Query 043706
Match_columns 586
No_of_seqs 555 out of 5871
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:51:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043706hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 5.9E-36 2E-40 304.5 16.5 260 31-295 2-310 (313)
2 3rgz_A Protein brassinosteroid 100.0 1.4E-30 4.9E-35 296.6 18.1 241 29-287 6-280 (768)
3 4fcg_A Uncharacterized protein 100.0 1.3E-30 4.3E-35 266.9 14.9 241 30-274 22-298 (328)
4 3rgz_A Protein brassinosteroid 100.0 1.5E-29 5.3E-34 288.1 16.6 212 87-300 465-750 (768)
5 4eco_A Uncharacterized protein 100.0 9.1E-30 3.1E-34 283.7 11.2 237 34-287 29-388 (636)
6 4ecn_A Leucine-rich repeat pro 100.0 1.6E-29 5.5E-34 287.6 12.8 233 33-287 267-630 (876)
7 1ozn_A Reticulon 4 receptor; N 99.9 2E-26 6.9E-31 230.8 19.0 224 69-294 14-243 (285)
8 2z66_A Variable lymphocyte rec 99.9 2.7E-26 9.3E-31 232.3 17.7 229 63-293 4-265 (306)
9 3zyi_A Leucine-rich repeat-con 99.9 1.3E-25 4.6E-30 240.0 20.1 224 68-294 56-308 (452)
10 2o6q_A Variable lymphocyte rec 99.9 5.2E-25 1.8E-29 218.8 21.3 213 64-291 3-220 (270)
11 3zyj_A Leucine-rich repeat-con 99.9 2.4E-25 8.3E-30 237.1 19.9 225 67-294 44-297 (440)
12 2z62_A TOLL-like receptor 4, v 99.9 3.5E-25 1.2E-29 220.7 17.9 221 70-293 11-241 (276)
13 2o6q_A Variable lymphocyte rec 99.9 5.5E-24 1.9E-28 211.4 21.0 211 57-270 6-222 (270)
14 2z80_A TOLL-like receptor 2, v 99.9 2.3E-24 7.9E-29 222.7 18.4 178 63-241 27-211 (353)
15 4fcg_A Uncharacterized protein 99.9 8.3E-25 2.8E-29 223.6 14.7 234 49-288 26-289 (328)
16 3m19_A Variable lymphocyte rec 99.9 2.6E-24 8.8E-29 211.4 15.2 190 65-271 4-197 (251)
17 1xku_A Decorin; proteoglycan, 99.9 2.3E-23 7.7E-28 213.1 20.5 216 64-286 29-250 (330)
18 2o6s_A Variable lymphocyte rec 99.9 3.9E-24 1.3E-28 203.8 13.4 155 63-218 4-161 (208)
19 3v47_A TOLL-like receptor 5B a 99.9 9.7E-24 3.3E-28 225.5 17.3 185 64-250 6-234 (455)
20 2ft3_A Biglycan; proteoglycan, 99.9 2.7E-23 9.3E-28 212.8 19.9 218 64-287 31-275 (332)
21 2id5_A Lingo-1, leucine rich r 99.9 1.8E-23 6.3E-28 224.9 16.8 204 67-272 12-219 (477)
22 3m19_A Variable lymphocyte rec 99.9 5.4E-23 1.8E-27 201.9 18.6 179 64-243 10-194 (251)
23 1p9a_G Platelet glycoprotein I 99.9 1.1E-22 3.8E-27 204.1 20.5 195 66-266 10-208 (290)
24 2xwt_C Thyrotropin receptor; s 99.9 2.9E-23 1E-27 202.2 15.6 212 64-284 8-234 (239)
25 1ozn_A Reticulon 4 receptor; N 99.9 3.8E-23 1.3E-27 206.9 16.6 200 70-270 36-242 (285)
26 2z81_A CD282 antigen, TOLL-lik 99.9 5E-23 1.7E-27 225.4 18.0 202 64-268 2-211 (549)
27 1p9a_G Platelet glycoprotein I 99.9 1.9E-22 6.5E-27 202.4 18.9 200 87-293 9-212 (290)
28 1ogq_A PGIP-2, polygalacturona 99.9 4.2E-24 1.4E-28 217.0 5.9 180 87-268 100-307 (313)
29 3oja_B Anopheles plasmodium-re 99.9 1.1E-22 3.7E-27 225.1 17.7 199 87-286 74-311 (597)
30 3rfs_A Internalin B, repeat mo 99.9 2.2E-22 7.4E-27 200.1 17.3 176 87-272 62-241 (272)
31 3v47_A TOLL-like receptor 5B a 99.9 1.7E-22 5.7E-27 215.9 16.8 92 87-178 78-172 (455)
32 1ziw_A TOLL-like receptor 3; i 99.9 2.9E-22 9.9E-27 225.2 18.8 184 64-248 2-191 (680)
33 1wwl_A Monocyte differentiatio 99.9 3.1E-23 1.1E-27 210.5 9.4 195 87-287 94-307 (312)
34 3o6n_A APL1; leucine-rich repe 99.9 2.7E-22 9.1E-27 210.1 16.6 197 87-286 68-282 (390)
35 3t6q_A CD180 antigen; protein- 99.9 3E-22 1E-26 221.9 17.1 157 68-225 14-173 (606)
36 2z62_A TOLL-like receptor 4, v 99.9 7.3E-22 2.5E-26 196.6 18.1 200 71-271 33-242 (276)
37 3vq2_A TLR4, TOLL-like recepto 99.9 4.3E-22 1.5E-26 220.7 15.5 202 63-267 4-218 (606)
38 2id5_A Lingo-1, leucine rich r 99.9 6E-22 2.1E-26 213.1 16.2 89 205-294 248-338 (477)
39 3rfs_A Internalin B, repeat mo 99.9 2.4E-21 8.2E-26 192.5 19.3 180 87-271 40-223 (272)
40 3t6q_A CD180 antigen; protein- 99.9 3.8E-22 1.3E-26 221.1 14.6 205 87-293 349-564 (606)
41 3j0a_A TOLL-like receptor 5; m 99.9 8.5E-22 2.9E-26 226.5 18.0 110 88-197 266-375 (844)
42 3vq2_A TLR4, TOLL-like recepto 99.9 3.7E-22 1.3E-26 221.2 14.0 207 86-295 348-564 (606)
43 1wwl_A Monocyte differentiatio 99.9 9.7E-24 3.3E-28 214.2 0.5 195 90-287 65-285 (312)
44 3oja_A Leucine-rich immune mol 99.9 2.3E-22 7.9E-27 216.6 10.8 196 89-292 35-253 (487)
45 4eco_A Uncharacterized protein 99.9 1.5E-22 5.1E-27 225.4 9.3 190 81-274 198-423 (636)
46 2z7x_B TOLL-like receptor 1, v 99.9 1.5E-21 5.3E-26 212.2 15.5 152 70-225 4-160 (520)
47 1ziw_A TOLL-like receptor 3; i 99.9 1.7E-21 6E-26 218.8 16.4 205 89-294 382-627 (680)
48 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 2.2E-21 7.4E-26 213.1 16.7 154 68-225 33-191 (562)
49 4glp_A Monocyte differentiatio 99.9 5.3E-22 1.8E-26 201.2 10.8 195 88-287 91-305 (310)
50 4ay9_X Follicle-stimulating ho 99.9 2.5E-21 8.7E-26 199.6 15.7 208 64-272 7-221 (350)
51 2ft3_A Biglycan; proteoglycan, 99.9 1.2E-20 4.2E-25 193.0 20.4 209 76-289 64-307 (332)
52 3oja_B Anopheles plasmodium-re 99.9 1.2E-20 4E-25 208.7 20.5 202 86-292 97-361 (597)
53 4g8a_A TOLL-like receptor 4; l 99.9 2.6E-21 9.1E-26 214.9 15.3 194 70-266 35-237 (635)
54 3j0a_A TOLL-like receptor 5; m 99.9 2.5E-21 8.4E-26 222.7 15.1 203 68-273 6-224 (844)
55 2z66_A Variable lymphocyte rec 99.8 1.4E-21 4.9E-26 197.5 10.9 181 87-269 77-264 (306)
56 3e6j_A Variable lymphocyte rec 99.8 1.1E-20 3.9E-25 182.6 16.6 160 62-244 15-175 (229)
57 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 3.8E-21 1.3E-25 211.2 14.0 159 133-294 350-515 (562)
58 4ecn_A Leucine-rich repeat pro 99.8 1.6E-21 5.4E-26 222.0 11.1 186 81-272 440-663 (876)
59 3cvr_A Invasion plasmid antige 99.8 2.7E-21 9.3E-26 210.5 12.3 196 55-274 33-251 (571)
60 2z7x_B TOLL-like receptor 1, v 99.8 3.8E-21 1.3E-25 209.1 13.2 201 89-294 248-486 (520)
61 2v9t_B SLIT homolog 2 protein 99.8 1.3E-20 4.3E-25 181.1 15.3 153 63-216 8-163 (220)
62 3o6n_A APL1; leucine-rich repe 99.8 2.7E-20 9.1E-25 194.8 19.1 202 86-292 91-355 (390)
63 3o53_A Protein LRIM1, AGAP0063 99.8 2E-21 6.7E-26 197.6 10.1 194 89-291 35-252 (317)
64 1xku_A Decorin; proteoglycan, 99.8 4.3E-20 1.5E-24 188.7 19.5 212 71-287 57-274 (330)
65 2z80_A TOLL-like receptor 2, v 99.8 5.5E-21 1.9E-25 197.3 11.6 221 71-293 57-318 (353)
66 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-20 8.7E-25 179.0 14.6 161 63-245 8-170 (220)
67 2o6s_A Variable lymphocyte rec 99.8 5.1E-20 1.7E-24 175.2 15.5 173 91-274 10-186 (208)
68 2z63_A TOLL-like receptor 4, v 99.8 2.9E-20 1E-24 204.2 15.2 174 69-243 10-192 (570)
69 2z63_A TOLL-like receptor 4, v 99.8 1.8E-20 6.1E-25 205.9 13.4 203 87-293 324-535 (570)
70 2z81_A CD282 antigen, TOLL-lik 99.8 1.7E-20 5.7E-25 205.3 12.8 198 88-293 310-514 (549)
71 2xot_A Amphoterin-induced prot 99.8 3E-20 1E-24 192.4 13.8 184 63-266 15-202 (361)
72 3cvr_A Invasion plasmid antige 99.8 1.3E-19 4.3E-24 197.4 18.7 175 89-288 60-242 (571)
73 3zyj_A Leucine-rich repeat-con 99.8 7E-20 2.4E-24 194.9 16.1 180 86-268 86-294 (440)
74 3zyi_A Leucine-rich repeat-con 99.8 1E-19 3.6E-24 194.2 15.5 180 86-268 97-305 (452)
75 1h6u_A Internalin H; cell adhe 99.8 1.9E-19 6.6E-24 182.1 16.4 169 88-269 41-211 (308)
76 4glp_A Monocyte differentiatio 99.8 3.8E-20 1.3E-24 187.5 8.7 177 85-267 114-308 (310)
77 3o53_A Protein LRIM1, AGAP0063 99.8 3.5E-20 1.2E-24 188.4 7.5 192 88-287 10-202 (317)
78 1h6u_A Internalin H; cell adhe 99.8 7.6E-19 2.6E-23 177.7 17.0 186 70-268 45-232 (308)
79 4g8a_A TOLL-like receptor 4; l 99.8 4.4E-19 1.5E-23 197.0 15.1 213 54-285 12-233 (635)
80 3oja_A Leucine-rich immune mol 99.8 9.7E-20 3.3E-24 196.1 9.5 173 107-287 29-202 (487)
81 4b8c_D Glucose-repressible alc 99.8 2.4E-20 8E-25 210.1 4.3 225 34-276 131-364 (727)
82 4fmz_A Internalin; leucine ric 99.8 1.9E-18 6.4E-23 177.7 18.0 198 80-286 124-343 (347)
83 3bz5_A Internalin-J, INLJ; leu 99.8 4.7E-18 1.6E-22 181.4 20.9 176 73-267 49-226 (457)
84 1o6v_A Internalin A; bacterial 99.8 2.2E-18 7.6E-23 184.6 18.2 170 88-270 199-370 (466)
85 2v70_A SLIT-2, SLIT homolog 2 99.8 2.1E-18 7.1E-23 165.6 16.1 154 92-270 15-170 (220)
86 2xwt_C Thyrotropin receptor; s 99.8 1E-18 3.5E-23 169.9 14.1 187 71-264 36-237 (239)
87 3bz5_A Internalin-J, INLJ; leu 99.8 9.1E-18 3.1E-22 179.2 22.6 184 72-274 70-254 (457)
88 1w8a_A SLIT protein; signaling 99.8 2.6E-19 8.8E-24 168.2 9.1 138 63-201 5-143 (192)
89 3g06_A SSPH2 (leucine-rich rep 99.8 1E-18 3.6E-23 192.4 14.0 198 71-287 45-295 (622)
90 2xot_A Amphoterin-induced prot 99.8 7.3E-19 2.5E-23 182.0 11.9 177 92-293 22-206 (361)
91 2v9t_B SLIT homolog 2 protein 99.8 2.5E-18 8.6E-23 165.0 14.4 128 92-222 15-145 (220)
92 1jl5_A Outer protein YOPM; leu 99.8 4.1E-19 1.4E-23 189.4 9.7 193 78-286 23-247 (454)
93 1h6t_A Internalin B; cell adhe 99.8 3.3E-18 1.1E-22 171.5 15.4 167 88-268 46-215 (291)
94 1jl5_A Outer protein YOPM; leu 99.8 2.3E-17 7.9E-22 175.9 21.9 140 112-267 131-271 (454)
95 4fmz_A Internalin; leucine ric 99.8 2.6E-17 9E-22 169.0 19.9 203 71-286 49-253 (347)
96 3e6j_A Variable lymphocyte rec 99.8 1.8E-17 6.3E-22 160.0 17.2 153 92-270 23-176 (229)
97 1o6v_A Internalin A; bacterial 99.8 1.5E-17 5E-22 178.2 18.1 188 71-269 51-259 (466)
98 2o6r_A Variable lymphocyte rec 99.7 8E-18 2.7E-22 155.7 13.7 138 63-201 4-141 (177)
99 1m9s_A Internalin B; cell inva 99.7 6.6E-18 2.3E-22 185.7 12.9 171 87-270 42-214 (605)
100 2ast_B S-phase kinase-associat 99.7 2.8E-19 9.7E-24 182.9 -0.3 175 88-264 70-258 (336)
101 1w8a_A SLIT protein; signaling 99.7 2.8E-17 9.5E-22 154.2 12.9 131 91-245 11-143 (192)
102 2ca6_A RAN GTPase-activating p 99.7 2.3E-19 7.7E-24 187.5 -2.0 201 87-287 59-314 (386)
103 2wfh_A SLIT homolog 2 protein 99.7 3.5E-17 1.2E-21 153.7 13.0 133 63-197 7-139 (193)
104 4ezg_A Putative uncharacterize 99.7 1.4E-17 4.8E-22 156.9 10.3 149 88-266 44-194 (197)
105 4aoj_A High affinity nerve gro 99.7 1.3E-17 4.5E-22 169.4 10.3 102 484-585 46-165 (329)
106 4asz_A BDNF/NT-3 growth factor 99.7 1.3E-17 4.5E-22 167.1 9.6 101 484-584 18-134 (299)
107 4ezg_A Putative uncharacterize 99.7 3.9E-17 1.3E-21 153.8 12.3 147 70-219 48-195 (197)
108 2ca6_A RAN GTPase-activating p 99.7 7.3E-19 2.5E-23 183.7 0.2 200 87-287 31-285 (386)
109 1xeu_A Internalin C; cellular 99.7 1.2E-17 4.1E-22 164.9 8.0 167 88-268 19-187 (263)
110 3goz_A Leucine-rich repeat-con 99.7 1.3E-18 4.3E-23 180.3 1.0 183 88-270 22-242 (362)
111 4gt4_A Tyrosine-protein kinase 99.7 1.6E-17 5.5E-22 167.2 8.7 101 484-584 31-151 (308)
112 4b8c_D Glucose-repressible alc 99.7 3.6E-18 1.2E-22 192.3 4.0 150 103-263 215-369 (727)
113 1h6t_A Internalin B; cell adhe 99.7 8E-17 2.8E-21 161.4 13.3 183 90-287 26-211 (291)
114 2ast_B S-phase kinase-associat 99.7 3.1E-18 1.1E-22 175.1 2.4 179 84-263 89-282 (336)
115 3goz_A Leucine-rich repeat-con 99.7 3.5E-18 1.2E-22 176.9 1.8 176 92-267 2-210 (362)
116 1m9s_A Internalin B; cell inva 99.7 6.2E-17 2.1E-21 178.0 11.2 185 89-287 22-208 (605)
117 2ell_A Acidic leucine-rich nuc 99.7 4.2E-16 1.4E-20 142.7 11.6 129 88-218 24-160 (168)
118 2ell_A Acidic leucine-rich nuc 99.6 7.1E-16 2.4E-20 141.1 11.7 136 110-268 22-162 (168)
119 3g06_A SSPH2 (leucine-rich rep 99.6 5.4E-15 1.8E-19 162.8 20.4 178 53-267 10-195 (622)
120 1xeu_A Internalin C; cellular 99.6 7E-16 2.4E-20 152.2 11.8 146 87-243 40-187 (263)
121 2je0_A Acidic leucine-rich nuc 99.6 4.1E-16 1.4E-20 139.7 8.6 124 88-213 17-148 (149)
122 1dce_A Protein (RAB geranylger 99.6 7.3E-19 2.5E-23 192.1 -12.0 177 88-272 349-552 (567)
123 4ay9_X Follicle-stimulating ho 99.6 2.2E-15 7.7E-20 155.0 13.9 191 92-287 13-213 (350)
124 2je0_A Acidic leucine-rich nuc 99.6 1.4E-15 4.7E-20 136.2 9.4 129 111-262 16-149 (149)
125 3omv_A RAF proto-oncogene seri 99.6 1.1E-15 3.9E-20 153.2 9.6 96 484-584 41-138 (307)
126 3hmm_A TGF-beta receptor type- 99.6 1.3E-15 4.6E-20 153.2 9.8 95 484-584 8-106 (303)
127 2wfh_A SLIT homolog 2 protein 99.6 7.3E-15 2.5E-19 137.7 13.7 106 92-201 14-119 (193)
128 2o6r_A Variable lymphocyte rec 99.6 9E-15 3.1E-19 135.0 13.8 131 91-245 10-141 (177)
129 4b9d_A Serine/threonine-protei 99.6 2.6E-15 9E-20 152.9 10.8 99 484-583 29-130 (350)
130 1z7x_W Ribonuclease inhibitor; 99.6 5.5E-17 1.9E-21 173.3 -2.6 201 87-287 169-409 (461)
131 3fpq_A Serine/threonine-protei 99.6 3.5E-15 1.2E-19 148.5 10.6 97 485-584 32-135 (290)
132 4fih_A Serine/threonine-protei 99.6 3.1E-15 1.1E-19 152.1 8.4 95 485-583 80-175 (346)
133 1z7x_W Ribonuclease inhibitor; 99.6 5E-17 1.7E-21 173.6 -5.0 199 88-287 142-381 (461)
134 3g39_A Variable lymphocyte rec 99.6 2.1E-14 7.1E-19 131.7 12.2 88 112-199 30-117 (170)
135 4fie_A Serine/threonine-protei 99.5 1E-14 3.5E-19 152.1 9.1 95 485-583 157-252 (423)
136 4g31_A Eukaryotic translation 99.5 2.8E-14 9.6E-19 143.0 10.7 98 484-581 10-121 (299)
137 4aw0_A HPDK1, 3-phosphoinositi 99.5 1.5E-14 5.1E-19 144.9 8.5 86 484-569 37-126 (311)
138 1dce_A Protein (RAB geranylger 99.5 4.3E-14 1.5E-18 154.4 12.4 118 113-235 442-567 (567)
139 4g3f_A NF-kappa-beta-inducing 99.5 1.4E-14 4.8E-19 146.8 7.4 93 484-584 63-156 (336)
140 3g39_A Variable lymphocyte rec 99.5 1.1E-13 3.6E-18 126.9 12.3 112 63-175 6-117 (170)
141 4ase_A Vascular endothelial gr 99.5 2.1E-14 7.2E-19 147.1 8.3 101 484-584 69-191 (353)
142 1a9n_A U2A', U2A'; complex (nu 99.5 2.9E-14 9.9E-19 131.5 8.3 133 108-266 15-153 (176)
143 1ds9_A Outer arm dynein; leuci 99.5 8.7E-17 3E-21 151.5 -9.2 150 89-266 19-185 (198)
144 1a9n_A U2A', U2A'; complex (nu 99.5 4.4E-14 1.5E-18 130.3 8.4 125 87-217 18-152 (176)
145 2r9u_A Variable lymphocyte rec 99.5 1.7E-13 6E-18 126.0 12.3 104 92-198 16-119 (174)
146 2r9u_A Variable lymphocyte rec 99.5 2.2E-13 7.6E-18 125.3 11.8 111 64-175 10-120 (174)
147 1ds9_A Outer arm dynein; leuci 99.5 1.2E-16 4.3E-21 150.5 -10.5 111 87-202 47-158 (198)
148 3hyh_A Carbon catabolite-derep 99.5 1E-13 3.5E-18 136.7 9.2 96 484-583 18-117 (275)
149 3ubd_A Ribosomal protein S6 ki 99.4 3.7E-14 1.3E-18 141.9 3.3 96 484-582 29-130 (304)
150 2ifg_A High affinity nerve gro 99.4 6.7E-13 2.3E-17 136.1 12.0 108 65-197 7-116 (347)
151 3uto_A Twitchin; kinase, muscl 99.4 7.5E-13 2.6E-17 144.6 10.8 95 484-580 162-257 (573)
152 3s95_A LIMK-1, LIM domain kina 99.4 2.6E-12 8.9E-17 129.5 11.6 99 484-584 15-114 (310)
153 2c30_A Serine/threonine-protei 99.3 2.9E-12 9.9E-17 130.0 11.0 96 485-584 51-147 (321)
154 2ifg_A High affinity nerve gro 99.3 3.3E-12 1.1E-16 131.0 10.9 103 115-219 11-117 (347)
155 4b99_A Mitogen-activated prote 99.3 2E-12 6.8E-17 134.7 9.2 96 484-583 59-163 (398)
156 2qkw_B Protein kinase; three-h 99.3 1.1E-12 3.7E-17 133.0 6.6 101 484-584 44-145 (321)
157 3uim_A Brassinosteroid insensi 99.3 1.7E-12 5.8E-17 131.8 7.7 114 471-584 17-137 (326)
158 2nru_A Interleukin-1 receptor- 99.3 6.6E-12 2.3E-16 126.2 10.8 112 472-584 13-139 (307)
159 2x4f_A Myosin light chain kina 99.3 3.5E-12 1.2E-16 132.2 8.8 98 484-583 94-192 (373)
160 4hcu_A Tyrosine-protein kinase 99.3 8.9E-12 3E-16 122.7 10.2 97 484-583 15-111 (269)
161 3qd2_B Eukaryotic translation 99.3 1.1E-11 3.8E-16 125.7 11.1 99 484-582 11-168 (332)
162 3p86_A Serine/threonine-protei 99.3 5.4E-12 1.8E-16 127.3 8.4 100 484-584 42-143 (309)
163 3fxz_A Serine/threonine-protei 99.3 1.1E-11 3.9E-16 124.1 10.8 96 484-583 25-121 (297)
164 2qol_A Ephrin receptor; recept 99.3 5.7E-12 1.9E-16 130.7 8.8 99 484-584 50-153 (373)
165 3ogk_B Coronatine-insensitive 99.3 1.4E-13 4.9E-18 151.6 -4.2 180 87-266 292-501 (592)
166 3kul_A Ephrin type-A receptor 99.3 9.6E-12 3.3E-16 126.4 9.3 99 484-584 54-157 (325)
167 4euu_A Serine/threonine-protei 99.3 1.7E-11 5.7E-16 124.1 11.1 101 484-584 14-118 (319)
168 3un9_A NLR family member X1; l 99.2 6.4E-14 2.2E-18 145.0 -7.2 110 88-197 72-196 (372)
169 3fe3_A MAP/microtubule affinit 99.2 1.9E-11 6.5E-16 124.4 11.0 86 484-569 20-108 (328)
170 3un9_A NLR family member X1; l 99.2 1.7E-13 5.7E-18 141.9 -4.3 157 111-268 71-254 (372)
171 2clq_A Mitogen-activated prote 99.2 1.7E-11 5.8E-16 122.3 10.5 99 484-582 27-126 (295)
172 3kmu_A ILK, integrin-linked ki 99.2 6.2E-12 2.1E-16 123.7 7.1 99 484-584 15-117 (271)
173 3c0i_A Peripheral plasma membr 99.2 1.4E-11 4.8E-16 126.6 10.1 100 484-583 29-135 (351)
174 3sb4_A Hypothetical leucine ri 99.2 1.5E-11 5E-16 125.2 9.9 183 88-274 49-318 (329)
175 1opk_A P150, C-ABL, proto-onco 99.2 7.6E-12 2.6E-16 134.7 8.1 99 484-584 225-324 (495)
176 3ogk_B Coronatine-insensitive 99.2 5.5E-13 1.9E-17 146.8 -1.2 56 205-261 293-350 (592)
177 3sxs_A Cytoplasmic tyrosine-pr 99.2 1.5E-11 5E-16 121.0 9.2 98 484-584 13-110 (268)
178 3ugc_A Tyrosine-protein kinase 99.2 1.1E-11 3.7E-16 123.9 8.2 99 484-584 15-120 (295)
179 3cbl_A C-FES, proto-oncogene t 99.2 6.8E-12 2.3E-16 130.3 6.7 98 484-583 119-218 (377)
180 1k9a_A Carboxyl-terminal SRC k 99.2 1.9E-11 6.5E-16 130.0 10.3 97 484-584 198-295 (450)
181 2y0a_A Death-associated protei 99.2 2.9E-11 9.9E-16 122.8 11.3 98 484-584 16-120 (326)
182 2psq_A Fibroblast growth facto 99.2 1.6E-11 5.6E-16 127.0 9.4 86 484-569 86-181 (370)
183 2yab_A Death-associated protei 99.2 2.4E-11 8.1E-16 125.3 10.5 97 484-583 17-120 (361)
184 3f3z_A Calcium/calmodulin-depe 99.2 2.8E-11 9.4E-16 119.7 10.5 97 484-583 14-111 (277)
185 3gen_A Tyrosine-protein kinase 99.2 2E-11 6.8E-16 121.1 9.4 98 484-584 29-126 (283)
186 3zgw_A Maternal embryonic leuc 99.2 1.9E-11 6.6E-16 125.2 9.4 97 484-583 15-113 (347)
187 1tki_A Titin; serine kinase, m 99.2 3.9E-11 1.3E-15 121.6 11.5 97 484-583 10-107 (321)
188 4fvq_A Tyrosine-protein kinase 99.2 2E-11 6.9E-16 121.4 9.2 98 484-583 13-118 (289)
189 1qcf_A Haematopoetic cell kina 99.2 1.1E-11 3.7E-16 132.1 7.6 97 484-583 193-289 (454)
190 2ac3_A MAP kinase-interacting 99.2 3.5E-11 1.2E-15 121.3 10.9 96 484-582 18-115 (316)
191 4eqm_A Protein kinase; transfe 99.2 3.1E-11 1.1E-15 120.7 10.3 98 484-584 16-117 (294)
192 3kn6_A Ribosomal protein S6 ki 99.2 3.3E-11 1.1E-15 122.4 10.6 95 484-584 16-112 (325)
193 2bdw_A Hypothetical protein K1 99.2 3.6E-11 1.2E-15 124.1 11.0 97 484-583 34-133 (362)
194 1kob_A Twitchin; kinase, intra 99.2 3.1E-11 1.1E-15 125.6 10.5 99 484-584 56-155 (387)
195 3v5w_A G-protein coupled recep 99.2 2.8E-11 9.7E-16 132.2 10.3 86 484-569 194-286 (689)
196 4aw2_A Serine/threonine-protei 99.2 2E-11 6.9E-16 128.9 8.9 98 484-583 79-180 (437)
197 1fmk_A C-SRC, P60-SRC, tyrosin 99.2 1.4E-11 4.6E-16 131.2 7.5 98 484-584 189-286 (452)
198 4eut_A Serine/threonine-protei 99.2 3E-11 1E-15 126.3 9.7 101 484-584 14-118 (396)
199 1luf_A Muscle-specific tyrosin 99.2 3.1E-11 1E-15 123.3 9.6 86 484-569 52-144 (343)
200 3gni_B Strad alpha; kinase fol 99.2 5.5E-11 1.9E-15 123.8 11.7 100 484-584 30-134 (389)
201 3t9t_A Tyrosine-protein kinase 99.2 3.2E-11 1.1E-15 118.4 9.3 98 484-584 13-110 (267)
202 3is5_A Calcium-dependent prote 99.2 3.3E-11 1.1E-15 119.8 9.5 100 484-583 27-129 (285)
203 3soc_A Activin receptor type-2 99.2 2.7E-11 9.2E-16 122.8 8.9 95 484-584 29-127 (322)
204 2buj_A Serine/threonine-protei 99.2 3.9E-11 1.3E-15 121.1 9.8 101 484-584 34-140 (317)
205 3uc3_A Serine/threonine-protei 99.2 4.1E-11 1.4E-15 123.6 10.0 96 484-583 25-121 (361)
206 1o6l_A RAC-beta serine/threoni 99.2 4.7E-11 1.6E-15 121.9 10.2 86 484-569 10-99 (337)
207 2h8h_A Proto-oncogene tyrosine 99.2 1.7E-11 5.7E-16 133.3 7.1 98 484-584 272-369 (535)
208 3l9p_A Anaplastic lymphoma kin 99.2 2.7E-11 9.3E-16 125.2 8.1 101 484-584 76-187 (367)
209 4f9c_A Cell division cycle 7-r 99.2 6.2E-11 2.1E-15 121.9 10.6 82 484-567 26-112 (361)
210 1x8b_A WEE1HU, WEE1-like prote 99.2 5.6E-11 1.9E-15 117.8 9.9 101 484-584 16-121 (289)
211 2jam_A Calcium/calmodulin-depe 99.2 6.5E-11 2.2E-15 118.8 10.4 97 484-583 14-111 (304)
212 2w4o_A Calcium/calmodulin-depe 99.2 4.1E-11 1.4E-15 123.0 9.0 95 484-583 58-153 (349)
213 3uqc_A Probable conserved tran 99.2 7.9E-11 2.7E-15 117.3 10.9 84 485-568 37-124 (286)
214 3bhy_A Death-associated protei 99.2 8.4E-11 2.9E-15 116.5 10.9 98 484-584 10-114 (283)
215 3tki_A Serine/threonine-protei 99.2 2.7E-11 9.4E-16 122.9 7.5 98 484-584 12-111 (323)
216 3vhe_A Vascular endothelial gr 99.2 2.8E-11 9.6E-16 124.4 7.7 86 484-569 27-121 (359)
217 3lxl_A Tyrosine-protein kinase 99.2 6.6E-11 2.3E-15 120.1 10.4 99 484-584 28-133 (327)
218 3kfa_A Tyrosine-protein kinase 99.2 3.6E-11 1.2E-15 119.5 8.2 99 484-584 18-117 (288)
219 1fot_A TPK1 delta, CAMP-depend 99.2 6.1E-11 2.1E-15 120.0 9.9 95 484-581 11-109 (318)
220 4e5w_A Tyrosine-protein kinase 99.2 8.1E-11 2.8E-15 117.8 10.3 99 484-584 26-132 (302)
221 3lxp_A Non-receptor tyrosine-p 99.2 1.2E-10 4.1E-15 117.7 11.6 97 484-584 36-140 (318)
222 1t46_A HOMO sapiens V-KIT hard 99.2 5.2E-11 1.8E-15 119.8 8.8 101 484-584 28-151 (313)
223 2a2a_A Death-associated protei 99.2 9E-11 3.1E-15 118.8 10.6 97 484-583 17-120 (321)
224 2j7t_A Serine/threonine-protei 99.2 6.4E-11 2.2E-15 118.5 9.4 98 484-583 24-122 (302)
225 2pvf_A Fibroblast growth facto 99.2 6.4E-11 2.2E-15 120.6 9.5 101 484-584 40-163 (334)
226 2ozo_A Tyrosine-protein kinase 99.2 5.3E-11 1.8E-15 131.4 9.5 96 486-584 343-442 (613)
227 1u59_A Tyrosine-protein kinase 99.1 1E-10 3.4E-15 116.4 10.6 97 485-584 16-116 (287)
228 2w5a_A Serine/threonine-protei 99.1 8E-11 2.8E-15 116.4 9.8 101 484-584 11-117 (279)
229 3tt0_A Basic fibroblast growth 99.1 6.7E-11 2.3E-15 122.9 9.6 101 484-584 74-197 (382)
230 2ivs_A Proto-oncogene tyrosine 99.1 5E-11 1.7E-15 120.0 8.4 86 484-569 28-120 (314)
231 3a62_A Ribosomal protein S6 ki 99.1 5.5E-11 1.9E-15 120.9 8.7 86 484-569 22-115 (327)
232 4fr4_A YANK1, serine/threonine 99.1 6.1E-11 2.1E-15 123.1 9.2 97 484-583 20-120 (384)
233 2wqm_A Serine/threonine-protei 99.1 1.2E-10 4E-15 117.2 11.0 100 484-583 37-141 (310)
234 4fl3_A Tyrosine-protein kinase 99.1 6.9E-11 2.4E-15 130.9 10.2 97 484-584 374-475 (635)
235 2eva_A TAK1 kinase - TAB1 chim 99.1 3.7E-11 1.3E-15 120.9 7.3 95 484-583 13-107 (307)
