Your job contains 1 sequence.
>043705
MQAVLLHKISPPRFLSPLTALRPLQKVSTPQAKIPRAVSLTKPDNNQVSISTPTTVQAEI
DDSTAAFWDYQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVH
PLDGHGYLRAFEFDGVTGEVKYMAKYVKTDAQVEEHDPQTDTWRFTHRGPFSVLKGGKKF
GNTKVMKNVANTSVLKWGGKLLCLWEGGDPYEIESGTLDTIGQLQMMDGGDSLGKNSKDL
WDVAAEMLKPILYGVFKMPPKRLLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTFYEFDS
NFKLLNKQEFNILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNP
SKPTSPVYLLPRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSC
SYEWFNFQNLFGYNWQSGRLDPSIMNLKESEYQLLPHLVQVSISLDVDGNCQKCTVEPLN
QWKKSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGT
RRFIGEPIFVPKGVEEDDGYLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLN
FPLGFHGFWDNNTW
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043705
(614 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q7XU29 - symbol:OSJNBb0034G17.9 "OSJNBb0034G17.... 1755 7.8e-181 1
UNIPROTKB|Q28175 - symbol:RPE65 "Retinoid isomerohydrolas... 161 8.0e-15 2
UNIPROTKB|F1PXT9 - symbol:RPE65 "Retinoid isomerohydrolas... 161 8.0e-15 2
UNIPROTKB|F1S830 - symbol:RPE65 "Uncharacterized protein"... 161 8.0e-15 2
UNIPROTKB|Q16518 - symbol:RPE65 "Retinoid isomerohydrolas... 160 1.0e-14 2
ZFIN|ZDB-GENE-040426-1717 - symbol:rpe65a "retinal pigmen... 158 1.0e-14 2
UNIPROTKB|Q9TVB8 - symbol:RPE65 "Retinoid isomerohydrolas... 159 1.3e-14 2
UNIPROTKB|Q9YGX2 - symbol:RPE65 "Retinoid isomerohydrolas... 156 1.4e-14 2
MGI|MGI:98001 - symbol:Rpe65 "retinal pigment epithelium ... 154 4.7e-14 2
UNIPROTKB|Q746V1 - symbol:GSU3417 "Dioxygenase, putative"... 149 7.3e-14 3
TIGR_CMR|GSU_3417 - symbol:GSU_3417 "dioxygenase, putativ... 149 7.3e-14 3
TAIR|locus:2093751 - symbol:NCED6 "nine-cis-epoxycaroteno... 116 7.4e-14 3
TAIR|locus:2134093 - symbol:CCD8 "carotenoid cleavage dio... 131 1.0e-13 2
RGD|621396 - symbol:Rpe65 "retinal pigment epithelium 65"... 151 1.0e-13 2
WB|WBGene00018755 - symbol:bcmo-2 species:6239 "Caenorhab... 143 1.1e-11 3
ZFIN|ZDB-GENE-010508-1 - symbol:bcmo1a "beta-carotene 15,... 141 3.2e-11 2
TAIR|locus:2134796 - symbol:NCED4 "nine-cis-epoxycaroteno... 122 3.3e-11 3
ZFIN|ZDB-GENE-081104-505 - symbol:rpe65c "retinal pigment... 133 4.0e-11 2
ZFIN|ZDB-GENE-050410-16 - symbol:rpe65b "retinal pigment ... 132 6.5e-11 2
WB|WBGene00012914 - symbol:bcmo-1 species:6239 "Caenorhab... 125 1.4e-10 2
TAIR|locus:2202492 - symbol:NCED5 "nine-cis-epoxycaroteno... 120 1.6e-10 2
MGI|MGI:1926923 - symbol:Bcmo1 "beta-carotene 15,15'-mono... 134 2.5e-10 2
ZFIN|ZDB-GENE-060421-7448 - symbol:bco2b "beta-carotene o... 128 3.6e-10 3
TAIR|locus:2087418 - symbol:CCD1 "carotenoid cleavage dio... 109 5.7e-10 3
TAIR|locus:2091652 - symbol:NCED3 "nine-cis-epoxycaroteno... 119 3.7e-09 3
ASPGD|ASPL0000067272 - symbol:AN7062 species:162425 "Emer... 125 4.5e-09 2
TAIR|locus:2124489 - symbol:NCED2 "nine-cis-epoxycaroteno... 97 4.8e-09 3
ZFIN|ZDB-GENE-040426-1191 - symbol:bcmo1b "beta-carotene ... 113 7.3e-09 2
TAIR|locus:2032085 - symbol:NCED9 "nine-cis-epoxycaroteno... 102 4.4e-08 3
UNIPROTKB|Q52008 - symbol:lsdB "Lignostilbene-alpha,beta-... 89 5.9e-08 3
UNIPROTKB|F1P321 - symbol:RPE65 "Retinoid isomerohydrolas... 156 6.2e-08 1
UNIPROTKB|F1NE28 - symbol:RPE65 "Retinoid isomerohydrolas... 156 6.4e-08 1
RGD|70981 - symbol:Bcmo1 "beta-carotene 15,15'-monooxygen... 116 7.3e-08 2
UNIPROTKB|Q91XT5 - symbol:Bcmo1 "Beta,beta-carotene 15,15... 116 7.3e-08 2
ASPGD|ASPL0000049803 - symbol:AN1704 species:162425 "Emer... 121 9.0e-08 2
ZFIN|ZDB-GENE-010509-1 - symbol:bco2l "beta-carotene 15, ... 99 1.2e-07 3
UNIPROTKB|Q9I993 - symbol:BCMO1 "Beta,beta-carotene 15,15... 113 1.6e-07 2
UNIPROTKB|E1C8E0 - symbol:BCO2 "Uncharacterized protein" ... 129 2.3e-07 2
UNIPROTKB|Q9HAY6 - symbol:BCMO1 "Beta,beta-carotene 15,15... 100 2.8e-06 2
MGI|MGI:2177469 - symbol:Bco2 "beta-carotene oxygenase 2"... 119 3.3e-06 2
UNIPROTKB|Q53353 - symbol:Q53353 "Lignostilbene-alpha,bet... 89 2.7e-05 3
UNIPROTKB|Q8HXG8 - symbol:BCO2 "Beta,beta-carotene 9',10'... 119 0.00013 3
UNIPROTKB|Q9BYV7 - symbol:BCO2 "Beta,beta-carotene 9',10'... 117 0.00014 2
UNIPROTKB|Q83CU2 - symbol:CBU_1011 "Lignostilbene-alpha,b... 125 0.00034 2
TIGR_CMR|CBU_1011 - symbol:CBU_1011 "dioxygenase, putativ... 125 0.00034 2
UNIPROTKB|F1N3B7 - symbol:BCMO1 "Uncharacterized protein"... 83 0.00094 2
>UNIPROTKB|Q7XU29 [details] [associations]
symbol:OSJNBb0034G17.9 "OSJNBb0034G17.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0016121 "carotene catabolic process"
evidence=ISS] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS] GO:GO:0009570 GO:GO:0009733 GO:GO:0009926
EMBL:AP008210 EMBL:CM000141 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 GO:GO:0010223
GO:GO:0045549 GO:GO:0016124 EMBL:AL663000 RefSeq:NP_001053491.1
UniGene:Os.26493 UniGene:Os.56287 UniGene:Os.7470
EnsemblPlants:LOC_Os04g46470.1 GeneID:4336591 KEGG:osa:4336591
HOGENOM:HOG000240947 OMA:VMKNVAN ProtClustDB:PLN02969
Uniprot:Q7XU29
Length = 609
Score = 1755 (622.8 bits), Expect = 7.8e-181, P = 7.8e-181
Identities = 323/565 (57%), Positives = 417/565 (73%)
Query: 58 AEIDDSTAAFWDYQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGS 117
AE D +AAFWDY LF SQR E I L + +GAIP DFP+GTYYL GPG+F+DDHGS
Sbjct: 44 AETDTLSAAFWDYNLLFRSQRDECLDSIPLRVTEGAIPPDFPAGTYYLAGPGIFSDDHGS 103
Query: 118 TVHPLDGHGYLRAFEFDGVTGEVKYMAKYVKTDAQVEEHDPQTDTWRFTHRGPFSVLKGG 177
TVHPLDGHGYLR+F F + Y A++V+T A+ EE +WRFTHRGPFSVL+GG
Sbjct: 104 TVHPLDGHGYLRSFRFRPGDRTIHYSARFVETAAKREESRDGA-SWRFTHRGPFSVLQGG 162
Query: 178 KKFGNTKVMKNVANTSVLKWGGKLLCLWEGGDPYEIESGTLDTIGQLQMMD---GGDSLG 234
KK GN KVMKNVANTSVL+WGG+LLCLWEGG PYE++ TL+T+G ++ D+
Sbjct: 163 KKVGNVKVMKNVANTSVLRWGGRLLCLWEGGQPYEVDPRTLETVGPFDLLGLAAADDNKA 222
Query: 235 KNSKDL---W------DVAAEMLKPILYGVFKMPPKRLLSHYKLDAPRNRLLTVSCNAED 285
N+ W D AA +L+P+L GVF MP KRLL+HYK+D R RLL V+CNAED
Sbjct: 223 TNASAARRPWLQEAGLDAAARLLRPVLSGVFDMPGKRLLAHYKIDPRRGRLLMVACNAED 282
Query: 286 MLLPRSNFTFYEFDSNFKLLNKQEFNILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTA 345
MLLPRS+FTFYEFD++F L+ K+EF + DHLMIHDWAFTDTHYIL NR+KLD+ GS+ A
Sbjct: 283 MLLPRSHFTFYEFDAHFDLVQKREFVVPDHLMIHDWAFTDTHYILLGNRIKLDIPGSLLA 342
Query: 346 VSGLSPMISALSVNPSKPTSPVYLLPRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELK 405
++G PMI+AL+V+P + ++PVYLLPR P G RDW VP+EAPSQMW +HVGNAFE
Sbjct: 343 LTGTHPMIAALAVDPRRQSTPVYLLPRSPETEAGGRDWSVPIEAPSQMWSVHVGNAFEEA 402
Query: 406 DVDGNTEIQIHACSCSYEWFNFQNLFGYNWQSGRLDPSIMNLKESEYQLLPHLVQVSISL 465
+ G ++++H SCSY+WF+F +FGYNW +LDPS MN + + + LP LVQV+I L
Sbjct: 403 NRRGGLDVRLHMSSCSYQWFHFHRMFGYNWHHKKLDPSFMNAAKGK-EWLPRLVQVAIEL 461
Query: 466 DVDGNCQKCTVEPLN-QWKKSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDTVV 524
D G C++C+V L+ Q + +DFP INP+Y+ Q+ +YA + G+RR LP+FPFD+VV
Sbjct: 462 DRTGECRRCSVRRLSDQHARPADFPAINPSYANQRNRFVYAGAASGSRRFLPYFPFDSVV 521
Query: 525 KLNVLTKSVQTWSVGTRRFIGEPIFVPKGVEEDDGYLLVIEYAVSIQRCYLIILNPKKIG 584
K++V S + WS R+F+GEP+FVP G ED GY+L++EYAVS RC+L++L+ KKIG
Sbjct: 522 KVDVSDGSARWWSTDGRKFVGEPVFVPTGGGEDGGYVLLVEYAVSKHRCHLVVLDAKKIG 581
Query: 585 EGDALVARLEVPRHLNFPLGFHGFW 609
+ALVA+LEVP++L FP+GFHGFW
Sbjct: 582 TENALVAKLEVPKNLTFPMGFHGFW 606
>UNIPROTKB|Q28175 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9913 "Bos
taurus" [GO:0031090 "organelle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0052885 "all-trans-retinyl-ester hydrolase,
11-cis retinol forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 EMBL:L11356 EMBL:X66277 IPI:IPI00711777 PIR:A47143
RefSeq:NP_776878.1 UniGene:Bt.108 PDB:3FSN PDB:3KVC PDB:4F2Z
PDB:4F30 PDB:4F3A PDB:4F3D PDBsum:3FSN PDBsum:3KVC PDBsum:4F2Z
PDBsum:4F30 PDBsum:4F3A PDBsum:4F3D ProteinModelPortal:Q28175
DIP:DIP-48993N STRING:Q28175 PRIDE:Q28175
Ensembl:ENSBTAT00000043702 GeneID:282043 KEGG:bta:282043 CTD:6121
InParanoid:Q28175 KO:K11158 BRENDA:5.2.1.7 EvolutionaryTrace:Q28175
NextBio:20805904 Uniprot:Q28175
Length = 533
Score = 161 (61.7 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 51/132 (38%), Positives = 67/132 (50%)
Query: 483 KKSSDFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTR 541
+++ +FP IN Y G+ T Y LG L HF D + KLNV TK W
Sbjct: 413 RQAFEFPQINYQKYGGKPYTYAYG---LG----LNHFVPDRLCKLNVKTKETWVWQEPDS 465
Query: 542 RFIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPR 597
+ EPIFV P +EEDDG +L V+ + YL+ILN K + E VAR EV
Sbjct: 466 -YPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE----VARAEV-- 518
Query: 598 HLNFPLGFHGFW 609
+N P+ FHG +
Sbjct: 519 EINIPVTFHGLF 530
Score = 108 (43.1 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ LF + E ++P+T H V G IP + +G+ GPGLF H DG L
Sbjct: 12 YKKLFETVE-ELSSPLTAH-VTGRIPL-WLTGSLLRCGPGLFEVGSEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
F+F G V Y ++++TDA V
Sbjct: 69 KFDFK--EGHVTYHRRFIRTDAYV 90
>UNIPROTKB|F1PXT9 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:WLHVADK EMBL:AAEX03004935
EMBL:AAEX03004936 Ensembl:ENSCAFT00000032537 Uniprot:F1PXT9
Length = 533
Score = 161 (61.7 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 51/132 (38%), Positives = 67/132 (50%)
Query: 483 KKSSDFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTR 541
+++ +FP IN Y G+ T Y LG L HF D + KLNV TK W
Sbjct: 413 RQAFEFPQINYQKYGGKPYTYAYG---LG----LNHFVPDRLCKLNVKTKETWVWQEPDS 465
Query: 542 RFIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPR 597
+ EPIFV P +EEDDG +L V+ + YL+ILN K + E VAR EV
Sbjct: 466 -YPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE----VARAEV-- 518
Query: 598 HLNFPLGFHGFW 609
+N P+ FHG +
Sbjct: 519 EINIPVTFHGLF 530
Score = 108 (43.1 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ LF + E ++P+T H V G IP + +G+ GPGLF H DG L
Sbjct: 12 YKKLFETVE-ELSSPLTAH-VTGRIPL-WLTGSLLRCGPGLFEVGSEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
F+F G V Y ++++TDA V
Sbjct: 69 KFDFK--EGHVTYHRRFIRTDAYV 90
>UNIPROTKB|F1S830 [details] [associations]
symbol:RPE65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071257 "cellular response to electrical stimulus"
evidence=IEA] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0004744
"retinal isomerase activity" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:CU929726 Ensembl:ENSSSCT00000004199
Uniprot:F1S830
Length = 533
Score = 161 (61.7 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 51/132 (38%), Positives = 67/132 (50%)
Query: 483 KKSSDFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTR 541
+++ +FP IN Y G+ T Y LG L HF D + KLNV TK W
Sbjct: 413 RQAFEFPQINYQKYGGKPYTYAYG---LG----LNHFVPDRLCKLNVKTKETWVWQEPDS 465
Query: 542 RFIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPR 597
+ EPIFV P +EEDDG +L V+ + YL+ILN K + E VAR EV
Sbjct: 466 -YPSEPIFVAHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE----VARAEV-- 518
Query: 598 HLNFPLGFHGFW 609
+N P+ FHG +
Sbjct: 519 EINIPVTFHGLF 530
Score = 108 (43.1 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ LF + E ++P+T H V G IP + +G+ GPGLF H DG L
Sbjct: 12 YRKLFETVE-ELSSPLTAH-VTGRIPL-WLTGSLLRCGPGLFEVGSEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
F+F G V Y ++++TDA V
Sbjct: 69 KFDFK--EGHVTYHRRFIRTDAYV 90
>UNIPROTKB|Q16518 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0004744 "retinal isomerase activity" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0042574 "retinal metabolic
process" evidence=IEA] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0031090 "organelle membrane" evidence=IEA]
[GO:0006776 "vitamin A metabolic process" evidence=TAS]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 EMBL:CH471059
GO:GO:0007601 Orphanet:791 GO:GO:0050896 GO:GO:0016853 Orphanet:65
GO:GO:0006776 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 Orphanet:180 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:U18991
