IHRD+K N++L +E ++ DFG ++ + ++ GT
Sbjct: 133 VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 187
Query: 547 YLAPEYLL---TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVG-KVGVAS---NLVE 599
YLAPE L+ T D +S G ++ SG P + T V K + S N +
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 247
Query: 600 WVWS 603
VW+
Sbjct: 248 EVWA 251
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 38/244 (15%)
Query: 385 NRIIGHGAFGTVYKGILPQNGDIIAVKRCSH------NSQGKDEFL---SELSIIGTLRH 435
++ +G GA G V + +A+K S +++ D L +E+ I+ L H
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 436 RNLVRLQGWCHEKGEILLVYDLMPNGSL------DKALFEARSPLPWPHRSKILLGVASA 489
+++++ + + + +V +LM G L +K L EA L + ++LL A
Sbjct: 75 PCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---YFYQMLL----A 126
Query: 490 LAYLHQECENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKSPDATVAAGTMG 546
+ YLH EN +IHRD+K N++L +E ++ DFG ++ + ++ GT
Sbjct: 127 VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 547 YLAPEYLL---TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVG-KVGVAS---NLVE 599
YLAPE L+ T D +S G ++ SG P + T V K + S N +
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 600 WVWS 603
VW+
Sbjct: 242 EVWA 245
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 39/220 (17%)
Query: 387 IIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKD-----EFLSELSIIGTLRHRNLVRL 441
+IG G++G VY +A+K+ N +D L E++I+ L+ ++RL
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 442 QGWCHEKG-----EILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQE 496
E+ +V ++ S K LF+ L H IL + ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLEIA--DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH-- 146
Query: 497 CENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDA------------------ 538
E+ +IHRD+K +N +L++ + ++ DFGLAR + +K +
Sbjct: 147 -ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 539 ---TVAAGTMGYLAPEY-LLTGRATEKTDVFSYGAVVLEV 574
T T Y APE LL T+ D++S G + E+
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 40/227 (17%)
Query: 376 RSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGT--L 433
R+ K + IG G +G V+ G G+ +AVK + + E I T +
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMG--KWRGEKVAVKVFFTTEEA--SWFRETEIYQTVLM 88
Query: 434 RHRNLVRLQGWCHEKG-----EILLVYDLMPNGSLDKAL----FEARSPLPWPHRSKILL 484
RH N++ KG ++ L+ D NGSL L +A+S L K+
Sbjct: 89 RHENILGFIA-ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSML------KLAY 141
Query: 485 GVASALAYLHQEC-----ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQV-----EHDK 534
S L +LH E + + HRD+K+ NI++ + + D GLA + E D
Sbjct: 142 SSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201
Query: 535 SPDATVAAGTMGYLAPEYLLTG------RATEKTDVFSYGAVVLEVA 575
P+ V GT Y+ PE L ++ D++S+G ++ EVA
Sbjct: 202 PPNTRV--GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA 246
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 9/198 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG Q+ +++AVK + + E+ +LRH N+VR +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ +V + G L + + A + S ++Y H QV HRD+K
Sbjct: 87 PTHLAIVMEYASGGELFERICNA-GRFSEDEARFFFQQLISGVSYCHA---MQVCHRDLK 142
Query: 508 TSNIMLDEGFNARLG--DFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKT-DV 564
N +LD RL FG ++ P TV GT Y+APE LL K DV
Sbjct: 143 LENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV--GTPAYIAPEVLLKKEYDGKVADV 200
Query: 565 FSYGAVVLEVASGRRPIE 582
+S G + + G P E
Sbjct: 201 WSCGVTLYVMLVGAYPFE 218
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 18/210 (8%)
Query: 377 SATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCS---HNSQGKDEFLSELSIIGTL 433
+ K + + IG GA G V G +AVK+ S N EL ++ +
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV 80
Query: 434 RHRNLVRL------QGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVA 487
H+N++ L Q E ++ LV +LM + +L + + L S +L +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI---HMELDHERMSYLLYQML 136
Query: 488 SALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGY 547
+ +LH +IHRD+K SNI++ ++ DFGLAR + T T Y
Sbjct: 137 CGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM--MTPYVVTRYY 191
Query: 548 LAPEYLLTGRATEKTDVFSYGAVVLEVASG 577
APE +L D++S G ++ E+ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 29/195 (14%)
Query: 425 SELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL------DKALFEARSPLPWPH 478
+E+ I+ L H +++++ + + + +V +LM G L +K L EA L +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---Y 258
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKS 535
++LL A+ YLH EN +IHRD+K N++L +E ++ DFG ++ + ++
Sbjct: 259 FYQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET 309
Query: 536 PDATVAAGTMGYLAPEYLL---TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVG-KV 591
GT YLAPE L+ T D +S G ++ SG P + T V K
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 369
Query: 592 GVAS---NLVEWVWS 603
+ S N + VW+
Sbjct: 370 QITSGKYNFIPEVWA 384
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 81/198 (40%), Gaps = 9/198 (4%)
Query: 388 IGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHE 447
IG G FG +++AVK + + E+ +LRH N+VR +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 448 KGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVK 507