236 3eqc_A Dual specificity mitoge 99.1 7.5E-11 2.5E-15 121.4 9.7 97 484-583 38-136 (360)
237 2rku_A Serine/threonine-protei 99.1 1.2E-10 4.2E-15 116.1 11.0 98 484-584 20-121 (294)
238 3a8x_A Protein kinase C IOTA t 99.1 1.1E-10 3.7E-15 119.6 10.8 96 484-582 14-114 (345)
239 3txo_A PKC-L, NPKC-ETA, protei 99.1 8.6E-11 2.9E-15 120.7 10.0 97 484-583 28-129 (353)
240 3soa_A Calcium/calmodulin-depe 99.1 7.6E-11 2.6E-15 124.9 9.8 97 484-583 16-115 (444)
241 3kk8_A Calcium/calmodulin depe 99.1 1.2E-10 4.2E-15 115.4 10.7 97 484-583 11-110 (284)
242 1rjb_A FL cytokine receptor; k 99.1 5.4E-11 1.9E-15 121.6 8.4 86 484-569 50-143 (344)
243 3v8s_A RHO-associated protein 99.1 3.7E-11 1.3E-15 125.9 7.3 86 484-569 74-163 (410)
244 2acx_A G protein-coupled recep 99.1 8.4E-11 2.9E-15 127.7 10.2 99 484-583 189-291 (576)
245 2vd5_A DMPK protein; serine/th 99.1 5.2E-11 1.8E-15 124.8 8.3 97 484-582 66-166 (412)
246 1xjd_A Protein kinase C, theta 99.1 7.7E-11 2.6E-15 120.6 9.4 97 484-583 22-123 (345)
247 2w1i_A JAK2; chromosomal rearr 99.1 8.8E-11 3E-15 119.2 9.7 99 484-584 46-151 (326)
248 1qpc_A LCK kinase; alpha beta 99.1 5E-11 1.7E-15 118.0 7.4 98 484-584 18-115 (279)
249 1rdq_E PKA C-alpha, CAMP-depen 99.1 9.3E-11 3.2E-15 120.3 9.5 95 484-581 46-144 (350)
250 1t4h_A Serine/threonine-protei 99.1 1.4E-10 4.9E-15 115.4 10.7 97 484-583 31-134 (290)
251 2owb_A Serine/threonine-protei 99.1 1.4E-10 4.9E-15 118.1 10.8 97 484-583 46-146 (335)
252 3cok_A Serine/threonine-protei 99.1 9.5E-11 3.2E-15 115.9 9.1 99 484-584 16-118 (278)
253 3e7e_A HBUB1, BUB1A, mitotic c 99.1 9.4E-11 3.2E-15 121.0 9.5 98 484-584 70-178 (365)
254 3q5i_A Protein kinase; CDPK, m 99.1 1.3E-10 4.3E-15 125.5 10.8 98 484-584 41-152 (504)
255 1u5q_A Serine/threonine protei 99.1 1.6E-10 5.4E-15 118.6 10.9 98 484-584 59-160 (348)
256 3dtc_A Mitogen-activated prote 99.1 7.6E-11 2.6E-15 116.0 8.2 95 484-583 12-110 (271)
257 1phk_A Phosphorylase kinase; g 99.1 1.7E-10 5.7E-15 115.3 10.6 97 484-583 22-129 (298)
258 3hko_A Calcium/calmodulin-depe 99.1 1.5E-10 5E-15 118.3 10.4 84 484-567 31-120 (345)
259 3niz_A Rhodanese family protei 99.1 1.2E-10 4.2E-15 117.3 9.5 97 484-583 26-124 (311)
260 1mqb_A Ephrin type-A receptor 99.1 1.1E-10 3.8E-15 118.9 9.1 99 484-584 49-153 (333)
261 4dc2_A Protein kinase C IOTA t 99.1 1E-10 3.4E-15 122.0 8.9 96 484-582 57-157 (396)
262 3sb4_A Hypothetical leucine ri 99.1 1.3E-10 4.6E-15 118.1 9.6 194 88-286 25-307 (329)
263 3c4z_A Rhodopsin kinase; Ser/T 99.1 1.5E-10 5.3E-15 125.2 10.5 99 485-583 191-294 (543)
264 3lij_A Calcium/calmodulin depe 99.1 1.2E-10 4.1E-15 125.4 9.6 97 484-583 42-141 (494)
265 3ork_A Serine/threonine protei 99.1 4.1E-11 1.4E-15 120.7 5.6 97 484-583 17-121 (311)
266 4agu_A Cyclin-dependent kinase 99.1 1.9E-10 6.4E-15 115.7 10.4 97 484-583 8-107 (311)
267 3a7i_A MST3 kinase, serine/thr 99.1 2E-10 6.9E-15 115.1 10.5 96 484-583 27-124 (303)
268 2h6d_A 5'-AMP-activated protei 99.1 2E-10 6.7E-15 113.4 10.2 97 484-583 16-116 (276)
269 3mwu_A Calmodulin-domain prote 99.1 1.4E-10 4.9E-15 124.5 10.0 97 484-583 27-126 (486)
270 3fdn_A Serine/threonine-protei 99.1 1.3E-10 4.4E-15 115.0 8.9 97 484-583 14-114 (279)
271 2h34_A Serine/threonine-protei 99.1 2.3E-10 7.8E-15 115.2 10.8 98 484-584 39-140 (309)
272 2y94_A 5'-AMP-activated protei 99.1 1E-10 3.4E-15 124.9 8.5 97 484-583 21-121 (476)
273 3h4j_B AMPK kdaid, SNF1-like p 99.1 9E-11 3.1E-15 119.7 7.7 96 484-583 14-113 (336)
274 3pls_A Macrophage-stimulating 99.1 1.7E-10 5.8E-15 115.1 9.6 99 484-584 26-130 (298)
275 3gxj_A TGF-beta receptor type- 99.1 1.4E-10 4.9E-15 115.9 9.0 82 484-569 8-95 (303)
276 3qup_A Tyrosine-protein kinase 99.1 1.2E-10 4E-15 117.9 8.4 101 484-584 28-143 (323)
277 2yfx_A Tyrosine-protein kinase 99.1 1.1E-10 3.8E-15 118.4 8.3 101 484-584 35-146 (327)
278 3nyv_A Calmodulin-domain prote 99.1 1.8E-10 6E-15 123.7 10.2 98 484-584 31-132 (484)
279 2yex_A Serine/threonine-protei 99.1 1.7E-10 5.9E-15 113.7 9.4 97 484-583 12-110 (276)
280 3p1a_A MYT1 kinase, membrane-a 99.1 2.7E-10 9.2E-15 114.8 10.9 98 484-584 62-163 (311)
281 4ejn_A RAC-alpha serine/threon 99.1 5.8E-11 2E-15 126.1 6.3 97 484-583 153-253 (446)
282 2a19_B Interferon-induced, dou 99.1 1.3E-10 4.6E-15 115.0 8.4 96 484-584 16-128 (284)
283 1mp8_A Focal adhesion kinase 1 99.1 1.9E-10 6.4E-15 114.0 9.4 98 484-584 20-122 (281)
284 2zv2_A Calcium/calmodulin-depe 99.1 8.9E-11 3E-15 117.4 6.8 96 484-583 18-142 (298)
285 3poz_A Epidermal growth factor 99.1 1.7E-10 5.8E-15 117.2 9.0 98 484-584 20-123 (327)
286 2pml_X PFPK7, Ser/Thr protein 99.1 5.2E-11 1.8E-15 121.8 5.1 99 484-584 36-157 (348)
287 4f0f_A Serine/threonine-protei 99.1 1.3E-10 4.6E-15 115.3 7.9 97 484-584 24-128 (287)
288 1xbb_A Tyrosine-protein kinase 99.1 2.2E-10 7.7E-15 114.1 9.5 95 485-583 23-122 (291)
289 2wei_A Calmodulin-domain prote 99.1 3.1E-10 1.1E-14 112.8 10.5 97 484-583 27-126 (287)
290 2pmi_A Negative RE, cyclin-dep 99.1 1.5E-10 5.2E-15 117.0 8.2 99 484-583 10-113 (317)
291 3i6u_A CDS1, serine/threonine- 99.1 1.2E-10 4E-15 122.7 7.6 96 484-583 140-244 (419)
292 1zy4_A Serine/threonine-protei 99.1 2.3E-10 7.9E-15 114.2 9.4 95 484-581 11-119 (303)
293 2qr7_A Ribosomal protein S6 ki 99.1 2E-10 6.8E-15 117.5 9.1 93 484-583 27-121 (342)
294 1p4o_A Insulin-like growth fac 99.1 7.7E-11 2.6E-15 119.2 5.9 100 484-583 30-143 (322)
295 2vgo_A Serine/threonine-protei 99.1 2.3E-10 7.7E-15 113.5 9.1 97 484-583 19-119 (284)
296 2y7j_A Phosphorylase B kinase 99.1 3.6E-10 1.2E-14 116.6 10.8 97 484-583 99-205 (365)
297 1fvr_A Tyrosine-protein kinase 99.1 2.4E-10 8.3E-15 115.9 9.3 101 484-584 30-148 (327)
298 2i1m_A Macrophage colony-stimu 99.1 1.5E-10 5.1E-15 117.7 7.7 86 484-569 51-144 (333)
299 3c1x_A Hepatocyte growth facto 99.1 1.1E-10 3.7E-15 121.0 6.7 98 484-583 94-197 (373)
300 3q4u_A Activin receptor type-1 99.1 3.4E-10 1.2E-14 113.1 10.0 93 484-584 13-111 (301)
301 3f66_A Hepatocyte growth facto 99.1 2.4E-10 8.2E-15 114.1 8.9 99 484-584 30-134 (298)
302 3lm5_A Serine/threonine-protei 99.1 2.2E-10 7.4E-15 116.4 8.7 100 484-584 34-137 (327)
303 2p1m_B Transport inhibitor res 99.1 3.8E-12 1.3E-16 140.1 -4.8 181 87-269 288-497 (594)
304 1ob3_A PFPK5, cell division co 99.1 2E-10 7E-15 114.2 8.3 96 485-583 8-105 (288)
305 2i0e_A Protein kinase C-beta I 99.1 2.1E-10 7.2E-15 117.8 8.2 96 484-582 25-125 (353)
306 4aaa_A Cyclin-dependent kinase 99.1 2.9E-10 1E-14 115.5 9.2 98 484-584 30-130 (331)
307 2xir_A Vascular endothelial gr 99.1 2.5E-10 8.6E-15 114.9 8.6 86 484-569 32-126 (316)
308 3o0g_A Cell division protein k 99.0 3.8E-10 1.3E-14 112.5 9.7 97 484-583 7-106 (292)
309 3com_A Serine/threonine-protei 99.0 4.8E-10 1.6E-14 112.9 10.5 96 484-583 34-130 (314)
310 3brb_A Proto-oncogene tyrosine 99.0 3.1E-10 1.1E-14 114.2 9.1 101 484-584 39-153 (313)
311 3ll6_A Cyclin G-associated kin 99.0 2.3E-10 7.7E-15 116.2 7.9 100 484-584 33-142 (337)
312 2eue_A Carbon catabolite derep 99.0 3.7E-10 1.3E-14 111.4 9.2 97 484-584 18-118 (275)
313 1nxk_A MAP kinase-activated pr 99.0 2.6E-10 8.9E-15 119.2 8.4 94 485-584 68-167 (400)
314 3gbz_A Kinase, CMGC CDK; ssgci 99.0 2.6E-10 8.8E-15 115.9 8.1 96 484-583 39-137 (329)
315 2vwi_A Serine/threonine-protei 99.0 1.1E-10 3.8E-15 116.7 5.1 101 484-584 20-127 (303)
316 2ycf_A Serine/threonine-protei 99.0 3.5E-10 1.2E-14 114.4 8.5 95 484-582 15-118 (322)
317 3m2w_A MAP kinase-activated pr 99.0 4.9E-10 1.7E-14 112.1 9.3 95 484-584 23-123 (299)
318 2izr_A Casein kinase I isoform 99.0 3.1E-10 1.1E-14 115.3 7.9 96 484-584 14-111 (330)
319 1b6c_B TGF-B superfamily recep 99.0 6.6E-10 2.3E-14 113.2 10.3 93 484-584 47-145 (342)
320 2x7f_A TRAF2 and NCK-interacti 99.0 5.7E-10 1.9E-14 113.0 9.7 96 484-581 29-132 (326)
321 1vzo_A Ribosomal protein S6 ki 99.0 2.4E-10 8.2E-15 117.5 6.6 97 484-583 59-164 (355)
322 3llt_A Serine/threonine kinase 99.0 8.2E-10 2.8E-14 113.5 10.6 97 484-583 40-142 (360)
323 3dbq_A Dual specificity protei 99.0 6.4E-10 2.2E-14 113.7 9.7 96 484-583 14-113 (343)
324 1byg_A CSK, protein (C-termina 99.0 1.8E-10 6.1E-15 113.9 5.3 96 484-583 26-122 (278)
325 3cc6_A Protein tyrosine kinase 99.0 5.8E-10 2E-14 110.4 8.9 97 484-583 17-118 (281)
326 2i6l_A Mitogen-activated prote 99.0 5.4E-10 1.8E-14 112.6 8.7 95 484-583 16-125 (320)
327 2p1m_B Transport inhibitor res 99.0 3.9E-11 1.4E-15 132.0 0.3 175 88-263 105-324 (594)
328 2r5t_A Serine/threonine-protei 99.0 3.1E-10 1.1E-14 117.4 7.0 86 484-569 43-133 (373)
329 2r3i_A Cell division protein k 99.0 6.5E-10 2.2E-14 111.0 9.0 98 484-583 8-108 (299)
330 3lb7_A RAF proto-oncogene seri 99.0 6.8E-10 2.3E-14 111.7 8.9 96 484-584 41-138 (307)
331 3dls_A PAS domain-containing s 99.0 2.2E-10 7.6E-15 116.8 5.3 97 484-583 29-135 (335)
332 2zmd_A Dual specificity protei 99.0 9.5E-10 3.2E-14 114.5 10.1 96 484-583 61-160 (390)
333 3an0_A Dual specificity mitoge 99.0 6.8E-10 2.3E-14 113.2 8.8 100 484-584 56-159 (340)
334 3mdy_A Bone morphogenetic prot 99.0 1E-09 3.4E-14 111.5 10.0 92 484-583 42-139 (337)
335 2wtk_C Serine/threonine-protei 99.0 7.4E-10 2.5E-14 110.9 8.7 99 484-584 10-115 (305)
336 3fme_A Dual specificity mitoge 99.0 7.6E-10 2.6E-14 109.9 8.6 100 484-584 12-115 (290)
337 3og7_A AKAP9-BRAF fusion prote 99.0 5.8E-10 2E-14 111.0 7.7 96 484-584 29-126 (289)
338 3kex_A Receptor tyrosine-prote 99.0 2.2E-10 7.4E-15 116.2 4.6 98 484-584 18-121 (325)
339 2pzi_A Probable serine/threoni 99.0 3.2E-10 1.1E-14 126.9 6.2 96 484-584 85-188 (681)
340 3pg1_A Mitogen-activated prote 99.0 5.9E-10 2E-14 114.7 7.6 98 484-584 27-140 (362)
341 2j0j_A Focal adhesion kinase 1 99.0 1E-09 3.5E-14 122.0 9.9 98 484-584 395-497 (656)
342 3n9x_A Phosphotransferase; mal 99.0 9.7E-10 3.3E-14 116.1 8.9 97 484-584 31-135 (432)
343 2ra8_A Uncharacterized protein 99.0 2E-10 6.7E-15 118.0 3.4 177 88-267 107-321 (362)
344 3rgf_A Cyclin-dependent kinase 99.0 9.9E-10 3.4E-14 115.0 8.7 106 476-584 18-134 (405)
345 3mtl_A Cell division protein k 98.9 3.6E-10 1.2E-14 114.6 4.8 97 484-583 7-105 (324)
346 3byv_A Rhoptry kinase; malaria 98.9 2.2E-10 7.6E-15 118.8 3.3 100 484-584 78-212 (377)
347 3lzb_A Epidermal growth factor 98.9 1.3E-09 4.5E-14 110.6 8.5 98 484-584 20-123 (327)
348 3nsz_A CK II alpha, casein kin 98.9 2.9E-09 9.8E-14 107.9 10.9 82 484-568 41-126 (330)
349 3fhr_A MAP kinase-activated pr 98.9 1.9E-09 6.5E-14 109.8 9.4 96 484-584 34-134 (336)
350 4fdw_A Leucine rich hypothetic 98.9 9.2E-09 3.2E-13 107.2 14.7 166 89-261 136-308 (401)
351 1ua2_A CAK, cell division prot 98.9 7.8E-10 2.7E-14 113.2 6.4 96 484-582 15-116 (346)
352 3rp9_A Mitogen-activated prote 98.9 1.1E-09 3.6E-14 116.8 7.4 96 484-583 58-161 (458)
353 3eb0_A Putative uncharacterize 98.9 1E-09 3.5E-14 114.0 6.9 95 484-583 12-146 (383)
354 1csn_A Casein kinase-1; phosph 98.9 2.6E-09 8.9E-14 106.4 9.4 96 484-584 15-112 (298)
355 2b9h_A MAP kinase FUS3, mitoge 98.9 2.3E-09 8E-14 109.7 8.9 95 484-583 16-117 (353)
356 3qa8_A MGC80376 protein; kinas 98.9 2.2E-10 7.7E-15 125.9 1.3 100 484-583 19-126 (676)
357 2vuw_A Serine/threonine-protei 98.9 1.6E-10 5.5E-15 117.8 0.1 95 484-583 25-166 (336)
358 1u46_A ACK-1, activated CDC42 98.9 1.7E-09 6E-14 107.3 7.7 97 484-583 23-126 (291)
359 3g33_A Cell division protein k 98.9 2.7E-09 9.3E-14 107.1 9.0 99 484-584 14-126 (308)
360 2jii_A Serine/threonine-protei 98.9 8.8E-10 3E-14 113.0 5.4 94 484-584 47-165 (352)
361 1cm8_A Phosphorylated MAP kina 98.9 1.4E-09 4.9E-14 112.2 6.9 85 484-569 30-123 (367)
362 3pfq_A PKC-B, PKC-beta, protei 98.9 1.5E-09 5.2E-14 120.9 7.5 97 484-583 346-447 (674)
363 3mi9_A Cell division protein k 98.9 2.6E-09 9E-14 109.3 8.7 98 484-584 22-130 (351)
364 3cek_A Dual specificity protei 98.9 3.4E-09 1.2E-13 106.6 9.3 96 484-583 33-132 (313)
365 2xrw_A Mitogen-activated prote 98.9 3.5E-09 1.2E-13 109.4 9.6 84 484-568 30-122 (371)
366 3qyz_A Mitogen-activated prote 98.9 3.3E-09 1.1E-13 109.3 9.2 95 484-583 32-133 (364)
367 2iwi_A Serine/threonine-protei 98.9 7.2E-10 2.5E-14 111.5 4.1 98 484-584 36-145 (312)
368 3ttj_A Mitogen-activated prote 98.9 2.2E-09 7.6E-14 114.4 8.0 93 484-582 67-168 (464)
369 3oz6_A Mitogen-activated prote 98.9 3.3E-09 1.1E-13 110.3 9.1 85 484-569 14-104 (388)
370 3aln_A Dual specificity mitoge 98.9 6.1E-09 2.1E-13 105.5 10.7 99 484-583 27-130 (327)
371 3op5_A Serine/threonine-protei 98.9 2.3E-09 8E-14 110.4 7.7 98 484-584 40-158 (364)
372 3kvw_A DYRK2, dual specificity 98.9 6.3E-09 2.1E-13 109.8 10.7 98 484-584 102-206 (429)
373 4exu_A Mitogen-activated prote 98.9 3E-09 1E-13 109.9 8.1 94 484-583 47-149 (371)
374 3g2f_A Bone morphogenetic prot 98.9 4.1E-09 1.4E-13 107.1 8.8 92 484-583 18-116 (336)
375 2v62_A Serine/threonine-protei 98.9 1.5E-09 5.2E-14 111.0 5.5 97 484-584 42-157 (345)
376 1blx_A Cyclin-dependent kinase 98.8 2.8E-09 9.6E-14 107.7 7.1 98 484-583 16-125 (326)
377 2rio_A Serine/threonine-protei 98.8 6.8E-09 2.3E-13 109.7 9.6 82 484-569 20-102 (434)
378 4fdw_A Leucine rich hypothetic 98.8 2.4E-08 8.3E-13 104.0 13.6 191 88-287 157-356 (401)
379 1z57_A Dual specificity protei 98.8 5.7E-09 1.9E-13 105.8 8.6 98 484-584 19-124 (339)
380 3coi_A Mitogen-activated prote 98.8 3.4E-09 1.2E-13 108.6 6.9 94 484-583 29-131 (353)
381 2y4i_B KSR2, HKSR2, kinase sup 98.8 5.3E-10 1.8E-14 112.7 0.8 96 484-583 38-135 (319)
382 1wak_A Serine/threonine-protei 98.8 5.1E-09 1.8E-13 108.8 7.9 98 484-584 42-152 (397)
383 3e3p_A Protein kinase, putativ 98.8 4.3E-09 1.5E-13 108.0 7.2 95 484-580 28-131 (360)
384 2fst_X Mitogen-activated prote 98.8 3.1E-09 1E-13 109.7 5.9 95 484-583 34-137 (367)
385 1j1b_A Glycogen synthase kinas 98.8 3.3E-09 1.1E-13 111.6 6.2 95 484-583 59-161 (420)
386 3uzp_A CKI-delta, CKID, casein 98.8 1.4E-08 4.6E-13 101.1 9.4 96 484-584 14-111 (296)
387 3p23_A Serine/threonine-protei 98.8 6.9E-09 2.3E-13 109.5 7.2 82 484-569 29-111 (432)
388 4e7w_A Glycogen synthase kinas 98.8 6.5E-09 2.2E-13 108.3 6.7 96 484-583 45-146 (394)
389 2ra8_A Uncharacterized protein 98.8 2.3E-09 8E-14 109.9 3.2 173 87-264 138-341 (362)
390 4hgt_A Casein kinase I isoform 98.7 1.6E-08 5.5E-13 100.4 8.7 96 484-584 14-111 (296)
391 1q8y_A SR protein kinase; tran 98.7 1E-08 3.6E-13 105.6 7.2 97 484-583 24-136 (373)
392 2dyl_A Dual specificity mitoge 98.7 1.4E-08 4.9E-13 102.1 7.9 97 484-583 30-129 (318)
393 3rw6_A Nuclear RNA export fact 98.7 3.4E-10 1.2E-14 110.5 -3.9 66 134-201 168-237 (267)
394 2vx3_A Dual specificity tyrosi 98.7 2.9E-08 9.8E-13 102.9 9.2 97 484-583 59-162 (382)
395 3a99_A Proto-oncogene serine/t 98.7 8.1E-09 2.8E-13 104.3 4.9 97 484-583 48-154 (320)
396 3en9_A Glycoprotease, O-sialog 98.7 2E-08 6.9E-13 108.9 7.8 84 484-568 341-432 (540)
397 2eu9_A Dual specificity protei 98.7 2.9E-08 9.9E-13 101.3 8.6 98 484-584 24-129 (355)
398 3sv0_A Casein kinase I-like; t 98.7 3.7E-08 1.3E-12 105.3 9.4 96 484-584 12-109 (483)
399 3q60_A ROP5B; pseudokinase, tr 98.7 5E-08 1.7E-12 100.7 9.5 84 484-569 67-181 (371)
400 1zar_A RIO2 kinase; serine kin 98.5 1E-07 3.5E-12 94.4 6.9 77 484-564 95-189 (282)
401 1io0_A Tropomodulin; LRR prote 98.5 1.4E-08 5E-13 93.9 -0.5 94 104-197 28-136 (185)
402 3rw6_A Nuclear RNA export fact 98.4 2.6E-08 9E-13 97.1 0.2 80 109-190 167-257 (267)
403 1io0_A Tropomodulin; LRR prote 98.4 3.3E-08 1.1E-12 91.5 0.2 110 88-197 36-164 (185)
404 4azs_A Methyltransferase WBDD; 98.4 3.3E-07 1.1E-11 99.9 7.0 83 487-569 242-336 (569)
405 1zth_A RIO1 serine protein kin 98.0 6.8E-06 2.3E-10 80.0 6.2 82 484-567 52-165 (258)
406 3dzo_A Rhoptry kinase domain; 97.8 1.2E-05 4E-10 84.1 4.8 99 484-583 83-216 (413)
407 3e4g_A ATP synthase subunit S, 97.7 9.6E-06 3.3E-10 73.4 2.2 83 88-170 61-149 (176)
408 3e4g_A ATP synthase subunit S, 97.6 2.5E-05 8.5E-10 70.7 3.5 86 112-197 61-153 (176)
409 4gyi_A RIO2 kinase; protein ki 97.6 1.5E-05 5E-10 81.7 2.1 81 484-566 100-202 (397)
410 4fs7_A Uncharacterized protein 97.4 0.00063 2.2E-08 70.3 11.6 56 205-263 297-353 (394)
411 1pgv_A TMD-1, tropomodulin TMD 97.3 5E-05 1.7E-09 70.0 1.3 86 108-193 37-135 (197)
412 1pgv_A TMD-1, tropomodulin TMD 97.2 8.3E-05 2.8E-09 68.5 1.8 60 205-265 98-169 (197)
413 3d1u_A Putative fructosamine-3 97.2 0.00061 2.1E-08 67.2 7.4 75 484-562 20-97 (288)
414 4fs7_A Uncharacterized protein 97.1 0.0015 5.1E-08 67.5 10.0 171 87-263 161-376 (394)
415 3rfe_A Platelet glycoprotein I 97.1 0.00055 1.9E-08 58.8 5.2 59 65-124 7-67 (130)
416 4gt6_A Cell surface protein; l 97.0 0.0018 6.1E-08 66.9 9.4 132 103-240 256-390 (394)
417 3tm0_A Aminoglycoside 3'-phosp 97.0 0.0017 5.9E-08 62.7 8.2 79 486-565 21-100 (263)
418 4h09_A Hypothetical leucine ri 96.7 0.0056 1.9E-07 62.6 10.5 140 104-249 209-352 (379)
419 4gt6_A Cell surface protein; l 96.7 0.0026 9E-08 65.6 7.8 146 112-266 242-391 (394)
420 3rfe_A Platelet glycoprotein I 96.6 0.0031 1.1E-07 54.0 6.4 35 138-172 33-67 (130)
421 1nd4_A Aminoglycoside 3'-phosp 96.6 0.0022 7.6E-08 61.5 5.7 72 489-563 30-103 (264)
422 4h09_A Hypothetical leucine ri 96.5 0.011 3.8E-07 60.4 10.9 152 106-263 188-343 (379)
423 3f7w_A Putative fructosamine-3 94.1 0.096 3.3E-06 51.1 7.6 74 485-562 21-97 (288)
424 3dxp_A Putative acyl-COA dehyd 93.7 0.057 1.9E-06 54.6 5.1 78 485-563 44-129 (359)
425 4gkh_A Aminoglycoside 3'-phosp 92.0 0.59 2E-05 44.7 9.5 78 486-566 31-111 (272)
426 2k1k_A Ephrin type-A receptor 91.4 0.14 4.8E-06 33.0 2.8 30 347-376 7-36 (38)
427 3jr1_A Putative fructosamine-3 91.4 0.62 2.1E-05 46.0 9.0 74 485-562 42-118 (312)
428 2olc_A MTR kinase, methylthior 90.3 0.35 1.2E-05 49.4 6.2 75 485-561 36-121 (397)
429 3r70_A Aminoglycoside phosphot 87.1 0.87 3E-05 44.9 6.4 70 484-563 42-115 (320)
430 3ovc_A Hygromycin-B 4-O-kinase 85.6 2.2 7.4E-05 42.9 8.6 73 485-563 47-122 (362)
431 3tdw_A Gentamicin resistance p 85.4 1.9 6.5E-05 42.2 7.8 74 485-564 25-102 (306)
432 2ks1_B Epidermal growth factor 84.9 1.3 4.4E-05 29.4 4.1 17 353-369 13-29 (44)
433 3ats_A Putative uncharacterize 83.4 0.49 1.7E-05 47.4 2.6 79 486-564 27-122 (357)
434 2l2t_A Receptor tyrosine-prote 83.2 0.83 2.8E-05 30.3 2.7 7 362-368 21-27 (44)
435 3cxl_A N-chimerin; SH2, RHO-GA 81.1 0.21 7.2E-06 52.4 -1.3 55 492-546 152-215 (463)
436 2jwa_A Receptor tyrosine-prote 77.5 1.8 6.3E-05 28.6 2.9 8 352-359 13-20 (44)
437 2q83_A YTAA protein; 2635576, 74.5 6.9 0.00024 38.2 7.8 72 486-562 39-118 (346)
438 3sg8_A APH(2'')-ID; antibiotic 72.5 2.7 9.1E-05 40.9 4.1 74 485-564 26-105 (304)
439 1zyl_A Hypothetical protein YI 63.3 18 0.00061 35.1 8.0 75 486-562 33-114 (328)
440 2ks1_B Epidermal growth factor 57.0 12 0.00041 24.8 3.5 26 351-376 8-33 (44)
441 2l2t_A Receptor tyrosine-prote 54.9 17 0.00058 24.0 3.9 19 355-373 11-29 (44)
442 2l34_A TYRO protein tyrosine k 54.8 9.1 0.00031 23.6 2.5 26 348-373 4-29 (33)
443 2k9y_A Ephrin type-A receptor 52.6 6.5 0.00022 25.4 1.7 13 356-368 15-27 (41)
444 2knc_B Integrin beta-3; transm 48.0 17 0.00057 27.5 3.6 21 353-373 10-30 (79)
445 1nw1_A Choline kinase (49.2 KD 45.6 25 0.00084 36.0 5.7 72 485-562 79-159 (429)
446 3csv_A Aminoglycoside phosphot 42.6 50 0.0017 32.0 7.3 78 486-568 25-105 (333)
447 2ppq_A HSK, HK, homoserine kin 42.6 27 0.00092 33.7 5.3 74 486-562 29-110 (322)
448 2pyw_A Uncharacterized protein 42.2 36 0.0012 34.4 6.4 72 485-559 40-122 (420)
449 3feg_A Choline/ethanolamine ki 38.1 25 0.00087 35.3 4.3 72 486-562 57-137 (379)
450 2lz0_A Uncharacterized protein 33.8 90 0.0031 24.4 6.1 42 103-145 11-52 (100)
451 3i1a_A Spectinomycin phosphotr 33.6 70 0.0024 31.2 6.7 68 488-562 32-108 (339)
452 2lz0_A Uncharacterized protein 31.2 71 0.0024 25.0 5.1 46 123-169 7-52 (100)
453 2qg7_A Ethanolamine kinase PV0 28.5 92 0.0031 32.0 6.8 72 486-562 115-188 (458)
454 3dxq_A Choline/ethanolamine ki 26.7 50 0.0017 31.5 4.2 70 485-562 24-95 (301)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.9e-36 Score=304.53 Aligned_cols=260 Identities=27% Similarity=0.467 Sum_probs=172.4
Q ss_pred CCCchhHHHHHHHHHhcccCCcccCCCCCCCCCCCCC--ccceeeCCCC----C----------C---CcCCC-CCCCce
Q 043706 31 FGLNTDGVLLLSFKYSILSDPLSVLQNWNYDDATPCS--WTGVTCTQID----A----------T---TIPGS-PDMFRV 90 (586)
Q Consensus 31 ~~~~~~~~~Ll~~k~~l~~~~~~~l~~W~~~~~~~C~--w~gv~C~~~~----~----------~---~ip~~-~~~~~l 90 (586)
.|.+.|++||++||.++ .||. .+.+|.. +.+||. |.||.|+... + + .+|.. ..+.++
T Consensus 2 ~c~~~~~~aL~~~k~~~-~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDL-GNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHT-TCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhc-CCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 35678999999999999 5775 7899975 357888 9999997531 0 1 12211 123455
Q ss_pred EEEEcCC-CCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccC
Q 043706 91 ISLILPN-SQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSV 169 (586)
Q Consensus 91 ~~L~L~~-n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 169 (586)
+.|+|++ |.+.+.+|..|+.+++|++|+|++|.+++.+|..+..+++|++|+|++|.+++.+|..+..+++|++|+|++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 158 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcC
Confidence 5555553 555555555555555555555555555555555555555666666666666555566666666666666666
Q ss_pred CCCCCCCchhcCCCC-CCcEEecccccCCcCCCCCC--------------------------CCCcEEecccCCCCCcCC
Q 043706 170 NALAGKVPRNLTAVK-SLTVVSLRSNYFSGSIPSGF--------------------------TSVEVLDLSSNLFNGSLP 222 (586)
Q Consensus 170 N~l~~~~p~~l~~l~-~L~~L~L~~N~l~g~~p~~l--------------------------~~L~~L~Ls~N~l~~~~p 222 (586)
|++++.+|..++.++ +|+.|+|++|.+++.+|..+ ++|+.|+|++|.+++.+|
T Consensus 159 N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp SCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred CcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 666656666666655 66666666666655444332 233344444444443333