EMBL:U20510 EMBL:U20476 EMBL:U20477 EMBL:U20478 EMBL:U20479
EMBL:U20481 EMBL:U20482 EMBL:U20484 EMBL:U20485 EMBL:U20486
EMBL:AF039868 EMBL:AF039855 EMBL:AF039856 EMBL:AF039857
EMBL:AF039858 EMBL:AF039859 EMBL:AF039860 EMBL:AF039861
EMBL:AF039862 EMBL:AF039863 EMBL:AF039864 EMBL:AF039865
EMBL:AF039866 EMBL:AF039867 EMBL:AL139413 EMBL:BC075035
EMBL:BC075036 IPI:IPI00029250 RefSeq:NP_000320.1 UniGene:Hs.2133
ProteinModelPortal:Q16518 SMR:Q16518 STRING:Q16518
PhosphoSite:Q16518 DMDM:44888872 PRIDE:Q16518
Ensembl:ENST00000262340 GeneID:6121 KEGG:hsa:6121 UCSC:uc001dei.1
GeneCards:GC01M068894 HGNC:HGNC:10294 MIM:180069 MIM:204100
MIM:613794 neXtProt:NX_Q16518 PharmGKB:PA34655 InParanoid:Q16518
OMA:WLHVADK PhylomeDB:Q16518 BioCyc:MetaCyc:ENSG00000116745-MONOMER
ChiTaRS:RPE65 GenomeRNAi:6121 NextBio:23773 ArrayExpress:Q16518
Bgee:Q16518 CleanEx:HS_RPE65 Genevestigator:Q16518
GermOnline:ENSG00000116745 Uniprot:Q16518
Length = 533
Score = 160 (61.4 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 51/132 (38%), Positives = 67/132 (50%)
Query: 483 KKSSDFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTR 541
+++ +FP IN Y G+ T Y LG L HF D + KLNV TK W
Sbjct: 413 RQAFEFPQINYQKYCGKPYTYAYG---LG----LNHFVPDRLCKLNVKTKETWVWQEPDS 465
Query: 542 RFIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPR 597
+ EPIFV P +EEDDG +L V+ + YL+ILN K + E VAR EV
Sbjct: 466 -YPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE----VARAEV-- 518
Query: 598 HLNFPLGFHGFW 609
+N P+ FHG +
Sbjct: 519 EINIPVTFHGLF 530
Score = 108 (43.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ LF + E ++P+T H V G IP + +G+ GPGLF H DG L
Sbjct: 12 YKKLFETVE-ELSSPLTAH-VTGRIPL-WLTGSLLRCGPGLFEVGSEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
F+F G V Y ++++TDA V
Sbjct: 69 KFDFK--EGHVTYHRRFIRTDAYV 90
>ZFIN|ZDB-GENE-040426-1717 [details] [associations]
symbol:rpe65a "retinal pigment epithelium-specific
protein 65a" species:7955 "Danio rerio" [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
ZFIN:ZDB-GENE-040426-1717 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AY646886 EMBL:FP102801 EMBL:BC059559
IPI:IPI00485811 RefSeq:NP_957045.1 UniGene:Dr.12451
ProteinModelPortal:Q6PBW5 STRING:Q6PBW5 Ensembl:ENSDART00000004533
GeneID:393724 KEGG:dre:393724 CTD:393724 InParanoid:Q6PBW5
OMA:TSMEFPR OrthoDB:EOG47M1XK NextBio:20814725 Bgee:Q6PBW5
GO:GO:0052885 GO:GO:0052884 Uniprot:Q6PBW5
Length = 531
Score = 158 (60.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 83/320 (25%), Positives = 142/320 (44%)
Query: 318 IHDWAFTDTHYILFANRVKLDVLGSMTA--VSGLSPMISALSVNPSKPTSPVYLLPRFPN 375
+H + T+ +++ VK+++L ++A + G S + + K T +++ + P
Sbjct: 240 VHSFGMTENYFVFVETPVKINLLKFLSAWSIRG-SNYMDCFESDEEKGTW-IHIARKHPG 297
Query: 376 KSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCS-YEW-FNFQNLFGY 433
+ + D++ A M L H N +E D I C+ +E+ +N+ L
Sbjct: 298 EYI---DYKFRTSA---MGLFHHINCYE----DSGF-IVFDLCAWKGFEFVYNYLWLANL 346
Query: 434 --NWQSGRLDPSIMNLKESEYQLLP----------HLVQV-----SISLDVDGNCQKCTV 476
NW+ + + I E ++P +L+ + + ++ DG +
Sbjct: 347 RANWEEVKRNAMIAPQPEVRRYVIPLDPFREEQGKNLISLPYTTATATMRADGTIW---L 403
Query: 477 EP---LNQWKKSSDFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKS 532
EP + +++ +FP IN +G+ T Y LG L HF D + KLNV TK
Sbjct: 404 EPEVLFSGPRQAFEFPQINYRMVNGKNYTYAYG---LG----LNHFVPDRICKLNVRTKE 456
Query: 533 VQTWSVGTRRFIGEPIFV--PKGVEEDDGYLLVIEYAVSIQR-CYLIILNPKKIGEGDAL 589
W + EP+FV P GV+EDDG L+ I + QR Y +ILN K + E
Sbjct: 457 TWVWQEPDS-YPSEPLFVQTPDGVDEDDGILMTIVVSPGAQRPTYCLILNAKDLSE---- 511
Query: 590 VARLEVPRHLNFPLGFHGFW 609
+AR EV + P+ FHG +
Sbjct: 512 IARAEV--EILTPVTFHGMY 529
Score = 110 (43.8 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 31/84 (36%), Positives = 40/84 (47%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ +F + E P+ V G IPS F G+ GPGLF H DG +
Sbjct: 12 YKKIFETAE-ELNEPLPA-TVTGRIPS-FIKGSLLRLGPGLFEAGAEPFYHLFDGQALMH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
F+F G+V Y K+VKTDA V
Sbjct: 69 KFDFSN--GQVTYFRKFVKTDAYV 90
>UNIPROTKB|Q9TVB8 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0031090 "organelle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0052885 "all-trans-retinyl-ester hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] GO:GO:0005783 GO:GO:0005886 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF084537
EMBL:Y16567 EMBL:AJ506754 EMBL:AJ506755 EMBL:AJ506756 EMBL:AJ506757
EMBL:AJ251207 EMBL:AJ506759 RefSeq:NP_001003176.1 UniGene:Cfa.3665
ProteinModelPortal:Q9TVB8 STRING:Q9TVB8 GeneID:403803
KEGG:cfa:403803 InParanoid:Q9TVB8 NextBio:20817300 Uniprot:Q9TVB8
Length = 533
Score = 159 (61.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 52/131 (39%), Positives = 67/131 (51%)
Query: 483 KKSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRR 542
+++ +FP IN SG K YA LG L HF D + KLNV TK W
Sbjct: 413 RQAFEFPQINYQKSGGKPYT-YAY-GLG----LNHFVPDRLCKLNVKTKETWVWQEPDS- 465
Query: 543 FIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRH 598
+ EPIFV P +EEDDG +L V+ + YL+ILN K + E VAR EV
Sbjct: 466 YPSEPIFVSHPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSE----VARAEV--E 519
Query: 599 LNFPLGFHGFW 609
+N P+ FHG +
Sbjct: 520 INIPVTFHGLF 530
Score = 108 (43.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ LF + E ++P+T H V G IP + +G+ GPGLF H DG L
Sbjct: 12 YKKLFETVE-ELSSPLTAH-VTGRIPL-WLTGSLLRCGPGLFEVGSEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
F+F G V Y ++++TDA V
Sbjct: 69 KFDFK--EGHVTYHRRFIRTDAYV 90
>UNIPROTKB|Q9YGX2 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0052884 "all-trans-retinyl-palmitate hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052885
"all-trans-retinyl-ester hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] GO:GO:0005783
GO:GO:0005886 GO:GO:0046872 GO:GO:0007601 GO:GO:0050896
GO:GO:0016853 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AB017594 IPI:IPI00584895
RefSeq:NP_990215.1 UniGene:Gga.408 ProteinModelPortal:Q9YGX2
STRING:Q9YGX2 GeneID:395700 KEGG:gga:395700 InParanoid:Q9YGX2
NextBio:20815770 Uniprot:Q9YGX2
Length = 533
Score = 156 (60.0 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 52/128 (40%), Positives = 64/128 (50%)
Query: 487 DFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIG 545
+FP IN Y G+ T Y LG L HF D + KLNV TK W +
Sbjct: 417 EFPQINYKKYGGKPYTYTYG---LG----LNHFVPDRLCKLNVKTKETWVWQEPDS-YPS 468
Query: 546 EPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNF 601
EPIFV P +EEDDG +L VI + YL+ILN K + E VAR EV +N
Sbjct: 469 EPIFVSHPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSE----VARAEV--EVNI 522
Query: 602 PLGFHGFW 609
P+ FHG +
Sbjct: 523 PVTFHGLF 530
Score = 111 (44.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 47/163 (28%), Positives = 71/163 (43%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ LF + E ++P+T H V G IP+ + G+ GPGLF H DG L
Sbjct: 12 YKKLFETVE-ELSSPVTAH-VTGRIPT-WLRGSLLRCGPGLFEVGAEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV----EEHDPQTDTWRFTHRGPFSVL--KGGKKFGNT 183
F+F G V Y ++V+TDA V E+ T+ + + P + + F
Sbjct: 69 KFDFK--EGHVTYHRRFVRTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGV 126
Query: 184 KVMKNVANTSVLKWGGKLLCLWEGGDPYEIESGTLDTIGQLQM 226
+V N A +V G E +I TL+TI Q+ +
Sbjct: 127 EVTDN-ALVNVYPVGEDYYACTETNFITKINPDTLETIKQVDL 168
>MGI|MGI:98001 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10090
"Mus musculus" [GO:0004744 "retinal isomerase activity"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0008286 "insulin receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IMP]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0071257 "cellular response to electrical stimulus"
evidence=IMP] MGI:MGI:98001 GO:GO:0005783 GO:GO:0005886
GO:GO:0008286 GO:GO:0046872 GO:GO:0007601 GO:GO:0042574
eggNOG:COG3670 HOGENOM:HOG000232156 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090
GO:GO:0007468 GO:GO:0071257 GO:GO:0060042 GO:GO:0004744
OrthoDB:EOG47M1XK GO:GO:0052885 GO:GO:0052884 EMBL:AF410461
EMBL:AC163272 EMBL:AH011240 IPI:IPI00131304 UniGene:Mm.131708
ProteinModelPortal:Q91ZQ5 SMR:Q91ZQ5 STRING:Q91ZQ5
PhosphoSite:Q91ZQ5 PRIDE:Q91ZQ5 InParanoid:Q91ZQ5 CleanEx:MM_RPE65
Genevestigator:Q91ZQ5 GermOnline:ENSMUSG00000028174 Uniprot:Q91ZQ5
Length = 533
Score = 154 (59.3 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 48/132 (36%), Positives = 67/132 (50%)
Query: 483 KKSSDFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTR 541
+++ +FP IN + G+ T Y LG L HF D + KLNV TK + W
Sbjct: 413 RQAFEFPQINYQKFGGKPYTYAYG---LG----LNHFVPDKLCKLNVKTKEIWMWQEPDS 465
Query: 542 RFIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPR 597
+ EPIFV P +EEDDG +L V+ + YL++LN K + E +AR EV
Sbjct: 466 -YPSEPIFVSQPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSE----IARAEV-- 518
Query: 598 HLNFPLGFHGFW 609
N P+ FHG +
Sbjct: 519 ETNIPVTFHGLF 530
Score = 108 (43.1 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ LF + E ++P+T H V G IP + +G+ GPGLF H DG L
Sbjct: 12 YKKLFETVE-ELSSPLTAH-VTGRIPL-WLTGSLLRCGPGLFEVGSEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
F+F G V Y ++++TDA V
Sbjct: 69 KFDFK--EGHVTYHRRFIRTDAYV 90
>UNIPROTKB|Q746V1 [details] [associations]
symbol:GSU3417 "Dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 149 (57.5 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 47/137 (34%), Positives = 66/137 (48%)
Query: 90 VDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPL-DGHGYLRAFEFDGVTGEVKYMAKYVK 148
V+G IP+ GT Y GP LF D G L DG G ++AF F G G ++Y ++V+
Sbjct: 60 VEGTIPAGL-RGTLYRNGPALF-DRGGMRKRTLLDGDGMVQAFRF-GDRG-IRYANRFVR 115
Query: 149 TDAQVEEHDPQTDTWRFTHRGPFSVLKGG--KKFGNTKVMKNVANTSVLKWGGKLLCLWE 206
T VEE RF H + GG T+ + + A +V W G+L E
Sbjct: 116 TRKFVEEEA----AGRFLHPTWSTQAPGGIWTNVWPTERLLSQAGITVFPWRGRLYAFDE 171
Query: 207 GGDPYEIESGTLDTIGQ 223
PYE++ TL T+G+
Sbjct: 172 SSFPYELDPDTLATVGE 188
Score = 100 (40.3 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 513 RALP-HFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPKG--VEEDDGYLLVIEYAVS 569
R LP F + V+ L+ +T +S G + EP+F P+ + G+LLV Y
Sbjct: 410 RCLPGEFFWSIVMGLDPVTGRTDEYSFGRGVYCTEPVFAPRPDTLAGGPGWLLVELYDSR 469
Query: 570 IQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHGFW 609
+ L IL+ +I +G + RL H+ P +HG+W
Sbjct: 470 TRTSSLAILDADRIADGPLALVRLT--HHV--PFSYHGWW 505
Score = 52 (23.4 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 15/76 (19%), Positives = 32/76 (42%)
Query: 289 PRSNFTFYEFDSNFKLLNKQEFNILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTAVSG 348
PR+ F+++ L + + + +HDW T+ H + + V++ + G
Sbjct: 222 PRTFVHLTTFNADGTLRRHRALELPRAIYMHDWFVTERHVVFHLHPVEI---AYWPFLLG 278
Query: 349 LSPMISALSVNPSKPT 364
+ M +L P + T
Sbjct: 279 IRSMAESLRWRPERGT 294
>TIGR_CMR|GSU_3417 [details] [associations]
symbol:GSU_3417 "dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 149 (57.5 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 47/137 (34%), Positives = 66/137 (48%)
Query: 90 VDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPL-DGHGYLRAFEFDGVTGEVKYMAKYVK 148
V+G IP+ GT Y GP LF D G L DG G ++AF F G G ++Y ++V+
Sbjct: 60 VEGTIPAGL-RGTLYRNGPALF-DRGGMRKRTLLDGDGMVQAFRF-GDRG-IRYANRFVR 115
Query: 149 TDAQVEEHDPQTDTWRFTHRGPFSVLKGG--KKFGNTKVMKNVANTSVLKWGGKLLCLWE 206
T VEE RF H + GG T+ + + A +V W G+L E
Sbjct: 116 TRKFVEEEA----AGRFLHPTWSTQAPGGIWTNVWPTERLLSQAGITVFPWRGRLYAFDE 171
Query: 207 GGDPYEIESGTLDTIGQ 223
PYE++ TL T+G+
Sbjct: 172 SSFPYELDPDTLATVGE 188
Score = 100 (40.3 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 30/100 (30%), Positives = 48/100 (48%)
Query: 513 RALP-HFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPKG--VEEDDGYLLVIEYAVS 569
R LP F + V+ L+ +T +S G + EP+F P+ + G+LLV Y
Sbjct: 410 RCLPGEFFWSIVMGLDPVTGRTDEYSFGRGVYCTEPVFAPRPDTLAGGPGWLLVELYDSR 469
Query: 570 IQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHGFW 609