+ ++ + G L + + A + S ++Y H Q+ HRD+K
Sbjct: 88 PTHLAIIMEYASGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLK 143
Query: 508 TSNIMLDEGFNARLG--DFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEK-TDV 564
N +LD RL DFG ++ P +TV GT Y+APE LL K DV
Sbjct: 144 LENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV--GTPAYIAPEVLLRQEYDGKIADV 201
Query: 565 FSYGAVVLEVASGRRPIE 582
+S G + + G P E
Sbjct: 202 WSCGVTLYVMLVGAYPFE 219
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 132/318 (41%), Gaps = 89/318 (27%)
Query: 384 ANRIIGHGAFGTV-YKGILPQNGDIIAVKR-----CSHNSQGKDEFLSELSIIG-TLRHR 436
+ +I+G+G+ GTV ++G G +AVKR C D L E+ ++ + H
Sbjct: 19 SEKILGYGSSGTVVFQGSF--QGRPVAVKRMLIDFC-------DIALMEIKLLTESDDHP 69
Query: 437 NLVRLQGWCHEKGEILL----------VYDLMPNGSL-DKALFEARSPLPWPHRSKILLG 485
N++R +C E + L + DL+ + ++ D+ L + P +L
Sbjct: 70 NVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI----SLLRQ 123
Query: 486 VASALAYLHQECENQVIHRDVKTSNIMLD-------------EGFNARLGDFGLARQVEH 532
+AS +A+LH ++IHRD+K NI++ E + DFGL ++++
Sbjct: 124 IASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 533 DKSPDAT---VAAGTMGYLAPEYL-------LTGRATEKTDVFSYGAVVLEVAS-GRRPI 581
+S T +GT G+ APE L R T D+FS G V + S G+ P
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 582 EKEITGVGKVGVASNLVEWVWS------LHREGRLLTAADARLEGQFDEAEMRRVLLVGL 635
K SN++ ++S LH + A D L+
Sbjct: 241 G------DKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD----------------LISQ 278
Query: 636 ACSHPDPLARPTMRGVVQ 653
H DPL RPT V++
Sbjct: 279 MIDH-DPLKRPTAMKVLR 295
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 29/195 (14%)
Query: 425 SELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSL------DKALFEARSPLPWPH 478
+E+ I+ L H +++++ + + + +V +LM G L +K L EA L +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL---Y 244
Query: 479 RSKILLGVASALAYLHQECENQVIHRDVKTSNIML---DEGFNARLGDFGLARQVEHDKS 535
++LL A+ YLH EN +IHRD+K N++L +E ++ DFG ++ + ++
Sbjct: 245 FYQMLL----AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GET 295
Query: 536 PDATVAAGTMGYLAPEYLL---TGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVG-KV 591
GT YLAPE L+ T D +S G ++ SG P + T V K
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD 355
Query: 592 GVAS---NLVEWVWS 603
+ S N + VW+
Sbjct: 356 QITSGKYNFIPEVWA 370
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 382 FNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGK----DEFLSELSIIGTLRHRN 437
F+ + +G G+FG V ++G+ A+K K + L+E I+ +
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 438 LVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQEC 497
LV+L+ + + +V + + G + L PH + YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFSEPHARFYAAQIVLTFEYLHSL- 160
Query: 498 ENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGR 557
+I+RD+K N+++D+ ++ DFG A++V+ GT YLAP +L+
Sbjct: 161 --DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----RTWXLCGTPEYLAPAIILSKG 214
Query: 558 ATEKTDVFSYGAVVLEVASGRRPI 581
+ D ++ G ++ E+A+G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 27 VITIS-TATEFDFGT--LTLASLKLLGDAHMNNGSVRLTR---DVTVPYDGAGKALYSKP 80
V TIS + +EF+ G LTL L+ +G ++LT+ + +D G+ LY+KP
Sbjct: 1 VETISFSFSEFEPGNDNLTLQGASLI----TQSGVLQLTKINQNGMPAWDSTGRTLYAKP 56
Query: 81 VRFRLPGTHTPAXXXXXXXXXITNLNPSSIGA-GLAFVITPDGEQVGSAGGSLGLLDEKG 139
V T T A I + A GL F + P + GG LG+ +
Sbjct: 57 VHIWDMTTGTVASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSKPAQGGGYLGIFNNSK 116
Query: 140 AGLGF--VAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWI 197
+ + VEFDT + ++ H+G+D+NS+ S + T L +G + N I
Sbjct: 117 QDNSYQTLGVEFDTFSN-QWDPPQVPHIGIDVNSIRS-----IKTQPFQLDNGQVANVVI 170
Query: 198 EYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST 244
+YD ++ + + Y + + ++ +D+ Q + +++ VG SG+T
Sbjct: 171 KYDASSKILHAVLVYPS-SGAIYTIAEIVDVKQVLPEWVDVGLSGAT 216
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 21/211 (9%)
Query: 379 TKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNL 438
T + IG G++ + I AVK + + E + L G +H N+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYG--QHPNI 78
Query: 439 VRLQGWCHEKGEILLVYDLMPNGSL-DKAL----FEARSPLPWPHRSKILLGVASALAYL 493
+ L+ + + +V +L G L DK L F R S +L + + YL
Sbjct: 79 ITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREA------SAVLFTITKTVEYL 132
Query: 494 HQECENQVIHRDVKTSNIM-LDEGFNA---RLGDFGLARQVEHDKSPDATVAAGTMGYLA 549
H + V+HRD+K SNI+ +DE N R+ DFG A+Q+ + T T ++A
Sbjct: 133 HAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT-PCYTANFVA 188
Query: 550 PEYLLTGRATEKTDVFSYGAVVLEVASGRRP 580
PE L D++S G ++ +G P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,660,671
Number of Sequences: 62578
Number of extensions: 747079
Number of successful extensions: 4384
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 272
Number of HSP's that attempted gapping in prelim test: 1928
Number of HSP's gapped (non-prelim): 1245
length of query: 711
length of database: 14,973,337
effective HSP length: 106
effective length of query: 605
effective length of database: 8,340,069
effective search space: 5045741745
effective search space used: 5045741745
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)