Q ss_pred cCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCccccCCCCC
Q 043706 223 LDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNVELCGKPLK 295 (586)
Q Consensus 223 ~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lc~~~~~ 295 (586)
. +.. ++|++|+|++|+++|.+|..+.. +++|+.|+|++|+++|.+|....+..+....+.+|+.+||.|+.
T Consensus 239 ~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 239 K-VGLSKNLNGLDLRNNRIYGTLPQGLTQ-LKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp G-CCCCTTCCEEECCSSCCEECCCGGGGG-CTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred c-ccccCCCCEEECcCCcccCcCChHHhc-CcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 3 222 67888889999998889988887 99999999999999999998866777888899999999998764
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=1.4e-30 Score=296.57 Aligned_cols=241 Identities=29% Similarity=0.425 Sum_probs=196.9
Q ss_pred cCCCCchhHHHHHHHHHhcccCCcccCCCCCCCCCCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCccc---Cc
Q 043706 29 PSFGLNTDGVLLLSFKYSILSDPLSVLQNWNYDDATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGS---VT 105 (586)
Q Consensus 29 ~~~~~~~~~~~Ll~~k~~l~~~~~~~l~~W~~~~~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~---~~ 105 (586)
+..+.+.|++||++||+++. ||. .+.+|.. +.+||.|.||+|+. .+|+.|+|+++.+.|. +|
T Consensus 6 ~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~-~~~~C~w~gv~C~~------------~~v~~L~L~~~~l~g~~~~l~ 70 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLP-DKN-LLPDWSS-NKNPCTFDGVTCRD------------DKVTSIDLSSKPLNVGFSAVS 70 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT-TSCGGGSTTEEEET------------TEEEEEECTTSCCCEEHHHHH
T ss_pred cccCCHHHHHHHHHHHhhCC-Ccc-cccCCCC-CCCCcCCcceEECC------------CcEEEEECCCCCcCCccCccC
Confidence 44456789999999999994 887 8999984 46899999999983 5788888888777775 33
Q ss_pred -----------------------cccCCCCCCCEEEccCCCCCCCCCc--cccCCCCCcEEEeeCCCCCCCCcccc-CCC
Q 043706 106 -----------------------KDLGLIQHLRHLDLSNNFFNGSLPL--SIFSATELQVLSLSNNAISGELPDLI-GQI 159 (586)
Q Consensus 106 -----------------------~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l 159 (586)
..++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++
T Consensus 71 ~~l~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 150 (768)
T 3rgz_A 71 SSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKL 150 (768)
T ss_dssp HHTTTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCC
T ss_pred hhHhccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccC
Confidence 5677888888999999988888888 88888999999999998888888766 788
Q ss_pred CCCcEEEccCCCCCCCCchh---cCCCCCCcEEecccccCCcCCCC-CCCCCcEEecccCCCCCcCCcCCCC-CcccEEE
Q 043706 160 PRLQLLNLSVNALAGKVPRN---LTAVKSLTVVSLRSNYFSGSIPS-GFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLN 234 (586)
Q Consensus 160 ~~L~~L~L~~N~l~~~~p~~---l~~l~~L~~L~L~~N~l~g~~p~-~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ 234 (586)
++|++|+|++|++++..|.. +.++++|++|++++|.+++.+|. .+++|++|+|++|.+++.+|. ++. ++|++|+
T Consensus 151 ~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~ 229 (768)
T 3rgz_A 151 NSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLD 229 (768)
T ss_dssp TTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEE
T ss_pred CCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEE
Confidence 89999999999988888877 78888899999999988877764 468899999999999988887 666 8899999
Q ss_pred cccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCc
Q 043706 235 LSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 235 ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
|++|+++|.+|..+.. +++|+.|+|++|+++|.+|.. ....+..+.+.+|.
T Consensus 230 Ls~n~l~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~ 280 (768)
T 3rgz_A 230 ISGNKLSGDFSRAIST-CTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENK 280 (768)
T ss_dssp CCSSCCCSCHHHHTTT-CSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSE
T ss_pred CcCCcCCCcccHHHhc-CCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCc
Confidence 9999999888888877 889999999999988887765 44455555555543
No 3
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.3e-30 Score=266.91 Aligned_cols=241 Identities=20% Similarity=0.267 Sum_probs=157.5
Q ss_pred CCCCchhHHHHHHHHHhcccCCcccCCCCC---CCCCCCCCccceeeCC--------------------CCCCCcCCCC-
Q 043706 30 SFGLNTDGVLLLSFKYSILSDPLSVLQNWN---YDDATPCSWTGVTCTQ--------------------IDATTIPGSP- 85 (586)
Q Consensus 30 ~~~~~~~~~~Ll~~k~~l~~~~~~~l~~W~---~~~~~~C~w~gv~C~~--------------------~~~~~ip~~~- 85 (586)
..+..+|+.||++||.++..|+.+.+..|. ....++|.|.|+.|.. ..++.+|...
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~~lp~~l~ 101 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLPQFPDQAF 101 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCSSCCSCGG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCchhcChhhh
Confidence 345678999999999998778877778894 3456789999999952 1122344321
Q ss_pred CCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCC-------
Q 043706 86 DMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQ------- 158 (586)
Q Consensus 86 ~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------- 158 (586)
.+.+++.|+|++|.+. .+|..++.+++|++|+|++|.++ .+|..+..+++|++|+|++|++.+.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 2455666666666666 56666666666666666666666 55666666666666666666666666655543
Q ss_pred --CCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCC--CCCCCcEEecccCCCCCcCCcCCCC-CcccEE
Q 043706 159 --IPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPS--GFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYL 233 (586)
Q Consensus 159 --l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~--~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L 233 (586)
+++|++|+|++|+++ .+|..++++++|+.|+|++|.+++..+. .+++|++|+|++|.+.+.+|..+.. ++|++|
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 666666666666666 5666666666666666666666643221 2356666666666666666666665 666677
Q ss_pred EcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc
Q 043706 234 NLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP 274 (586)
Q Consensus 234 ~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 274 (586)
+|++|++.+.+|..+.. +++|+.|||++|++.+.+|..+.
T Consensus 259 ~L~~n~~~~~~p~~~~~-l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 259 ILKDCSNLLTLPLDIHR-LTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp ECTTCTTCCBCCTTGGG-CTTCCEEECTTCTTCCCCCGGGG
T ss_pred ECCCCCchhhcchhhhc-CCCCCEEeCCCCCchhhccHHHh
Confidence 77766666666666655 66677777777666666665543
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.96 E-value=1.5e-29 Score=288.06 Aligned_cols=212 Identities=33% Similarity=0.500 Sum_probs=166.7
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|+|++|.+.+.+|..++.+++|++|+|++|.+++.+|..++.+++|++|+|++|+++|.+|..++.+++|+.|+
T Consensus 465 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 544 (768)
T 3rgz_A 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLD 544 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEE
T ss_pred CCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEE
Confidence 45666677777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred ccCCCCCCCCchhc------------------------------------------------------------------
Q 043706 167 LSVNALAGKVPRNL------------------------------------------------------------------ 180 (586)
Q Consensus 167 L~~N~l~~~~p~~l------------------------------------------------------------------ 180 (586)
|++|.++|.+|..+
T Consensus 545 Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~ 624 (768)
T 3rgz_A 545 LNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHT 624 (768)
T ss_dssp CCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEEC
T ss_pred CCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccC
Confidence 77777766666543
Q ss_pred ----CCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcC
Q 043706 181 ----TAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRI 252 (586)
Q Consensus 181 ----~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l 252 (586)
..+++|+.|+|++|+++|.+|..+ +.|+.|+|++|+++|.+|..++. ++|+.|||++|+++|.+|..+.. +
T Consensus 625 ~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~-l 703 (768)
T 3rgz_A 625 SPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA-L 703 (768)
T ss_dssp CCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGG-C
T ss_pred chhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhC-C
Confidence 224567778888888888887654 77888888888888888888887 88999999999999999998887 9
Q ss_pred CCCcEEEccCCCCcccCCCCCcCcccccccccCCccccCCCCCCCCCC
Q 043706 253 PQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNVELCGKPLKNLCSI 300 (586)
Q Consensus 253 ~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lc~~~~~~~c~~ 300 (586)
+.|++|||++|+|+|.||....+..+....+.||+.+||.|+. .|..
T Consensus 704 ~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 704 TMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp CCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred CCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 9999999999999999998888888888899999999999876 6754
No 5
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=9.1e-30 Score=283.67 Aligned_cols=237 Identities=20% Similarity=0.323 Sum_probs=199.0
Q ss_pred chhHHHHHHHHHhcccCCccc-------CCCCCCCCCCCCCc---cceeeCCCCCCCcCCCCCCCceEEEEcCCCCCccc
Q 043706 34 NTDGVLLLSFKYSILSDPLSV-------LQNWNYDDATPCSW---TGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGS 103 (586)
Q Consensus 34 ~~~~~~Ll~~k~~l~~~~~~~-------l~~W~~~~~~~C~w---~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~ 103 (586)
..|+.||.+|+.++..+.... ..+|+.. .++|.| .||+|+.. .+|+.|+|+++++.|.
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~-----------~~V~~L~L~~~~l~g~ 96 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSN-----------GRVTGLSLEGFGASGR 96 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTT-----------CCEEEEECTTSCCEEE
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCC-----------CCEEEEEecCcccCCc
Confidence 368999999999985443322 2379854 689999 99999864 6899999999999999
Q ss_pred CccccCCCCCCCEEEccCCC------------------------------------------------------------
Q 043706 104 VTKDLGLIQHLRHLDLSNNF------------------------------------------------------------ 123 (586)
Q Consensus 104 ~~~~l~~l~~L~~L~Ls~N~------------------------------------------------------------ 123 (586)
+|+++++|++|++|+|++|.
T Consensus 97 lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~ 176 (636)
T 4eco_A 97 VPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIK 176 (636)
T ss_dssp ECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCC
T ss_pred CChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccc
Confidence 99999999999999999884
Q ss_pred ------------------CCCCCCccccCCCCCcEEEeeCCCCCCC-----------------CccccC--CCCCCcEEE
Q 043706 124 ------------------FNGSLPLSIFSATELQVLSLSNNAISGE-----------------LPDLIG--QIPRLQLLN 166 (586)
Q Consensus 124 ------------------l~g~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~ 166 (586)
++| +|.+++++++|++|+|++|+++|. +|..++ ++++|++|+
T Consensus 177 ~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~ 255 (636)
T 4eco_A 177 KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVE 255 (636)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEE
Confidence 345 888999999999999999999986 999999 999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEeccccc-CCc-CCCCCC---------CCCcEEecccCCCCCcCCc--CCCC-CcccE
Q 043706 167 LSVNALAGKVPRNLTAVKSLTVVSLRSNY-FSG-SIPSGF---------TSVEVLDLSSNLFNGSLPL--DFGG-GNLRY 232 (586)
Q Consensus 167 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~g-~~p~~l---------~~L~~L~Ls~N~l~~~~p~--~~~~-~~L~~ 232 (586)
|++|++.+.+|..|+++++|++|+|++|. ++| .+|..+ ++|++|+|++|+++ .+|. .++. ++|++
T Consensus 256 L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~ 334 (636)
T 4eco_A 256 VYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGM 334 (636)
T ss_dssp EECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCE
T ss_pred ecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCE
Confidence 99999999999999999999999999998 998 788653 78999999999999 7887 7777 88999
Q ss_pred EEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-Ccc-cccccccCCc
Q 043706 233 LNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVN-QRMESFSGNV 287 (586)
Q Consensus 233 L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~-~~~~~~~~n~ 287 (586)
|++++|+++|.+| .+.. +++|+.|+|++|+++ .+|..+. ... +..+.+.+|.
T Consensus 335 L~L~~N~l~g~ip-~~~~-l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 388 (636)
T 4eco_A 335 LECLYNQLEGKLP-AFGS-EIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNK 388 (636)
T ss_dssp EECCSCCCEEECC-CCEE-EEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSC
T ss_pred EeCcCCcCccchh-hhCC-CCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCc
Confidence 9999999998888 6555 888888888888888 6666543 333 5555555554
No 6
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=1.6e-29 Score=287.59 Aligned_cols=233 Identities=19% Similarity=0.282 Sum_probs=198.3
Q ss_pred CchhHHHHHHHHHhcccCCcccCCCCCCCC----CCC--CCc------------cceeeCCCCCCCcCCCCCCCceEEEE
Q 043706 33 LNTDGVLLLSFKYSILSDPLSVLQNWNYDD----ATP--CSW------------TGVTCTQIDATTIPGSPDMFRVISLI 94 (586)
Q Consensus 33 ~~~~~~~Ll~~k~~l~~~~~~~l~~W~~~~----~~~--C~w------------~gv~C~~~~~~~ip~~~~~~~l~~L~ 94 (586)
...|+.||++||.++ .+| +|+.++ .+| |.| .||.|+.. .+|+.|+
T Consensus 267 ~~~d~~ALl~~k~~l-~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~-----------~~V~~L~ 329 (876)
T 4ecn_A 267 YIKDYKALKAIWEAL-DGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN-----------GRVTGLS 329 (876)
T ss_dssp HHHHHHHHHHHHHHT-TGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT-----------SCEEEEE
T ss_pred chHHHHHHHHHHHHc-CCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCC-----------CCEEEEE
Confidence 347899999999999 455 786554 355 999 99999863 6899999
Q ss_pred cCCCCCcccCccccCCCCCCCEEEc-cCCCCCCC----------------------------------------------
Q 043706 95 LPNSQLLGSVTKDLGLIQHLRHLDL-SNNFFNGS---------------------------------------------- 127 (586)
Q Consensus 95 L~~n~l~~~~~~~l~~l~~L~~L~L-s~N~l~g~---------------------------------------------- 127 (586)
|+++++.|.+|+.|++|++|+.|+| ++|.+.|.
T Consensus 330 Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~ 409 (876)
T 4ecn_A 330 LAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAIN 409 (876)
T ss_dssp CTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred CccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhh
Confidence 9999999999999999999999999 77765444
Q ss_pred ------------------------------CCccccCCCCCcEEEeeCCCCCC-----------------CCccccC--C
Q 043706 128 ------------------------------LPLSIFSATELQVLSLSNNAISG-----------------ELPDLIG--Q 158 (586)
Q Consensus 128 ------------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~ 158 (586)
+|..|+++++|++|+|++|+|+| .+|..++ +
T Consensus 410 ~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~ 489 (876)
T 4ecn_A 410 RNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSN 489 (876)
T ss_dssp TCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG
T ss_pred hCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhcc
Confidence 88889999999999999999998 3899988 9
Q ss_pred CCCCcEEEccCCCCCCCCchhcCCCCCCcEEeccccc-CCc-CCCCCC----------CCCcEEecccCCCCCcCCc--C
Q 043706 159 IPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNY-FSG-SIPSGF----------TSVEVLDLSSNLFNGSLPL--D 224 (586)
Q Consensus 159 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~g-~~p~~l----------~~L~~L~Ls~N~l~~~~p~--~ 224 (586)
+++|++|+|++|++.+.+|..|+++++|+.|+|++|+ ++| .+|..+ ++|+.|+|++|.++ .+|. .
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~ 568 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASAS 568 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHH
T ss_pred CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhh
Confidence 9999999999999999999999999999999999998 998 777543 48999999999999 8887 7
Q ss_pred CCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-Ccc-cccccccCCc
Q 043706 225 FGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVN-QRMESFSGNV 287 (586)
Q Consensus 225 ~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~-~~~~~~~~n~ 287 (586)
+.. ++|+.|+|++|+++ .+| .+.. +++|+.|+|++|+++ .+|..+. ... +..+.+.+|.
T Consensus 569 l~~L~~L~~L~Ls~N~l~-~lp-~~~~-L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~ 630 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVR-HLE-AFGT-NVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNK 630 (876)
T ss_dssp HTTCTTCCEEECTTSCCC-BCC-CCCT-TSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSC
T ss_pred hhcCCCCCEEECCCCCcc-cch-hhcC-CCcceEEECcCCccc-cchHHHhhccccCCEEECcCCC
Confidence 777 89999999999998 888 6655 889999999999998 7776554 334 5566666664
No 7
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2e-26 Score=230.83 Aligned_cols=224 Identities=20% Similarity=0.197 Sum_probs=199.8
Q ss_pred cceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCC-
Q 043706 69 TGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNA- 147 (586)
Q Consensus 69 ~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~- 147 (586)
..+.|...+++.+|.... .+++.|+|++|.+.+..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.
T Consensus 14 ~~~~c~~~~l~~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 92 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGIP-AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQ 92 (285)
T ss_dssp CEEECCSSCCSSCCTTCC-TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTT
T ss_pred eEEEcCcCCcccCCcCCC-CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCC
Confidence 458899999999997664 789999999999999888899999999999999999998889999999999999999998
Q ss_pred CCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCcC
Q 043706 148 ISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPLD 224 (586)
Q Consensus 148 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~~ 224 (586)
++...|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+.. +++|++|+|++|++++..+..
T Consensus 93 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 172 (285)
T 1ozn_A 93 LRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERA 172 (285)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTT
T ss_pred ccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHH
Confidence 88777899999999999999999999988999999999999999999999776654 589999999999999877777
Q ss_pred CCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCCccccCCCC
Q 043706 225 FGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGNVELCGKPL 294 (586)
Q Consensus 225 ~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~~lc~~~~ 294 (586)
+.. ++|++|+|++|.+++..|..+.. +++|+.|+|++|++++..+..+. ...+..+.+.+|+..|+++.
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 173 FRGLHSLDRLLLHQNRVAHVHPHAFRD-LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred hcCccccCEEECCCCcccccCHhHccC-cccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 777 99999999999999888888877 99999999999999987665333 45667788899999887653
No 8
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=2.7e-26 Score=232.26 Aligned_cols=229 Identities=18% Similarity=0.223 Sum_probs=168.2
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCC--CCc----------
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGS--LPL---------- 130 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~--~p~---------- 130 (586)
.+.|.|.+|.|...+++.+|.... .+++.|+|++|.+....+..|..+++|++|+|++|.++.. .|.
T Consensus 4 ~C~C~~~~l~c~~~~l~~ip~~~~-~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 4 RCSCSGTEIRCNSKGLTSVPTGIP-SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCC-TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCeeCCCEEEcCCCCcccCCCCCC-CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 456899999999999999998665 6899999999999866556688899999999999888732 233
Q ss_pred -------------cccCCCCCcEEEeeCCCCCCCCc-cccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccC
Q 043706 131 -------------SIFSATELQVLSLSNNAISGELP-DLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYF 196 (586)
Q Consensus 131 -------------~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 196 (586)
.+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+++..+..+..+++|+.|+|++|.+
T Consensus 83 L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 162 (306)
T 2z66_A 83 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSF 162 (306)
T ss_dssp EECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEE
T ss_pred EECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcc
Confidence 34455555555555665554433 4566677777777777777766677777777777777777777
Q ss_pred Cc-CCCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCC
Q 043706 197 SG-SIPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPG 271 (586)
Q Consensus 197 ~g-~~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~ 271 (586)
++ .+|.. +++|++|+|++|.+++..|..+.. ++|+.|+|++|++++..+..+.. +++|+.|||++|++++.+|.
T Consensus 163 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 163 QENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC-LNSLQVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT-CTTCCEEECTTSCCCBCSSS
T ss_pred ccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC-cccCCEeECCCCCCcccCHH
Confidence 65 34544 367888888888888777777766 78888888888887655545554 88888888888888888877
Q ss_pred CCcCc--ccccccccCCccccCCC
Q 043706 272 ALPLV--NQRMESFSGNVELCGKP 293 (586)
Q Consensus 272 ~~~~~--~~~~~~~~~n~~lc~~~ 293 (586)
.+... .+..+.+.+|+..|++.