+ L IL+ +I +G + RL H+ P +HG+W
Sbjct: 470 TRTSSLAILDADRIADGPLALVRLT--HHV--PFSYHGWW 505
Score = 52 (23.4 bits), Expect = 7.3e-14, Sum P(3) = 7.3e-14
Identities = 15/76 (19%), Positives = 32/76 (42%)
Query: 289 PRSNFTFYEFDSNFKLLNKQEFNILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTAVSG 348
PR+ F+++ L + + + +HDW T+ H + + V++ + G
Sbjct: 222 PRTFVHLTTFNADGTLRRHRALELPRAIYMHDWFVTERHVVFHLHPVEI---AYWPFLLG 278
Query: 349 LSPMISALSVNPSKPT 364
+ M +L P + T
Sbjct: 279 IRSMAESLRWRPERGT 294
>TAIR|locus:2093751 [details] [associations]
symbol:NCED6 "nine-cis-epoxycarotenoid dioxygenase 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0009639 "response to red or far red light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0010114 GO:GO:0009688 GO:GO:0009535 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AB028621
ProtClustDB:PLN02258 IPI:IPI00526624 RefSeq:NP_189064.1
UniGene:At.37572 ProteinModelPortal:Q9LRM7 SMR:Q9LRM7 STRING:Q9LRM7
PaxDb:Q9LRM7 EnsemblPlants:AT3G24220.1 GeneID:822008
KEGG:ath:AT3G24220 TAIR:At3g24220 InParanoid:Q9LRM7 OMA:AWEERTE
PhylomeDB:Q9LRM7 BioCyc:MetaCyc:AT3G24220-MONOMER
Genevestigator:Q9LRM7 Uniprot:Q9LRM7
Length = 577
Score = 116 (45.9 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 71/269 (26%), Positives = 104/269 (38%)
Query: 12 PRFLSPLTALRPLQ-KVSTPQAKIPRAVSLTKPDNNQVSISTPTTVQAEIDDSTAAFWDY 70
P SP+ + P++ K + P + + ++ T D + SI P + T
Sbjct: 44 PDLTSPVPS--PVKLKPTYPNLNLLQKLAATMLDKIESSIVIPMEQNRPLPKPTDPAVQL 101
Query: 71 QFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPG-LFTDDHGSTVHPLDGHGYLR 129
F +E L +V G IPS G Y G +F G H DG G +
Sbjct: 102 SGNFAPV-NECPVQNGLEVV-GQIPSCL-KGVYIRNGANPMFPPLAGH--HLFDGDGMIH 156
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQVEEHD------PQTDTWRFTHRGP-----FSVLKGGK 178
A G +V Y +Y KT+ V+E P+ H G F+ G
Sbjct: 157 AVSI-GFDNQVSYSCRYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIG 215
Query: 179 KFGNTKVMKNVANTSVLKWGGKLLCLWEGGDPYEIE---SGTLDTIGQLQMMDGGDSLGK 235
T+ M VAN V+ + G+LL + E PY+++ G L+TIG+ D DS
Sbjct: 216 LVDGTRGM-GVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDS-SV 273
Query: 236 NSKDLWDVAAEMLKPILYGVFKMPPKRLL 264
+ D L + Y V K P R L
Sbjct: 274 IAHPKVDATTGDLHTLSYNVLKKPHLRYL 302
Score = 111 (44.1 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 34/118 (28%), Positives = 57/118 (48%)
Query: 491 INPTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFV 550
IN +Y G+K+ +Y A A P + K+++ +V ++ G RF GEP FV
Sbjct: 459 INRSYVGRKSQFVYIAI------ADPWPKCSGIAKVDIQNGTVSEFNYGPSRFGGEPCFV 512
Query: 551 PKGV-EEDDGYLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHG 607
P+G EED GY++ ++++ + + VA + +P + P GFHG
Sbjct: 513 PEGEGEEDKGYVMGFVRDEEKDESEFVVVDATDMKQ----VAAVRLPERV--PYGFHG 564
Score = 79 (32.9 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 24/91 (26%), Positives = 49/91 (53%)
Query: 263 LLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTFYEFDSNFKLLNKQEFNILDHLMIHDWA 322
+++H K+DA L T+S N +L + + + +F++ K E + + MIHD+A
Sbjct: 273 VIAHPKVDATTGDLHTLSYN----VLKKPHLRYLKFNTCGKKTRDVEITLPEPTMIHDFA 328
Query: 323 FTDTHYILFANRVKLDVLGSMTAVSGLSPMI 353
T+ ++++ ++ + L M + G SP+I
Sbjct: 329 ITE-NFVVIPDQQMVFKLSEM--IRGGSPVI 356
>TAIR|locus:2134093 [details] [associations]
symbol:CCD8 "carotenoid cleavage dioxygenase 8"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;RCA;NAS] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0010223 "secondary shoot formation"
evidence=IGI;IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009850 "auxin metabolic process"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0016121 "carotene catabolic process" evidence=IDA] [GO:0016124
"xanthophyll catabolic process" evidence=IDA] [GO:0009926 "auxin
polar transport" evidence=IMP] [GO:0009830 "cell wall modification
involved in abscission" evidence=RCA] GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009926 GO:GO:0046872
GO:GO:0016702 GO:GO:0009965 EMBL:AL161582 eggNOG:COG3670
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0016121 GO:GO:0010223 GO:GO:0016124 EMBL:AY074264
EMBL:AY133732 IPI:IPI00536697 PIR:T10688 RefSeq:NP_195007.2
UniGene:At.31633 ProteinModelPortal:Q8VY26 SMR:Q8VY26 STRING:Q8VY26
PRIDE:Q8VY26 EnsemblPlants:AT4G32810.1 GeneID:829417
KEGG:ath:AT4G32810 TAIR:At4g32810 HOGENOM:HOG000237971
InParanoid:Q8VY26 PhylomeDB:Q8VY26 ProtClustDB:CLSN2680232
BioCyc:ARA:AT4G32810-MONOMER BioCyc:MetaCyc:AT4G32810-MONOMER
Genevestigator:Q8VY26 Uniprot:Q8VY26
Length = 570
Score = 131 (51.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 67/231 (29%), Positives = 101/231 (43%)
Query: 387 VEAPSQMWLLHVGNAFEL-KDVDGNTEIQIHACSCSYEWFNFQNLFGYNWQSGRLDPSIM 445
VE P+ + H NA+E K+ DG + I C C + N RLD
Sbjct: 363 VEVPAYV-TFHFINAYEEDKNGDGKATVIIADC-CEH------NADTRILDMLRLD---- 410
Query: 446 NLKESE-YQLLP--HLVQVSISLDVDGNCQKCTVEPLNQWKKSSDFPIINPTYSGQKTTC 502
L+ S + +LP + + I LD + T + ++ D INP Y GQK
Sbjct: 411 TLRSSHGHDVLPDARIGRFRIPLDGSKYGKLETAVEAEKHGRAMDMCSINPLYLGQKYRY 470
Query: 503 IYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPK--GVEEDDGY 560
+YA G +R +FP + + K++++ K V+ W EP FVP+ EDDG
Sbjct: 471 VYAC---GAQRPC-NFP-NALSKVDIVEKKVKNWHEHGM-IPSEPFFVPRPGATHEDDGV 524
Query: 561 LLVIEYAVSIQR--CYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHGFW 609
++ I VS + + I+L+ E +AR + P L P G HG W
Sbjct: 525 VISI---VSEENGGSFAILLDGSSFEE----IARAKFPYGL--PYGLHGCW 566
Score = 130 (50.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 51/188 (27%), Positives = 94/188 (50%)
Query: 90 VDGAIPSDFPSGTYYLTGPGLFT-DDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVK 148
V G IP+ + +GTY GPGL+ DH H DG+ L +FDG G + + ++
Sbjct: 97 VQGKIPT-WLNGTYLRNGPGLWNIGDHDFR-HLFDGYSTLVKLQFDG--GRIFAAHRLLE 152
Query: 149 TDAQ--VEEHD-------PQTDTWRFTHRGPFSVLKGGKKFGNTKVMKNVANTSVLKWG- 198
+DA ++H+ +T ++ PFS + + + + + + ANT V+K G
Sbjct: 153 SDAYKAAKKHNRLCYREFSETPKSVIINKNPFSGIGEIVRLFSGESLTDNANTGVIKLGD 212
Query: 199 GKLLCLWEGGD-PYEIESGTLDTIGQLQMMDG-GDSLGKNSK------DLWDVAAEMLKP 250
G+++CL E ++ TL+TIG+ + D D + +++ ++W + +++KP
Sbjct: 213 GRVMCLTETQKGSILVDHETLETIGKFEYDDVLSDHMIQSAHPIVTETEMWTLIPDLVKP 272
Query: 251 ILYGVFKM 258
Y V +M
Sbjct: 273 G-YRVVRM 279
>RGD|621396 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] [GO:0042574 "retinal
metabolic process" evidence=IMP] [GO:0044297 "cell body"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IMP]
RGD:621396 GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 GO:GO:0042574 GO:GO:0044297
GO:GO:0001654 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF035673 IPI:IPI00196676
RefSeq:NP_446014.1 UniGene:Rn.76724 ProteinModelPortal:O70276
GeneID:89826 KEGG:rno:89826 NextBio:617740 Genevestigator:O70276
Uniprot:O70276
Length = 533
Score = 151 (58.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 49/131 (37%), Positives = 66/131 (50%)
Query: 483 KKSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRR 542
+++ +FP IN G K YA LG L HF D + KLNV TK + W
Sbjct: 413 RQAFEFPQINYQKCGGKPYT-YAY-GLG----LNHFVPDKLCKLNVKTKEIWMWQEPDS- 465
Query: 543 FIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRH 598
+ EPIFV P +EEDDG +L V+ + YL++LN K + E +AR EV
Sbjct: 466 YPSEPIFVSQPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSE----IARAEV--E 519
Query: 599 LNFPLGFHGFW 609
N P+ FHG +
Sbjct: 520 TNIPVTFHGLF 530
Score = 108 (43.1 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ LF + E + P+T H V G IP + +G+ GPGLF H DG L
Sbjct: 12 YKKLFETVE-ELSTPLTAH-VTGRIPL-WLTGSLLRCGPGLFEVGSEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
F+F G V Y ++++TDA V
Sbjct: 69 KFDFK--EGHVTYYRRFIRTDAYV 90
>WB|WBGene00018755 [details] [associations]
symbol:bcmo-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:FO080905
RefSeq:NP_494694.2 ProteinModelPortal:Q9TXT9 PaxDb:Q9TXT9
EnsemblMetazoa:F53C3.12 GeneID:173733 KEGG:cel:CELE_F53C3.12
CTD:173733 WormBase:F53C3.12 HOGENOM:HOG000153586 InParanoid:Q9TXT9
OMA:MEAQRIV NextBio:880851 Uniprot:Q9TXT9
Length = 530
Score = 143 (55.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 44/140 (31%), Positives = 69/140 (49%)
Query: 483 KKSSDFPIINPTYSGQKTTC-----IYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWS 537
K+ D + P Y +K +Y ++ LG +++ P +VK ++ + W
Sbjct: 399 KRVCDISMEFPRYHWEKINMKPYNYVYGSSVLGAQKS-ETLP--GIVKADLENGDHKVWR 455
Query: 538 -VGTRRFIGEPIFVP--KGVEEDDGYLLVIEYAVSI-QRCYLIILNPKKIGEGDALVARL 593
++ GEPIFVP +GV EDDG L+V +S QR +++IL K + E +AR
Sbjct: 456 RENDKQICGEPIFVPNPEGVREDDGILIVPVMTISDGQRPFVLILEAKNLTE----IARY 511
Query: 594 EVPRHLNFPLGFHGFWDNNT 613
+P PLGFH F+ T
Sbjct: 512 TIPE-ARIPLGFHAFYQGRT 530
Score = 88 (36.0 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 92 GAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVKTD 150
G++PS + GT GPG+F H DG G+++ + F+ G++ Y A+Y++++
Sbjct: 26 GSVPS-YLKGTMLRNGPGMFEIGDTKYQHWFDGMGFIQRYHFED--GKMYYSARYLESE 81
Score = 50 (22.7 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 436 QSGRLDPSIM-NLKESEYQ----LLPHLVQVSISLDVDGNCQKCT--VEPLNQWKK 484
Q+G D ++ N+K +Q LP+L +V I L + Q ++PL W K
Sbjct: 328 QAGNFDALLIENMKTGNFQNDALFLPYLTRVIIPLSIPDGAQPGDDLLKPLG-WAK 382
>ZFIN|ZDB-GENE-010508-1 [details] [associations]
symbol:bcmo1a "beta-carotene 15,15'-monooxygenase 1a"
species:7955 "Danio rerio" [GO:0008198 "ferrous iron binding"
evidence=NAS] [GO:0003834 "beta-carotene 15,15'-monooxygenase
activity" evidence=IDA] [GO:0030902 "hindbrain development"
evidence=IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0004497 "monooxygenase
activity" evidence=IEA] [GO:0001754 "eye photoreceptor cell
differentiation" evidence=IMP] ZFIN:ZDB-GENE-010508-1 GO:GO:0008198
GO:GO:0030902 HOVERGEN:HBG050679 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 BRENDA:1.14.99.36 GO:GO:0001754
EMBL:AJ290390 IPI:IPI00483690 UniGene:Dr.12383 STRING:Q90WH4
ArrayExpress:Q90WH4 Uniprot:Q90WH4
Length = 516
Score = 141 (54.7 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 81/308 (26%), Positives = 129/308 (41%)
Query: 319 HDWAFTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNPSKPTSPVYLLPRFPNKSV 378
H + TD ++I +KLD+L TA S + +P T ++L+ R K V
Sbjct: 234 HSFGMTDNYFIFIEQPLKLDILKMATAYLRRVSWASCMKFHPEDSTL-IHLIDRNTKKEV 292
Query: 379 GVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCS--YEWFNFQNL---FGY 433
+ + +A M + H NAFE D DG+ + A + YE+F L G
Sbjct: 293 ATKFY---TDA---MTVYHQVNAFE--D-DGHVVFDVIAYDDNNLYEFFYLNKLKETMGA 343
Query: 434 N--WQSGRLDPSIMNLK---ESEYQLLP-HLVQVSISLDVDGNCQKCTVEPLNQWKKSSD 487
+ + + L E+ L+ S + DG C E L + +
Sbjct: 344 TNLYCKPKFTRFVFPLSDQGETGEDLVKLKYTTASAVKEKDGKIM-CQGEVLCE---GVE 399
Query: 488 FPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDT-VVKLNVLTKSVQTWSVGTRRFIGE 546
P IN ++G+K Y + P T +VK + TK W G F E
Sbjct: 400 LPRINYNFNGKKYRYSYMC-------CVDESPVATRIVKFDADTKQQIEWK-GDDGFASE 451
Query: 547 PIFVPK--GVEEDDGYLL-VIEYAVSIQRCYLIILNPKKIGEGDALVAR--LEVPRHLNF 601
P+F+P+ V+EDDG +L VI +Q +L++L+ K E +AR L+V H++
Sbjct: 452 PVFIPRPGAVDEDDGVVLTVIINNKPLQGGFLLVLDAKSFKE----IARACLDVEIHMDM 507
Query: 602 PLGFHGFW 609
HG++
Sbjct: 508 ----HGYF 511
Score = 94 (38.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 71 QFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRA 130
Q+ + + E PI V G+IP ++ GT GPG+F+ + H DG L +
Sbjct: 2 QYDYGKNKEEHPEPIKTE-VKGSIP-EWVQGTLIRNGPGMFSVGETTYNHWFDGMALLHS 59
Query: 131 FEFDGVTGEVKYMAKYVKTD 150
F + GEV Y ++Y++ D
Sbjct: 60 FAIN--KGEVTYRSRYLRGD 77
>TAIR|locus:2134796 [details] [associations]
symbol:NCED4 "nine-cis-epoxycarotenoid dioxygenase 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
EMBL:AL021687 EMBL:AL161550 GO:GO:0016702 GO:GO:0010287
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 EMBL:AY136353 EMBL:BT008785 EMBL:AY056789
EMBL:AK227175 IPI:IPI00536835 PIR:T04438 RefSeq:NP_193652.1
