Citrus Sinensis ID: 043702

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-
MLLFSCKILTSLNLSLVFCLFVINNAVITISTATEFDFGTLTLASLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPASFSTFFSFSITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQGSTEIHSIEWWSFSSSFESNSGTGSGSAPPPPTASLMNPTANSVKSPPPSLAPSGSSTTQKSSKSSSCHNQLCKQGAGAVAGVVTASAFFAIFAGVLIWFFSKRYKHVKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRAKPSMTFSTSHLLLSLQDSVSDCNGMITLSSSSSENDFIHGDHLV
cccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEEcccccccccEEEccEEECcccEEEccccccccccEEEEEEcccEECccccccccccEEEEEEEEEECcccccccccEEEEEcccccccccccccccccccccccccEEEEEEEcccccccccccccccEEEEcccccccccccccccEEEcccccEEEEEEECccccEEEEEEECccccccccEEEEEccccccccccEEEEEEccccccccEEEEEEEEECccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEHHHHHHHHHHHHHHHHHHEEEEEcccccccccccccccccccEEEHHHHHHHHccccccccccccccccEEEEECcccccEEEEEEccccccHHHHHHHHHHHHHcccccccccccEEEccccEEEEEEEccccccHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccEEECccccccccccccccccccccccEEEccccccccccCECccccccccccccccccccccccEEEcccEEEEEccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccc
*LLFSCKILTSLNLSLVFCLFVINNAVITISTATEFDFGTLTLASLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPASFSTFFSFSITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQGSTEIHSIEWWSFSSSFESNSGTGSGSAPPPPTASLMNPTANSVKS**************************CKQGAGAVAGVVTASAFFAIFAGVLIWFFSKRYKHVKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRAKPSMTFSTSHLLLSLQ****************************
xxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLLFSCKILTSLNLSLVFCLFVINNAVITISTATEFDFGTLTLASLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPASFSTFFSFSITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTEVDNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQGSTEIHSIEWWSFSSSFESNSGTGSGSAPPPPTASLMNPTANSVKSPPPSLAPSGSSTTQKSSKSSSCHNQLCKQGAGAVAGVVTASAFFAIFAGVLIWFFSKRYKHVKKSESFTSDIIRMPKEFSYRELRSATKCFNANRIIGHGAFGTVYKGILPQNGDIIAVKRCSHNSQGKDEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARSPLPWPHRSKILLGVASALAYLHQECENQVIHRDVKTSNIMLDEGFNARLGDFGLARQVEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKEITGVGKVGVASNLVEWVWSLHREGRLLTAADARLEGQFDEAEMRRVLLVGLACSHPDPLARPTMRGVVQMLVGEAEVPIVPRAKPSMTFSTSHLLLSLQDSVSDCNGMITLSSSSSENDFIHGDHLV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
L-type lectin-domain containing receptor kinase VIII.1 confidentQ9LFH9

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.11.-Protein-serine/threonine kinases.probable
2.7.11.1Transferred entry: 2.7.11.19.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3UIM, chain A
Confidence level:very confident
Coverage over the Query: 366-661
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Template: 1HQL, chain A
Confidence level:very confident
Coverage over the Query: 33-262
View the alignment between query and template
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Template: 3UJO, chain A
Confidence level:very confident
Coverage over the Query: 31-264
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Template: 4GS6, chain A
Confidence level:confident
Coverage over the Query: 380-525,543-684
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View the model in PyMOL
Template: 3TKU, chain A
Confidence level:probable
Coverage over the Query: 341-591
View the alignment between query and template
View the model in PyMOL