T Consensus 242 ~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 242 ELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp SCCCCCTTCCEEECTTCCEECSGG
T ss_pred HHHhhhccCCEEEccCCCeecccC
Confidence 66532 56677778888777654
No 9
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.93 E-value=1.3e-25 Score=239.99 Aligned_cols=224 Identities=20% Similarity=0.203 Sum_probs=176.6
Q ss_pred ccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCC
Q 043706 68 WTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNA 147 (586)
Q Consensus 68 w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 147 (586)
|..|.|...+++.+|.... .+++.|+|++|++.+..+..|.++++|+.|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP-SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCC-CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 6789999999999998766 689999999999999999999999999999999999998888999999999999999999
Q ss_pred CCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEeccc-------------------------ccCCcCCCC
Q 043706 148 ISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRS-------------------------NYFSGSIPS 202 (586)
Q Consensus 148 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-------------------------N~l~g~~p~ 202 (586)
|++..+..|..+++|++|+|++|+++...+..|.++++|+.|+|++ |.+++. |.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~ 213 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PN 213 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-cc
Confidence 9987778899999999999999998865554555555555555554 444422 21
Q ss_pred --CCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-Cccc
Q 043706 203 --GFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQ 278 (586)
Q Consensus 203 --~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~ 278 (586)
.+++|+.|+|++|.|++..|..|.. ++|+.|+|++|++++..+..+.. +++|+.|||++|+|++..+..+. ...+
T Consensus 214 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L 292 (452)
T 3zyi_A 214 LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDG-LASLVELNLAHNNLSSLPHDLFTPLRYL 292 (452)
T ss_dssp CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCSCCCTTSSTTCTTC
T ss_pred ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcC-CCCCCEEECCCCcCCccChHHhccccCC
Confidence 1356777777777777766766666 77888888888887665655555 88888888888888877666543 4556
Q ss_pred ccccccCCccccCCCC
Q 043706 279 RMESFSGNVELCGKPL 294 (586)
Q Consensus 279 ~~~~~~~n~~lc~~~~ 294 (586)
..+.+.+|++.|+|.+
T Consensus 293 ~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 293 VELHLHHNPWNCDCDI 308 (452)
T ss_dssp CEEECCSSCEECSTTT
T ss_pred CEEEccCCCcCCCCCc
Confidence 7788889999888764
No 10
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=5.2e-25 Score=218.80 Aligned_cols=213 Identities=20% Similarity=0.230 Sum_probs=97.5
Q ss_pred CCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEe
Q 043706 64 TPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSL 143 (586)
Q Consensus 64 ~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 143 (586)
+.|.|.|+.|.-. .+++.+++++++++. +|..+. ++|+.|+|++|.+++..+..|..+++|++|+|
T Consensus 3 ~~C~~~~~~C~c~-----------~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 68 (270)
T 2o6q_A 3 ALCKKDGGVCSCN-----------NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYL 68 (270)
T ss_dssp CCBGGGTCSBEEE-----------TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEEC
T ss_pred ccCCCCCCCCEeC-----------CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEEC
Confidence 4566666665421 223344455544443 333222 34455555555554444444445555555555
Q ss_pred eCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCc
Q 043706 144 SNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGS 220 (586)
Q Consensus 144 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~ 220 (586)
++|.++...+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+.. +++|++|+|++|.+++.
T Consensus 69 ~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 148 (270)
T 2o6q_A 69 NDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSL 148 (270)
T ss_dssp CSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCcc
Confidence 555554333334444555555555555554444444444555555555555554443322 24455555555555543
Q ss_pred CCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCCccccC
Q 043706 221 LPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGNVELCG 291 (586)
Q Consensus 221 ~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~~lc~ 291 (586)
.+..|.. ++|+.|+|++|++++..+..+.. +++|+.|+|++|++++..+..+. ...+..+.+.+|++.|+
T Consensus 149 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 149 PKGVFDKLTSLKELRLYNNQLKRVPEGAFDK-LTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTT-CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CHhHccCCcccceeEecCCcCcEeChhHhcc-CCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 3333433 45555555555554322222222 45555555555555544333222 22334444445554444
No 11
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=2.4e-25 Score=237.12 Aligned_cols=225 Identities=21% Similarity=0.224 Sum_probs=176.0
Q ss_pred CccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCC
Q 043706 67 SWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNN 146 (586)
Q Consensus 67 ~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 146 (586)
.|..|.|...+++.+|.... ..++.|+|++|++.+..+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGIS-TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCC-TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCC-CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 36789999999999998776 68888999999999888888999999999999999998888888888999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEeccc-------------------------ccCCcCCC
Q 043706 147 AISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRS-------------------------NYFSGSIP 201 (586)
Q Consensus 147 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-------------------------N~l~g~~p 201 (586)
+|+...+..|..+++|++|+|++|.++...+..|.++++|+.|+|++ |.++ .+|
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~ 201 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP 201 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc
Confidence 99877777788888888888888888755554555555555555555 4444 222
Q ss_pred C--CCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-Ccc
Q 043706 202 S--GFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVN 277 (586)
Q Consensus 202 ~--~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~ 277 (586)
. .+++|+.|+|++|.|++..|..|.. ++|+.|+|++|++++..+..+.. +++|+.|||++|+|++..+..+. ...
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~ 280 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDN-LQSLVEINLAHNNLTLLPHDLFTPLHH 280 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTT-CTTCCEEECTTSCCCCCCTTTTSSCTT
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcC-CCCCCEEECCCCCCCccChhHhccccC
Confidence 2 1356777777777777777777776 78888888888888665655555 88999999999999877776654 456
Q ss_pred cccccccCCccccCCCC
Q 043706 278 QRMESFSGNVELCGKPL 294 (586)
Q Consensus 278 ~~~~~~~~n~~lc~~~~ 294 (586)
+..+.+.+|++.|+|.+
T Consensus 281 L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 281 LERIHLHHNPWNCNCDI 297 (440)
T ss_dssp CCEEECCSSCEECSSTT
T ss_pred CCEEEcCCCCccCCCCc
Confidence 67788899999998764
No 12
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=3.5e-25 Score=220.73 Aligned_cols=221 Identities=23% Similarity=0.198 Sum_probs=193.3
Q ss_pred ceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCC
Q 043706 70 GVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAIS 149 (586)
Q Consensus 70 gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (586)
.+.|.+.+.+.+|.... .+++.|+|++|.+.+..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.++
T Consensus 11 ~~~c~~~~l~~ip~~l~-~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 89 (276)
T 2z62_A 11 TYQCMELNFYKIPDNLP-FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (276)
T ss_dssp EEECTTSCCSSCCSSSC-TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred eEEecCCCccccCCCCC-CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccC
Confidence 58899988999998765 68999999999999988889999999999999999999888889999999999999999999
Q ss_pred CCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcC-CCCC---CCCCcEEecccCCCCCcCCcCC
Q 043706 150 GELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGS-IPSG---FTSVEVLDLSSNLFNGSLPLDF 225 (586)
Q Consensus 150 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~-~p~~---l~~L~~L~Ls~N~l~~~~p~~~ 225 (586)
+..+..|.++++|++|++++|++++..+..+..+++|+.|+|++|.+++. +|.. +++|+.|+|++|++++..+..+
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 169 (276)
T 2z62_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 169 (276)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHh
Confidence 88889999999999999999999988777899999999999999999873 5665 4899999999999998877777
Q ss_pred CC-Cccc----EEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCCccccCCC
Q 043706 226 GG-GNLR----YLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGNVELCGKP 293 (586)
Q Consensus 226 ~~-~~L~----~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~~lc~~~ 293 (586)
.. .+|+ .|++++|.+++ ++...+. ..+|+.|+|++|++++..+..+. ...+..+.+.+|+..|+++
T Consensus 170 ~~l~~L~~l~l~L~ls~n~l~~-~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 170 RVLHQMPLLNLSLDLSLNPMNF-IQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp HHHHTCTTCCEEEECCSSCCCE-ECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred hhhhhccccceeeecCCCcccc-cCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 65 5555 89999999984 5555554 56899999999999987776544 5567788899999988765
No 13
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=5.5e-24 Score=211.41 Aligned_cols=211 Identities=20% Similarity=0.206 Sum_probs=184.1
Q ss_pred CCCCCCCCCC--CccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccC
Q 043706 57 NWNYDDATPC--SWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFS 134 (586)
Q Consensus 57 ~W~~~~~~~C--~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~ 134 (586)
.|.+. .+.| .|..|.|...+++.+|.... ..++.|+|++|++.+..+..|..+++|++|+|++|.|+...+..|..
T Consensus 6 ~~~~~-~C~c~~~~~~l~~~~~~l~~ip~~~~-~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~ 83 (270)
T 2o6q_A 6 KKDGG-VCSCNNNKNSVDCSSKKLTAIPSNIP-ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKE 83 (270)
T ss_dssp GGGTC-SBEEETTTTEEECTTSCCSSCCSCCC-TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSS
T ss_pred CCCCC-CCEeCCCCCEEEccCCCCCccCCCCC-CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcC
Confidence 46532 2334 58899999999999998766 68999999999999988889999999999999999999766667789
Q ss_pred CCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEe
Q 043706 135 ATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLD 211 (586)
Q Consensus 135 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~ 211 (586)
+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+.. +++|+.|+
T Consensus 84 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 163 (270)
T 2o6q_A 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELR 163 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeE
Confidence 999999999999999888888999999999999999999988888999999999999999999766544 58999999
Q ss_pred cccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCC
Q 043706 212 LSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIP 270 (586)
Q Consensus 212 Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip 270 (586)
|++|.+++..+..|.. ++|++|+|++|++++ +|...+..+++|+.|+|++|++...-+
T Consensus 164 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 164 LYNNQLKRVPEGAFDKLTELKTLKLDNNQLKR-VPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ecCCcCcEeChhHhccCCCcCEEECCCCcCCc-CCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9999999887777877 999999999999995 555544449999999999999986544
No 14
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.92 E-value=2.3e-24 Score=222.69 Aligned_cols=178 Identities=21% Similarity=0.196 Sum_probs=148.1
Q ss_pred CCCCCccce-eeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEE
Q 043706 63 ATPCSWTGV-TCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVL 141 (586)
Q Consensus 63 ~~~C~w~gv-~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 141 (586)
.++|.|.|+ .|...+++.+|.... .+++.|+|++|++.+..+..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~c~~~~~~l~~iP~~~~-~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGICKGSSGSLNSIPSGLT-EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSEEECCSTTCSSCCTTCC-TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeEeeCCCCCccccccccc-ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 568999987 344667888988665 689999999999998877899999999999999999998888899999999999
Q ss_pred EeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCc-hhcCCCCCCcEEeccccc-CCcCCCCC---CCCCcEEecccCC
Q 043706 142 SLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVP-RNLTAVKSLTVVSLRSNY-FSGSIPSG---FTSVEVLDLSSNL 216 (586)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~-l~g~~p~~---l~~L~~L~Ls~N~ 216 (586)
+|++|++++..+..|..+++|++|+|++|++++..+ ..+.++++|+.|++++|+ +.+..+.. +++|++|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999997666669999999999999999985433 478999999999999995 66555554 4788999999999
Q ss_pred CCCcCCcCCCC-CcccEEEcccCcCC
Q 043706 217 FNGSLPLDFGG-GNLRYLNLSYNKIS 241 (586)
Q Consensus 217 l~~~~p~~~~~-~~L~~L~ls~N~l~ 241 (586)
+++..|..+.. ++|++|++++|.+.
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCST
T ss_pred cCccCHHHHhccccCCeecCCCCccc
Confidence 99888877765 56666666555553
No 15
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.92 E-value=8.3e-25 Score=223.64 Aligned_cols=234 Identities=18% Similarity=0.226 Sum_probs=194.1
Q ss_pred cCCcccCCCCCCC-CCCCCCccceeeCCCCC-CCcCCC--------------CCCCceEEEEcCCCCCcccCccccCCCC
Q 043706 49 SDPLSVLQNWNYD-DATPCSWTGVTCTQIDA-TTIPGS--------------PDMFRVISLILPNSQLLGSVTKDLGLIQ 112 (586)
Q Consensus 49 ~~~~~~l~~W~~~-~~~~C~w~gv~C~~~~~-~~ip~~--------------~~~~~l~~L~L~~n~l~~~~~~~l~~l~ 112 (586)
.|+...|..|... ..++|.|.+..|..... ..+... ....+++.|+|++|++. .+|..++.++
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~ 104 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLS 104 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGT
T ss_pred chHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCC
Confidence 3444556677532 24689999888832111 111110 12368999999999998 6888899999
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCC---------C
Q 043706 113 HLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTA---------V 183 (586)
Q Consensus 113 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~---------l 183 (586)
+|++|+|++|.|+ .+|..+..+++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+|..+.. +
T Consensus 105 ~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l 182 (328)
T 4fcg_A 105 HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGL 182 (328)
T ss_dssp TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEES
T ss_pred CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccC
Confidence 9999999999999 89999999999999999999999 88999999999999999999999999988765 9
Q ss_pred CCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEE
Q 043706 184 KSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTID 259 (586)
Q Consensus 184 ~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~ 259 (586)
++|+.|+|++|.++ .+|.. +++|++|+|++|.+++ +|..+.. ++|++|+|++|++.+.+|..+.. +++|+.|+
T Consensus 183 ~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~-l~~L~~L~ 259 (328)
T 4fcg_A 183 VNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGG-RAPLKRLI 259 (328)
T ss_dssp TTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTC-CCCCCEEE
T ss_pred CCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcC-CCCCCEEE
Confidence 99999999999999 77765 4889999999999996 5556766 99999999999999999998887 99999999
Q ss_pred ccCCCCcccCCCCCc-CcccccccccCCcc
Q 043706 260 LSFNNLTGAIPGALP-LVNQRMESFSGNVE 288 (586)
Q Consensus 260 Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~~ 288 (586)
|++|++.+.+|..+. ...+..+.+.+|..
T Consensus 260 L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 260 LKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp CTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred CCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 999999999998764 34555666666653
No 16
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.6e-24 Score=211.40 Aligned_cols=190 Identities=21% Similarity=0.181 Sum_probs=133.6
Q ss_pred CCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEee
Q 043706 65 PCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLS 144 (586)
Q Consensus 65 ~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 144 (586)
||.|.|+.|.. ..+.++++++++.. +|..+. ++|+.|+|++|.+++..+..|..+++|++|+|+
T Consensus 4 Cp~~~gC~C~~-------------~~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 67 (251)
T 3m19_A 4 CETVTGCTCNE-------------GKKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLD 67 (251)
T ss_dssp CHHHHSSEEEG-------------GGTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCCCCceEcCC-------------CCeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECC
Confidence 55677777742 23456777777664 444443 567777777777777777677777777777777
Q ss_pred CCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcC
Q 043706 145 NNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSL 221 (586)
Q Consensus 145 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~ 221 (586)
+|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.|++..+.. +++|+.|+|++|+|++..
T Consensus 68 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 68 YNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccC
Confidence 77777766677777777777777777777666666777777777777777777555543 467777777777777666
Q ss_pred CcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCC
Q 043706 222 PLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPG 271 (586)
Q Consensus 222 p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~ 271 (586)
+..|.. ++|++|+|++|++++..+..+.. +++|+.|+|++|++++....
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDR-LGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTT-CTTCCEEECCSCCBCTTSTT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhC-CCCCCEEEeeCCceeCCccc
Confidence 666665 78888888888888554444544 88888888888888876443
No 17
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.91 E-value=2.3e-23 Score=213.15 Aligned_cols=216 Identities=21% Similarity=0.279 Sum_probs=152.4
Q ss_pred CCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEe
Q 043706 64 TPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSL 143 (586)
Q Consensus 64 ~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 143 (586)
+.|.|+.+.|...+++.+|.... ..++.|+|++|.+.+..+..|+.+++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLP-PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CcCCCeEEEecCCCccccCccCC-CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 45789999999988899987665 68999999999999988889999999999999999999888999999999999999
Q ss_pred eCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCc--CCCCC---CCCCcEEecccCCCC
Q 043706 144 SNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSG--SIPSG---FTSVEVLDLSSNLFN 218 (586)
Q Consensus 144 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g--~~p~~---l~~L~~L~Ls~N~l~ 218 (586)
++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|+.|++++|.++. ..+.. +++|++|++++|.++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 999988 4555443 677777777777776666667777777777777777642 33333 356666666666665
Q ss_pred CcCCcCCCCCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCC
Q 043706 219 GSLPLDFGGGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGN 286 (586)
Q Consensus 219 ~~~p~~~~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n 286 (586)
. +|..+. ++|++|++++|++++..|..+.. +++|+.|+|++|.+++..|..+. ...+..+.+.+|
T Consensus 185 ~-l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N 250 (330)
T 1xku_A 185 T-IPQGLP-PSLTELHLDGNKITKVDAASLKG-LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN 250 (330)
T ss_dssp S-CCSSCC-TTCSEEECTTSCCCEECTGGGTT-CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSS
T ss_pred c-CCcccc-ccCCEEECCCCcCCccCHHHhcC-CCCCCEEECCCCcCceeChhhccCCCCCCEEECCCC
Confidence 3 333322 45666666666665544444444 56666666666666655554332 223333444444
No 18
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.91 E-value=3.9e-24 Score=203.82 Aligned_cols=155 Identities=21% Similarity=0.205 Sum_probs=121.6
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEE
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLS 142 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 142 (586)
.+.|.|.+|.|...+.+.+|.... .+++.|+|++|++.+..+..|..+++|++|+|++|.|++..+..|..+++|++|+
T Consensus 4 ~C~C~~~~v~c~~~~l~~~p~~~~-~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGRTSVPTGIP-AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEECCCEEEecCCCccCCCCCCC-CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 456899999999988888887664 5888999999998887777788889999999999988876666678888899999
Q ss_pred eeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCC
Q 043706 143 LSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFN 218 (586)
Q Consensus 143 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~ 218 (586)
|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+.. +++|+.|+|++|.+.
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 9988888777777888888888888888888776667788888888888888777544433 244555555555443
No 19
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.91 E-value=9.7e-24 Score=225.51 Aligned_cols=185 Identities=21% Similarity=0.251 Sum_probs=158.2
Q ss_pred CCCCccc--eeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCC-CccccCCCCCcE
Q 043706 64 TPCSWTG--VTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSL-PLSIFSATELQV 140 (586)
Q Consensus 64 ~~C~w~g--v~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~ 140 (586)
..|.|.+ |.|...+++.+|. .. .+++.|+|++|.+.+..|..|+.+++|++|+|++|.+.+.+ |..|.++++|++
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~-l~-~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~ 83 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPE-LP-AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLII 83 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCC-CC-TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCE
T ss_pred ceeEEEccccCcCCCCcccCCC-CC-CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCE
Confidence 3465555 9999999999998 33 78999999999999999999999999999999999998766 567899999999
Q ss_pred EEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchh--cCCCCCCcEEecccccCCcCCCCC----CCCCcEEeccc
Q 043706 141 LSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRN--LTAVKSLTVVSLRSNYFSGSIPSG----FTSVEVLDLSS 214 (586)
Q Consensus 141 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~g~~p~~----l~~L~~L~Ls~ 214 (586)
|+|++|++++..|..|+++++|++|+|++|++++.+|.. |..+++|+.|+|++|.+++..|.. +++|++|+|++
T Consensus 84 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 84 LKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp EECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTT
T ss_pred EeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCC
Confidence 999999999988999999999999999999999866665 999999999999999999887764 48999999999
Q ss_pred CCCCCcCCcCCCC-----------------------------------CcccEEEcccCcCCCcCcHHHHh
Q 043706 215 NLFNGSLPLDFGG-----------------------------------GNLRYLNLSYNKISGSISPEFAK 250 (586)
Q Consensus 215 N~l~~~~p~~~~~-----------------------------------~~L~~L~ls~N~l~g~ip~~~~~ 250 (586)
|.+++..+..+.. ++|++|++++|++++.+|..+..
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHH
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhc
Confidence 9999887765543 45777777777777666655543
No 20
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.91 E-value=2.7e-23 Score=212.76 Aligned_cols=218 Identities=21% Similarity=0.257 Sum_probs=167.2
Q ss_pred CCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEe
Q 043706 64 TPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSL 143 (586)
Q Consensus 64 ~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 143 (586)
+.|.|..+.|...+++.+|.... .+++.|+|++|.+.+..+..|..+++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEIS-PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCC-TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEEC
T ss_pred CcccCCEEECCCCCccccCCCCC-CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEEC
Confidence 45789999999988999998765 68999999999999988889999999999999999999888999999999999999
Q ss_pred eCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCc--CCCCCC-----------------
Q 043706 144 SNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSG--SIPSGF----------------- 204 (586)
Q Consensus 144 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g--~~p~~l----------------- 204 (586)
++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++. ..|..+
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTG 186 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCc
Confidence 999998 5665554 788888888888887666678888888888888888752 334332
Q ss_pred ------CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-Cc
Q 043706 205 ------TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LV 276 (586)
Q Consensus 205 ------~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~ 276 (586)
++|+.|+|++|.+++..+..+.. ++|+.|+|++|++++..+..+.. +++|+.|+|++|+++ .+|..+. ..
T Consensus 187 l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~-~lp~~l~~l~ 264 (332)
T 2ft3_A 187 IPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSF-LPTLRELHLDNNKLS-RVPAGLPDLK 264 (332)
T ss_dssp CCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGG-CTTCCEEECCSSCCC-BCCTTGGGCT
T ss_pred cCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhC-CCCCCEEECCCCcCe-ecChhhhcCc
Confidence 35666677777776666666655 77777777777777555555555 777777777777777 4554432 33
Q ss_pred ccccccccCCc
Q 043706 277 NQRMESFSGNV 287 (586)
Q Consensus 277 ~~~~~~~~~n~ 287 (586)
.+..+.+.+|.
T Consensus 265 ~L~~L~l~~N~ 275 (332)
T 2ft3_A 265 LLQVVYLHTNN 275 (332)
T ss_dssp TCCEEECCSSC
T ss_pred cCCEEECCCCC
Confidence 44445555553
No 21
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.90 E-value=1.8e-23 Score=224.89 Aligned_cols=204 Identities=16% Similarity=0.149 Sum_probs=175.9
Q ss_pred CccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCC
Q 043706 67 SWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNN 146 (586)
Q Consensus 67 ~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 146 (586)
.|..|.|...+++.+|.... .+++.|+|++|.+.+..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~-~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIP-TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCC-CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 47899999999999998765 68999999999999999999999999999999999999988999999999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCCc
Q 043706 147 AISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPL 223 (586)
Q Consensus 147 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~ 223 (586)
++++..+..|.++++|++|+|++|++++..|..|.++++|+.|+|++|.+++..+..| ++|+.|+|++|.+++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 9997777788999999999999999999889999999999999999999988777654 7889999999999876665
Q ss_pred CCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCC
Q 043706 224 DFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGA 272 (586)
Q Consensus 224 ~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~ 272 (586)
.+.. ++|+.|+|++|.+.+..+..+.. +++|+.|++++|++.+.+|..
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~-l~~L~~L~l~~~~~~~~~~~~ 219 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKR-LYRLKVLEISHWPYLDTMTPN 219 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCS-CTTCCEEEEECCTTCCEECTT
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhccc-CcccceeeCCCCccccccCcc
Confidence 5665 78888888888887655445544 777888888777766665543
No 22
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=5.4e-23 Score=201.92 Aligned_cols=179 Identities=21% Similarity=0.232 Sum_probs=164.9
Q ss_pred CCC--CccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEE
Q 043706 64 TPC--SWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVL 141 (586)
Q Consensus 64 ~~C--~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 141 (586)
+.| .|..+.|.+.+++.+|.... ..++.|+|++|.+.+..+..|..+++|++|+|++|.|++..|..|..+++|++|
T Consensus 10 C~C~~~~~~l~~~~~~l~~~p~~~~-~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 88 (251)
T 3m19_A 10 CTCNEGKKEVDCQGKSLDSVPSGIP-ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTL 88 (251)
T ss_dssp SEEEGGGTEEECTTCCCSSCCSCCC-TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred eEcCCCCeEEecCCCCccccCCCCC-CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEE
Confidence 456 58889999999999998776 689999999999999999999999999999999999999888889999999999
Q ss_pred EeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCC
Q 043706 142 SLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFN 218 (586)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~ 218 (586)
+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.|++..+.. +++|+.|+|++|+|+
T Consensus 89 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 168 (251)
T 3m19_A 89 GLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168 (251)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCC
Confidence 99999999888889999999999999999999877778899999999999999999777654 489999999999999
Q ss_pred CcCCcCCCC-CcccEEEcccCcCCCc
Q 043706 219 GSLPLDFGG-GNLRYLNLSYNKISGS 243 (586)
Q Consensus 219 ~~~p~~~~~-~~L~~L~ls~N~l~g~ 243 (586)
+..+..+.. ++|++|+|++|.+++.
T Consensus 169 ~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 169 SVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 888878877 8999999999999876
No 23
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=1.1e-22 Score=204.08 Aligned_cols=195 Identities=23% Similarity=0.176 Sum_probs=144.9
Q ss_pred CCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeC
Q 043706 66 CSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSN 145 (586)
Q Consensus 66 C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 145 (586)
++...+.|...+++.+|.... .+++.|+|++|.+.+..+..|..+++|+.|+|++|.|++..+ ...+++|++|+|++
T Consensus 10 ~~l~~l~~~~~~l~~ip~~~~-~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~ 86 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTALPPDLP-KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSH 86 (290)
T ss_dssp TTCCEEECTTSCCSSCCSCCC-TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCS
T ss_pred CCccEEECCCCCCCcCCCCCC-CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCC
Confidence 345667787777777776655 678888888888888777788888888888888888875433 26778888888888
Q ss_pred CCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCC
Q 043706 146 NAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLP 222 (586)
Q Consensus 146 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p 222 (586)
|+|+ .+|..+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+.. +++|+.|+|++|+|++..+
T Consensus 87 N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 165 (290)
T 1p9a_G 87 NQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPA 165 (290)
T ss_dssp SCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCT
T ss_pred CcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCH
Confidence 8887 67777788888888888888888776777888888888888888887655543 3677777777777775555
Q ss_pred cCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCc
Q 043706 223 LDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLT 266 (586)
Q Consensus 223 ~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~ 266 (586)
..|.. ++|++|+|++|+|+ .+|..++. +++|+.|+|++|++.
T Consensus 166 ~~~~~l~~L~~L~L~~N~l~-~ip~~~~~-~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 166 GLLNGLENLDTLLLQENSLY-TIPKGFFG-SHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTTTCTTCCEEECCSSCCC-CCCTTTTT-TCCCSEEECCSCCBC
T ss_pred HHhcCcCCCCEEECCCCcCC-ccChhhcc-cccCCeEEeCCCCcc
Confidence 55554 67777777777776 66766666 667777777777665
No 24
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.9e-23 Score=202.20 Aligned_cols=212 Identities=18% Similarity=0.251 Sum_probs=173.5
Q ss_pred CCCCc-ccee--eCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCC-CCCCCCccccCCCCCc
Q 043706 64 TPCSW-TGVT--CTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNF-FNGSLPLSIFSATELQ 139 (586)
Q Consensus 64 ~~C~w-~gv~--C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~ 139 (586)
|.|.+ .++. |.+ ++.+|. .. .+++.|+|++|++.+..+..|..+++|++|+|++|. +++..+..|..+++|+
T Consensus 8 C~C~~~~~~~v~c~~--l~~ip~-~~-~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~ 83 (239)
T 2xwt_C 8 CECHQEEDFRVTCKD--IQRIPS-LP-PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVT 83 (239)
T ss_dssp CSEEECSTTEEEECS--CSSCCC-CC-TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCC
T ss_pred CeeCCCCcceeEccC--ccccCC-CC-CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCc
Confidence 44543 5554 976 788888 44 589999999999999888899999999999999997 8877777899999999
Q ss_pred EEEeeC-CCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCc---EEecccc-cCCcCCCCC---CCCCc-EE
Q 043706 140 VLSLSN-NAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLT---VVSLRSN-YFSGSIPSG---FTSVE-VL 210 (586)
Q Consensus 140 ~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~g~~p~~---l~~L~-~L 210 (586)
+|+|++ |++++..+..|.++++|++|+|++|++++ +|. |..+++|+ .|++++| .+++..+.. +++|+ .|
T Consensus 84 ~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L 161 (239)
T 2xwt_C 84 HIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTL 161 (239)
T ss_dssp EEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEE
T ss_pred EEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEE
Confidence 999999 99998777889999999999999999996 676 88899998 9999999 998766654 47889 99
Q ss_pred ecccCCCCCcCCcCCCCCcccEEEcccCc-CCCcCcHHHHhcC-CCCcEEEccCCCCcccCCCCCcCccccccccc
Q 043706 211 DLSSNLFNGSLPLDFGGGNLRYLNLSYNK-ISGSISPEFAKRI-PQNVTIDLSFNNLTGAIPGALPLVNQRMESFS 284 (586)
Q Consensus 211 ~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~-l~g~ip~~~~~~l-~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~ 284 (586)
+|++|.++...+..+..++|+.|+|++|+ ++ .+|...+..+ ++|+.|||++|++++..+. .+..+..+.+.