UniGene:At.1927 UniGene:At.67316 ProteinModelPortal:O49675
SMR:O49675 IntAct:O49675 STRING:O49675 PaxDb:O49675 PRIDE:O49675
EnsemblPlants:AT4G19170.1 GeneID:827655 KEGG:ath:AT4G19170
TAIR:At4g19170 InParanoid:O49675 KO:K09840 OMA:HGAWVPR
PhylomeDB:O49675 ProtClustDB:CLSN2685496 Genevestigator:O49675
Uniprot:O49675
Length = 595
Score = 122 (48.0 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 50/180 (27%), Positives = 87/180 (48%)
Query: 442 PSIMNLKES-EYQLLPHLVQVSISLD-VDGNCQKCTVEPLNQWKKSSDFPIINPTYSGQK 499
P+IM+++ + E L H + + +D V G ++ P++ ++ DF +INP + G+
Sbjct: 422 PNIMSIEHTLERMDLVHALVEKVKIDLVTGIVRR---HPISA--RNLDFAVINPAFLGRC 476
Query: 500 TTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFI-----GEPIFVPKG- 553
+ +YAA +G P VVKL+V +V R + GEP FV +
Sbjct: 477 SRYVYAA--IGD----PMPKISGVVKLDVSKGDRDDCTVARRMYGSGCYGGEPFFVARDP 530
Query: 554 ----VEEDDGYLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHGFW 609
EEDDGY++ + ++++ K E + +VA + +PR + P GFHG +
Sbjct: 531 GNPEAEEDDGYVVTYVHDEVTGESKFLVMDAKS-PELE-IVAAVRLPRRV--PYGFHGLF 586
Score = 95 (38.5 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 51/202 (25%), Positives = 79/202 (39%)
Query: 84 PITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYM 143
P ++ G +P +G Y GP G H DG G L A + G+
Sbjct: 124 PTDCEIIHGTLPLSL-NGAYIRNGPNPQFLPRGP-YHLFDGDGMLHAIKIHN--GKATLC 179
Query: 144 AKYVKT-DAQVEEHD--PQTDTWRFTHRG-PFSVLKGGKKF-----GNTKVMKNV--ANT 192
++YVKT VE+ P G SV +G G + + ANT
Sbjct: 180 SRYVKTYKYNVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANT 239
Query: 193 SVLKWGGKLLCLWEGGDPYEI---ESGTLDTIGQLQMMDGGDSLGKNSKDLWDVAAEMLK 249
S+ + +L L E PY + ESG ++TIG+ DG ++ + D
Sbjct: 240 SLAFFSNRLFALGESDLPYAVRLTESGDIETIGRYDF-DGKLAMSMTAHPKTDPITGETF 298
Query: 250 PILYGVFKMPPKRLLSHYKLDA 271
YG +PP L++++ D+
Sbjct: 299 AFRYG--PVPP--FLTYFRFDS 316
Score = 63 (27.2 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 294 TFYEFDS-NFKLLNKQEFNILDHLMIHDWAFTDTHYILFANRVKLDVLGSMT--AVSGLS 350
T++ FDS K + F++ +HD+A T H I FA ++L + +M + G S
Sbjct: 310 TYFRFDSAGKKQRDVPIFSMTSPSFLHDFAITKRHAI-FAE-IQLGMRMNMLDLVLEGGS 367
Query: 351 PMISALSVNPSKPTSPVYLLPRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGN 410
P+ + K T + ++P++ ++ W E P ++H NA++ +D DGN
Sbjct: 368 PV----GTDNGK-TPRLGVIPKYAGDESEMK-W---FEVPG-FNIIHAINAWD-ED-DGN 415
Query: 411 TEIQI 415
+ + I
Sbjct: 416 SVVLI 420
>ZFIN|ZDB-GENE-081104-505 [details] [associations]
symbol:rpe65c "retinal pigment epithelium-specific
protein 65c" species:7955 "Danio rerio" [GO:0008152 "metabolic
process" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0050251 "retinol isomerase
activity" evidence=IDA] ZFIN:ZDB-GENE-081104-505
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:CR759968 Ensembl:ENSDART00000038725
Uniprot:K9J6Q0
Length = 532
Score = 133 (51.9 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 83/318 (26%), Positives = 136/318 (42%)
Query: 318 IHDWAFTDTHYILFANRVKLDVLGSMTA--VSGLSPMISALSVNPSKPTSPVYLLPRFPN 375
+H + T+ H++ VK+++L +T+ + G S + N T +L + P
Sbjct: 240 VHSFGITENHFVFVETPVKINLLKFLTSWSIRG-SNYMDCFESNDKMGTW-FHLAAKNPG 297
Query: 376 KSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCS-YEW-FNFQNLFGY 433
K + D + A + + H N FE + I + C+ +E+ +N+ L
Sbjct: 298 KYI---DHKFRTSAFN---IFHHINCFEDQGF-----IVVDLCTWKGHEFVYNYLYLANL 346
Query: 434 --NWQSGRLDPSIMNLKESEYQLLP---H-------LVQVSISLDVDGNCQKCTV--EP- 478
NW+ + E +LP H LV + + C TV EP
Sbjct: 347 RQNWEEVKKAALRAPQPEVRRYVLPLDIHREEQGKNLVSLPYTTATAVMCSDGTVWLEPE 406
Query: 479 --LNQWKKSSDFPIINPT-YSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQT 535
+ +++ +FP IN + ++G+ T Y LG L HF D + KLNV +K
Sbjct: 407 VLFSGPRQAFEFPQINYSKFNGKDYTFAYG---LG----LNHFVPDRICKLNVKSKETWI 459
Query: 536 WSVGTRRFIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVA 591
W + EP+FV P +EDDG LL V++ VS + +L+IL + E +A
Sbjct: 460 WQEPDA-YPSEPLFVQSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTE----IA 514
Query: 592 RLEVPRHLNFPLGFHGFW 609
R EV + PL HG +
Sbjct: 515 RAEVD--VLIPLTLHGIY 530
Score = 102 (41.0 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ +F S E PI H V G IP+ + SG+ GPGLF H DG L
Sbjct: 12 YKKVFESCE-ELAEPIPAH-VSGEIPA-WLSGSLLRMGPGLFEVGDEPFYHLFDGQALLH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
+FD G V Y ++++TDA V
Sbjct: 69 --KFDLKDGRVTYHRRFIRTDAYV 90
>ZFIN|ZDB-GENE-050410-16 [details] [associations]
symbol:rpe65b "retinal pigment epithelium-specific
protein 65b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
ZFIN:ZDB-GENE-050410-16 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0016787 GeneTree:ENSGT00500000044783 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AY646887
EMBL:CR759968 EMBL:BC133985 EMBL:BC155753 IPI:IPI00851384
RefSeq:NP_001082902.2 UniGene:Dr.79444 ProteinModelPortal:A9C3R9
PRIDE:A9C3R9 DNASU:100002865 Ensembl:ENSDART00000076542
GeneID:100002865 KEGG:dre:100002865 CTD:100002865
BioCyc:MetaCyc:MONOMER-16789 NextBio:20785619 Bgee:A9C3R9
Uniprot:A9C3R9
Length = 532
Score = 132 (51.5 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 83/318 (26%), Positives = 136/318 (42%)
Query: 318 IHDWAFTDTHYILFANRVKLDVLGSMTA--VSGLSPMISALSVNPSKPTSPVYLLPRFPN 375
+H + T+ H++ VK+++L +T+ + G S + N T +L + P
Sbjct: 240 VHSFGMTENHFVFVETPVKINLLKFLTSWSIRG-SNYMDCFESNDRMGTW-FHLAAKNPG 297
Query: 376 KSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCS-YEW-FNFQNLFGY 433
K + D + A + + H N FE + I + C+ +E+ +N+ L
Sbjct: 298 KYI---DHKFRTSAFN---IFHHINCFEDQGF-----IVVDLCTWKGHEFVYNYLYLANL 346
Query: 434 --NWQSGRLDPSIMNLKESEYQLLP---H-------LVQVSISLDVDGNCQKCTV--EP- 478
NW+ + E +LP H LV + + C TV EP
Sbjct: 347 RQNWEEVKKAALRAPQPEVRRYVLPLDIHREEQGKNLVSLPYTTATAVMCSDGTVWLEPE 406
Query: 479 --LNQWKKSSDFPIINPT-YSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQT 535
+ +++ +FP IN + ++G+ T Y LG L HF D + KLNV +K
Sbjct: 407 VLFSGPRQAFEFPQINYSKFNGKDYTFAYG---LG----LNHFVPDRICKLNVKSKETWI 459
Query: 536 WSVGTRRFIGEPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVA 591
W + EP+FV P +EDDG LL V++ VS + +L+IL + E +A
Sbjct: 460 WQEPDA-YPSEPLFVQSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTE----IA 514
Query: 592 RLEVPRHLNFPLGFHGFW 609
R EV + PL HG +
Sbjct: 515 RAEVD--VLIPLTLHGIY 530
Score = 101 (40.6 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 31/84 (36%), Positives = 41/84 (48%)
Query: 70 YQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLR 129
Y+ +F S E PI H V G IP+ + SG+ GPGLF H DG +
Sbjct: 12 YKKVFESCE-ELAEPIPAH-VSGKIPA-WLSGSLLRMGPGLFEIGDEPFNHLFDGQALIH 68
Query: 130 AFEFDGVTGEVKYMAKYVKTDAQV 153
+FD G V Y K+++TDA V
Sbjct: 69 --KFDLKDGRVTYHRKFIRTDAYV 90
>WB|WBGene00012914 [details] [associations]
symbol:bcmo-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AL110485
OMA:TSMEFPR HOGENOM:HOG000153586 RefSeq:NP_496729.2
UniGene:Cel.14051 ProteinModelPortal:Q9U2E4 SMR:Q9U2E4
DIP:DIP-26226N IntAct:Q9U2E4 MINT:MINT-1067701 PaxDb:Q9U2E4
EnsemblMetazoa:Y46G5A.24 GeneID:189959 KEGG:cel:CELE_Y46G5A.24
UCSC:Y46G5A.24 CTD:189959 WormBase:Y46G5A.24 InParanoid:Q9U2E4
NextBio:944184 Uniprot:Q9U2E4
Length = 529
Score = 125 (49.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 35/91 (38%), Positives = 51/91 (56%)
Query: 523 VVKLNVLTKSVQTWS-VGTRRFIGEPIFVP--KGVEEDDGYLLV-IEYAVSIQRCYLIIL 578
VVK ++ + W+ + GEPIFVP +G+EEDDG L+V I + Q +++IL
Sbjct: 440 VVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDDGILIVPIMSSSEKQVPFVLIL 499
Query: 579 NPKKIGEGDALVARLEVPRHLNFPLGFHGFW 609
+ K + E AR E+P PLGFH F+
Sbjct: 500 DAKTLEE----TARFEIPE-ARIPLGFHAFY 525
Score = 105 (42.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 92 GAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVKTDA 151
G++PS + +GT GPG+FT H DG G+++ + F+ G++ Y A+Y++++A
Sbjct: 26 GSVPS-YLTGTMLRNGPGMFTVGEEEYKHWFDGLGFMQRYHFED--GKMFYSARYLESEA 82
Query: 152 QVEEHDPQ---TDTW-RFTHRGPFSVL--KGGKKFGNTKVMKNVANTSVLKWGGKLLCLW 205
+ + Q T+ + P + K +F N + +N + G L
Sbjct: 83 YTKTVEAQRIVAGTFGTLSFPDPCKTIFSKYFSEFMNHSEKHDNSNVAFTPVGDSLYACT 142
Query: 206 EGGDPYEIESGTLDTI 221
E Y ++ TL T+
Sbjct: 143 ETPHMYRVDLDTLKTL 158
>TAIR|locus:2202492 [details] [associations]
symbol:NCED5 "nine-cis-epoxycarotenoid dioxygenase 5"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009688
"abscisic acid biosynthetic process" evidence=IMP;TAS] [GO:0045549
"9-cis-epoxycarotenoid dioxygenase activity" evidence=TAS]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010162 "seed dormancy process" evidence=IGI] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0009414 GO:GO:0009688
GO:GO:0009579 GO:GO:0009535 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162 HOGENOM:HOG000254836
GO:GO:0045549 KO:K09840 EMBL:AC074176 ProtClustDB:PLN02258
EMBL:AK226774 IPI:IPI00530821 PIR:A86425 RefSeq:NP_174302.1
UniGene:At.51834 ProteinModelPortal:Q9C6Z1 SMR:Q9C6Z1 IntAct:Q9C6Z1
STRING:Q9C6Z1 EnsemblPlants:AT1G30100.1 GeneID:839889
KEGG:ath:AT1G30100 TAIR:At1g30100 InParanoid:Q9C6Z1 OMA:PTYVLHF
PhylomeDB:Q9C6Z1 Genevestigator:Q9C6Z1 Uniprot:Q9C6Z1
Length = 589
Score = 120 (47.3 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 47/173 (27%), Positives = 81/173 (46%)
Query: 443 SIMNLKESEYQLLPHLVQVSISLDVDGNCQKCTVEPLNQWKKSSDFPIINPTYSGQKTTC 502
SI N E + QL L ++ ++L G + T+ P + + + ++N G+KT
Sbjct: 426 SIFN--ECDEQLNSVLSEIRLNLKT-GKSTRRTIIP-GSVQMNLEAGMVNRNLLGRKTRY 481
Query: 503 IYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPKGVE---EDDG 559
Y A A P K+++ T V+ G +++ GEP F+P+G+E EDDG
Sbjct: 482 AYLAI------AEPWPKVSGFAKVDLSTGEVKNHFYGGKKYGGEPFFLPRGLESDGEDDG 535
Query: 560 YLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHGFWDNN 612
Y++ + L I+N + L A +++P + P GFHG + N+
Sbjct: 536 YIMSFVHDEESWESELHIVNAVTL----ELEATVKLPSRV--PYGFHGTFVNS 582
Score = 111 (44.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 63/244 (25%), Positives = 103/244 (42%)
Query: 90 VDGAIPSDFPSGTYYLTGPG-LFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVK 148
VDG IP D G Y G LF G H DG G + A + G+ Y ++ +
Sbjct: 131 VDGKIP-DCIDGVYLRNGANPLFEPVSGH--HLFDGDGMVHAVKI--TNGDASYSCRFTE 185
Query: 149 TDAQVEEHD------PQTDTWRFTHRGPFSVLKGGKK--FG--NTKVMKNVANTSVLKWG 198
T+ V+E P+ H G ++ + FG N K VAN ++ +
Sbjct: 186 TERLVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFH 245
Query: 199 GKLLCLWEGGDPYEI---ESGTLDTIGQLQMMDGGDSLGKNSKDLWDVAAEMLKPILYGV 255
+LL + E PY++ ++G L+TIG+ DG S + D + L + Y V
Sbjct: 246 DRLLAMSEDDLPYQVRVTDNGDLETIGRFDF-DGQLSSAMIAHPKIDPVTKELFALSYDV 304
Query: 256 FKMPPKRLLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTF-YEF--DSNFKLLNKQE--F 310
K P L ++K +P + D+ +P ++ T ++F NF ++ Q+ F
Sbjct: 305 VKKP---YLKYFKF-SPEGE------KSPDVEIPLASPTMMHDFAITENFVVIPDQQVVF 354
Query: 311 NILD 314
+ D
Sbjct: 355 KLSD 358
Score = 63 (27.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/146 (21%), Positives = 65/146 (44%)
Query: 263 LLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTFYEFDSNFKLLNKQEFNILDHLMIHDWA 322
+++H K+D L +S + ++ + +++F + E + M+HD+A
Sbjct: 284 MIAHPKIDPVTKELFALSYD----VVKKPYLKYFKFSPEGEKSPDVEIPLASPTMMHDFA 339
Query: 323 FTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNPSKPTSPVYLLPRFPNKSVGVRD 382
T+ ++++ ++ + L M G SP+ + K S +LPR K
Sbjct: 340 ITE-NFVVIPDQQVVFKLSDMFL--GKSPV----KYDGEK-ISRFGILPRNA-KDASEMV 390
Query: 383 WRVPVEAPSQMWLLHVGNAFELKDVD 408
W VE+P + + H+ NA+E + D
Sbjct: 391 W---VESP-ETFCFHLWNAWESPETD 412
>MGI|MGI:1926923 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase"
species:10090 "Mus musculus" [GO:0001523 "retinoid metabolic
process" evidence=ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=ISO;ISS;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO;ISS;IDA] UniPathway:UPA00912 MGI:MGI:1926923
GO:GO:0046872 GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630
eggNOG:COG3670 GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AJ278064 EMBL:AF271298 EMBL:AF294899 EMBL:AY114302