T Consensus 162 ~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~ 234 (239)
T 2xwt_C 162 KLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIAR 234 (239)
T ss_dssp ECCSCCCCEECTTTTTTCEEEEEECTTCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECT
T ss_pred EcCCCCCcccCHhhcCCCCCCEEEcCCCCCcc-cCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeecc
Confidence 99999999444444555899999999995 88 5555544448 9999999999999965544 23344444433
No 25
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.90 E-value=3.8e-23 Score=206.90 Aligned_cols=200 Identities=22% Similarity=0.187 Sum_probs=173.9
Q ss_pred ceeeCCCCCCCcCC--CCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCC-CCCCCCccccCCCCCcEEEeeCC
Q 043706 70 GVTCTQIDATTIPG--SPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNF-FNGSLPLSIFSATELQVLSLSNN 146 (586)
Q Consensus 70 gv~C~~~~~~~ip~--~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N 146 (586)
.+.......+.++. ...+.+++.|+|++|.+.+..+..|..+++|++|+|++|. +....|..+..+++|++|+|++|
T Consensus 36 ~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n 115 (285)
T 1ozn_A 36 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC 115 (285)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCC
Confidence 33344444455553 2356799999999999999989999999999999999997 88777889999999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCc
Q 043706 147 AISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPL 223 (586)
Q Consensus 147 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~ 223 (586)
.+++..|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+.. +++|+.|+|++|.+++..|.
T Consensus 116 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 195 (285)
T 1ozn_A 116 GLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPH 195 (285)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred cCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHh
Confidence 999988999999999999999999999887778999999999999999999766544 48999999999999999999
Q ss_pred CCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCC
Q 043706 224 DFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIP 270 (586)
Q Consensus 224 ~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip 270 (586)
.+.. ++|+.|+|++|++++..+..+.. +++|+.|+|++|++.+..+
T Consensus 196 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 196 AFRDLGRLMTLYLFANNLSALPTEALAP-LRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCHHHHTT-CTTCCEEECCSSCEECSGG
T ss_pred HccCcccccEeeCCCCcCCcCCHHHccc-CcccCEEeccCCCccCCCC
Confidence 8887 99999999999999654444555 9999999999999986554
No 26
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.89 E-value=5e-23 Score=225.38 Aligned_cols=202 Identities=21% Similarity=0.224 Sum_probs=182.6
Q ss_pred CCCCccceeeC--CCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEE
Q 043706 64 TPCSWTGVTCT--QIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVL 141 (586)
Q Consensus 64 ~~C~w~gv~C~--~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 141 (586)
..|.|.|+ |+ ..+++.+|.... .+++.|+|++|.+.+..|..|..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 2 ~~C~~~~~-c~~~~~~l~~ip~~~~-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 79 (549)
T 2z81_A 2 LSCDASGV-CDGRSRSFTSIPSGLT-AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHL 79 (549)
T ss_dssp CEECTTSE-EECTTSCCSSCCSCCC-TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCCce-EECCCCccccccccCC-CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEE
Confidence 35999998 76 456888998665 789999999999999999999999999999999999999889999999999999
Q ss_pred EeeCCCCCCCCccccCCCCCCcEEEccCCCCCC-CCchhcCCCCCCcEEecccccCCcCCCC-C---CCCCcEEecccCC
Q 043706 142 SLSNNAISGELPDLIGQIPRLQLLNLSVNALAG-KVPRNLTAVKSLTVVSLRSNYFSGSIPS-G---FTSVEVLDLSSNL 216 (586)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~~p~-~---l~~L~~L~Ls~N~ 216 (586)
+|++|++++..|..|+++++|++|+|++|.+++ ..|..++++++|+.|++++|.+.+.+|. . +++|++|+|++|.
T Consensus 80 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 80 DLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp ECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 999999999888889999999999999999997 4678899999999999999996556653 3 5889999999999
Q ss_pred CCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCccc
Q 043706 217 FNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGA 268 (586)
Q Consensus 217 l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ 268 (586)
+++..|..+.. ++|+.|++++|.+. .+|..+...+++|+.|++++|++++.
T Consensus 160 l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 160 LRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred ccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 99999999988 99999999999986 77777766699999999999999985
No 27
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=1.9e-22 Score=202.38 Aligned_cols=200 Identities=21% Similarity=0.211 Sum_probs=172.7
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|++++++++. +|..+. ++|+.|+|++|.|++..|..|..+++|++|+|++|.|++..+. +.+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCCEEE
Confidence 3678999999999985 555553 7899999999999988899999999999999999999964433 8899999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCC
Q 043706 167 LSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISG 242 (586)
Q Consensus 167 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g 242 (586)
|++|+++ .+|..+..+++|+.|+|++|+|++..+.. +++|++|+|++|+|++..+..|.. ++|+.|+|++|+|+
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 161 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT- 161 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-
Confidence 9999998 78889999999999999999999777655 478999999999999877777766 89999999999999
Q ss_pred cCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCccccCCC
Q 043706 243 SISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNVELCGKP 293 (586)
Q Consensus 243 ~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lc~~~ 293 (586)
.+|..++..+++|+.|+|++|+|+...+..+....+..+.+.+|++.|+|.
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred ccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 667666555999999999999999655555556667778889999988764
No 28
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.89 E-value=4.2e-24 Score=216.96 Aligned_cols=180 Identities=27% Similarity=0.376 Sum_probs=130.3
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCC-CCcEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIP-RLQLL 165 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L 165 (586)
+.+++.|+|++|.+.+.+|..|..+++|++|+|++|.+++.+|..+..+++|++|+|++|++++.+|..++.++ +|++|
T Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L 179 (313)
T 1ogq_A 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSM 179 (313)
T ss_dssp CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEE
T ss_pred CCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEE
Confidence 45566666666666666666666666666666666666655565555566666666666655555555555554 45554
Q ss_pred -----------------------EccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCC--CCCCCcEEecccCCCCCc
Q 043706 166 -----------------------NLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPS--GFTSVEVLDLSSNLFNGS 220 (586)
Q Consensus 166 -----------------------~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~--~l~~L~~L~Ls~N~l~~~ 220 (586)
+|++|.+++.+|..|..+++|+.|+|++|.+++.+|. .+++|++|+|++|.+++.
T Consensus 180 ~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~ 259 (313)
T 1ogq_A 180 TISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGT 259 (313)
T ss_dssp ECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEEC
T ss_pred ECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCc
Confidence 5555555555666677778888888888888776664 358999999999999999
Q ss_pred CCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCC-Cccc
Q 043706 221 LPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNN-LTGA 268 (586)
Q Consensus 221 ~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~g~ 268 (586)
+|..+.. ++|++|+|++|+++|.+|.. .. +++|+.|++++|+ ++|.
T Consensus 260 ~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~-l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 260 LPQGLTQLKFLHSLNVSFNNLCGEIPQG-GN-LQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSEEEEECCCS-TT-GGGSCGGGTCSSSEEEST
T ss_pred CChHHhcCcCCCEEECcCCcccccCCCC-cc-ccccChHHhcCCCCccCC
Confidence 9999987 99999999999999999987 44 9999999999998 6664
No 29
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.89 E-value=1.1e-22 Score=225.10 Aligned_cols=199 Identities=22% Similarity=0.183 Sum_probs=140.3
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|+|++|.+.+..+..|+.+++|++|+|++|.|++..|..|..+++|++|+|++|.|++..+..|+++++|++|+
T Consensus 74 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 74 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 153 (597)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEE
Confidence 46788999999999988888999999999999999999988888889999999999999999976667788999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCc-C------------------------
Q 043706 167 LSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGS-L------------------------ 221 (586)
Q Consensus 167 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~-~------------------------ 221 (586)
|++|.+++..|..|+++++|+.|+|++|.+++..+..+++|+.|++++|.+++. .
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~ 233 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 233 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSC
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCC
Confidence 999999988888899999999999999998876544455544444444444321 0
Q ss_pred -------------CcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCC
Q 043706 222 -------------PLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGN 286 (586)
Q Consensus 222 -------------p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n 286 (586)
+..+.. ++|+.|+|++|.+++.+|..+.. +++|+.|+|++|.+++..+....+..+..+.+.+|
T Consensus 234 L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N 311 (597)
T 3oja_B 234 LTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVK-MQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHN 311 (597)
T ss_dssp CCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTT-CSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSS
T ss_pred CCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcC-ccCCCEEECCCCCCCCCCcccccCCCCcEEECCCC
Confidence 111222 45555555555555555555544 55555555555555553322222333344444443
No 30
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=2.2e-22 Score=200.10 Aligned_cols=176 Identities=20% Similarity=0.177 Sum_probs=89.5
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|+|++|.+.+. +.+..+++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 62 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 139 (272)
T 3rfs_A 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139 (272)
T ss_dssp CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEE
Confidence 34455555555555442 2455555555555555555544444455555555555555555544444455555555555
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCC
Q 043706 167 LSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISG 242 (586)
Q Consensus 167 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g 242 (586)
|++|++++..+..|..+++|+.|+|++|.+++..+.. +++|+.|+|++|.+++..+..+.. ++|++|+|++|.+.+
T Consensus 140 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 5555555444444455555555555555555444322 245555555555555544444443 555555555555543
Q ss_pred cCcHHHHhcCCCCcEEEccCCCCcccCCCC
Q 043706 243 SISPEFAKRIPQNVTIDLSFNNLTGAIPGA 272 (586)
Q Consensus 243 ~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~ 272 (586)
. +++|+.|+++.|+++|.+|..
T Consensus 220 ~--------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 220 T--------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp C--------TTTTHHHHHHHHHTGGGBBCT
T ss_pred c--------CcHHHHHHHHHHhCCCcccCc
Confidence 3 334444555555555555544
No 31
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.88 E-value=1.7e-22 Score=215.89 Aligned_cols=92 Identities=23% Similarity=0.288 Sum_probs=55.3
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCcc--ccCCCCCcEEEeeCCCCCCCCccc-cCCCCCCc
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLS--IFSATELQVLSLSNNAISGELPDL-IGQIPRLQ 163 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~ 163 (586)
+.+++.|+|++|.+.+..|..|+.+++|++|+|++|.+++.+|.. +..+++|++|+|++|++++..|.. +.++++|+
T Consensus 78 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~ 157 (455)
T 3v47_A 78 LSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFH 157 (455)
T ss_dssp CTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCC
T ss_pred cccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCccc
Confidence 456666666666666666666666666666666666666544443 556666666666666666555544 55566666
Q ss_pred EEEccCCCCCCCCch
Q 043706 164 LLNLSVNALAGKVPR 178 (586)
Q Consensus 164 ~L~L~~N~l~~~~p~ 178 (586)
+|+|++|++++..|.
T Consensus 158 ~L~L~~n~l~~~~~~ 172 (455)
T 3v47_A 158 VLDLTFNKVKSICEE 172 (455)
T ss_dssp EEECTTCCBSCCCTT
T ss_pred EEeCCCCcccccChh
Confidence 666666655554443
No 32
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.88 E-value=2.9e-22 Score=225.18 Aligned_cols=184 Identities=21% Similarity=0.203 Sum_probs=159.0
Q ss_pred CCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEe
Q 043706 64 TPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSL 143 (586)
Q Consensus 64 ~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 143 (586)
|.|.+..|.|...+++.+|.... .+++.|+|++|.+.+..+..|+++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~-~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 80 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLP-TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNL 80 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSC-TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEEC
T ss_pred ceeECCeeECCCCCccccccccC-CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEEC
Confidence 45778889999999999998765 78999999999999988889999999999999999999999999999999999999
Q ss_pred eCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCc
Q 043706 144 SNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGS 220 (586)
Q Consensus 144 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~ 220 (586)
++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|.. +++|++|+|++|.+++.
T Consensus 81 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 160 (680)
T 1ziw_A 81 QHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQAL 160 (680)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCB
T ss_pred CCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccccc
Confidence 999999766668999999999999999999888889999999999999999999887765 47889999999998877
Q ss_pred CCcCCCC---CcccEEEcccCcCCCcCcHHH
Q 043706 221 LPLDFGG---GNLRYLNLSYNKISGSISPEF 248 (586)
Q Consensus 221 ~p~~~~~---~~L~~L~ls~N~l~g~ip~~~ 248 (586)
.+..+.. ++|+.|++++|.+++..|..+
T Consensus 161 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 191 (680)
T 1ziw_A 161 KSEELDIFANSSLKKLELSSNQIKEFSPGCF 191 (680)
T ss_dssp CHHHHGGGTTCEESEEECTTCCCCCBCTTGG
T ss_pred CHHHhhccccccccEEECCCCcccccChhhh
Confidence 7665432 678888888888876665543
No 33
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.88 E-value=3.1e-23 Score=210.45 Aligned_cols=195 Identities=24% Similarity=0.264 Sum_probs=133.1
Q ss_pred CCceEEEEcCCCCCcccCcccc--CCCCCCCEEEccCCCCCCCCCccccCC-----CCCcEEEeeCCCCCCCCccccCCC
Q 043706 87 MFRVISLILPNSQLLGSVTKDL--GLIQHLRHLDLSNNFFNGSLPLSIFSA-----TELQVLSLSNNAISGELPDLIGQI 159 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l--~~l~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l 159 (586)
+.+++.|+|++|.+.+.+|..+ +.+++|++|+|++|.+++. |..+..+ ++|++|+|++|++++..|..|+.+
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 4567777777777777777765 7777777777777777766 6666655 777777777777777777777777
Q ss_pred CCCcEEEccCCCCCCC--Cchhc--CCCCCCcEEecccccCCc--CCCC----CCCCCcEEecccCCCCCcCCc-CCCC-
Q 043706 160 PRLQLLNLSVNALAGK--VPRNL--TAVKSLTVVSLRSNYFSG--SIPS----GFTSVEVLDLSSNLFNGSLPL-DFGG- 227 (586)
Q Consensus 160 ~~L~~L~L~~N~l~~~--~p~~l--~~l~~L~~L~L~~N~l~g--~~p~----~l~~L~~L~Ls~N~l~~~~p~-~~~~- 227 (586)
++|++|+|++|++.+. +|..+ ..+++|+.|+|++|.|++ .++. .+++|++|+|++|++++..|. .+..
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 7777777777777654 23344 677777777777777763 2221 236777777777777776643 2332
Q ss_pred CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCc
Q 043706 228 GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 228 ~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |....+..+..+.+.+|+
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~---~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~ 307 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP---AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNP 307 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC---SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCT
T ss_pred CCCCEEECCCCccC-hhhhhcc---CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCC
Confidence 67777777777777 6666543 5777777777777766 443344455555566654
No 34
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.88 E-value=2.7e-22 Score=210.10 Aligned_cols=197 Identities=23% Similarity=0.220 Sum_probs=137.5
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|+|++|.+.+..+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.++...+..|..+++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 46788888888888887777888888888888888888887788888888888888888888855555578888888888
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCc-CCcCCC----------------CCc
Q 043706 167 LSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGS-LPLDFG----------------GGN 229 (586)
Q Consensus 167 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~-~p~~~~----------------~~~ 229 (586)
|++|.+++..|..|.++++|+.|++++|.+++.....+++|+.|++++|.+++. .|..+. .++
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 227 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVE 227 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeecccccccc
Confidence 888888877777888888888888888888865444455555555555544431 111100 135
Q ss_pred ccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCC
Q 043706 230 LRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGN 286 (586)
Q Consensus 230 L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n 286 (586)
|+.|++++|.+++. ..+.. +++|+.|+|++|.+++.+|..+. ...+..+.+.+|
T Consensus 228 L~~L~l~~n~l~~~--~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 282 (390)
T 3o6n_A 228 LTILKLQHNNLTDT--AWLLN-YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 282 (390)
T ss_dssp CCEEECCSSCCCCC--GGGGG-CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSS
T ss_pred ccEEECCCCCCccc--HHHcC-CCCccEEECCCCcCCCcChhHccccccCCEEECCCC
Confidence 66666666666643 33443 67777777777777766655443 333444444444
No 35
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.88 E-value=3e-22 Score=221.92 Aligned_cols=157 Identities=20% Similarity=0.165 Sum_probs=135.0
Q ss_pred ccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCC
Q 043706 68 WTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNA 147 (586)
Q Consensus 68 w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 147 (586)
+..+.|.+.+++.+|...+ ..++.|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~-~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLP-NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSC-TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCC-CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 5678899999999998776 589999999999999999999999999999999999999889999999999999999999
Q ss_pred CCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcC-CCCC--CCCCcEEecccCCCCCcCCcC
Q 043706 148 ISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGS-IPSG--FTSVEVLDLSSNLFNGSLPLD 224 (586)
Q Consensus 148 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~-~p~~--l~~L~~L~Ls~N~l~~~~p~~ 224 (586)
+++..|..|+++++|++|+|++|++++..|..++++++|++|+|++|.+++. .|.. +++|++|+|++|.+++..|..
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9988899999999999999999999987788899999999999999999873 3432 366677777766666554443
Q ss_pred C
Q 043706 225 F 225 (586)
Q Consensus 225 ~ 225 (586)
+
T Consensus 173 ~ 173 (606)
T 3t6q_A 173 M 173 (606)
T ss_dssp H
T ss_pred h
Confidence 3
No 36
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.88 E-value=7.3e-22 Score=196.59 Aligned_cols=200 Identities=20% Similarity=0.160 Sum_probs=172.4
Q ss_pred eeeCCCCCCCcCC--CCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCC
Q 043706 71 VTCTQIDATTIPG--SPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAI 148 (586)
Q Consensus 71 v~C~~~~~~~ip~--~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (586)
+.......+.++. ...+.+++.|+|++|.+.+..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++
T Consensus 33 L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 112 (276)
T 2z62_A 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112 (276)
T ss_dssp EECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCc
Confidence 3333444444543 23467899999999999998888999999999999999999988889999999999999999999
Q ss_pred CCCCccccCCCCCCcEEEccCCCCCCC-CchhcCCCCCCcEEecccccCCcCCCCCC---CCCc----EEecccCCCCCc
Q 043706 149 SGELPDLIGQIPRLQLLNLSVNALAGK-VPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVE----VLDLSSNLFNGS 220 (586)
Q Consensus 149 ~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~----~L~Ls~N~l~~~ 220 (586)
++..+..+..+++|++|+|++|++++. +|..+.++++|+.|+|++|.+++..+..+ .+|+ .|+|++|.+++.
T Consensus 113 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~ 192 (276)
T 2z62_A 113 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI 192 (276)
T ss_dssp CCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEE
T ss_pred cccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCccccc
Confidence 988887899999999999999999874 69999999999999999999998777665 4455 899999999988
Q ss_pred CCcCCCCCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCC
Q 043706 221 LPLDFGGGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPG 271 (586)
Q Consensus 221 ~p~~~~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~ 271 (586)
.+..+...+|+.|+|++|+++ .+|...+..+++|+.|+|++|++++..|.
T Consensus 193 ~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 193 QPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CTTSSCSCCEEEEECCSSCCS-CCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred CccccCCCcccEEECCCCcee-ecCHhHhcccccccEEEccCCcccccCCc
Confidence 877777789999999999999 45555544599999999999999987764
No 37
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.87 E-value=4.3e-22 Score=220.67 Aligned_cols=202 Identities=18% Similarity=0.143 Sum_probs=177.6
Q ss_pred CCCCCc----cceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCC
Q 043706 63 ATPCSW----TGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATEL 138 (586)
Q Consensus 63 ~~~C~w----~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 138 (586)
.+||.+ ..|.|.+.+++.+|.... .+++.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~-~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIP-SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSC-TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCC-CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 356765 368999999999998766 789999999999999999999999999999999999998889999999999
Q ss_pred cEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCc-CCCCC---CCCCcEEeccc
Q 043706 139 QVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSG-SIPSG---FTSVEVLDLSS 214 (586)
Q Consensus 139 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g-~~p~~---l~~L~~L~Ls~ 214 (586)
++|+|++|.+++..|..|+++++|++|+|++|.+++..+..++++++|++|+|++|.+++ .+|.. +++|++|+|++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 999999999999989999999999999999999998888899999999999999999986 56765 48999999999
Q ss_pred CCCCCcCCcCCCC-Cc----ccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcc
Q 043706 215 NLFNGSLPLDFGG-GN----LRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTG 267 (586)
Q Consensus 215 N~l~~~~p~~~~~-~~----L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g 267 (586)
|.+++..|..+.. .+ +..|++++|.++ .++...+. ..+|+.|++++|.+++
T Consensus 163 n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~~-~~~L~~L~L~~n~~~~ 218 (606)
T 3vq2_A 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQ-GIKLHELTLRGNFNSS 218 (606)
T ss_dssp SCCCEECTTTTHHHHHCTTCCCEEECTTCCCC-EECTTTTT-TCEEEEEEEESCCSCH
T ss_pred CcceecChhhhhhhhccccccceeeccCCCcc-eeCccccc-CceeeeeeccCCccch
Confidence 9999988887776 33 458999999998 45555555 4589999999998863
No 38
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.87 E-value=6e-22 Score=213.05 Aligned_cols=89 Identities=17% Similarity=0.073 Sum_probs=59.4
Q ss_pred CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-Cccccccc
Q 043706 205 TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMES 282 (586)
Q Consensus 205 ~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~ 282 (586)
++|+.|+|++|.+++..+..|.. ++|+.|+|++|++++..|..+.. +++|+.|||++|+|++..+..+. ...+..+.
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 326 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRG-LNYLRVLNVSGNQLTTLEESVFHSVGNLETLI 326 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTT-CTTCCEEECCSSCCSCCCGGGBSCGGGCCEEE
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcC-cccCCEEECCCCcCceeCHhHcCCCcccCEEE
Confidence 45566666666666555555555 67777777777777655655555 77888888888888776655443 34566777
Q ss_pred ccCCccccCCCC
Q 043706 283 FSGNVELCGKPL 294 (586)
Q Consensus 283 ~~~n~~lc~~~~ 294 (586)
+.+|++.|++.+
T Consensus 327 l~~N~l~c~c~~ 338 (477)
T 2id5_A 327 LDSNPLACDCRL 338 (477)
T ss_dssp CCSSCEECSGGG
T ss_pred ccCCCccCccch
Confidence 888888887653
No 39
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=2.4e-21 Score=192.53 Aligned_cols=180 Identities=21% Similarity=0.218 Sum_probs=160.2
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|++++|.+... +.+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..|..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 36789999999998753 4588999999999999999863 4789999999999999999988888899999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCC
Q 043706 167 LSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISG 242 (586)
Q Consensus 167 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g 242 (586)
|++|++++..+..|..+++|++|+|++|.+++..+.. +++|+.|+|++|++++..+..+.. ++|++|+|++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 9999999888888999999999999999999777654 589999999999999888877776 999999999999997
Q ss_pred cCcHHHHhcCCCCcEEEccCCCCcccCCC
Q 043706 243 SISPEFAKRIPQNVTIDLSFNNLTGAIPG 271 (586)
Q Consensus 243 ~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~ 271 (586)
..+..+.. +++|+.|+|++|++.+..|.
T Consensus 196 ~~~~~~~~-l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 196 VPDGVFDR-LTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCTTTTTT-CTTCCEEECCSSCBCCCTTT
T ss_pred cCHHHHhC-CcCCCEEEccCCCccccCcH
Confidence 66655555 99999999999999988774
No 40
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.87 E-value=3.8e-22 Score=221.15 Aligned_cols=205 Identities=21% Similarity=0.226 Sum_probs=161.8
Q ss_pred CCceEEEEcCCCCCcccC--ccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccc-cCCCCCCc
Q 043706 87 MFRVISLILPNSQLLGSV--TKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDL-IGQIPRLQ 163 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~--~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~ 163 (586)
+.+++.|+|++|.+.+.. +..+..+++|++|+|++|.+.+..|..+..+++|++|+|++|.+++..|.. +..+++|+
T Consensus 349 l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 428 (606)
T 3t6q_A 349 LENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLK 428 (606)
T ss_dssp CTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCC
T ss_pred cCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCC
Confidence 456777777777776655 666777778888888888777777777888888888888888887766544 77888888
Q ss_pred EEEccCCCCCCCCchhcCCCCCCcEEecccccCCcC-CC-----CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcc
Q 043706 164 LLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGS-IP-----SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLS 236 (586)
Q Consensus 164 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~-~p-----~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls 236 (586)
+|+|++|.+++..|..+..+++|+.|+|++|.+++. ++ ..+++|+.|+|++|++++..|..|.. ++|+.|+|+
T Consensus 429 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 508 (606)
T 3t6q_A 429 VLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLS 508 (606)
T ss_dssp EEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred EEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECC
Confidence 888888888888888888888888888888888762 22 22578899999999998888888877 889999999
Q ss_pred cCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCCccccCCC
Q 043706 237 YNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGNVELCGKP 293 (586)
Q Consensus 237 ~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~~lc~~~ 293 (586)
+|++++.+|..+.. ++.| .|||++|++++.+|..+. ...+..+.+.+|++.|+++
T Consensus 509 ~N~l~~~~~~~l~~-l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 509 HNRLTSSSIEALSH-LKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp SSCCCGGGGGGGTT-CCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CCccCcCChhHhCc-cccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999888777776 8889 999999999988776543 3456678888999888765
No 41
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.87 E-value=8.5e-22 Score=226.54 Aligned_cols=110 Identities=21% Similarity=0.274 Sum_probs=60.8
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNL 167 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 167 (586)
.+++.|+|++|.+.+..+..|..+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 34555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cCCCCCCCCchhcCCCCCCcEEecccccCC
Q 043706 168 SVNALAGKVPRNLTAVKSLTVVSLRSNYFS 197 (586)
Q Consensus 168 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 197 (586)
++|++++..+..|.++++|+.|+|++|.++
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 375 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALT 375 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCC
Confidence 555555444444555555555555555443
No 42
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.87 E-value=3.7e-22 Score=221.23 Aligned_cols=207 Identities=21% Similarity=0.171 Sum_probs=179.1
Q ss_pred CCCceEEEEcCCCCCccc--CccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCc-cccCCCCCC
Q 043706 86 DMFRVISLILPNSQLLGS--VTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELP-DLIGQIPRL 162 (586)
Q Consensus 86 ~~~~l~~L~L~~n~l~~~--~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L 162 (586)
.+.+++.|+|++|.+.+. ++..+..+++|++|+|++|.+++ +|..+..+++|+.|+|++|.+++..| ..+..+++|
T Consensus 348 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 426 (606)
T 3vq2_A 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL 426 (606)
T ss_dssp CCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC
T ss_pred cCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccC
Confidence 346778888888888776 47788888999999999998874 66889999999999999999998888 689999999
Q ss_pred cEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcC-CCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEccc
Q 043706 163 QLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGS-IPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSY 237 (586)
Q Consensus 163 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~-~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~ 237 (586)
++|++++|.+++..|..+.++++|+.|++++|.+++. +|.. +++|+.|+|++|.+++..|..+.. ++|+.|+|++
T Consensus 427 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 506 (606)
T 3vq2_A 427 LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506 (606)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCC
Confidence 9999999999999999999999999999999999984 6655 489999999999999999988887 9999999999
Q ss_pred CcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcC-c-ccccccccCCccccCCCCC
Q 043706 238 NKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPL-V-NQRMESFSGNVELCGKPLK 295 (586)
Q Consensus 238 N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-~-~~~~~~~~~n~~lc~~~~~ 295 (586)
|++++.+|..+.. +++|+.|||++|+|+. +|..+.. . .+..+.+.+|++.|+++..
T Consensus 507 N~l~~~~~~~~~~-l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 507 NNLLFLDSSHYNQ-LYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp SCCSCEEGGGTTT-CTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred CcCCCcCHHHccC-CCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9999888888877 9999999999999994 5554443 2 3677889999999987753
No 43
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.87 E-value=9.7e-24 Score=214.20 Aligned_cols=195 Identities=21% Similarity=0.283 Sum_probs=162.6
Q ss_pred eEEEEcCCCCC-cccCccccC-------CCCCCCEEEccCCCCCCCCCccc--cCCCCCcEEEeeCCCCCCCCccccCCC
Q 043706 90 VISLILPNSQL-LGSVTKDLG-------LIQHLRHLDLSNNFFNGSLPLSI--FSATELQVLSLSNNAISGELPDLIGQI 159 (586)
Q Consensus 90 l~~L~L~~n~l-~~~~~~~l~-------~l~~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l 159 (586)
++.|+|++|.+ .+.+|..+. .+++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 77788888888 456777665 79999999999999999999987 8999999999999999987 8888777
Q ss_pred -----CCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCC-------CCCCCCCcEEecccCCCCC--cCCcCC
Q 043706 160 -----PRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSI-------PSGFTSVEVLDLSSNLFNG--SLPLDF 225 (586)
Q Consensus 160 -----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~-------p~~l~~L~~L~Ls~N~l~~--~~p~~~ 225 (586)
++|++|+|++|++++..|..|+++++|+.|+|++|.+.+.+ +..+++|++|+|++|+|++ .++..+
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 99999999999999988899999999999999999987652 2567999999999999984 223222
Q ss_pred -CC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCc
Q 043706 226 -GG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 226 -~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
.. ++|++|+|++|++++.+|......+++|+.|+|++|+|+ .+|..+. ..+..+.+.+|.