EMBL:AY114294 EMBL:AY114295 EMBL:AY114296 EMBL:AY114297
EMBL:AY114298 EMBL:AY114299 EMBL:AY114300 EMBL:AY114301
EMBL:AK054171 IPI:IPI00122199 RefSeq:NP_067461.2 UniGene:Mm.174133
ProteinModelPortal:Q9JJS6 SMR:Q9JJS6 STRING:Q9JJS6
PhosphoSite:Q9JJS6 PRIDE:Q9JJS6 Ensembl:ENSMUST00000034308
GeneID:63857 KEGG:mmu:63857 InParanoid:Q9JJS6 BRENDA:1.14.99.36
NextBio:319783 Bgee:Q9JJS6 CleanEx:MM_BCMO1 Genevestigator:Q9JJS6
GermOnline:ENSMUSG00000031845 Uniprot:Q9JJS6
Length = 566
Score = 134 (52.2 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 82/322 (25%), Positives = 143/322 (44%)
Query: 311 NILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTA-VSGLSPMISALSVNPSKPTSPVYL 369
++L H + T+ + + KLD+L TA + G+S S +S + T +++
Sbjct: 229 SLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVS-WASCMSFDREDKTY-IHI 286
Query: 370 LPRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCSYEWFNFQN 429
+ + K V + + P M + H NA+E +D ++ + S Y+ F N
Sbjct: 287 IDQRTRKPVPTKFYTDP------MVVFHHVNAYE-EDGCVLFDVIAYEDSSLYQLFYLAN 339
Query: 430 LFGYNWQSGRLD--PSIMNLK-----ESEYQLLPHLVQVSISL-----DVDGNCQKCTVE 477
L + RL P++ + + ++ +LV+VS + + DG+ C E
Sbjct: 340 LNKDFEEKSRLTSVPTLRRFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDGHVY-CQPE 398
Query: 478 PLNQWKKSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDT-VVKLNVLTKSVQTW 536
L + + P IN Y+G+ I+AA + P T ++K ++LTKS W
Sbjct: 399 VLYE---GLELPRINYAYNGKPYRYIFAAE-------VQWSPVPTKILKYDILTKSSLKW 448
Query: 537 SVGTRRFIGEPIFVPK-GV-EEDDGYLLVIEYAVSIQRC-YLIILNPKKIGEGDALVARL 593
S + + EP+FVP G +EDDG +L + Q+ +L+IL+ K E +AR
Sbjct: 449 SEESC-WPAEPLFVPTPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTE----LARA 503
Query: 594 EVPRHLNFPLGFHG-FWDNNTW 614
V ++ L HG F + W
Sbjct: 504 SVDADMHLDL--HGLFIPDADW 523
Score = 94 (38.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 71 QFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRA 130
+ +F + E P+ V G+IP+ + GT GPG+ T H DG L +
Sbjct: 2 EIIFGQNKKEQLEPVQAK-VTGSIPA-WLQGTLLRNGPGMHTVGESKYNHWFDGLALLHS 59
Query: 131 FEFDGVTGEVKYMAKYVKTDAQV 153
F GEV Y +KY+++D +
Sbjct: 60 FSIRD--GEVFYRSKYLQSDTYI 80
>ZFIN|ZDB-GENE-060421-7448 [details] [associations]
symbol:bco2b "beta-carotene oxygenase 2b"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-060421-7448 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 KO:K10252 OrthoDB:EOG45B1FD EMBL:BX572648
EMBL:BC115259 IPI:IPI00758725 RefSeq:NP_001035402.1
UniGene:Dr.82050 Ensembl:ENSDART00000061139 GeneID:678554
KEGG:dre:678554 CTD:678554 InParanoid:Q1RLW1 OMA:LWHIGDY
NextBio:20902398 Uniprot:Q1RLW1
Length = 555
Score = 128 (50.1 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 32/94 (34%), Positives = 51/94 (54%)
Query: 517 HFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFV--PKGVEEDDGYLLVIEYAVSIQRC- 573
H D+++K+++ K ++ W F EP+FV P VEEDDG +L + + +
Sbjct: 465 HLVGDSLIKMDLQGKQIKVWK-HAGMFPSEPVFVSSPGAVEEDDGVILSVVITPNQDKST 523
Query: 574 YLIILNPKKIGEGDALVARLEVPRHLNFPLGFHG 607
+L++L+ K E + R EVP+ N P GFHG
Sbjct: 524 FLLVLDAKTFEE----LGRAEVPK--NIPYGFHG 551
Score = 100 (40.3 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 27/85 (31%), Positives = 41/85 (48%)
Query: 75 VSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFD 134
+ ET PIT + G +PS + G + GPG F S H DG L F +
Sbjct: 39 ICSADETPEPITT-TITGNVPS-WIKGNFLRNGPGKFEIGRSSFNHWFDGMALLHQFHIE 96
Query: 135 GVTGEVKYMAKYVKTDAQVE--EHD 157
G+V YM++++ +D+ E EH+
Sbjct: 97 D--GKVTYMSRFLNSDSYKENLEHN 119
Score = 40 (19.1 bits), Expect = 3.6e-10, Sum P(3) = 3.6e-10
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 319 HDWAFTDTHYILFANRVKLDVLGSMT 344
H +A ++ + + +K+D+L +T
Sbjct: 263 HSFAMSENYVVFIEQPIKMDLLKIVT 288
>TAIR|locus:2087418 [details] [associations]
symbol:CCD1 "carotenoid cleavage dioxygenase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016121 "carotene catabolic process" evidence=IMP] [GO:0016124
"xanthophyll catabolic process" evidence=IMP] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0044242 "cellular
lipid catabolic process" evidence=RCA] GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0046872 EMBL:AL163818 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121
EMBL:AJ005813 EMBL:BT000436 EMBL:BT002102 IPI:IPI00517969
PIR:T49193 PIR:T51734 RefSeq:NP_191911.1 UniGene:At.22615
UniGene:At.43820 ProteinModelPortal:O65572 SMR:O65572 STRING:O65572
PaxDb:O65572 PRIDE:O65572 EnsemblPlants:AT3G63520.1 GeneID:825527
KEGG:ath:AT3G63520 TAIR:At3g63520 HOGENOM:HOG000254836
InParanoid:O65572 KO:K11159 OMA:GVMMHDF PhylomeDB:O65572
ProtClustDB:PLN02491 Genevestigator:O65572 GO:GO:0045549
GO:GO:0016124 Uniprot:O65572
Length = 538
Score = 109 (43.4 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 33/131 (25%), Positives = 59/131 (45%)
Query: 487 DFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQT-------WSVG 539
DFP IN Y+G+K +Y + FD + + ++ + +G
Sbjct: 400 DFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRMLEVGGNIKGIYDLG 459
Query: 540 TRRFIGEPIFVPKGV-EEDDGYLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRH 598
R+ E I+VP+ EEDDGYL+ + + + + +++ K + VA +E+P
Sbjct: 460 EGRYGSEAIYVPRETAEEDDGYLIFFVHDENTGKSCVTVIDAKTMSAEP--VAVVELPHR 517
Query: 599 LNFPLGFHGFW 609
+ P GFH +
Sbjct: 518 V--PYGFHALF 526
Score = 97 (39.2 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 47/161 (29%), Positives = 67/161 (41%)
Query: 74 FVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEF 133
F R ET P+ V G +P +G + GP D H DG G +
Sbjct: 52 FAPIRDETP-PVKDLPVHGFLPECL-NGEFVRVGPNPKFDAVAG-YHWFDGDGMIHGVRI 108
Query: 134 DGVTGEVKYMAKYVKTDA-QVEEHDPQTDTWRFTH-RGPFSVLKGGKKFGNTK--VMKNV 189
G+ Y+++YVKT + EE + +G F +L + TK ++ N
Sbjct: 109 KD--GKATYVSRYVKTSRLKQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNT 166
Query: 190 -----ANTSVLKWGGKLLCLWEGGDPYEI---ESGTLDTIG 222
ANT+++ GKLL L E PY I E G L T+G
Sbjct: 167 YGNGTANTALVYHHGKLLALQEADKPYVIKVLEDGDLQTLG 207
Score = 61 (26.5 bits), Expect = 5.7e-10, Sum P(3) = 5.7e-10
Identities = 25/95 (26%), Positives = 45/95 (47%)
Query: 312 ILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNPSKPTSPVYLLP 371
I + +M+HD+A T+T Y +F +D+ + S +P+K +LP
Sbjct: 263 ISEPIMMHDFAITET-YAIF-----MDLPMHFRPKEMVKEKKMIYSFDPTKKAR-FGVLP 315
Query: 372 RFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKD 406
R+ + +R W E P+ ++ H NA+E +D
Sbjct: 316 RYAKDELMIR-W---FELPN-CFIFHNANAWEEED 345
>TAIR|locus:2091652 [details] [associations]
symbol:NCED3 "nine-cis-epoxycarotenoid dioxygenase 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA;IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009414 GO:GO:0009688 GO:GO:0009535 GO:GO:0042538
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 OMA:HTLNAYD
EMBL:AB028617 ProtClustDB:PLN02258 EMBL:AB026549 EMBL:AY056255
IPI:IPI00528622 RefSeq:NP_188062.1 UniGene:At.26346
ProteinModelPortal:Q9LRR7 SMR:Q9LRR7 STRING:Q9LRR7 PaxDb:Q9LRR7
EnsemblPlants:AT3G14440.1 GeneID:820667 KEGG:ath:AT3G14440
TAIR:At3g14440 InParanoid:Q9LRR7 PhylomeDB:Q9LRR7
BioCyc:ARA:AT3G14440-MONOMER BioCyc:MetaCyc:AT3G14440-MONOMER
Genevestigator:Q9LRR7 Uniprot:Q9LRR7
Length = 599
Score = 119 (46.9 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 443 SIMNLKESEYQLLPHLVQVSISLDVDGNCQKCTVEPLNQWKKSSDFPIINPTYSGQKTTC 502
SI N ES+ L L ++ ++L + ++ + +Q + + + ++N G+KT
Sbjct: 436 SIFN--ESDENLKSVLSEIRLNLKTGESTRRPIISNEDQ-QVNLEAGMVNRNMLGRKTKF 492
Query: 503 IYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVP-KGVEEDDGYL 561
Y A A P K+++ T V+ G R+ GEP+F+P +G EED+GY+
Sbjct: 493 AYLAL------AEPWPKVSGFAKVDLTTGEVKKHLYGDNRYGGEPLFLPGEGGEEDEGYI 546
Query: 562 LVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHG 607
L + + L I+N + E +A V ++P + P GFHG
Sbjct: 547 LCFVHDEKTWKSELQIVNAVSL-EVEATV---KLPSRV--PYGFHG 586
Score = 80 (33.2 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 40/161 (24%), Positives = 67/161 (41%)
Query: 84 PITLHL-VDGAIPSDFPSGTYYLTGPG-LFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVK 141
P+ +L V G +P D G Y G L G H DG G + A +F+ G
Sbjct: 134 PVRRNLPVVGKLP-DSIKGVYVRNGANPLHEPVTGH--HFFDGDGMVHAVKFEH--GSAS 188
Query: 142 YMAKYVKTDAQVEEHD------PQTDTWRFTHRGPFSVL----KGGKKFGNTKVMKNVAN 191
Y ++ +T+ V+E P+ H G ++ + + VAN
Sbjct: 189 YACRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVAN 248
Query: 192 TSVLKWGGKLLCLWEGGDPYEIE---SGTLDTIGQLQMMDG 229
++ + G+LL + E PY+++ +G L T+G+ DG
Sbjct: 249 AGLVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDF-DG 288
Score = 61 (26.5 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 28/146 (19%), Positives = 68/146 (46%)
Query: 263 LLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTFYEFDSNFKLLNKQEFNILDHLMIHDWA 322
+++H K+D L +S + ++ + ++ F + E + M+HD+A
Sbjct: 294 MIAHPKVDPESGELFALSYD----VVSKPYLKYFRFSPDGTKSPDVEIQLDQPTMMHDFA 349
Query: 323 FTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNPSKPTSPVYLLPRFPNKSVGVRD 382
T+ ++++ ++ + L M + G SP++ + +K + +L ++ S ++
Sbjct: 350 ITE-NFVVVPDQQVVFKLPEM--IRGGSPVV----YDKNK-VARFGILDKYAEDSSNIK- 400
Query: 383 WRVPVEAPSQMWLLHVGNAFELKDVD 408
W ++AP + H+ NA+E + D
Sbjct: 401 W---IDAPD-CFCFHLWNAWEEPETD 422
>ASPGD|ASPL0000067272 [details] [associations]
symbol:AN7062 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR011047 SUPFAM:SSF50998 EMBL:BN001304
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 EMBL:AACD01000118 RefSeq:XP_664666.1
ProteinModelPortal:Q5AXB8 EnsemblFungi:CADANIAT00000409
GeneID:2869943 KEGG:ani:AN7062.2 OMA:FQEPIFV OrthoDB:EOG4GTPN5
Uniprot:Q5AXB8
Length = 555
Score = 125 (49.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 42/136 (30%), Positives = 65/136 (47%)
Query: 90 VDGAIPSDFPSGTYYLTGPG-LFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVK 148
+ G IP+D GT++ P F + S +H +G G + A T K +YV+
Sbjct: 53 ITGQIPADI-DGTFFRVQPDHRFPPIYESDIH-FNGDGNVTAIRITNSTAHFKQ--RYVR 108
Query: 149 TDAQVEEHDPQTDTWRF-THRGPFSVLKGGKKFGNTKVMKNVANTSVLKWGGKLLCLWEG 207
TD E Q F +R P++ + K G V++ ANT++ W G LL E
Sbjct: 109 TDRFQAEG--QAGRALFGKYRNPYTDNEAVK--G---VIRTAANTNIFFWRGMLLATKED 161
Query: 208 GDPYEIESGTLDTIGQ 223
G PY ++ +L+TIG+
Sbjct: 162 GPPYAMDPVSLETIGR 177
Score = 91 (37.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 510 GTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPKG--VEEDDGYLLVIEYA 567
G +L HF +D V+ +T+ G EP F+P+ EE DGY++ +
Sbjct: 424 GLFNSLGHFTWDGAVR--------ETFWAGPCATFQEPAFIPRAGSTEEGDGYIVALLNH 475
Query: 568 VSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHG 607
+ + R + I + +KI +G +A + +P L LG HG
Sbjct: 476 LDVLRNDVCIFDARKIAQGP--IAVIHLPFKLR--LGLHG 511
>TAIR|locus:2124489 [details] [associations]
symbol:NCED2 "nine-cis-epoxycarotenoid dioxygenase 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009688 GO:GO:0009535 EMBL:AL161548
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AL021710
EMBL:BT030365 IPI:IPI00523545 PIR:T04531 RefSeq:NP_193569.1
UniGene:At.32916 ProteinModelPortal:O49505 SMR:O49505 STRING:O49505
EnsemblPlants:AT4G18350.1 GeneID:827562 KEGG:ath:AT4G18350
TAIR:At4g18350 InParanoid:O49505 OMA:MNAWEDG PhylomeDB:O49505
ProtClustDB:PLN02258 BioCyc:MetaCyc:AT4G18350-MONOMER
Genevestigator:O49505 Uniprot:O49505
Length = 583
Score = 97 (39.2 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 46/184 (25%), Positives = 73/184 (39%)
Query: 90 VDGAIPSDFPSGTYYLTGPG-LFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVK 148
V+G IP D G Y G +F G H DG G + A + G Y ++ K
Sbjct: 124 VEGTIP-DCIDGVYIRNGANPMFEPTAGH--HLFDGDGMVHAVKI--TNGSASYACRFTK 178
Query: 149 TDAQVEEHD------PQTDTWRFTHRGPFSVL----KGGKKFGNTKVMKNVANTSVLKWG 198
T+ V+E P+ H G ++ +G N + VAN ++ +
Sbjct: 179 TERLVQEKRLGRPVFPKAIGELHGHSGIARLMLFYARGLCGLINNQNGVGVANAGLVYFN 238
Query: 199 GKLLCLWEGGDPYEI---ESGTLDTIGQLQMMDGGDSLGKNSKDLWDVAAEMLKPILYGV 255