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L~~L~Ls~N~ 285 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AKLSVLDLSYNR 285 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SEEEEEECCSSC
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CCceEEECCCCC
Confidence 23 799999999999998776444444899999999999999 7777665 566666666664
No 44
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.87 E-value=2.3e-22 Score=216.59 Aligned_cols=196 Identities=22% Similarity=0.174 Sum_probs=136.8
Q ss_pred ceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCC-------------------
Q 043706 89 RVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAIS------------------- 149 (586)
Q Consensus 89 ~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~------------------- 149 (586)
+++.|+|++|.+.+..|..|+.+++|++|+|++|.|++..| +..+++|++|+|++|.|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 56666666666666555666666666666666666665444 555555655555555544
Q ss_pred CCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC----CCCCcEEecccCCCCCcCCcCC
Q 043706 150 GELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG----FTSVEVLDLSSNLFNGSLPLDF 225 (586)
Q Consensus 150 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~----l~~L~~L~Ls~N~l~~~~p~~~ 225 (586)
+..+ ..+++|+.|+|++|.+++..|..++.+++|+.|+|++|.|++..|.. +++|+.|+|++|.|++..+ ..
T Consensus 113 ~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~-~~ 188 (487)
T 3oja_A 113 RVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-QV 188 (487)
T ss_dssp CEEE---CCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-CC
T ss_pred CCCc---cccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc-cc
Confidence 3332 24577888888888888888888888888888888888888876654 4788888888888887633 22
Q ss_pred CCCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCccccCC
Q 043706 226 GGGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNVELCGK 292 (586)
Q Consensus 226 ~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lc~~ 292 (586)
..++|++|+|++|.|++ +|+.+.. +++|+.|||++|+|++.++.......+..+.+.+|+..|++
T Consensus 189 ~l~~L~~L~Ls~N~l~~-~~~~~~~-l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 189 VFAKLKTLDLSSNKLAF-MGPEFQS-AAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp CCTTCCEEECCSSCCCE-ECGGGGG-GTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred cCCCCCEEECCCCCCCC-CCHhHcC-CCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcc
Confidence 34788899999999885 4555665 88899999999999874433333456667777888777653
No 45
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.86 E-value=1.5e-22 Score=225.41 Aligned_cols=190 Identities=23% Similarity=0.378 Sum_probs=167.4
Q ss_pred cCCC-CCCCceEEEEcCCCCCccc-----------------CccccC--CCCCCCEEEccCCCCCCCCCccccCCCCCcE
Q 043706 81 IPGS-PDMFRVISLILPNSQLLGS-----------------VTKDLG--LIQHLRHLDLSNNFFNGSLPLSIFSATELQV 140 (586)
Q Consensus 81 ip~~-~~~~~l~~L~L~~n~l~~~-----------------~~~~l~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 140 (586)
+|.. ..+.+++.|+|++|.++|. +|..++ ++++|++|+|++|.+.|.+|..++++++|++
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 4543 2467899999999999996 999999 9999999999999999999999999999999
Q ss_pred EEeeCCC-CCC-CCccccCCC------CCCcEEEccCCCCCCCCch--hcCCCCCCcEEecccccCCcCCCCCC---CCC
Q 043706 141 LSLSNNA-ISG-ELPDLIGQI------PRLQLLNLSVNALAGKVPR--NLTAVKSLTVVSLRSNYFSGSIPSGF---TSV 207 (586)
Q Consensus 141 L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L 207 (586)
|+|++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|+.|+|++|.++|.+| .+ ++|
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L 355 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKL 355 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEE
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCC
Confidence 9999998 998 899988887 99999999999999 8898 89999999999999999999999 65 789
Q ss_pred cEEecccCCCCCcCCcCCCC-Cc-ccEEEcccCcCCCcCcHHHHh-cCCCCcEEEccCCCCcccCCCCCc
Q 043706 208 EVLDLSSNLFNGSLPLDFGG-GN-LRYLNLSYNKISGSISPEFAK-RIPQNVTIDLSFNNLTGAIPGALP 274 (586)
Q Consensus 208 ~~L~Ls~N~l~~~~p~~~~~-~~-L~~L~ls~N~l~g~ip~~~~~-~l~~L~~L~Ls~N~l~g~ip~~~~ 274 (586)
+.|+|++|+++ .+|..+.. ++ |++|++++|.++ .+|..+.. .+++|+.|++++|++++.+|..+.
T Consensus 356 ~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 356 ASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp SEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred CEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 99999999998 78877777 77 999999999998 78876554 133899999999999998887664
No 46
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.86 E-value=1.5e-21 Score=212.16 Aligned_cols=152 Identities=18% Similarity=0.131 Sum_probs=128.8
Q ss_pred ceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCC
Q 043706 70 GVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAIS 149 (586)
Q Consensus 70 gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (586)
-+.|...+++.+|.... .+++.|+|++|.+.+..|..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+++
T Consensus 4 ~l~ls~n~l~~ip~~~~-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 82 (520)
T 2z7x_B 4 LVDRSKNGLIHVPKDLS-QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV 82 (520)
T ss_dssp EEECTTSCCSSCCCSCC-TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC
T ss_pred eEecCCCCccccccccc-ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee
Confidence 46677777888887666 79999999999999988889999999999999999999888999999999999999999998
Q ss_pred CCCccccCCCCCCcEEEccCCCCCC-CCchhcCCCCCCcEEecccccCCcCCCCCCCCC--cEEecccCCC--CCcCCcC
Q 043706 150 GELPDLIGQIPRLQLLNLSVNALAG-KVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSV--EVLDLSSNLF--NGSLPLD 224 (586)
Q Consensus 150 ~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L--~~L~Ls~N~l--~~~~p~~ 224 (586)
.+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|.+++.....+++| +.|+|++|.+ ++..|..
T Consensus 83 -~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~ 159 (520)
T 2z7x_B 83 -KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEG 159 (520)
T ss_dssp -EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTT
T ss_pred -ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeeccccccccccccc
Confidence 57766 89999999999999987 578999999999999999999886544555666 7777777777 5555544
Q ss_pred C
Q 043706 225 F 225 (586)
Q Consensus 225 ~ 225 (586)
+
T Consensus 160 l 160 (520)
T 2z7x_B 160 L 160 (520)
T ss_dssp T
T ss_pred c
Confidence 3
No 47
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.86 E-value=1.7e-21 Score=218.80 Aligned_cols=205 Identities=19% Similarity=0.211 Sum_probs=144.0
Q ss_pred ceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCC-ccccCCCCCcEEEeeCCC--------------------
Q 043706 89 RVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLP-LSIFSATELQVLSLSNNA-------------------- 147 (586)
Q Consensus 89 ~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~-------------------- 147 (586)
.++.|+|++|.+.+..|..+..+++|+.|+|++|.+++.+| ..+.++++|++|+|++|+
T Consensus 382 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l 461 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLML 461 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEEC
T ss_pred cCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchh
Confidence 45666666666666666666666666666666666655444 345555555555555554
Q ss_pred ----CC--CCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-----------CCCCCCcEE
Q 043706 148 ----IS--GELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-----------SGFTSVEVL 210 (586)
Q Consensus 148 ----l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-----------~~l~~L~~L 210 (586)
++ +.+|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|.+++..+ ..+++|+.|
T Consensus 462 ~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L 541 (680)
T 1ziw_A 462 RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHIL 541 (680)
T ss_dssp TTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEE
T ss_pred ccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEE
Confidence 43 4566777778888888888888887777778888888888888888875321 234778888
Q ss_pred ecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc--CcccccccccCCc
Q 043706 211 DLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP--LVNQRMESFSGNV 287 (586)
Q Consensus 211 ~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~--~~~~~~~~~~~n~ 287 (586)
+|++|+++...+..|.. ++|+.|+|++|+++ .+|...+..+++|+.|+|++|+|++.+|..+. +..+..+.+.+|+
T Consensus 542 ~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~ 620 (680)
T 1ziw_A 542 NLESNGFDEIPVEVFKDLFELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNP 620 (680)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCC
T ss_pred ECCCCCCCCCCHHHcccccCcceeECCCCCCC-cCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCC
Confidence 88888888544445666 88889999999888 56665554588899999999999887776542 4566778889999
Q ss_pred cccCCCC
Q 043706 288 ELCGKPL 294 (586)
Q Consensus 288 ~lc~~~~ 294 (586)
+.|+|+.
T Consensus 621 ~~c~c~~ 627 (680)
T 1ziw_A 621 FDCTCES 627 (680)
T ss_dssp CCBCCCC
T ss_pred cccCCcc
Confidence 9998763
No 48
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.86 E-value=2.2e-21 Score=213.13 Aligned_cols=154 Identities=19% Similarity=0.204 Sum_probs=135.7
Q ss_pred ccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCC
Q 043706 68 WTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNA 147 (586)
Q Consensus 68 w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 147 (586)
...+.|.+.+++.+|.... .+++.|+|++|.+.+..+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 33 ~~~l~ls~~~L~~ip~~~~-~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 111 (562)
T 3a79_B 33 ESMVDYSNRNLTHVPKDLP-PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNR 111 (562)
T ss_dssp CCEEECTTSCCCSCCTTSC-TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CcEEEcCCCCCccCCCCCC-CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCc
Confidence 3678999888999998665 799999999999999988999999999999999999999889999999999999999999
Q ss_pred CCCCCccccCCCCCCcEEEccCCCCCC-CCchhcCCCCCCcEEecccccCCcCCCCCCCCC--cEEecccCCC--CCcCC
Q 043706 148 ISGELPDLIGQIPRLQLLNLSVNALAG-KVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSV--EVLDLSSNLF--NGSLP 222 (586)
Q Consensus 148 l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L--~~L~Ls~N~l--~~~~p 222 (586)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|.+++.....+++| +.|+|++|.+ ++..|
T Consensus 112 l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~ 188 (562)
T 3a79_B 112 LQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGET 188 (562)
T ss_dssp CC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSC
T ss_pred CC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCc
Confidence 99 67766 89999999999999997 467899999999999999999987555556666 8888888888 66555
Q ss_pred cCC
Q 043706 223 LDF 225 (586)
Q Consensus 223 ~~~ 225 (586)
..+
T Consensus 189 ~~l 191 (562)
T 3a79_B 189 ESL 191 (562)
T ss_dssp CEE
T ss_pred ccc
Confidence 443
No 49
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=5.3e-22 Score=201.16 Aligned_cols=195 Identities=22% Similarity=0.211 Sum_probs=158.8
Q ss_pred CceEEEEcCCCCCcccCcccc--CCCCCCCEEEccCCCCCCCCC----ccccCCCCCcEEEeeCCCCCCCCccccCCCCC
Q 043706 88 FRVISLILPNSQLLGSVTKDL--GLIQHLRHLDLSNNFFNGSLP----LSIFSATELQVLSLSNNAISGELPDLIGQIPR 161 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 161 (586)
.+++.|+|++|.+.+.+|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..+..|+.+++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 348899999999999999888 899999999999999998665 44567899999999999999888899999999
Q ss_pred CcEEEccCCCCCCC--Cc--hhcCCCCCCcEEecccccCCcCCC------CCCCCCcEEecccCCCCCcCCcCCCC----
Q 043706 162 LQLLNLSVNALAGK--VP--RNLTAVKSLTVVSLRSNYFSGSIP------SGFTSVEVLDLSSNLFNGSLPLDFGG---- 227 (586)
Q Consensus 162 L~~L~L~~N~l~~~--~p--~~l~~l~~L~~L~L~~N~l~g~~p------~~l~~L~~L~Ls~N~l~~~~p~~~~~---- 227 (586)
|++|+|++|++.+. ++ ..+..+++|++|+|++|.++...+ ..+++|++|+|++|++++..|..+..
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999998753 22 234788999999999999973211 23589999999999999988877765
Q ss_pred CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCc
Q 043706 228 GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 228 ~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
++|++|+|++|+|+ .+|..+ .++|+.|||++|+|++. |....+..+..+.+.+|+
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~---~~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~ 305 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGL---PAKLRVLDLSSNRLNRA-PQPDELPEVDNLTLDGNP 305 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCC---CSCCSCEECCSCCCCSC-CCTTSCCCCSCEECSSTT
T ss_pred CcCCEEECCCCCCC-chhhhh---cCCCCEEECCCCcCCCC-chhhhCCCccEEECcCCC
Confidence 58999999999998 778765 37899999999999974 322334555666677775
No 50
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.5e-21 Score=199.64 Aligned_cols=208 Identities=17% Similarity=0.130 Sum_probs=175.6
Q ss_pred CCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCc-cccCCCCCcE-E
Q 043706 64 TPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPL-SIFSATELQV-L 141 (586)
Q Consensus 64 ~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~-L 141 (586)
|-|+|..|.|.+.+++.||.... .+++.|+|++|+|+...+..|.++++|++|+|++|.+.+.+|. .|.++++|++ +
T Consensus 7 C~C~~~~v~C~~~~Lt~iP~~l~-~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 7 CHCSNRVFLCQESKVTEIPSDLP-RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp SEEETTEEEEESTTCCSCCTTCC-TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred cEeeCCEEEecCCCCCccCcCcC-CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 55889999999999999998775 6899999999999987778899999999999999999877764 6788988775 6
Q ss_pred EeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEeccc-ccCCcCCCCCC----CCCcEEecccCC
Q 043706 142 SLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRS-NYFSGSIPSGF----TSVEVLDLSSNL 216 (586)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~g~~p~~l----~~L~~L~Ls~N~ 216 (586)
+++.|+|+...|..|..+++|++|++++|++++..+..+....++..|++.+ |++....+..| ..++.|+|++|+
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred cccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 7788999988899999999999999999999987777788888899999976 45664444443 468899999999
Q ss_pred CCCcCCcCCCCCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCC
Q 043706 217 FNGSLPLDFGGGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGA 272 (586)
Q Consensus 217 l~~~~p~~~~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~ 272 (586)
|+...+..|...+|+.|++++|+..+.||...+..+++|+.|||++|+|+...+..
T Consensus 166 i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~ 221 (350)
T 4ay9_X 166 IQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG 221 (350)
T ss_dssp CCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS
T ss_pred ccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh
Confidence 99766666666899999998755555899877666999999999999999665544
No 51
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.86 E-value=1.2e-20 Score=192.99 Aligned_cols=209 Identities=18% Similarity=0.185 Sum_probs=169.2
Q ss_pred CCCCCcCC--CCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCc
Q 043706 76 IDATTIPG--SPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELP 153 (586)
Q Consensus 76 ~~~~~ip~--~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p 153 (586)
...+.++. ...+.+++.|+|++|.+.+..|..|+.+++|++|+|++|.++ .+|..+. ++|++|+|++|++++..+
T Consensus 64 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~ 140 (332)
T 2ft3_A 64 NDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPK 140 (332)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCS
T ss_pred CcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCH
Confidence 33445543 345788999999999999999999999999999999999998 6676665 899999999999998777
Q ss_pred cccCCCCCCcEEEccCCCCC--CCCchhcCCC--------------------CCCcEEecccccCCcCCCCCC---CCCc
Q 043706 154 DLIGQIPRLQLLNLSVNALA--GKVPRNLTAV--------------------KSLTVVSLRSNYFSGSIPSGF---TSVE 208 (586)
Q Consensus 154 ~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l--------------------~~L~~L~L~~N~l~g~~p~~l---~~L~ 208 (586)
..|..+++|+.|++++|.++ +..|..+..+ ++|+.|+|++|.+++..+..+ ++|+
T Consensus 141 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~ 220 (332)
T 2ft3_A 141 GVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLY 220 (332)
T ss_dssp GGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCS
T ss_pred hHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCC
Confidence 78999999999999999985 3555555544 466777777777776665544 7899
Q ss_pred EEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcC-------ccccc
Q 043706 209 VLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPL-------VNQRM 280 (586)
Q Consensus 209 ~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~-------~~~~~ 280 (586)
.|+|++|.+++..+..+.. ++|+.|+|++|+++ .+|..+.. +++|+.|+|++|++++..+..+.. ..+..
T Consensus 221 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~-l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~ 298 (332)
T 2ft3_A 221 RLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD-LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNG 298 (332)
T ss_dssp CCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG-CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSE
T ss_pred EEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc-CccCCEEECCCCCCCccChhHccccccccccccccc
Confidence 9999999999988877877 99999999999999 89988877 999999999999999877765532 23445
Q ss_pred ccccCCccc
Q 043706 281 ESFSGNVEL 289 (586)
Q Consensus 281 ~~~~~n~~l 289 (586)
+.+.+|+..
T Consensus 299 L~l~~N~~~ 307 (332)
T 2ft3_A 299 ISLFNNPVP 307 (332)
T ss_dssp EECCSSSSC
T ss_pred eEeecCccc
Confidence 666677654
No 52
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.85 E-value=1.2e-20 Score=208.72 Aligned_cols=202 Identities=19% Similarity=0.100 Sum_probs=153.8
Q ss_pred CCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEE
Q 043706 86 DMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLL 165 (586)
Q Consensus 86 ~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 165 (586)
.+.+++.|+|++|.+.+..|..|+.+++|++|+|++|.|++..+..|..+++|++|+|++|.+++..|..|+.+++|++|
T Consensus 97 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 176 (597)
T 3oja_B 97 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 176 (597)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEE
Confidence 46788999999999999888888999999999999999986666667889999999999999998888889999999999
Q ss_pred EccCCCCCCCCc-----------------------------------------------------------hhcCCCCCC
Q 043706 166 NLSVNALAGKVP-----------------------------------------------------------RNLTAVKSL 186 (586)
Q Consensus 166 ~L~~N~l~~~~p-----------------------------------------------------------~~l~~l~~L 186 (586)
+|++|.+++..+ ..+..+++|
T Consensus 177 ~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~~~~l~~l~~L 256 (597)
T 3oja_B 177 QLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGL 256 (597)
T ss_dssp ECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCCCGGGGGCTTC
T ss_pred ECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCCChhhccCCCC
Confidence 999888875322 224455666
Q ss_pred cEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccC
Q 043706 187 TVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSF 262 (586)
Q Consensus 187 ~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~ 262 (586)
+.|+|++|.+++..|.. +++|+.|+|++|.+++. |..+.. ++|+.|+|++|.++ .+|..+.. +++|+.|+|++
T Consensus 257 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~-l~~L~~L~L~~ 333 (597)
T 3oja_B 257 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQ-FDRLENLYLDH 333 (597)
T ss_dssp SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHH-HTTCSEEECCS
T ss_pred CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCC-ccCccccc-CCCCCEEECCC
Confidence 77777777776666654 36677777777777753 444443 77888888888887 67777766 88888888888
Q ss_pred CCCcccCCCCCcCcccccccccCCccccCC
Q 043706 263 NNLTGAIPGALPLVNQRMESFSGNVELCGK 292 (586)
Q Consensus 263 N~l~g~ip~~~~~~~~~~~~~~~n~~lc~~ 292 (586)
|+|++..+.. +..+..+.+.+|++.|.+
T Consensus 334 N~l~~~~~~~--~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 334 NSIVTLKLST--HHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp SCCCCCCCCT--TCCCSEEECCSSCEEHHH
T ss_pred CCCCCcChhh--cCCCCEEEeeCCCCCChh
Confidence 8887664333 345566777888877754
No 53
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.85 E-value=2.6e-21 Score=214.93 Aligned_cols=194 Identities=23% Similarity=0.164 Sum_probs=165.6
Q ss_pred ceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCC
Q 043706 70 GVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAIS 149 (586)
Q Consensus 70 gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (586)
.|.|...+++.||...+ ..++.|+|++|.|++..+.+|.++++|++|+|++|.|++..|.+|.++++|++|+|++|+|+
T Consensus 35 ~~~c~~~~l~~vP~~lp-~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~ 113 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLP-FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 113 (635)
T ss_dssp EEECTTSCCSSCCSSSC-TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EEECCCCCcCccCCCCC-cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC
Confidence 57899999999998876 68999999999999988899999999999999999999888889999999999999999999
Q ss_pred CCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcC-CCCC---CCCCcEEecccCCCCCcCCcCC
Q 043706 150 GELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGS-IPSG---FTSVEVLDLSSNLFNGSLPLDF 225 (586)
Q Consensus 150 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~-~p~~---l~~L~~L~Ls~N~l~~~~p~~~ 225 (586)
+..+..|.++++|++|+|++|++++..+..|+++++|++|+|++|.+++. +|.. +++|++|+|++|+|++..+..+
T Consensus 114 ~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 193 (635)
T 4g8a_A 114 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDL 193 (635)
T ss_dssp EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGG
T ss_pred CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccc
Confidence 88888899999999999999999988778899999999999999999763 4544 5889999999999998888776
Q ss_pred CC-----CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCc
Q 043706 226 GG-----GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLT 266 (586)
Q Consensus 226 ~~-----~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~ 266 (586)
.. ..+..++++.|.++ .++..... ...+..+++++|...
T Consensus 194 ~~L~~l~~~~~~~~ls~n~l~-~i~~~~~~-~~~~~~l~l~~n~~~ 237 (635)
T 4g8a_A 194 RVLHQMPLLNLSLDLSLNPMN-FIQPGAFK-EIRLHKLTLRNNFDS 237 (635)
T ss_dssp HHHHTCTTCCCEEECTTCCCC-EECTTTTT-TCEEEEEEEESCCSS
T ss_pred cchhhhhhhhhhhhcccCccc-ccCccccc-chhhhhhhhhccccc
Confidence 54 23456888888887 34444433 445566777776554
No 54
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.85 E-value=2.5e-21 Score=222.68 Aligned_cols=203 Identities=19% Similarity=0.219 Sum_probs=180.6
Q ss_pred ccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCC-CccccCCCCCcEEEeeCC
Q 043706 68 WTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSL-PLSIFSATELQVLSLSNN 146 (586)
Q Consensus 68 w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N 146 (586)
-.-+.|...+++.+|. . ..+++.|+|++|.+.+..+..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|
T Consensus 6 ~~~~dcs~~~L~~vP~-l-p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 6 GRIAFYRFCNLTQVPQ-V-LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp TEEEEESCCCSSCCCS-S-CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred ceEEEccCCCCCCCCC-C-CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3457898889999998 3 479999999999999999999999999999999999777677 788999999999999999
Q ss_pred CCCCCCccccCCCCCCcEEEccCCCCCCCCchh--cCCCCCCcEEecccccCCcCCCC----CCCCCcEEecccCCCCCc
Q 043706 147 AISGELPDLIGQIPRLQLLNLSVNALAGKVPRN--LTAVKSLTVVSLRSNYFSGSIPS----GFTSVEVLDLSSNLFNGS 220 (586)
Q Consensus 147 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~g~~p~----~l~~L~~L~Ls~N~l~~~ 220 (586)
.+++..|..|.++++|++|+|++|.+++.+|.. |.++++|+.|+|++|.+++..+. .+++|++|+|++|.+++.
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~ 163 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV 163 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee
Confidence 999999999999999999999999999877776 99999999999999999987653 368999999999999999
Q ss_pred CCcCCCC---CcccEEEcccCcCCCcCcHHHHhcCCC------CcEEEccCCCCcccCCCCC
Q 043706 221 LPLDFGG---GNLRYLNLSYNKISGSISPEFAKRIPQ------NVTIDLSFNNLTGAIPGAL 273 (586)
Q Consensus 221 ~p~~~~~---~~L~~L~ls~N~l~g~ip~~~~~~l~~------L~~L~Ls~N~l~g~ip~~~ 273 (586)
.+..+.. ++|+.|+|++|.+.+.+|..+.. +++ |+.|+|++|.+++.+|..+
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~-~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 224 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGK-CMNPFRNMVLEILDVSGNGWTVDITGNF 224 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCS-SSCTTTTCCBSEEBCSSCCSSTTTTSGG
T ss_pred CHHHcccccCCccceEECCCCccccccccchhh-cCCccccCceeEEecCCCcCchhHHHHH
Confidence 8888865 78999999999999888876554 444 9999999999988777543
No 55
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.85 E-value=1.4e-21 Score=197.51 Aligned_cols=181 Identities=19% Similarity=0.285 Sum_probs=159.7
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCC-ccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLP-LSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLL 165 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 165 (586)
..+++.|+|++|.+.+ +|..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+++..+..+..+++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 3566777777777664 56678899999999999999987655 678999999999999999999999999999999999
Q ss_pred EccCCCCCC-CCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcC
Q 043706 166 NLSVNALAG-KVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKI 240 (586)
Q Consensus 166 ~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l 240 (586)
+|++|.+++ .+|..+..+++|+.|+|++|.+++..|..+ ++|+.|+|++|.+++..+..+.. ++|++|+|++|++
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 999999987 688899999999999999999998877664 78999999999999887777776 9999999999999
Q ss_pred CCcCcHHHHhcC-CCCcEEEccCCCCcccC
Q 043706 241 SGSISPEFAKRI-PQNVTIDLSFNNLTGAI 269 (586)
Q Consensus 241 ~g~ip~~~~~~l-~~L~~L~Ls~N~l~g~i 269 (586)
++..|..+.. + ++|+.|+|++|++++..
T Consensus 236 ~~~~~~~~~~-~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 236 MTSKKQELQH-FPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CBCSSSSCCC-CCTTCCEEECTTCCEECSG
T ss_pred cccCHHHHHh-hhccCCEEEccCCCeeccc
Confidence 9988888777 6 59999999999998754
No 56
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.1e-20 Score=182.64 Aligned_cols=160 Identities=21% Similarity=0.236 Sum_probs=124.1
Q ss_pred CCCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEE
Q 043706 62 DATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVL 141 (586)
Q Consensus 62 ~~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 141 (586)
..+.|+|.+|.|...+++.+|.... .+++.|+|++|.+.+..|..|..+++|+.|+|++|.|+...+..|..+++|++|
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~-~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L 93 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIP-TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCC-CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEE
Confidence 3578999999999988888887665 788888888888888888888888888888888888876656667888888888
Q ss_pred EeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcC
Q 043706 142 SLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSL 221 (586)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~ 221 (586)
+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.|++..+..
T Consensus 94 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~------------------ 154 (229)
T 3e6j_A 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA------------------ 154 (229)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT------------------
T ss_pred ECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH------------------
Confidence 88888888777777788888888888888887 67777777777777777777776443332
Q ss_pred CcCCCC-CcccEEEcccCcCCCcC
Q 043706 222 PLDFGG-GNLRYLNLSYNKISGSI 244 (586)
Q Consensus 222 p~~~~~-~~L~~L~ls~N~l~g~i 244 (586)
|.. ++|+.|+|++|.+.+..
T Consensus 155 ---~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 155 ---FDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp ---TTTCTTCCEEECTTSCBCTTB
T ss_pred ---HhCCCCCCEEEeeCCCccCCc
Confidence 322 45666666666666544
No 57
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.85 E-value=3.8e-21 Score=211.22 Aligned_cols=159 Identities=23% Similarity=0.270 Sum_probs=133.8
Q ss_pred cCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCC--CCchhcCCCCCCcEEecccccCCcCCCCC----CCC
Q 043706 133 FSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAG--KVPRNLTAVKSLTVVSLRSNYFSGSIPSG----FTS 206 (586)
Q Consensus 133 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~g~~p~~----l~~ 206 (586)
..+++|++|+|++|++++.+|..++.+++|++|+|++|++++ .+|..+.++++|+.|+|++|.+++.+|.. +++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 567889999999999998889999999999999999999986 34567889999999999999998866653 488
Q ss_pred CcEEecccCCCCCcCCcCCCCCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCC-cCcccccccccC
Q 043706 207 VEVLDLSSNLFNGSLPLDFGGGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGAL-PLVNQRMESFSG 285 (586)
Q Consensus 207 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~~~~~~~~~~~ 285 (586)
|+.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|..++. +++|+.|+|++|+|++..+..+ ....+..+.+.+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~-~~L~~L~L~~N~l~-~ip~~~~~-l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP-PKVKVLDLHNNRIM-SIPKDVTH-LQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC-TTCSEEECCSSCCC-CCCTTTTS-SCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc-CcCCEEECCCCcCc-ccChhhcC-CCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 99999999999988887765 78999999999998 89998885 9999999999999995444323 355667788899
Q ss_pred CccccCCCC
Q 043706 286 NVELCGKPL 294 (586)
Q Consensus 286 n~~lc~~~~ 294 (586)
|++.|++++
T Consensus 507 N~~~c~c~~ 515 (562)
T 3a79_B 507 NPWDCTCPG 515 (562)
T ss_dssp CCBCCCHHH
T ss_pred CCcCCCcch
Confidence 999887653
No 58
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=1.6e-21 Score=221.97 Aligned_cols=186 Identities=21% Similarity=0.289 Sum_probs=159.7
Q ss_pred cCCC-CCCCceEEEEcCCCCCcc-----------------cCccccC--CCCCCCEEEccCCCCCCCCCccccCCCCCcE
Q 043706 81 IPGS-PDMFRVISLILPNSQLLG-----------------SVTKDLG--LIQHLRHLDLSNNFFNGSLPLSIFSATELQV 140 (586)
Q Consensus 81 ip~~-~~~~~l~~L~L~~n~l~~-----------------~~~~~l~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 140 (586)
+|.. ..+.+++.|+|++|.++| .+|+.++ ++++|++|+|++|.+.+.+|..|.++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 5543 246789999999999999 4899988 9999999999999999999999999999999
Q ss_pred EEeeCCC-CCC-CCccccCCCC-------CCcEEEccCCCCCCCCch--hcCCCCCCcEEecccccCCcCCCCC---CCC
Q 043706 141 LSLSNNA-ISG-ELPDLIGQIP-------RLQLLNLSVNALAGKVPR--NLTAVKSLTVVSLRSNYFSGSIPSG---FTS 206 (586)
Q Consensus 141 L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~g~~p~~---l~~ 206 (586)
|+|++|+ ++| .+|..++.++ +|+.|+|++|+++ .+|. .|+++++|+.|+|++|.++ .+| . +++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 998 8887766554 9999999999999 8888 8999999999999999998 777 4 478
Q ss_pred CcEEecccCCCCCcCCcCCCC-Cc-ccEEEcccCcCCCcCcHHHHhcCC--CCcEEEccCCCCcccCCCC
Q 043706 207 VEVLDLSSNLFNGSLPLDFGG-GN-LRYLNLSYNKISGSISPEFAKRIP--QNVTIDLSFNNLTGAIPGA 272 (586)
Q Consensus 207 L~~L~Ls~N~l~~~~p~~~~~-~~-L~~L~ls~N~l~g~ip~~~~~~l~--~L~~L~Ls~N~l~g~ip~~ 272 (586)
|+.|+|++|.++ .+|..+.. ++ |+.|+|++|.++ .+|..+.. ++ +|+.|+|++|+++|.+|..
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~-~~~~~L~~L~Ls~N~l~g~ip~l 663 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNA-KSVYVMGSVDFSYNKIGSEGRNI 663 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCT-TCSSCEEEEECCSSCTTTTSSSC
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhc-cccCCCCEEECcCCcCCCccccc
Confidence 899999999999 88887777 67 999999999998 78866554 44 4999999999999887754
No 59
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=2.7e-21 Score=210.52 Aligned_cols=196 Identities=27% Similarity=0.396 Sum_probs=153.0
Q ss_pred CCCCCCCCCCCC-----Cccce-eeC----------CCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEE
Q 043706 55 LQNWNYDDATPC-----SWTGV-TCT----------QIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLD 118 (586)
Q Consensus 55 l~~W~~~~~~~C-----~w~gv-~C~----------~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 118 (586)
+.+|.. +..+| .|.|+ .|. ..+++.+|.... .+++.|+|++|.|. .+| ..+++|+.|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~lp~~l~-~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~ 106 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLP-PQITVLEITQNALI-SLP---ELPASLEYLD 106 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSCCCSCCC-TTCSEEECCSSCCS-CCC---CCCTTCCEEE
T ss_pred HHHHhc-cCCccccccchhhhccccccCCccEEEeCCCCCCccCHhHc-CCCCEEECcCCCCc-ccc---cccCCCCEEE
Confidence 445754 34577 68888 564 233455666543 67889999999888 466 5678899999
Q ss_pred ccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCc
Q 043706 119 LSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSG 198 (586)
Q Consensus 119 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g 198 (586)
|++|.|++ +|. +.. +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|.|++
T Consensus 107 Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 107 ACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred ccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC
Confidence 99999987 776 655 89999999999987 666 68899999999999986 665 57889999999999987
Q ss_pred CCCCCCCCCcEEecccCCCCCcCCcCCCCCcc-------cEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCC
Q 043706 199 SIPSGFTSVEVLDLSSNLFNGSLPLDFGGGNL-------RYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPG 271 (586)
Q Consensus 199 ~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L-------~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~ 271 (586)
+|...++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..++. +++|+.|+|++|+|++.+|.
T Consensus 175 -lp~l~~~L~~L~Ls~N~L~-~lp~-~~~-~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~-l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 175 -LPELPESLEALDVSTNLLE-SLPA-VPV-RNHHSEETEIFFRCRENRIT-HIPENILS-LDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp -CCCCCTTCCEEECCSSCCS-SCCC-CC---------CCEEEECCSSCCC-CCCGGGGG-SCTTEEEECCSSSCCHHHHH
T ss_pred -cchhhCCCCEEECcCCCCC-chhh-HHH-hhhcccccceEEecCCCcce-ecCHHHhc-CCCCCEEEeeCCcCCCcCHH
Confidence 6653378999999999998 6666 554 77 99999999998 78998888 99999999999999998886
Q ss_pred CCc
Q 043706 272 ALP 274 (586)
Q Consensus 272 ~~~ 274 (586)
.+.
T Consensus 249 ~l~ 251 (571)
T 3cvr_A 249 SLS 251 (571)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 60
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.84 E-value=3.8e-21 Score=209.07 Aligned_cols=201 Identities=22% Similarity=0.271 Sum_probs=167.5
Q ss_pred ceEEEEcCCCCCcccCcccc-----CCCCCCCEEEccCCCCCCCCCc-------------------------c-ccCCCC
Q 043706 89 RVISLILPNSQLLGSVTKDL-----GLIQHLRHLDLSNNFFNGSLPL-------------------------S-IFSATE 137 (586)
Q Consensus 89 ~l~~L~L~~n~l~~~~~~~l-----~~l~~L~~L~Ls~N~l~g~~p~-------------------------~-~~~l~~ 137 (586)
+++.|+|++|.+.|.+|..+ +.+++|+.+++++|.+ .+|. . +..+++
T Consensus 248 ~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 325 (520)
T 2z7x_B 248 TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISP 325 (520)
T ss_dssp SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCC
T ss_pred cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccccchhhCCc
Confidence 67788888888888888777 6776666666666665 3331 1 267899
Q ss_pred CcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCC--CCchhcCCCCCCcEEecccccCCcCCCCC----CCCCcEEe
Q 043706 138 LQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAG--KVPRNLTAVKSLTVVSLRSNYFSGSIPSG----FTSVEVLD 211 (586)
Q Consensus 138 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~g~~p~~----l~~L~~L~ 211 (586)
|++|+|++|++++.+|..++.+++|++|+|++|++++ .+|..+..+++|+.|+|++|.+++.+|.. +++|+.|+
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~ 405 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEE
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEE
Confidence 9999999999999999999999999999999999997 67788999999999999999999866643 48999999
Q ss_pred cccCCCCCcCCcCCCCCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCC-cCcccccccccCCcccc
Q 043706 212 LSSNLFNGSLPLDFGGGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGAL-PLVNQRMESFSGNVELC 290 (586)
Q Consensus 212 Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~~~~~~~~~~~n~~lc 290 (586)
|++|++++.+|..+. ++|+.|+|++|+++ .+|..++. +++|+.|+|++|+|+...+..+ ....+..+.+.+|+..|
T Consensus 406 Ls~N~l~~~~~~~l~-~~L~~L~Ls~N~l~-~ip~~~~~-l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 406 MSSNILTDTIFRCLP-PRIKVLDLHSNKIK-SIPKQVVK-LEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp CCSSCCCGGGGGSCC-TTCCEEECCSSCCC-CCCGGGGG-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CcCCCCCcchhhhhc-ccCCEEECCCCccc-ccchhhhc-CCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcc
Confidence 999999998887776 79999999999999 89998886 9999999999999995443323 34567778889999888
Q ss_pred CCCC
Q 043706 291 GKPL 294 (586)
Q Consensus 291 ~~~~ 294 (586)
++++
T Consensus 483 ~c~~ 486 (520)
T 2z7x_B 483 SCPR 486 (520)
T ss_dssp CHHH
T ss_pred cCCc
Confidence 7653
No 61
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=1.3e-20 Score=181.14 Aligned_cols=153 Identities=24% Similarity=0.270 Sum_probs=128.4
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEE
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLS 142 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 142 (586)
.|.|.|..|.|.+.+++.+|.... .+++.|+|++|.+.+..+..|..+++|+.|+|++|.|++..|..|.++++|++|+
T Consensus 8 ~C~C~~~~v~c~~~~l~~iP~~l~-~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 86 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKGLTEIPTNLP-ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLV 86 (220)
T ss_dssp TSEEETTEEECTTSCCSSCCSSCC-TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEE
T ss_pred CCEECCCEEEcCCCCcCcCCCccC-cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEE
Confidence 456889999999999999998766 7899999999999988888999999999999999999988899999999999999
Q ss_pred eeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCC
Q 043706 143 LSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNL 216 (586)
Q Consensus 143 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~ 216 (586)
|++|+|+...+..|..+++|++|+|++|++++..|..|..+++|+.|+|++|.|++..+..+ ++|+.|+|++|.
T Consensus 87 Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 163 (220)
T 2v9t_B 87 LYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNP 163 (220)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCC
Confidence 99999997766778899999999999999998888889888888888888888886555433 334444444443
No 62
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.84 E-value=2.7e-20 Score=194.84 Aligned_cols=202 Identities=19% Similarity=0.101 Sum_probs=141.1
Q ss_pred CCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEE
Q 043706 86 DMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLL 165 (586)
Q Consensus 86 ~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 165 (586)
.+.+++.|+|++|.+.+..|..|+.+++|++|+|++|.++...+..|..+++|++|+|++|.+++..|..|..+++|++|
T Consensus 91 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 91 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170 (390)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEE
T ss_pred CCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEE
Confidence 35788999999999998888889999999999999999985444456889999999999999988888888889999999
Q ss_pred EccCCCCCCCCchh-----------------------------------------------------------cCCCCCC
Q 043706 166 NLSVNALAGKVPRN-----------------------------------------------------------LTAVKSL 186 (586)
Q Consensus 166 ~L~~N~l~~~~p~~-----------------------------------------------------------l~~l~~L 186 (586)
+|++|++++..... +..+++|
T Consensus 171 ~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l~~l~~L 250 (390)
T 3o6n_A 171 QLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWLLNYPGL 250 (390)
T ss_dssp ECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGGGGCTTC
T ss_pred ECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHHcCCCCc
Confidence 99888887542222 3334555
Q ss_pred cEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccC
Q 043706 187 TVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSF 262 (586)
Q Consensus 187 ~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~ 262 (586)
+.|+|++|.+++..|.. +++|+.|+|++|++++. |..+.. ++|+.|+|++|+++ .+|..+.. +++|+.|+|++
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~-l~~L~~L~L~~ 327 (390)
T 3o6n_A 251 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLL-HVERNQPQ-FDRLENLYLDH 327 (390)
T ss_dssp SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEE-ECSSSCCTTCCEEECCSSCCC-CCGGGHHH-HTTCSEEECCS
T ss_pred cEEECCCCcCCCcChhHccccccCCEEECCCCcCccc-CcccCCCCCCCEEECCCCcce-ecCccccc-cCcCCEEECCC
Confidence 55555555555554433 35566666666666543 333333 66777777777776 56666665 77777777777
Q ss_pred CCCcccCCCCCcCcccccccccCCccccCC
Q 043706 263 NNLTGAIPGALPLVNQRMESFSGNVELCGK 292 (586)
Q Consensus 263 N~l~g~ip~~~~~~~~~~~~~~~n~~lc~~ 292 (586)
|+++..... .+..+..+.+.+|+.-|.+
T Consensus 328 N~i~~~~~~--~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 328 NSIVTLKLS--THHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp SCCCCCCCC--TTCCCSEEECCSSCEEHHH
T ss_pred CccceeCch--hhccCCEEEcCCCCccchh
Confidence 777655322 2345556667777766643
No 63
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.84 E-value=2e-21 Score=197.64 Aligned_cols=194 Identities=24% Similarity=0.193 Sum_probs=132.5
Q ss_pred ceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCC-------------------CcEEEeeCCCCC
Q 043706 89 RVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATE-------------------LQVLSLSNNAIS 149 (586)
Q Consensus 89 ~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~-------------------L~~L~Ls~N~l~ 149 (586)
+++.|+|++|.+.+..|..|..+++|++|+|++|.+++..| +..+++ |++|+|++|+++
T Consensus 35 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~ 112 (317)
T 3o53_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (317)
T ss_dssp GCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCS
T ss_pred CCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccC
Confidence 44455555555555444445555555555555555543332 444444 455555555554
Q ss_pred CCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC----CCCCcEEecccCCCCCcCCcCC
Q 043706 150 GELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG----FTSVEVLDLSSNLFNGSLPLDF 225 (586)
Q Consensus 150 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~----l~~L~~L~Ls~N~l~~~~p~~~ 225 (586)
+..+ ..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..+.. +++|++|+|++|.+++. +...
T Consensus 113 ~~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~ 188 (317)
T 3o53_A 113 RVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQV 188 (317)
T ss_dssp EEEE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCC
T ss_pred CcCc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cccc
Confidence 3332 23677888999999998877778888999999999999998766543 47899999999999865 3333
Q ss_pred CCCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCC-cCcccccccccCCccccC
Q 043706 226 GGGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGAL-PLVNQRMESFSGNVELCG 291 (586)
Q Consensus 226 ~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~~~~~~~~~~~n~~lc~ 291 (586)
..++|++|+|++|+++ .+|..+.. +++|+.|+|++|++++. |..+ ....+..+.+.+|+..|+
T Consensus 189 ~l~~L~~L~Ls~N~l~-~l~~~~~~-l~~L~~L~L~~N~l~~l-~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 189 VFAKLKTLDLSSNKLA-FMGPEFQS-AAGVTWISLRNNKLVLI-EKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CCTTCCEEECCSSCCC-EECGGGGG-GTTCSEEECTTSCCCEE-CTTCCCCTTCCEEECTTCCCBHH
T ss_pred ccccCCEEECCCCcCC-cchhhhcc-cCcccEEECcCCcccch-hhHhhcCCCCCEEEccCCCccCc
Confidence 3488999999999998 45666665 89999999999999964 4444 345667777888887664
No 64
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.84 E-value=4.3e-20 Score=188.72 Aligned_cols=212 Identities=21% Similarity=0.256 Sum_probs=176.7
Q ss_pred eeeCCCCCCCcCC--CCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCC
Q 043706 71 VTCTQIDATTIPG--SPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAI 148 (586)
Q Consensus 71 v~C~~~~~~~ip~--~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (586)
+.......+.++. ...+.+++.|+|++|.+.+..|..|+.+++|++|+|++|.++ .+|..+. ++|++|+|++|.+
T Consensus 57 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l 133 (330)
T 1xku_A 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEI 133 (330)
T ss_dssp EECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCC
T ss_pred EECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcc
Confidence 3344444555554 345789999999999999999999999999999999999998 6676665 7999999999999
Q ss_pred CCCCccccCCCCCCcEEEccCCCCCC--CCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCC
Q 043706 149 SGELPDLIGQIPRLQLLNLSVNALAG--KVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFG 226 (586)
Q Consensus 149 ~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~ 226 (586)
++..+..|.++++|++|+|++|.+.. ..+..+.++++|+.|++++|.++......+++|+.|+|++|.+++..|..+.
T Consensus 134 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~ 213 (330)
T 1xku_A 134 TKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLK 213 (330)
T ss_dssp CBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGT
T ss_pred cccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccCHHHhc
Confidence 98888889999999999999999964 7788899999999999999999864334458999999999999998888887
Q ss_pred C-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCCc
Q 043706 227 G-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGNV 287 (586)
Q Consensus 227 ~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~ 287 (586)
. ++|++|+|++|.+++..+..+.. +++|+.|+|++|+++ .+|..+. ...+..+.+.+|.
T Consensus 214 ~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~ 274 (330)
T 1xku_A 214 GLNNLAKLGLSFNSISAVDNGSLAN-TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNN 274 (330)
T ss_dssp TCTTCCEEECCSSCCCEECTTTGGG-STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSC
T ss_pred CCCCCCEEECCCCcCceeChhhccC-CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCc
Confidence 7 89999999999999766666666 999999999999999 5555443 4455666666665
No 65
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.84 E-value=5.5e-21 Score=197.32 Aligned_cols=221 Identities=16% Similarity=0.195 Sum_probs=176.3
Q ss_pred eeeCCCCCCCcCC--CCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCC
Q 043706 71 VTCTQIDATTIPG--SPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAI 148 (586)
Q Consensus 71 v~C~~~~~~~ip~--~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (586)
+.......+.++. ...+.+++.|+|++|.+.+..+..|+.+++|++|+|++|.+++..+..+..+++|++|+|++|++
T Consensus 57 L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 136 (353)
T 2z80_A 57 LDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPY 136 (353)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCC
T ss_pred EECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCC
Confidence 3344444555554 34578999999999999998889999999999999999999976666689999999999999999
Q ss_pred CCCCc-cccCCCCCCcEEEccCCC-CCCCCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCCc
Q 043706 149 SGELP-DLIGQIPRLQLLNLSVNA-LAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPL 223 (586)
Q Consensus 149 ~~~~p-~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~ 223 (586)
++..+ ..+..+++|++|++++|+ +++..+..|.++++|+.|++++|.+++..|..+ ++|++|+|++|.++...+.
T Consensus 137 ~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 216 (353)
T 2z80_A 137 KTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEI 216 (353)
T ss_dssp SSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHH
T ss_pred cccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhh
Confidence 95444 478999999999999994 776667789999999999999999998877765 6788889998888643322
Q ss_pred CCCC-CcccEEEcccCcCCCc-------------------------------CcHHHHhcCCCCcEEEccCCCCcccCCC
Q 043706 224 DFGG-GNLRYLNLSYNKISGS-------------------------------ISPEFAKRIPQNVTIDLSFNNLTGAIPG 271 (586)
Q Consensus 224 ~~~~-~~L~~L~ls~N~l~g~-------------------------------ip~~~~~~l~~L~~L~Ls~N~l~g~ip~ 271 (586)
.+.. ++|+.|++++|.+++. +|..+.. +++|+.|||++|+++. +|.
T Consensus 217 ~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~-l~~L~~L~Ls~N~l~~-i~~ 294 (353)
T 2z80_A 217 FVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQ-ISGLLELEFSRNQLKS-VPD 294 (353)
T ss_dssp HHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHT-CTTCCEEECCSSCCCC-CCT
T ss_pred hhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhc-ccCCCEEECCCCCCCc-cCH
Confidence 2222 7888888888888763 4555665 9999999999999994 554
Q ss_pred C-C-cCcccccccccCCccccCCC
Q 043706 272 A-L-PLVNQRMESFSGNVELCGKP 293 (586)
Q Consensus 272 ~-~-~~~~~~~~~~~~n~~lc~~~ 293 (586)
. + ....+..+.+.+|+..|+++
T Consensus 295 ~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 295 GIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HHHhcCCCCCEEEeeCCCccCcCC
Confidence 4 2 45667788899999888764
No 66
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=2.6e-20 Score=178.99 Aligned_cols=161 Identities=20% Similarity=0.226 Sum_probs=122.7
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCc-cccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEE
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVT-KDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVL 141 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 141 (586)
.|.|.|..+.|.+..++.+|.... ..++.|+|++|.+.+..+ ..|..+++|+.|+|++|.|++..+..|..+++|++|
T Consensus 8 ~C~C~~~~l~~s~n~l~~iP~~~~-~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 8 KCRCEGTTVDCSNQKLNKIPEHIP-QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TCEEETTEEECCSSCCSSCCSCCC-TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEECCCEeEeCCCCcccCccCCC-CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 355789999998888888887654 456788888888887755 457788888888888888887777778888888888
Q ss_pred EeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcC
Q 043706 142 SLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSL 221 (586)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~ 221 (586)
+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|+.|+|++|.|++..|..|
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~----------------- 149 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAF----------------- 149 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTT-----------------
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHh-----------------
Confidence 888888887777778888888888888888887777778777777777777777775555443
Q ss_pred CcCCCC-CcccEEEcccCcCCCcCc
Q 043706 222 PLDFGG-GNLRYLNLSYNKISGSIS 245 (586)
Q Consensus 222 p~~~~~-~~L~~L~ls~N~l~g~ip 245 (586)
.. ++|+.|+|++|.+++..+
T Consensus 150 ----~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 150 ----DTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ----TTCTTCCEEECCSCCEECSGG
T ss_pred ----cCCCCCCEEEecCcCCcCCCc
Confidence 33 466677777777766554
No 67
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=5.1e-20 Score=175.19 Aligned_cols=173 Identities=18% Similarity=0.147 Sum_probs=151.0
Q ss_pred EEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCC
Q 043706 91 ISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVN 170 (586)
Q Consensus 91 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 170 (586)
+.++.+++++... |..+ .++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCC-CCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 3678888887654 4333 468999999999999877777899999999999999999877778899999999999999
Q ss_pred CCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcH
Q 043706 171 ALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISP 246 (586)
Q Consensus 171 ~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~ 246 (586)
++++..+..|..+++|++|+|++|.|++..+.. +++|+.|+|++|.+++..+..+.. ++|++|+|++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 999877777899999999999999999777654 589999999999999877766776 9999999999999864
Q ss_pred HHHhcCCCCcEEEccCCCCcccCCCCCc
Q 043706 247 EFAKRIPQNVTIDLSFNNLTGAIPGALP 274 (586)
Q Consensus 247 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 274 (586)
+++|+.|+++.|+++|.+|..+.
T Consensus 164 -----~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 164 -----CPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp -----TTTTHHHHHHHHHCTTTBBCTTS
T ss_pred -----CCCHHHHHHHHHhCCceeeccCc
Confidence 67889999999999999998764
No 68
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.83 E-value=2.9e-20 Score=204.21 Aligned_cols=174 Identities=23% Similarity=0.197 Sum_probs=140.2
Q ss_pred cceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCC
Q 043706 69 TGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAI 148 (586)
Q Consensus 69 ~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 148 (586)
..+.|.+.+++.+|.... .+++.|+|++|.+.+..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 10 ~~~~c~~~~l~~ip~~l~-~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 10 ITYQCMELNFYKIPDNLP-FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp TEEECCSSCCSSCCSSSC-SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred cEEEeCCCCccccCCCcc-ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 358899888899998665 6788999999999988888899999999999999999887788888999999999999999
Q ss_pred CCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCc-CCCCC---CCCCcEEecccCCCCCcCCcC
Q 043706 149 SGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSG-SIPSG---FTSVEVLDLSSNLFNGSLPLD 224 (586)
Q Consensus 149 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g-~~p~~---l~~L~~L~Ls~N~l~~~~p~~ 224 (586)
++..|..|.++++|++|+|++|++++..+..++++++|++|+|++|.+++ .+|.. +++|++|++++|.+++..+..
T Consensus 89 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~ 168 (570)
T 2z63_A 89 QSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD 168 (570)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGG
T ss_pred CccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHH
Confidence 88778888889999999999998887666578888888888888888876 45665 467888888888887766655
Q ss_pred CCC-Ccc----cEEEcccCcCCCc
Q 043706 225 FGG-GNL----RYLNLSYNKISGS 243 (586)
Q Consensus 225 ~~~-~~L----~~L~ls~N~l~g~ 243 (586)
+.. .+| ..|++++|.+++.
T Consensus 169 ~~~l~~L~~~~~~L~l~~n~l~~~ 192 (570)
T 2z63_A 169 LRVLHQMPLLNLSLDLSLNPMNFI 192 (570)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEE
T ss_pred ccchhccchhhhhcccCCCCceec
Confidence 544 444 5666666665543
No 69
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.83 E-value=1.8e-20 Score=205.94 Aligned_cols=203 Identities=20% Similarity=0.227 Sum_probs=164.5
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCC--CccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSL--PLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQL 164 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 164 (586)
+.+++.|++++|.+.+..+. ..+++|+.|+|++|.+++.. |..+..+++|++|+|++|.+++..+. +..+++|+.
T Consensus 324 l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~ 400 (570)
T 2z63_A 324 LKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEH 400 (570)
T ss_dssp CSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCE
T ss_pred ccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCE
Confidence 34566666666665555444 67888999999999888654 67788899999999999998865444 889999999
Q ss_pred EEccCCCCCCCCc-hhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCC-CcCCcCCCC-CcccEEEcccC
Q 043706 165 LNLSVNALAGKVP-RNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFN-GSLPLDFGG-GNLRYLNLSYN 238 (586)
Q Consensus 165 L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~-~~~p~~~~~-~~L~~L~ls~N 238 (586)
|++++|.+.+..| ..+.++++|++|++++|.+++..|.. +++|+.|+|++|.++ +.+|..+.. ++|++|+|++|
T Consensus 401 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n 480 (570)
T 2z63_A 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480 (570)
T ss_dssp EECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCC
Confidence 9999999987766 46888999999999999998887765 478999999999998 678888877 89999999999
Q ss_pred cCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCCccccCCC
Q 043706 239 KISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGNVELCGKP 293 (586)
Q Consensus 239 ~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~~lc~~~ 293 (586)
++++..|..+.. +++|+.|+|++|++++.+|..+. ...+..+.+.+|+..|+++
T Consensus 481 ~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 481 QLEQLSPTAFNS-LSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CCCEECTTTTTT-CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccCChhhhhc-ccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 999877877776 89999999999999988877653 4566777888888877665
No 70
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.83 E-value=1.7e-20 Score=205.34 Aligned_cols=198 Identities=22% Similarity=0.224 Sum_probs=166.9
Q ss_pred CceEEEEcCCCCCcccCcccc-CCCCCCCEEEccCCCCCCCCCc---cccCCCCCcEEEeeCCCCCCCCc--cccCCCCC
Q 043706 88 FRVISLILPNSQLLGSVTKDL-GLIQHLRHLDLSNNFFNGSLPL---SIFSATELQVLSLSNNAISGELP--DLIGQIPR 161 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l-~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~ 161 (586)
.+++.|++++|.+. .+|..+ ..+++|++|+|++|.+++.+|. .+..+++|++|+|++|++++..+ ..+..+++
T Consensus 310 ~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~ 388 (549)
T 2z81_A 310 EKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKN 388 (549)
T ss_dssp TTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTT
T ss_pred ccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCC
Confidence 46888999999886 566655 6899999999999999987754 47889999999999999986543 56899999
Q ss_pred CcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCCCcccEEEcccCcCC
Q 043706 162 LQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGGGNLRYLNLSYNKIS 241 (586)
Q Consensus 162 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~ 241 (586)
|++|+|++|+++ .+|..+..+++|++|+|++|.+++......++|++|+|++|+|++.+. ..++|++|+|++|+|+
T Consensus 389 L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~---~l~~L~~L~Ls~N~l~ 464 (549)
T 2z81_A 389 LTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSL---FLPRLQELYISRNKLK 464 (549)
T ss_dssp CCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCC---CCTTCCEEECCSSCCS
T ss_pred CCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcc---cCChhcEEECCCCccC
Confidence 999999999999 789999999999999999999985333334799999999999997541 2279999999999998
Q ss_pred CcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc-CcccccccccCCccccCCC
Q 043706 242 GSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP-LVNQRMESFSGNVELCGKP 293 (586)
Q Consensus 242 g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~~lc~~~ 293 (586)
.+|.. .. +++|+.|||++|++++.+|..+. ...+..+.+.+|++.|+++
T Consensus 465 -~ip~~-~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 465 -TLPDA-SL-FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp -SCCCG-GG-CTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred -cCCCc-cc-CccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 78873 44 99999999999999998887653 5567788899999988765
No 71
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=3e-20 Score=192.41 Aligned_cols=184 Identities=20% Similarity=0.168 Sum_probs=138.5
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccC-CCCCCCEEEccCCCCCCCCCccccCCCCCcEE
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLG-LIQHLRHLDLSNNFFNGSLPLSIFSATELQVL 141 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 141 (586)
.|.|.+..+.|...+++.+|.... ..++.|+|++|.+.+..+..+. .+++|+.|+|++|+|++..+..|..+++|++|
T Consensus 15 ~C~C~~~~l~c~~~~l~~iP~~~~-~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 15 NCLCASNILSCSKQQLPNVPQSLP-SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TCEEETTEEECCSSCCSSCCSSCC-TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEECCCEEEeCCCCcCccCccCC-CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 355789999999888888887665 5688899999999888888887 88999999999999987777888889999999
Q ss_pred EeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcC
Q 043706 142 SLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSL 221 (586)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~ 221 (586)
+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|.|++..+..+..+
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~-------------- 159 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDG-------------- 159 (361)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----------------
T ss_pred ECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCc--------------
Confidence 999999987777788889999999999999988778888888888888888888874332221100
Q ss_pred CcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCC--CcEEEccCCCCc
Q 043706 222 PLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQ--NVTIDLSFNNLT 266 (586)
Q Consensus 222 p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~--L~~L~Ls~N~l~ 266 (586)
.. ++|+.|+|++|+|+ .+|......++. ++.|+|++|++.