+LL + E PY++ ++G L T+G+ DG + D + L + Y V
Sbjct: 239 NRLLAMSEDDLPYQLKITQTGDLQTVGRYDF-DGQLKSAMIAHPKLDPVTKELHALSYDV 297
Query: 256 FKMP 259
K P
Sbjct: 298 VKKP 301
Score = 94 (38.1 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 36/129 (27%), Positives = 59/129 (45%)
Query: 490 IINPTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIF 549
++N G+KT + A A P K+++ T ++ + G ++ GEP F
Sbjct: 461 MVNRNRLGRKTRFAFLAI------AYPWPKVSGFAKVDLCTGEMKKYIYGGEKYGGEPFF 514
Query: 550 VP----KGVE-EDDGYLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLG 604
+P G E EDDGY+ + + L I+N + L A +++P + P G
Sbjct: 515 LPGNSGNGEENEDDGYIFCHVHDEETKTSELQIINAVNL----KLEATIKLPSRV--PYG 568
Query: 605 FHG-FWDNN 612
FHG F D+N
Sbjct: 569 FHGTFVDSN 577
Score = 69 (29.3 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 30/146 (20%), Positives = 70/146 (47%)
Query: 263 LLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTFYEFDSNFKLLNKQEFNILDHLMIHDWA 322
+++H KLD L +S + ++ + ++ F + + E + MIHD+A
Sbjct: 277 MIAHPKLDPVTKELHALSYD----VVKKPYLKYFRFSPDGVKSPELEIPLETPTMIHDFA 332
Query: 323 FTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNPSKPTSPVYLLPRFPNKSVGVRD 382
T+ ++++ ++ + LG M +SG SP++ + S + ++P+ ++ +
Sbjct: 333 ITE-NFVVIPDQQVVFKLGEM--ISGKSPVVF-----DGEKVSRLGIMPKDATEASQII- 383
Query: 383 WRVPVEAPSQMWLLHVGNAFELKDVD 408
W V +P + + H+ NA+E + +
Sbjct: 384 W---VNSP-ETFCFHLWNAWESPETE 405
>ZFIN|ZDB-GENE-040426-1191 [details] [associations]
symbol:bcmo1b "beta-carotene 15,15'-monooxygenase
1b" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-1191 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:BC056789 IPI:IPI00503910
RefSeq:NP_956902.1 UniGene:Dr.84019 ProteinModelPortal:Q6PGY1
STRING:Q6PGY1 GeneID:393580 KEGG:dre:393580 CTD:393580
InParanoid:Q6PGY1 NextBio:20814600 Uniprot:Q6PGY1
Length = 525
Score = 113 (44.8 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 38/135 (28%), Positives = 68/135 (50%)
Query: 484 KSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRF 543
K + P IN ++ +K Y GTR +P + V K++V+T++ + W+ +
Sbjct: 404 KGLELPAINYKFNSKKNRYFY-----GTRVEWSPYP-NKVAKVDVVTRTHKIWTE-EECY 456
Query: 544 IGEPIFV--PKGVEEDDGYLLVIEYAVSIQRC-YLIILNPKKIGEGDALVARLEVPRHLN 600
EP+F+ P V+EDDG +L + + QR +L++L+ K E +AR + ++
Sbjct: 457 PSEPVFIASPDAVDEDDGVILSSVVSFNPQRPPFLVVLDAKSFKE----IARATIDASIH 512
Query: 601 FPLGFHGFW--DNNT 613
L HG + D +T
Sbjct: 513 MDL--HGLFIHDKST 525
Score = 101 (40.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 80 ETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGE 139
ET P+ V G+IP + GT GPGLF+ + S H DG + +F F GE
Sbjct: 11 ETPEPLKAD-VSGSIPP-WLQGTLLRNGPGLFSVGNTSYKHWFDGMALIHSFTFKD--GE 66
Query: 140 VKYMAKYVKTD 150
V Y +KY+K++
Sbjct: 67 VFYRSKYLKSE 77
>TAIR|locus:2032085 [details] [associations]
symbol:NCED9 "nine-cis-epoxycarotenoid dioxygenase 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0010162 "seed dormancy process"
evidence=IGI;RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC013430
GO:GO:0009570 GO:GO:0046872 GO:GO:0009688 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 ProtClustDB:PLN02258
IPI:IPI00528094 PIR:E96812 RefSeq:NP_177960.1 UniGene:At.34302
ProteinModelPortal:Q9M9F5 SMR:Q9M9F5 STRING:Q9M9F5 PaxDb:Q9M9F5
PRIDE:Q9M9F5 EnsemblPlants:AT1G78390.1 GeneID:844175
KEGG:ath:AT1G78390 TAIR:At1g78390 InParanoid:Q9M9F5 OMA:WMAVAER
PhylomeDB:Q9M9F5 BioCyc:MetaCyc:AT1G78390-MONOMER
Genevestigator:Q9M9F5 Uniprot:Q9M9F5
Length = 657
Score = 102 (41.0 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 48/210 (22%), Positives = 89/210 (42%)
Query: 405 KDVDGNTEIQIHACSCSYEWFNFQNLFGYNWQSGRLDP-----SIMNLKESEYQLLPHLV 459
KD I++ C C + W N +W+ D S M +S + +
Sbjct: 454 KDASSIQWIEVPDCFCFHLW-N-------SWEEPETDEVVVIGSCMTPPDSIFNEHDETL 505
Query: 460 QVSIS-LDVDGNCQKCTVEPLNQWKKSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHF 518
Q +S + ++ + T P+ + + + ++N G+KT Y A + P
Sbjct: 506 QSVLSEIRLNLKTGESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTE------PWP 559
Query: 519 PFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPKGV-EEDDGYLLVIEYAVSIQRCYLII 577
K+++ T ++ + G ++ GEP+F+P G EED GY++V + + L +
Sbjct: 560 KVSGFAKVDLSTGEIRKYIYGEGKYGGEPLFLPSGDGEEDGGYIMVFVHDEEKVKSELQL 619
Query: 578 LNPKKIGEGDALVARLEVPRHLNFPLGFHG 607
+N + L A + +P + P GFHG
Sbjct: 620 INAVNM----KLEATVTLPSRV--PYGFHG 643
Score = 90 (36.7 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 43/161 (26%), Positives = 66/161 (40%)
Query: 84 PITLHL-VDGAIPSDFPSGTYYLTGPG-LFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVK 141
P+ +L V G +P G Y G L G H DG G + A FD G V
Sbjct: 194 PVVHNLPVTGTVPECI-QGVYVRNGANPLHKPVSGH--HLFDGDGMVHAVRFDN--GSVS 248
Query: 142 YMAKYVKTDAQVEEHD------PQTDTWRFTHRGPFSVLKGGKK--FGNTKVMKN--VAN 191
Y ++ +T+ V+E + P+ H G ++ + FG VAN
Sbjct: 249 YACRFTETNRLVQERECGRPVFPKAIGELHGHLGIAKLMLFNTRGLFGLVDPTGGLGVAN 308
Query: 192 TSVLKWGGKLLCLWEGGDPYEI---ESGTLDTIGQLQMMDG 229
++ + G LL + E PY + ++G L+T G+ DG
Sbjct: 309 AGLVYFNGHLLAMSEDDLPYHVKVTQTGDLETSGRYDF-DG 348
Score = 60 (26.2 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 30/146 (20%), Positives = 66/146 (45%)
Query: 263 LLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTFYEFDSNFKLLNKQEFNILDHLMIHDWA 322
+++H K+D L +S + ++ + ++ F S+ + E + MIHD+A
Sbjct: 354 MIAHPKIDPETRELFALSYD----VVSKPYLKYFRFTSDGEKSPDVEIPLDQPTMIHDFA 409
Query: 323 FTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNPSKPTSPVYLLPRFPNKSVGVRD 382
T+ ++++ ++ + L M + G SP+ V K S +L + + ++
Sbjct: 410 ITE-NFVVIPDQQVVFRLPEM--IRGGSPV-----VYDEKKKSRFGILNKNAKDASSIQ- 460
Query: 383 WRVPVEAPSQMWLLHVGNAFELKDVD 408
W +E P + H+ N++E + D
Sbjct: 461 W---IEVPD-CFCFHLWNSWEEPETD 482
>UNIPROTKB|Q52008 [details] [associations]
symbol:lsdB "Lignostilbene-alpha,beta-dioxygenase isozyme
III" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron
ion binding" evidence=ISS] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 GO:GO:0050054 EMBL:S80637 PIR:JC4324
Uniprot:Q52008
Length = 490
Score = 89 (36.4 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 36/156 (23%), Positives = 63/156 (40%)
Query: 464 SLDVDGNCQK-CTVEPLNQWKKSSDFPIINPTYSGQKTTCIYAAT-------SLGTRRAL 515
++D+ N + V L W +FP ++ Y GQ + RA
Sbjct: 332 TVDLGSNSEDFAEVRQLTSW--IDEFPRVDARYVGQPYRHGWGLVMDPEMEMEFARGRA- 388
Query: 516 PHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPKGVE--EDDGYLLVIEYAVSIQRC 573
F + + + T +W G + I EP FVP+ + E DGY++ + +
Sbjct: 389 SGFKMNRIGHWDHATGKEDSWWCGPQSIIQEPCFVPRMADSAEGDGYIIALVDNLITNYS 448
Query: 574 YLIILNPKKIGEGDALVARLEVPRHLNFPLGFHGFW 609
L++L+ + +G + R ++P L G HG W
Sbjct: 449 DLVVLDALNLKDGP--IGRAKLPIRLRS--GLHGNW 480
Score = 84 (34.6 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 38/149 (25%), Positives = 65/149 (43%)
Query: 257 KMPPKRLLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTFYEFDSNFKLLNKQEFNILDHL 316
K+ + +H K+D A +L ++ +++E D LL + EF + +
Sbjct: 158 KLKNQTFSAHAKIDPVTGNFCNFGYAATGLLT--TDCSYFEIDPAGNLLFETEFQVPYYC 215
Query: 317 MIHDWAFTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNPSKPTSPVYL--LPRFP 374
M+HD+ T+ HY +F ++ L + + T PV+L +PR P
Sbjct: 216 MMHDYGLTE-HYAIF------HIVPCSPNWDRLKAGLPHFGFDT---TLPVWLGVVPRGP 265
Query: 375 NKSVGVRDWRVPVEAPSQMWLLHVGNAFE 403
V +D R +AP ++ HV NAFE
Sbjct: 266 G--VTNKDVRW-FKAPKTIFASHVMNAFE 291
Score = 74 (31.1 bits), Expect = 5.9e-08, Sum P(3) = 5.9e-08
Identities = 33/140 (23%), Positives = 56/140 (40%)
Query: 90 VDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVKT 149
V+G IP+ GT++ P +G G + F F G++ + +Y +T
Sbjct: 28 VEGEIPAQL-DGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHD--GKIDFRQRYAQT 84
Query: 150 DAQVEEHDPQTDTWRFTHRGPFSVLKGGKKFGNTKVMKNVANTSVLKWGGKLLCLWEGGD 209
D E + +R P + G +++ ANT+V+ GKL + E
Sbjct: 85 DKWKVERKAGKSLFG-AYRNPLT--DDASVQG---MIRGTANTNVMVHAGKLYAMKEDSP 138
Query: 210 PYEIESGTLDTIGQLQMMDG 229
++ TL+T G DG
Sbjct: 139 CLIMDPLTLETEGYTNF-DG 157
>UNIPROTKB|F1P321 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00584895 EMBL:AADN02012423
Ensembl:ENSGALT00000018373 Uniprot:F1P321
Length = 449
Score = 156 (60.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 52/128 (40%), Positives = 64/128 (50%)
Query: 487 DFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIG 545
+FP IN Y G+ T Y LG L HF D + KLNV TK W +
Sbjct: 333 EFPQINYKKYGGKPYTYTYG---LG----LNHFVPDRLCKLNVKTKETWVWQEPDS-YPS 384
Query: 546 EPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNF 601
EPIFV P +EEDDG +L VI + YL+ILN K + E VAR EV +N
Sbjct: 385 EPIFVSHPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSE----VARAEV--EVNI 438
Query: 602 PLGFHGFW 609
P+ FHG +
Sbjct: 439 PVTFHGLF 446
>UNIPROTKB|F1NE28 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:AADN02012423 IPI:IPI00821971
Ensembl:ENSGALT00000037886 Uniprot:F1NE28
Length = 458
Score = 156 (60.0 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 52/128 (40%), Positives = 64/128 (50%)
Query: 487 DFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIG 545
+FP IN Y G+ T Y LG L HF D + KLNV TK W +
Sbjct: 342 EFPQINYKKYGGKPYTYTYG---LG----LNHFVPDRLCKLNVKTKETWVWQEPDS-YPS 393
Query: 546 EPIFV--PKGVEEDDGYLL--VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNF 601
EPIFV P +EEDDG +L VI + YL+ILN K + E VAR EV +N
Sbjct: 394 EPIFVSHPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSE----VARAEV--EVNI 447
Query: 602 PLGFHGFW 609
P+ FHG +
Sbjct: 448 PVTFHGLF 455
>RGD|70981 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase 1" species:10116
"Rattus norvegicus" [GO:0001523 "retinoid metabolic process"
evidence=IEA;ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IEA;ISO;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0042572 "retinol
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 116 (45.9 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 76/302 (25%), Positives = 126/302 (41%)
Query: 311 NILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTA-VSGLSPMISALSVNPSKPTSPVYL 369
++L H + T+ + + KLD+L TA + G+S S ++ T +++
Sbjct: 229 SLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVS-WASCMTFCKEDKTY-IHI 286
Query: 370 LPRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCSYEWFNFQN 429
+ + K V + + P M + H NA+E +D ++ + + Y+ F N
Sbjct: 287 IDQKTRKPVPTKFYTDP------MVVFHHVNAYE-EDGCVLFDVIAYEDNSLYQLFYLAN 339
Query: 430 LFGYNWQSGRLDPSIMNLKESEYQLLPHLVQVSISLDVDGNCQKCTVEPLNQWKKSSDFP 489
L + RL S+ L+ L H V +V N K + K+ D
Sbjct: 340 LNKDFEEKSRLT-SVPTLRRFAVPL--H---VDKDAEVGSNLVKVSSTTATALKEKDDHV 393
Query: 490 IINPT--YSGQKTTCI-YAATSLGTR----RALPHFPFDT-VVKLNVLTKSVQTWSVGTR 541
P Y G + I YA R + P T ++K +VLTKS WS +
Sbjct: 394 YCQPEVLYEGLELPRINYAHNGKPYRYIFAAEVQWSPVPTKILKYDVLTKSSLKWSEESC 453
Query: 542 RFIGEPIFVPK-GV-EEDDGYLLVIEYAVSIQRC-YLIILNPKKIGEGDALVARLEVPRH 598
+ EP+FVP G +EDDG +L + Q+ +L+IL+ K E A ++V H
Sbjct: 454 -WPAEPLFVPTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTE--LARASVDVDMH 510
Query: 599 LN 600
L+
Sbjct: 511 LD 512
Score = 89 (36.4 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 71 QFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRA 130
+ +F + E P+ V G+IP+ + GT GPG+ T H DG L +
Sbjct: 2 EIIFGRNKKEQLEPLRA-TVTGSIPA-WLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHS 59
Query: 131 FEFDGVTGEVKYMAKYVKTD 150
F GEV Y +KY+++D
Sbjct: 60 FSIRD--GEVFYRSKYLQSD 77
>UNIPROTKB|Q91XT5 [details] [associations]
symbol:Bcmo1 "Beta,beta-carotene 15,15'-monooxygenase"
species:10116 "Rattus norvegicus" [GO:0004497 "monooxygenase
activity" evidence=IEA] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 116 (45.9 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 76/302 (25%), Positives = 126/302 (41%)
Query: 311 NILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTA-VSGLSPMISALSVNPSKPTSPVYL 369
++L H + T+ + + KLD+L TA + G+S S ++ T +++
Sbjct: 229 SLLSPSYYHSFGVTENYVVFLEQPFKLDILKMATAYMRGVS-WASCMTFCKEDKTY-IHI 286
Query: 370 LPRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCSYEWFNFQN 429
+ + K V + + P M + H NA+E +D ++ + + Y+ F N
Sbjct: 287 IDQKTRKPVPTKFYTDP------MVVFHHVNAYE-EDGCVLFDVIAYEDNSLYQLFYLAN 339
Query: 430 LFGYNWQSGRLDPSIMNLKESEYQLLPHLVQVSISLDVDGNCQKCTVEPLNQWKKSSDFP 489
L + RL S+ L+ L H V +V N K + K+ D
Sbjct: 340 LNKDFEEKSRLT-SVPTLRRFAVPL--H---VDKDAEVGSNLVKVSSTTATALKEKDDHV 393
Query: 490 IINPT--YSGQKTTCI-YAATSLGTR----RALPHFPFDT-VVKLNVLTKSVQTWSVGTR 541
P Y G + I YA R + P T ++K +VLTKS WS +
Sbjct: 394 YCQPEVLYEGLELPRINYAHNGKPYRYIFAAEVQWSPVPTKILKYDVLTKSSLKWSEESC 453
Query: 542 RFIGEPIFVPK-GV-EEDDGYLLVIEYAVSIQRC-YLIILNPKKIGEGDALVARLEVPRH 598
+ EP+FVP G +EDDG +L + Q+ +L+IL+ K E A ++V H
Sbjct: 454 -WPAEPLFVPTPGAKDEDDGVILSAIISTDPQKLPFLLILDAKSFTE--LARASVDVDMH 510
Query: 599 LN 600
L+
Sbjct: 511 LD 512
Score = 89 (36.4 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 25/80 (31%), Positives = 38/80 (47%)
Query: 71 QFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRA 130
+ +F + E P+ V G+IP+ + GT GPG+ T H DG L +
Sbjct: 2 EIIFGRNKKEQLEPLRA-TVTGSIPA-WLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHS 59
Query: 131 FEFDGVTGEVKYMAKYVKTD 150
F GEV Y +KY+++D
Sbjct: 60 FSIRD--GEVFYRSKYLQSD 77
>ASPGD|ASPL0000049803 [details] [associations]
symbol:AN1704 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:XP_659308.1 ProteinModelPortal:Q5BCM6
EnsemblFungi:CADANIAT00008347 GeneID:2875405 KEGG:ani:AN1704.2
HOGENOM:HOG000166169 OrthoDB:EOG4WDHM3 Uniprot:Q5BCM6
Length = 575
Score = 121 (47.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 43/125 (34%), Positives = 56/125 (44%)
Query: 485 SSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFI 544
S + +NP Y YA T R L F D +VK + LT + WS +
Sbjct: 450 SPELATLNPFYITHPHRYTYAVTD----RGLSTF-VDGIVKFDSLTGETKLWSEHAQS-P 503
Query: 545 GEPIFV--PKGVEEDDGYLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFP 602
GE IFV P G EEDDG LL + R YL++L+ + E + R V + F
Sbjct: 504 GEAIFVADPDGKEEDDGVLLSVVLDGRSGRSYLLVLDAGNMKE----IGRASVNAAVGF- 558
Query: 603 LGFHG 607
GFHG
Sbjct: 559 -GFHG 562
Score = 83 (34.3 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 39/124 (31%), Positives = 57/124 (45%)
Query: 62 DSTAAF--WDYQFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDD--HGS 117
D++ F W + F + + T PI L V G+IP + +GT Y TGPG + D HG+
Sbjct: 8 DTSVHFNDWPNEQGFDANHEQKT-PIELS-VTGSIPH-YAAGTLYRTGPGRYKVDTKHGN 64
Query: 118 TV---HPLDGHGYLRAF-----EFDGVTGEVKYMAKYVKTDAQVE-EHDPQTDTWRFTHR 168
T H DG F E + V Y +++ TD +E H+ + RF+
Sbjct: 65 TFQVSHWFDGFSQTHRFQLVPPESPDSSMRVLYNSRF-STDDMIEYAHETGSLGDRFSFG 123
Query: 169 GPFS 172
G FS
Sbjct: 124 G-FS 126
>ZFIN|ZDB-GENE-010509-1 [details] [associations]
symbol:bco2l "beta-carotene 15, 15-dioxygenase 2,
like" species:7955 "Danio rerio" [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
ZFIN:ZDB-GENE-010509-1 GO:GO:0016702 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AJ290391
IPI:IPI00493963 RefSeq:NP_571874.1 UniGene:Dr.79440 GeneID:84041
KEGG:dre:84041 CTD:84041 InParanoid:Q90WH3 NextBio:20934203
ArrayExpress:Q90WH3 Uniprot:Q90WH3
Length = 549
Score = 99 (39.9 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 487 DFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIG 545
+FP IN Y+ + YA G H D+++K+++ K ++ W F
Sbjct: 433 EFPQINYANYNARPYRYFYAC-GFG------HVFGDSLLKMDLEGKKLKVWR-HAGLFPS 484
Query: 546 EPIFVPK--GVEEDDGYLL-VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFP 602
EP+F+P +EDDG ++ VI + +L++L+ K E + R EVP ++ P
Sbjct: 485 EPVFIPAPDAQDEDDGVVMSVIITPREKKSSFLLVLDAKTFTE----LGRAEVP--VDIP 538
Query: 603 LGFHGFWDNNT 613
G HG ++ +
Sbjct: 539 YGTHGLFNEKS 549
Score = 97 (39.2 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 25/83 (30%), Positives = 41/83 (49%)
Query: 75 VSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFD 134
VS E PIT L+ G IPS + +G++ GPG F H DG + F
Sbjct: 31 VSSVEEIPDPITT-LIKGQIPS-WINGSFLRNGPGKFEFGESKFTHWFDGMALMHRFNIK 88
Query: 135 GVTGEVKYMAKYVKTDAQVEEHD 157
G+V Y ++++++D+ V+ +
Sbjct: 89 D--GQVTYSSRFLQSDSYVQNSE 109
Score = 49 (22.3 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 20/86 (23%), Positives = 38/86 (44%)
Query: 319 HDWAFTDTHYILFANRVKLDVLGSMT-AVSGLSPMISALSVNPSKPTSPVYLLPRFPNKS 377
H + ++ + + +KLD+L M ++G S +S NP T ++ R +
Sbjct: 256 HSFVMSENYIVFIEQPIKLDLLKFMLYRIAGKS-FHKVMSWNPELDTI-FHVADRHTGQL 313
Query: 378 VGVRDWRVPVEAPSQMWLLHVGNAFE 403
+ + + S M+ LH NA+E
Sbjct: 314 LNTKYYS------SAMFALHQINAYE 333
>UNIPROTKB|Q9I993 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9031 "Gallus gallus" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA]
[GO:0001523 "retinoid metabolic process" evidence=IDA]
UniPathway:UPA00912 GO:GO:0046872 GO:GO:0004497 GO:GO:0042572
GO:GO:0001523 EMBL:AJ271386 IPI:IPI00595044 RefSeq:NP_989966.1
UniGene:Gga.41 STRING:Q9I993 Ensembl:ENSGALT00000008685
GeneID:395346 KEGG:gga:395346 CTD:53630 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InParanoid:Q9I993 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 BioCyc:MetaCyc:MONOMER-17624 NextBio:20815431
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Uniprot:Q9I993
Length = 526
Score = 113 (44.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 79/309 (25%), Positives = 132/309 (42%)
Query: 311 NILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTA-VSGLSPMISALSVNPSKPTSPVYL 369
++L H + T+ + + KLD++ TA + G++ S LS + T +
Sbjct: 228 SLLQPSYYHSFGITENYIVFIEQPFKLDIVKLATAYIRGVN-WASCLSFHKEDKTW-FHF 285
Query: 370 LPRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHAC--SCSYEWFNF 427
+ R K V + + +A + L H NA+E DG+ I A + Y+ F
Sbjct: 286 VDRKTKKEVSTKFY---TDA---LVLYHHINAYE---EDGHVVFDIVAYRDNSLYDMFYL 336
Query: 428 QNL---FGYNWQSGRLDPS---IMNLK-ESEYQLLPHLVQVSISL----DVDGNCQKCTV 476
+ L F N + + ++ L+ + + ++ +LV++ S + DG+ C
Sbjct: 337 KKLDKDFEVNNKLTSIPTCKRFVVPLQYDKDAEVGSNLVKLPTSATAVKEKDGSIY-CQP 395
Query: 477 EPLNQWKKSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDT-VVKLNVLTKSVQT 535
E L + + P +N Y+G+K +YA + P T + KLNV TK V
Sbjct: 396 EILCE---GIELPRVNYDYNGKKYKYVYATE-------VQWSPVPTKIAKLNVQTKEVLH 445
Query: 536 WSVGTRRFIGEPIFVPK--GVEEDDGYLLVIEYAVSIQRC-YLIILNPKKIGE-GDALVA 591
W + EPIFVP EED+G +L + +L+IL+ K E G A V
Sbjct: 446 WGED-HCWPSEPIFVPSPDAREEDEGVVLTCVVVSEPNKAPFLLILDAKTFKELGRATV- 503
Query: 592 RLEVPRHLN 600
V HL+
Sbjct: 504 --NVEMHLD 510
Score = 88 (36.0 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 73 LFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFE 132
+F + E PI V G +P+ + G GPG+ T H DG L +F
Sbjct: 4 IFNRNKEEHPEPIKAE-VQGQLPT-WLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFT 61
Query: 133 FDGVTGEVKYMAKYVKTD 150
F GEV Y +KY+++D
Sbjct: 62 FKN--GEVYYRSKYLRSD 77
>UNIPROTKB|E1C8E0 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016116
"carotenoid metabolic process" evidence=IEA] [GO:0016121 "carotene
catabolic process" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0051881 "regulation of mitochondrial membrane potential"
evidence=IEA] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] GO:GO:0055114
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121 EMBL:AADN02058015
IPI:IPI00602723 Ensembl:ENSGALT00000012775 Uniprot:E1C8E0
Length = 548
Score = 129 (50.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 487 DFPIINPT-YSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIG 545
+FP IN + YSG+K Y G R HF D+++K++V TK+ + W +
Sbjct: 433 EFPQINYSQYSGRKYRYFYGC---GFR----HFIGDSLMKVDVETKNFKIWQEDGS-YPS 484
Query: 546 EPIFVP--KGVEEDDGYLLVIEYAVSIQR-CYLIILNPKKIGEGDALVARLEVPRHLNFP 602
EP+FVP ED G +L + + R +L++L+ + E + R EVP + P
Sbjct: 485 EPVFVPVPNATAEDSGVILSVVISPDENRSAFLLVLDAETFRE----LGRAEVP--VQMP 538
Query: 603 LGFHGFWDN 611
GFHG + +
Sbjct: 539 YGFHGIFSS 547
Score = 70 (29.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 36/146 (24%), Positives = 60/146 (41%)
Query: 80 ETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGE 139
ET PI + G IP + +G GPG F H DG L F+ G
Sbjct: 36 ETPEPIPAK-IKGHIPG-WINGNLLRNGPGKFEFGEEKYNHWFDGMALLHQFQLRN--GT 91
Query: 140 VKYMAKYVKTDAQV--EEHDP--QTDTWRFTHRGPF-SVL-KGGKKFGNTKVMKNVANTS 193
V Y +K++++++ + +H+ ++ P SV + +F K N AN S
Sbjct: 92 VTYQSKFLQSNSYLINNQHNRIVVSEFGTLAMPDPCKSVFARFMSRFDPPKPSDN-ANVS 150
Query: 194 VLKWGGKLLCLWEGGDPYEIESGTLD 219
+ + G E Y+++ TL+
Sbjct: 151 YVVYKGDYYVTGENNCMYKVDPETLE 176
>UNIPROTKB|Q9HAY6 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9606 "Homo sapiens" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0001523
"retinoid metabolic process" evidence=IDA;TAS] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0008202 "steroid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0035238 "vitamin A biosynthetic process"
evidence=NAS] [GO:0042574 "retinal metabolic process" evidence=NAS]
Reactome:REACT_111217 UniPathway:UPA00912 GO:GO:0005829
GO:GO:0008202 GO:GO:0046872 GO:GO:0004497 EMBL:CH471114
GO:GO:0042572 GO:GO:0042574 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AF294900 EMBL:AK001592
EMBL:BC126210 EMBL:BC126212 IPI:IPI00307216 RefSeq:NP_059125.2
UniGene:Hs.212172 ProteinModelPortal:Q9HAY6 SMR:Q9HAY6
IntAct:Q9HAY6 STRING:Q9HAY6 PhosphoSite:Q9HAY6 DMDM:41688803
PRIDE:Q9HAY6 DNASU:53630 Ensembl:ENST00000258168 GeneID:53630
KEGG:hsa:53630 UCSC:uc002fgn.1 GeneCards:GC16P081272
HGNC:HGNC:13815 HPA:HPA043811 MIM:115300 MIM:605748
neXtProt:NX_Q9HAY6 Orphanet:199285 PharmGKB:PA37812
InParanoid:Q9HAY6 PhylomeDB:Q9HAY6 BioCyc:MetaCyc:HS06050-MONOMER
ChiTaRS:BCMO1 GenomeRNAi:53630 NextBio:56108 ArrayExpress:Q9HAY6
Bgee:Q9HAY6 CleanEx:HS_BCMO1 Genevestigator:Q9HAY6
GermOnline:ENSG00000135697 GO:GO:0035238 Uniprot:Q9HAY6
Length = 547
Score = 100 (40.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 73/323 (22%), Positives = 139/323 (43%)
Query: 311 NILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTAVSGLSPMISALSVNPSKPTSPVYLL 370
++L H + T+ + I +LD+L TA S L+ + + T ++++
Sbjct: 229 SLLSPSYYHSFGVTENYVIFLEQPFRLDILKMATAYIRRMSWASCLAFHREEKTY-IHII 287
Query: 371 PRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCS--YEWFNFQ 428
+ + V + + +A M + H NA+E DG + A + Y+ F
Sbjct: 288 DQRTRQPVQTKFY---TDA---MVVFHHVNAYE---EDGCIVFDVIAYEDNSLYQLFYLA 338
Query: 429 NLFGYNWQSGRLD--PSIMNLK-----ESEYQLLPHLVQVSISL-----DVDGNCQKCTV 476
NL ++ RL P++ + ++ +L++V+ + + DG C
Sbjct: 339 NLNQDFKENSRLTSVPTLRRFAVPLHVDKNAEVGTNLIKVASTTATALKEEDGQVY-CQP 397
Query: 477 EPLNQWKKSSDFPIINPTYSGQKTTCIYAATSLGTRRALPHFPFDT-VVKLNVLTKSVQT 535
E L + + P +N ++G++ ++A G + + P T ++K ++LTKS
Sbjct: 398 EFLYE---GLELPRVNYAHNGKQYRYVFAT---GVQWS----PIPTKIIKYDILTKSSLK 447
Query: 536 WSVGTRRFIGEPIFVPK-GV-EEDDGYLLVIEYAVSIQRC-YLIILNPKKIGEGDALVAR 592
W + EP+FVP G +EDDG +L + Q+ +L+IL+ K E A
Sbjct: 448 WREDDC-WPAEPLFVPAPGAKDEDDGVILSAIVSTDPQKLPFLLILDAKSFTE--LARAS 504
Query: 593 LEVPRHLNFPLGFHG-FWDNNTW 614
++V H++ HG F + W
Sbjct: 505 VDVDMHMDL----HGLFITDMDW 523
Score = 90 (36.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 26/78 (33%), Positives = 36/78 (46%)
Query: 73 LFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFE 132
+F R E P+ V G IP+ + GT GPG+ T H DG L +F
Sbjct: 4 IFGRNRKEQLEPVRAK-VTGKIPA-WLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFT 61
Query: 133 FDGVTGEVKYMAKYVKTD 150
GEV Y +KY+++D
Sbjct: 62 IRD--GEVYYRSKYLRSD 77
>MGI|MGI:2177469 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IC] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016116 "carotenoid metabolic
process" evidence=IMP] [GO:0016119 "carotene metabolic process"
evidence=ISO;IDA] [GO:0016121 "carotene catabolic process"
evidence=ISO;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISO;IDA] [GO:0042573 "retinoic
acid metabolic process" evidence=NAS] [GO:0042574 "retinal
metabolic process" evidence=NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=ISO;IDA] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IMP] MGI:MGI:2177469
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE OrthoDB:EOG45B1FD
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 EMBL:AJ290392
IPI:IPI00118726 RefSeq:NP_573480.1 UniGene:Mm.390149
ProteinModelPortal:Q99NF1 SMR:Q99NF1 PhosphoSite:Q99NF1
PaxDb:Q99NF1 PRIDE:Q99NF1 Ensembl:ENSMUST00000119103 GeneID:170752
KEGG:mmu:170752 InParanoid:Q99NF1 NextBio:370330 Bgee:Q99NF1
Genevestigator:Q99NF1 GermOnline:ENSMUSG00000032066 Uniprot:Q99NF1
Length = 532
Score = 119 (46.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 40/125 (32%), Positives = 64/125 (51%)
Query: 487 DFPIIN-PTYSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIG 545
+FP IN ++G+K + Y G R H D+++K++V K+++ W +
Sbjct: 417 EFPQINYGRFNGKKYSFFYGC---GFR----HLVGDSLIKVDVTNKTLRVWRE-EGFYPS 468
Query: 546 EPIFVP-KGV-EEDDGYLL-VIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFP 602
EP+FVP G EED G +L V+ + +L++L+ K E + R EVP + P
Sbjct: 469 EPVFVPVPGADEEDSGVILSVVITPNQSESNFLLVLDAKSFTE----LGRAEVP--VQMP 522
Query: 603 LGFHG 607
GFHG
Sbjct: 523 YGFHG 527
Score = 69 (29.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 23/73 (31%), Positives = 30/73 (41%)
Query: 81 TTAPITLHLVDGAIPSDFPS--GTYYL-TGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVT 137
TTA TL V + P Y L GPG F H DG L F +
Sbjct: 16 TTAEETLSAVSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRME--R 73
Query: 138 GEVKYMAKYVKTD 150
G V Y +K++++D
Sbjct: 74 GTVTYKSKFLQSD 86
>UNIPROTKB|Q53353 [details] [associations]
symbol:Q53353 "Lignostilbene-alpha,beta-dioxygenase isozyme
I" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron ion
binding" evidence=IDA] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 EMBL:S65040 PIR:JN0595
ProteinModelPortal:Q53353 GO:GO:0050054 Uniprot:Q53353
Length = 485
Score = 89 (36.4 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 24/91 (26%), Positives = 44/91 (48%)
Query: 521 DTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPKGVE--EDDGYLLVIEYAVSIQRCYLIIL 578
+T+ +++ T +W G R I EP F+P+ + E DGY++ + L I
Sbjct: 389 NTLGHIDLATGKSSSWWAGPRCAIQEPCFIPRSPDAPEGDGYVIALVDDHVANYSDLAIF 448
Query: 579 NPKKIGEGDALVARLEVPRHLNFPLGFHGFW 609
+ + + +G +AR ++P + G HG W
Sbjct: 449 DAQHVDQGP--IARAKLPVRIR--QGLHGNW 475
Score = 71 (30.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 31/140 (22%), Positives = 56/140 (40%)
Query: 90 VDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVKT 149
++G +P +GT++ P +G G + F F G++ + +Y +T
Sbjct: 28 IEGEVPPQL-NGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHD--GKIDFRQRYAQT 84
Query: 150 DAQVEEHDPQTDTWRFTHRGPFSVLKGGKKFGNTKVMKNVANTSVLKWGGKLLCLWEGGD 209
D E + +R P + G +++ ANT+V+ GKL + E
Sbjct: 85 DKWKVERKAGKSLFG-AYRNPLT--DDASVQG---MIRGTANTNVMVHAGKLYAMKEDSP 138
Query: 210 PYEIESGTLDTIGQLQMMDG 229
++ TL+T G DG
Sbjct: 139 CLIMDPLTLETEGYTNF-DG 157
Score = 60 (26.2 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 257 KMPPKRLLSHYKLDAPRNRLLTVSCNAEDMLLPRSNFTFYEFDSNFKLLNKQEFNILDHL 316
K+ + +H K+D L + A+ ++ + + E KLL + F +
Sbjct: 158 KLQSQTFCAHPKIDPVTGNLCAFAYGAKGLMT--LDMAYIEISPTGKLLKEIPFQNPYYC 215
Query: 317 MIHDWAFTDTHYILFA 332
M+HD+ T+ Y +FA
Sbjct: 216 MMHDFGVTED-YAVFA 230
>UNIPROTKB|Q8HXG8 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9541 "Macaca fascicularis" [GO:0016119 "carotene metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] GO:GO:0005739
GO:GO:0046872 GO:GO:0016702 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AB097557
ProteinModelPortal:Q8HXG8 GO:GO:0016119 Uniprot:Q8HXG8
Length = 556
Score = 119 (46.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 53/176 (30%), Positives = 81/176 (46%)
Query: 442 PSIMNLKESEYQLLPHLVQVSISL--DVDGNCQKCTVEPLNQ--WKKSS--DFP-IINPT 494
P ++L E L L S S DG C+ E L+Q +K +FP I
Sbjct: 391 PLNVSLNAPEGDNLSPLSYTSASAVKQADGTIW-CSHENLHQEDLEKEGGIEFPQIYYGQ 449
Query: 495 YSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVP-KG 553
+SG+K Y G R H D+++K++V+ K+++ W + EP+FVP G
Sbjct: 450 FSGKKYRFFYGC---GFR----HLVGDSLIKVDVVNKTLKVWREDGF-YPSEPVFVPVPG 501
Query: 554 VEEDDG--YLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHG 607
E+DG L V+ + +L++L+ K E + R EVP + P GFHG
Sbjct: 502 TNEEDGGVILSVVITPNQNESNFLLVLDAKNFEE----LGRAEVP--VQMPYGFHG 551
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 100 SGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVKTD 150
+G+ GPG F H DG L F G V Y +K++++D
Sbjct: 58 NGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRM--AKGTVTYRSKFLQSD 106
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 8/32 (25%), Positives = 19/32 (59%)
Query: 421 SYEWFNFQNLFGYNWQSGRLDPSIMNLKESEY 452
+Y N FG++++ R+ P ++L+E+ +
Sbjct: 212 AYNMGNSFGPFGFSYKVIRVPPEKVDLEETTH 243
>UNIPROTKB|Q9BYV7 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016119 "carotene metabolic process"
evidence=IDA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IDA] [GO:0042573 "retinoic acid
metabolic process" evidence=NAS] [GO:0042574 "retinal metabolic
process" evidence=NAS] [GO:0005622 "intracellular" evidence=IC]
[GO:0055114 "oxidation-reduction process" evidence=IDA] [GO:0016121
"carotene catabolic process" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISS;TAS] [GO:0016116 "carotenoid metabolic
process" evidence=ISS] [GO:0051881 "regulation of mitochondrial
membrane potential" evidence=ISS] [GO:2000377 "regulation of
reactive oxygen species metabolic process" evidence=ISS]
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AF276432 EMBL:AK027801 EMBL:EF444956
EMBL:AP002884 EMBL:AJ290393 IPI:IPI00472555 IPI:IPI00479961
IPI:IPI00978312 RefSeq:NP_001032367.2 RefSeq:NP_001243326.1
UniGene:Hs.728325 ProteinModelPortal:Q9BYV7 SMR:Q9BYV7
STRING:Q9BYV7 PhosphoSite:Q9BYV7 DMDM:308153680 PaxDb:Q9BYV7
PRIDE:Q9BYV7 Ensembl:ENST00000357685 Ensembl:ENST00000393032
Ensembl:ENST00000438022 Ensembl:ENST00000526088
Ensembl:ENST00000531169 GeneID:83875 KEGG:hsa:83875 UCSC:uc001pne.1
UCSC:uc009yyn.3 CTD:83875 GeneCards:GC11P112046 HGNC:HGNC:18503
HPA:HPA039825 HPA:HPA040695 MIM:611740 neXtProt:NX_Q9BYV7
PharmGKB:PA162377424 InParanoid:Q9BYV7 KO:K10252 OMA:VSLNAPE
OrthoDB:EOG45B1FD BioCyc:MetaCyc:G66-33846-MONOMER ChiTaRS:BCO2
GenomeRNAi:83875 NextBio:72911 ArrayExpress:Q9BYV7 Bgee:Q9BYV7
CleanEx:HS_BCO2 Genevestigator:Q9BYV7 GermOnline:ENSG00000197580
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 Uniprot:Q9BYV7
Length = 579
Score = 117 (46.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 52/176 (29%), Positives = 81/176 (46%)
Query: 442 PSIMNLKESEYQLLPHLVQVSISL--DVDGNCQKCTVEPLNQ--WKKSS--DFP-IINPT 494
P ++L E L L S S DG C+ E L+Q +K +FP I
Sbjct: 414 PLNVSLNAPEGDNLSPLSYTSASAVKQADGTIW-CSHENLHQEDLEKEGGIEFPQIYYDR 472
Query: 495 YSGQKTTCIYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIGEPIFVPK-G 553
+SG+K Y G R H D+++K++V+ K+++ W + EP+FVP G
Sbjct: 473 FSGKKYHFFYGC---GFR----HLVGDSLIKVDVVNKTLKVWREDGF-YPSEPVFVPAPG 524
Query: 554 VEEDDG--YLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPLGFHG 607
E+DG L V+ + ++++L+ K E + R EVP + P GFHG
Sbjct: 525 TNEEDGGVILSVVITPNQNESNFILVLDAKNFEE----LGRAEVP--VQMPYGFHG 574
Score = 56 (24.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/51 (29%), Positives = 22/51 (43%)
Query: 100 SGTYYLTGPGLFTDDHGSTVHPLDGHGYLRAFEFDGVTGEVKYMAKYVKTD 150
+G+ GPG F H DG L F G V Y +K++++D
Sbjct: 81 NGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRM--AKGTVTYRSKFLQSD 129
>UNIPROTKB|Q83CU2 [details] [associations]
symbol:CBU_1011 "Lignostilbene-alpha,beta-dioxygenase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 125 (49.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 487 DFPIINPTYSGQKTTC-IYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIG 545
+ P IN S K +Y +G+ + P+ + ++K++V K+ + W T + G
Sbjct: 277 ELPRINYFLSNTKNYLFVYG---VGSDKNDPNNFLNRLLKIDVQQKATKIWKE-TMCYPG 332
Query: 546 EPIFV--PKGVEEDDGYLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPL 603
EP+FV P +EDDG +L + +L+IL+ E +AR VP H+ P
Sbjct: 333 EPVFVSLPNAKKEDDGVILSVVLNAQKGNSFLLILDAVSFKE----IARASVPHHI--PF 386
Query: 604 GFHG 607
GFHG
Sbjct: 387 GFHG 390
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 115 HGSTVHPLDGHGYLRAFEFDGVTGEVKYM 143
HG T + G LR +E + + V Y+
Sbjct: 241 HGETNKNIVSAGELRRYEINLLDSSVNYV 269
Score = 37 (18.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 190 ANTSVLKWGGKLLCLWEGGDPYEIESGTLDTIGQLQMMD 228
AN +V K + L E P + TL+ +G + D
Sbjct: 44 ANVNVSMIADKFVALTETPMPIVFDPQTLERMGVINYED 82
>TIGR_CMR|CBU_1011 [details] [associations]
symbol:CBU_1011 "dioxygenase, putative" species:227377
"Coxiella burnetii RSA 493" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 125 (49.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 38/124 (30%), Positives = 61/124 (49%)
Query: 487 DFPIINPTYSGQKTTC-IYAATSLGTRRALPHFPFDTVVKLNVLTKSVQTWSVGTRRFIG 545
+ P IN S K +Y +G+ + P+ + ++K++V K+ + W T + G
Sbjct: 277 ELPRINYFLSNTKNYLFVYG---VGSDKNDPNNFLNRLLKIDVQQKATKIWKE-TMCYPG 332
Query: 546 EPIFV--PKGVEEDDGYLLVIEYAVSIQRCYLIILNPKKIGEGDALVARLEVPRHLNFPL 603
EP+FV P +EDDG +L + +L+IL+ E +AR VP H+ P
Sbjct: 333 EPVFVSLPNAKKEDDGVILSVVLNAQKGNSFLLILDAVSFKE----IARASVPHHI--PF 386
Query: 604 GFHG 607
GFHG
Sbjct: 387 GFHG 390
Score = 39 (18.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 115 HGSTVHPLDGHGYLRAFEFDGVTGEVKYM 143
HG T + G LR +E + + V Y+
Sbjct: 241 HGETNKNIVSAGELRRYEINLLDSSVNYV 269
Score = 37 (18.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 190 ANTSVLKWGGKLLCLWEGGDPYEIESGTLDTIGQLQMMD 228
AN +V K + L E P + TL+ +G + D
Sbjct: 44 ANVNVSMIADKFVALTETPMPIVFDPQTLERMGVINYED 82
>UNIPROTKB|F1N3B7 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
OMA:ITENYIV GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:DAAA02046109 EMBL:DAAA02046110 IPI:IPI00702818
Ensembl:ENSBTAT00000048748 Uniprot:F1N3B7
Length = 494
Score = 83 (34.3 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 69/288 (23%), Positives = 120/288 (41%)
Query: 311 NILDHLMIHDWAFTDTHYILFANRVKLDVLGSMTA-VSGLSPMISALSVNPSKPTSPVYL 369
++L H + ++ + I KLD+L TA + G+S S L+ + T +++
Sbjct: 229 SLLSPSYYHSFGVSENYIIFLEQPFKLDILKMATAYIRGVS-WASCLAFHGEDKTH-IHI 286
Query: 370 LPRFPNKSVGVRDWRVPVEAPSQMWLLHVGNAFELKDVDGNTEIQIHACSCSYEWFNFQN 429
+ R K V + P M + H NA+E +D ++ + Y+ F N
Sbjct: 287 IDRRTRKPVPTKYHTDP------MVVFHHVNAYE-EDGCLLFDVITYEDGSLYQLFYLAN 339
Query: 430 LFGYNWQSGRLDPSIMNLKESEYQLLPHLVQVSISLDVDGNCQKCTVEPLNQWKKSSD-- 487
L ++ RL S+ LK +LP + V + +V N K + K+ D
Sbjct: 340 LNEDFKENSRLT-SMPTLKRF---VLP--LHVDKNAEVGSNLIKLSSTTARALKEKDDQV 393
Query: 488 ------------FPIINPTYSGQKTTCIYAATSLGTRRA-LPHFPFDTVVKLNVLTKSVQ 534
P IN ++GQ I+AA G + + +P + ++V S
Sbjct: 394 YCQPELLCEGLELPHINYAHNGQPYRYIFAA---GVQWSPIPKLFYSSIVA----QWSSL 446
Query: 535 TWSVGTRRFIGEPIFVPK-GV-EEDDGYLLVIEYAVSIQRC-YLIILN 579
TW + EP+FVP G +EDDG +L + Q+ +L++L+
Sbjct: 447 TWRE-EHCWPAEPLFVPTPGAKDEDDGIILSAIVSTDPQKSPFLLVLD 493
Score = 82 (33.9 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 24/80 (30%), Positives = 36/80 (45%)
Query: 71 QFLFVSQRSETTAPITLHLVDGAIPSDFPSGTYYLTGPGLFTDDHGSTVHPLDGHGYLRA 130
+ +F + E P+ V G IP+ + G GPG+ T H DG L +
Sbjct: 2 EIIFGRNKKEQLEPVRAR-VTGKIPA-WLQGILLRNGPGMHTVGETRYNHWFDGLALLHS 59
Query: 131 FEFDGVTGEVKYMAKYVKTD 150
F GEV Y +KY+++D
Sbjct: 60 FTIRD--GEVYYRSKYLRSD 77
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.428 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 614 614 0.00088 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 626 (67 KB)
Total size of DFA: 380 KB (2185 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.52u 0.08s 50.60t Elapsed: 00:00:02
Total cpu time: 50.53u 0.08s 50.61t Elapsed: 00:00:02
Start: Tue May 21 00:03:45 2013 End: Tue May 21 00:03:47 2013