T Consensus 160 ----~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 160 ----NKLPKLMLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ------CTTCCEEECCSSCCC-CCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ----ccCCcCCEEECCCCCCC-ccCHHHhhhccHhhcceEEecCCCcc
Confidence 11 46666667777766 344333333665 356666666665
No 72
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=1.3e-19 Score=197.39 Aligned_cols=175 Identities=25% Similarity=0.314 Sum_probs=146.2
Q ss_pred ceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEcc
Q 043706 89 RVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLS 168 (586)
Q Consensus 89 ~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 168 (586)
+++.|+|++|++.+ +|..+ +++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78999999999988 77666 388999999999999 677 457999999999999997 777 665 99999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCCCcccEEEcccCcCCCcCcHHH
Q 043706 169 VNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGGGNLRYLNLSYNKISGSISPEF 248 (586)
Q Consensus 169 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~g~ip~~~ 248 (586)
+|+|++ +|. .+++|+.|+|++|.|++ +|..+++|+.|+|++|.|++ +|. +. ++|++|+|++|+|+ .+|. +
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~L~~-lp~-l~-~~L~~L~Ls~N~L~-~lp~-~ 198 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQLTF-LPE-LP-ESLEALDVSTNLLE-SLPA-V 198 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSC-CCC-CC-TTCCEEECCSSCCS-SCCC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCCCCC-cch-hh-CCCCEEECcCCCCC-chhh-H
Confidence 999997 666 68999999999999997 77778999999999999998 666 66 89999999999998 7777 3
Q ss_pred HhcCCCC-------cEEEccCCCCcccCCC-CCcCcccccccccCCcc
Q 043706 249 AKRIPQN-------VTIDLSFNNLTGAIPG-ALPLVNQRMESFSGNVE 288 (586)
Q Consensus 249 ~~~l~~L-------~~L~Ls~N~l~g~ip~-~~~~~~~~~~~~~~n~~ 288 (586)
. .+| +.|+|++|+|+. +|. ......+..+.+.+|+.
T Consensus 199 ~---~~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 199 P---VRNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp C-----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSC
T ss_pred H---HhhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcC
Confidence 3 266 999999999995 554 44455666677777764
No 73
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.82 E-value=7e-20 Score=194.85 Aligned_cols=180 Identities=20% Similarity=0.221 Sum_probs=137.4
Q ss_pred CCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCcc-----------
Q 043706 86 DMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPD----------- 154 (586)
Q Consensus 86 ~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~----------- 154 (586)
.+.+++.|+|++|.+.+..+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|.++...+.
T Consensus 86 ~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 165 (440)
T 3zyj_A 86 HLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRL 165 (440)
T ss_dssp SCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEe
Confidence 355677777777777766666677777777777777777655555666666666666666666543332
Q ss_pred --------------ccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCC
Q 043706 155 --------------LIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLF 217 (586)
Q Consensus 155 --------------~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l 217 (586)
.|.++++|++|+|++|+++ .+| .+..+++|+.|+|++|.|++..|..| ++|+.|+|++|++
T Consensus 166 ~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 243 (440)
T 3zyj_A 166 DLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQI 243 (440)
T ss_dssp ECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCce
Confidence 4556677777777777776 444 47788999999999999998878765 8899999999999
Q ss_pred CCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCccc
Q 043706 218 NGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGA 268 (586)
Q Consensus 218 ~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ 268 (586)
++..+..|.. ++|+.|+|++|+|+ .+|...+..+++|+.|+|++|++...
T Consensus 244 ~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 244 QVIERNAFDNLQSLVEINLAHNNLT-LLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp CEECTTSSTTCTTCCEEECTTSCCC-CCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred eEEChhhhcCCCCCCEEECCCCCCC-ccChhHhccccCCCEEEcCCCCccCC
Confidence 9999988887 99999999999999 45555545599999999999999743
No 74
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.81 E-value=1e-19 Score=194.22 Aligned_cols=180 Identities=22% Similarity=0.238 Sum_probs=147.3
Q ss_pred CCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCcc-----------
Q 043706 86 DMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPD----------- 154 (586)
Q Consensus 86 ~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~----------- 154 (586)
.+.+++.|+|++|.+.+..+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|.++...+.
T Consensus 97 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 176 (452)
T 3zyi_A 97 HLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRL 176 (452)
T ss_dssp TCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEE
Confidence 467788888888888888888888888888888888888876666788888888888888887744433
Q ss_pred --------------ccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCC
Q 043706 155 --------------LIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLF 217 (586)
Q Consensus 155 --------------~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l 217 (586)
.|..+++|++|+|++|++++. | .+..+++|+.|+|++|.|++..|..| ++|+.|+|++|++
T Consensus 177 ~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l 254 (452)
T 3zyi_A 177 DLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQV 254 (452)
T ss_dssp ECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCC
T ss_pred eCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcC
Confidence 355666777777777777743 3 57788999999999999998878654 8899999999999
Q ss_pred CCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCccc
Q 043706 218 NGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGA 268 (586)
Q Consensus 218 ~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ 268 (586)
++..+..|.. ++|+.|+|++|+|+ .+|...+..+++|+.|+|++|++...
T Consensus 255 ~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 255 SLIERNAFDGLASLVELNLAHNNLS-SLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCS-CCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred ceECHHHhcCCCCCCEEECCCCcCC-ccChHHhccccCCCEEEccCCCcCCC
Confidence 9999988887 99999999999999 45555444599999999999998754
No 75
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.81 E-value=1.9e-19 Score=182.08 Aligned_cols=169 Identities=21% Similarity=0.336 Sum_probs=86.0
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNL 167 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 167 (586)
.+++.|++++|.+... + .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++. + .+..+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEEC
Confidence 3455555555555442 2 35555555555555555553322 55555555555555555532 2 3555555555555
Q ss_pred cCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCc
Q 043706 168 SVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSIS 245 (586)
Q Consensus 168 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip 245 (586)
++|++++. + .+..+++|+.|+|++|.+++..+ ..+++|+.|+|++|.+++..+ +.. ++|+.|++++|++++. +
T Consensus 115 ~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~ 189 (308)
T 1h6u_A 115 TSTQITDV-T-PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDI-S 189 (308)
T ss_dssp TTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G
T ss_pred CCCCCCCc-h-hhcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcC-h
Confidence 55555542 2 25555555555555555554332 123555555555555554322 333 5555555555555532 2
Q ss_pred HHHHhcCCCCcEEEccCCCCcccC
Q 043706 246 PEFAKRIPQNVTIDLSFNNLTGAI 269 (586)
Q Consensus 246 ~~~~~~l~~L~~L~Ls~N~l~g~i 269 (586)
. +.. +++|+.|+|++|++++..
T Consensus 190 ~-l~~-l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 190 P-LAS-LPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp G-GGG-CTTCCEEECTTSCCCBCG
T ss_pred h-hcC-CCCCCEEEccCCccCccc
Confidence 2 222 555555555555555444
No 76
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.80 E-value=3.8e-20 Score=187.52 Aligned_cols=177 Identities=20% Similarity=0.174 Sum_probs=149.5
Q ss_pred CCCCceEEEEcCCCCCcccCc----cccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCC--C--cccc
Q 043706 85 PDMFRVISLILPNSQLLGSVT----KDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGE--L--PDLI 156 (586)
Q Consensus 85 ~~~~~l~~L~L~~n~l~~~~~----~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~ 156 (586)
....+++.|+|++|.+.+..+ ..+..+++|++|+|++|.+.+..|..+..+++|++|+|++|++.+. + +..+
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 193 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCP 193 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCT
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhh
Confidence 346789999999999998665 4556899999999999999999999999999999999999998753 2 2334
Q ss_pred CCCCCCcEEEccCCCCCCCCch----hcCCCCCCcEEecccccCCcCCCCCC------CCCcEEecccCCCCCcCCcCCC
Q 043706 157 GQIPRLQLLNLSVNALAGKVPR----NLTAVKSLTVVSLRSNYFSGSIPSGF------TSVEVLDLSSNLFNGSLPLDFG 226 (586)
Q Consensus 157 ~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~L~~N~l~g~~p~~l------~~L~~L~Ls~N~l~~~~p~~~~ 226 (586)
..+++|++|+|++|+++. ++. .+.++++|++|+|++|.|++..|..+ ++|++|+|++|+|+ .+|..+.
T Consensus 194 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~ 271 (310)
T 4glp_A 194 HKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP 271 (310)
T ss_dssp TSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC
T ss_pred hcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc
Confidence 789999999999999973 333 35788999999999999999877543 69999999999999 6777665
Q ss_pred CCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcc
Q 043706 227 GGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTG 267 (586)
Q Consensus 227 ~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g 267 (586)
++|+.|+|++|+|++. |. +. .+++|+.|+|++|+|+.
T Consensus 272 -~~L~~L~Ls~N~l~~~-~~-~~-~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 272 -AKLRVLDLSSNRLNRA-PQ-PD-ELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp -SCCSCEECCSCCCCSC-CC-TT-SCCCCSCEECSSTTTSC
T ss_pred -CCCCEEECCCCcCCCC-ch-hh-hCCCccEEECcCCCCCC
Confidence 7999999999999963 33 33 48999999999999974
No 77
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.80 E-value=3.5e-20 Score=188.38 Aligned_cols=192 Identities=21% Similarity=0.204 Sum_probs=163.4
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNL 167 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 167 (586)
.++..++++.+.+...+...+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+ +..+++|++|+|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~L 87 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDL 87 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEEC
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEEC
Confidence 356677888888877777777888999999999999999888999999999999999999997665 999999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcH
Q 043706 168 SVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISP 246 (586)
Q Consensus 168 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~ 246 (586)
++|++++.. ..++|+.|++++|.+++..+..+++|+.|+|++|++++..+..+.. ++|++|+|++|.+++..+.
T Consensus 88 s~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 162 (317)
T 3o53_A 88 NNNYVQELL-----VGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFA 162 (317)
T ss_dssp CSSEEEEEE-----ECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGG
T ss_pred cCCcccccc-----CCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHH
Confidence 999998432 3489999999999999988888999999999999999888877876 8999999999999987777
Q ss_pred HHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCc
Q 043706 247 EFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 247 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
.+...+++|+.|+|++|.+++. |.......+..+.+.+|.
T Consensus 163 ~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~ 202 (317)
T 3o53_A 163 ELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNK 202 (317)
T ss_dssp GGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSC
T ss_pred HHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCc
Confidence 7765589999999999999876 333335556666666654
No 78
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.80 E-value=7.6e-19 Score=177.71 Aligned_cols=186 Identities=22% Similarity=0.323 Sum_probs=155.9
Q ss_pred ceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCC
Q 043706 70 GVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAIS 149 (586)
Q Consensus 70 gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (586)
.+.+.....+.++....+.+++.|+|++|.+.+..+ +..+++|++|+|++|.+++. + .+..+++|++|+|++|+++
T Consensus 45 ~L~l~~~~i~~l~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~ 120 (308)
T 1h6u_A 45 TLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQIT 120 (308)
T ss_dssp EEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCC
T ss_pred EEEeeCCCccCchhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCC
Confidence 344444455556655557899999999999988655 99999999999999999864 3 6999999999999999999
Q ss_pred CCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-
Q 043706 150 GELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG- 227 (586)
Q Consensus 150 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~- 227 (586)
+. +. +..+++|++|+|++|++++..+ +..+++|+.|+|++|.+++..+ ..+++|+.|+|++|.+++..+ +..
T Consensus 121 ~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l 194 (308)
T 1h6u_A 121 DV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASL 194 (308)
T ss_dssp CC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGC
T ss_pred Cc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCC
Confidence 74 43 8999999999999999997644 8899999999999999997554 346899999999999997654 544
Q ss_pred CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCccc
Q 043706 228 GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGA 268 (586)
Q Consensus 228 ~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ 268 (586)
++|++|+|++|++++..+ +.. +++|+.|+|++|++++.
T Consensus 195 ~~L~~L~L~~N~l~~~~~--l~~-l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 195 PNLIEVHLKNNQISDVSP--LAN-TSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp TTCCEEECTTSCCCBCGG--GTT-CTTCCEEEEEEEEEECC
T ss_pred CCCCEEEccCCccCcccc--ccC-CCCCCEEEccCCeeecC
Confidence 899999999999996543 554 99999999999999863
No 79
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.79 E-value=4.4e-19 Score=196.99 Aligned_cols=213 Identities=24% Similarity=0.270 Sum_probs=159.8
Q ss_pred cCCCCCCCCCCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCcccc
Q 043706 54 VLQNWNYDDATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIF 133 (586)
Q Consensus 54 ~l~~W~~~~~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 133 (586)
.++.|+. ..|..|....|... . ...+=++.+++. +|..+. +++++|||++|+|++..|.+|.
T Consensus 12 ~~~~~~~--~~p~~~~~c~~~~~------------~-~~~~c~~~~l~~-vP~~lp--~~~~~LdLs~N~i~~l~~~~f~ 73 (635)
T 4g8a_A 12 KLAAANS--SIPESWEPCVEVVP------------N-ITYQCMELNFYK-IPDNLP--FSTKNLDLSFNPLRHLGSYSFF 73 (635)
T ss_dssp ---------------CCSEEEET------------T-TEEECTTSCCSS-CCSSSC--TTCCEEECTTSCCCEECTTTTT
T ss_pred hhhcccC--CCCCCCCCccccCC------------C-CEEECCCCCcCc-cCCCCC--cCCCEEEeeCCCCCCCCHHHHh
Confidence 4566653 34666765555431 1 134555556654 565543 4799999999999988888999
Q ss_pred CCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEE
Q 043706 134 SATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVL 210 (586)
Q Consensus 134 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L 210 (586)
++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+.. +++|++|
T Consensus 74 ~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L 153 (635)
T 4g8a_A 74 SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 153 (635)
T ss_dssp TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEE
T ss_pred CCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCee
Confidence 9999999999999999888889999999999999999999877788999999999999999999776654 5889999
Q ss_pred ecccCCCCCc-CCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCC----CcEEEccCCCCcccCCCCCcCccccccccc
Q 043706 211 DLSSNLFNGS-LPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQ----NVTIDLSFNNLTGAIPGALPLVNQRMESFS 284 (586)
Q Consensus 211 ~Ls~N~l~~~-~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~----L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~ 284 (586)
+|++|.+++. +|..+.. ++|++|+|++|++++..+..+.. +.+ +..++++.|.++...|............+.
T Consensus 154 ~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~ 232 (635)
T 4g8a_A 154 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV-LHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR 232 (635)
T ss_dssp ECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH-HHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEE
T ss_pred ccccCccccCCCchhhccchhhhhhcccCccccccccccccc-hhhhhhhhhhhhcccCcccccCcccccchhhhhhhhh
Confidence 9999999864 5777776 89999999999999877776654 443 457999999999887776654443333333
Q ss_pred C
Q 043706 285 G 285 (586)
Q Consensus 285 ~ 285 (586)
+
T Consensus 233 ~ 233 (635)
T 4g8a_A 233 N 233 (635)
T ss_dssp S
T ss_pred c
Confidence 3
No 80
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.79 E-value=9.7e-20 Score=196.08 Aligned_cols=173 Identities=21% Similarity=0.197 Sum_probs=149.5
Q ss_pred ccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCC
Q 043706 107 DLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSL 186 (586)
Q Consensus 107 ~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 186 (586)
....+++|+.|+|++|.|++..|..|..+++|++|+|++|.+++.+| +..+++|++|+|++|.|++.. ..++|
T Consensus 29 l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L 101 (487)
T 3oja_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSI 101 (487)
T ss_dssp TSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTC
T ss_pred hcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCc
Confidence 33445589999999999999889999999999999999999998766 999999999999999998543 23899
Q ss_pred cEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCC
Q 043706 187 TVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNL 265 (586)
Q Consensus 187 ~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l 265 (586)
+.|+|++|.|++..+..+++|+.|+|++|.+++..|..++. ++|++|+|++|.+++.+|..+...+++|+.|+|++|.|
T Consensus 102 ~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 102 ETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp CEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred CEEECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 99999999999988888999999999999999998888877 89999999999999988888875599999999999999
Q ss_pred cccCCCCCcCcccccccccCCc
Q 043706 266 TGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 266 ~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
++..+.. ....+..+.+.+|.
T Consensus 182 ~~~~~~~-~l~~L~~L~Ls~N~ 202 (487)
T 3oja_A 182 YDVKGQV-VFAKLKTLDLSSNK 202 (487)
T ss_dssp CEEECCC-CCTTCCEEECCSSC
T ss_pred ccccccc-cCCCCCEEECCCCC
Confidence 9874433 35556666666654
No 81
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=2.4e-20 Score=210.13 Aligned_cols=225 Identities=18% Similarity=0.179 Sum_probs=105.2
Q ss_pred chhHHHHHHHHHhcccCCcccCCCCCCCCCCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCC
Q 043706 34 NTDGVLLLSFKYSILSDPLSVLQNWNYDDATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQH 113 (586)
Q Consensus 34 ~~~~~~Ll~~k~~l~~~~~~~l~~W~~~~~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~ 113 (586)
..+..+|+++..++.......-..|.......+.|.++.+.. ++++.|+|.+|.+... +..+.....
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~------------~~~~~l~L~~n~~~~~-~~~~l~~l~ 197 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST------------PLTPKIELFANGKDEA-NQALLQHKK 197 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC------------CccceEEeeCCCCCcc-hhhHhhcCc
Confidence 466788999988764333333445654444567898888765 4566677766666552 222211111
Q ss_pred C-----CEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcE
Q 043706 114 L-----RHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTV 188 (586)
Q Consensus 114 L-----~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 188 (586)
| ..++++.|.+. ..|..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|+++++|++
T Consensus 198 Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~ 274 (727)
T 4b8c_D 198 LSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRV 274 (727)
T ss_dssp -------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCE
T ss_pred cCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCE
Confidence 1 12222233333 34566667777777777777776 56666667777777777777777 66777777777777
Q ss_pred EecccccCCcCCCCCC---CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCC
Q 043706 189 VSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNN 264 (586)
Q Consensus 189 L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 264 (586)
|+|++|.|+ .+|..+ ++|++|+|++|.|+ .+|..|+. ++|+.|+|++|.|+|.+|..+......+..|+|++|.
T Consensus 275 L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~ 352 (727)
T 4b8c_D 275 LDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNR 352 (727)
T ss_dssp EECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCc
Confidence 777777777 556553 66777777777776 55666665 7777777777777777666665411122346677777
Q ss_pred CcccCCCCCcCc
Q 043706 265 LTGAIPGALPLV 276 (586)
Q Consensus 265 l~g~ip~~~~~~ 276 (586)
++|.+|..+...
T Consensus 353 l~~~~p~~l~~l 364 (727)
T 4b8c_D 353 PEIPLPHERRFI 364 (727)
T ss_dssp CCCCCCCC----
T ss_pred ccCcCcccccee
Confidence 777777665433
No 82
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.79 E-value=1.9e-18 Score=177.66 Aligned_cols=198 Identities=22% Similarity=0.287 Sum_probs=106.0
Q ss_pred CcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCc------
Q 043706 80 TIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELP------ 153 (586)
Q Consensus 80 ~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p------ 153 (586)
.++....+.+++.|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|++|++++|.+++..+
T Consensus 124 ~~~~~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~ 200 (347)
T 4fmz_A 124 DISPLANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTS 200 (347)
T ss_dssp CCGGGTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTT
T ss_pred CchhhccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCc
Confidence 333333455666666666644443332 5555555555555555543322 4455555555555555543222
Q ss_pred --------------cccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCC-CCCCCCCcEEecccCCCC
Q 043706 154 --------------DLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSI-PSGFTSVEVLDLSSNLFN 218 (586)
Q Consensus 154 --------------~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~-p~~l~~L~~L~Ls~N~l~ 218 (586)
..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++.. -..+++|+.|++++|.++
T Consensus 201 L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~ 278 (347)
T 4fmz_A 201 LHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQIS 278 (347)
T ss_dssp CCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred cceeecccCCCCCCchhhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccC
Confidence 004555566666666666654332 556666666666666665421 122456666666666666
Q ss_pred CcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCC
Q 043706 219 GSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGN 286 (586)
Q Consensus 219 ~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n 286 (586)
+. + .+.. ++|+.|++++|.+++..|..+.. +++|+.|+|++|++++.+| ...+..+..+.+.+|
T Consensus 279 ~~-~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 279 DI-S-VLNNLSQLNSLFLNNNQLGNEDMEVIGG-LTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQ 343 (347)
T ss_dssp CC-G-GGGGCTTCSEEECCSSCCCGGGHHHHHT-CTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC
T ss_pred CC-h-hhcCCCCCCEEECcCCcCCCcChhHhhc-cccCCEEEccCCccccccC-hhhhhccceeehhhh
Confidence 53 2 2333 66677777777766555555555 6777777777777766555 222333444444444
No 83
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.78 E-value=4.7e-18 Score=181.36 Aligned_cols=176 Identities=23% Similarity=0.223 Sum_probs=90.7
Q ss_pred eCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCC
Q 043706 73 CTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGEL 152 (586)
Q Consensus 73 C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~ 152 (586)
+.....+.+|....+.+++.|+|++|.+.+. | ++.+++|++|+|++|.|++. | +..+++|++|+|++|++++ +
T Consensus 49 Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l 121 (457)
T 3bz5_A 49 CHNSSITDMTGIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-L 121 (457)
T ss_dssp CCSSCCCCCTTGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-C
T ss_pred ccCCCcccChhhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-e
Confidence 3333334444333445666666666666663 2 66666666666666666653 2 5666666666666666665 3
Q ss_pred ccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-Ccc
Q 043706 153 PDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG-GNL 230 (586)
Q Consensus 153 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L 230 (586)
| ++.+++|++|++++|++++. + ++.+++|+.|++++|...+.++ ..+++|+.|+|++|++++ +| +.. ++|
T Consensus 122 ~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L 193 (457)
T 3bz5_A 122 D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD--VSQNKLL 193 (457)
T ss_dssp C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--CTTCTTC
T ss_pred c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--cccCCCC
Confidence 3 56666666666666666652 2 4555555555555553333332 223455555555555554 22 222 444
Q ss_pred cEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcc
Q 043706 231 RYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTG 267 (586)
Q Consensus 231 ~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g 267 (586)
+.|++++|++++. + +.. +++|+.|++++|++++
T Consensus 194 ~~L~l~~N~l~~~-~--l~~-l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 194 NRLNCDTNNITKL-D--LNQ-NIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CEEECCSSCCSCC-C--CTT-CTTCSEEECCSSCCSC
T ss_pred CEEECcCCcCCee-c--ccc-CCCCCEEECcCCcccc
Confidence 4444444444432 1 222 4444444444444444
No 84
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.78 E-value=2.2e-18 Score=184.63 Aligned_cols=170 Identities=26% Similarity=0.362 Sum_probs=81.9
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNL 167 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 167 (586)
.+++.|++++|.+.+..+ ++.+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++..+ +..+++|+.|++
T Consensus 199 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 272 (466)
T 1o6v_A 199 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEEC
Confidence 344444444444444332 34444444444444444432 234445555555555555544333 445555555555
Q ss_pred cCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCc
Q 043706 168 SVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSIS 245 (586)
Q Consensus 168 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip 245 (586)
++|.+++..+ +..+++|+.|+|++|.+++..+ ..+++|+.|+|++|.+++..| +.. ++|+.|++++|.+++.
T Consensus 273 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-- 346 (466)
T 1o6v_A 273 GANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-- 346 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--
T ss_pred CCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--
Confidence 5555554322 4455555555555555554332 223555555555555554443 222 5555555555555533
Q ss_pred HHHHhcCCCCcEEEccCCCCcccCC
Q 043706 246 PEFAKRIPQNVTIDLSFNNLTGAIP 270 (586)
Q Consensus 246 ~~~~~~l~~L~~L~Ls~N~l~g~ip 270 (586)
..+.. +++|+.|++++|++++.+|
T Consensus 347 ~~l~~-l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 347 SSLAN-LTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp GGGTT-CTTCCEEECCSSCCCBCGG
T ss_pred hhhcc-CCCCCEEeCCCCccCccch
Confidence 23333 5555555555555555554
No 85
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=2.1e-18 Score=165.60 Aligned_cols=154 Identities=21% Similarity=0.207 Sum_probs=121.8
Q ss_pred EEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCC-ccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCC
Q 043706 92 SLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLP-LSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVN 170 (586)
Q Consensus 92 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 170 (586)
.+++++|.+.. +|..+. ..++.|+|++|.|++..| ..|..+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 68899988876 565553 456889999999987755 34778888999999999888777778888888888888888
Q ss_pred CCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHH
Q 043706 171 ALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFA 249 (586)
Q Consensus 171 ~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~ 249 (586)
++++..+..|.++++|++|+|++|.|++..|. .|.. ++|++|+|++|+|++..|..+.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~ 150 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGND---------------------SFIGLSSVRLLSLYDNQITTVAPGAFD 150 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTT---------------------SSTTCTTCSEEECTTSCCCCBCTTTTT
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHh---------------------HcCCCccCCEEECCCCcCCEECHHHhc
Confidence 88887777788888887777777777655444 3433 5788888888888877677777
Q ss_pred hcCCCCcEEEccCCCCcccCC
Q 043706 250 KRIPQNVTIDLSFNNLTGAIP 270 (586)
Q Consensus 250 ~~l~~L~~L~Ls~N~l~g~ip 270 (586)
. +++|+.|+|++|++++..+
T Consensus 151 ~-l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 151 T-LHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp T-CTTCCEEECCSCCEECSGG
T ss_pred C-CCCCCEEEecCcCCcCCCc
Confidence 6 9999999999999987654
No 86
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.78 E-value=1e-18 Score=169.94 Aligned_cols=187 Identities=15% Similarity=0.216 Sum_probs=157.2
Q ss_pred eeeCCCCCCCcCC--CCCCCceEEEEcCCCC-CcccCccccCCCCCCCEEEccC-CCCCCCCCccccCCCCCcEEEeeCC
Q 043706 71 VTCTQIDATTIPG--SPDMFRVISLILPNSQ-LLGSVTKDLGLIQHLRHLDLSN-NFFNGSLPLSIFSATELQVLSLSNN 146 (586)
Q Consensus 71 v~C~~~~~~~ip~--~~~~~~l~~L~L~~n~-l~~~~~~~l~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N 146 (586)
+.......+.+|. ...+.+++.|+|++|. +.+..+..|..+++|++|+|++ |.|++..+..|..+++|++|+|++|
T Consensus 36 L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n 115 (239)
T 2xwt_C 36 LKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT 115 (239)
T ss_dssp EEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEE
T ss_pred EEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCC
Confidence 3344444556654 2357899999999997 8877777999999999999999 9999777788999999999999999
Q ss_pred CCCCCCccccCCCCCCc---EEEccCC-CCCCCCchhcCCCCCCc-EEecccccCCcCCCC-CC--CCCcEEecccCC-C
Q 043706 147 AISGELPDLIGQIPRLQ---LLNLSVN-ALAGKVPRNLTAVKSLT-VVSLRSNYFSGSIPS-GF--TSVEVLDLSSNL-F 217 (586)
Q Consensus 147 ~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~L~~N~l~g~~p~-~l--~~L~~L~Ls~N~-l 217 (586)
.+++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|++++|.++ .+|. .+ ++|+.|+|++|+ +
T Consensus 116 ~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l 192 (239)
T 2xwt_C 116 GLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYL 192 (239)
T ss_dssp CCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTC
T ss_pred CCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCc
Confidence 9996 676 88999998 9999999 99977777899999999 9999999998 4443 33 689999999995 9
Q ss_pred CCcCCcCCCC--CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCC
Q 043706 218 NGSLPLDFGG--GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNN 264 (586)
Q Consensus 218 ~~~~p~~~~~--~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 264 (586)
++..+..|.. ++|+.|++++|+++ .+|.. . +++|+.|+++++.
T Consensus 193 ~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~-~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 193 TVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--G-LEHLKELIARNTW 237 (239)
T ss_dssp CEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--T-CTTCSEEECTTC-
T ss_pred ccCCHHHhhccccCCcEEECCCCccc-cCChh--H-hccCceeeccCcc
Confidence 9776777765 69999999999998 56665 3 8899999998863
No 87
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.78 E-value=9.1e-18 Score=179.15 Aligned_cols=184 Identities=21% Similarity=0.205 Sum_probs=155.3
Q ss_pred eeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCC
Q 043706 72 TCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGE 151 (586)
Q Consensus 72 ~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~ 151 (586)
.......+.+| ...+.+++.|+|++|.+.+. + ++.+++|++|+|++|.+++ +| +..+++|++|+|++|++++.
T Consensus 70 ~Ls~n~l~~~~-~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l 142 (457)
T 3bz5_A 70 ICTSNNITTLD-LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI 142 (457)
T ss_dssp ECCSSCCSCCC-CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC
T ss_pred EccCCcCCeEc-cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee
Confidence 33334455555 44568999999999999985 3 8999999999999999997 44 89999999999999999974
Q ss_pred CccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-Ccc
Q 043706 152 LPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNL 230 (586)
Q Consensus 152 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L 230 (586)
+ ++.+++|++|++++|+..+.+ .+..+++|+.|++++|.+++.....+++|+.|++++|.+++. .+.. ++|
T Consensus 143 -~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~l~~l~~L~~L~l~~N~l~~~---~l~~l~~L 214 (457)
T 3bz5_A 143 -D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELDVSQNKLLNRLNCDTNNITKL---DLNQNIQL 214 (457)
T ss_dssp -C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCCCTTCTTCCEEECCSSCCSCC---CCTTCTTC
T ss_pred -c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccceeccccCCCCCEEECcCCcCCee---ccccCCCC
Confidence 3 889999999999999777776 488999999999999999985545678999999999999976 2555 899
Q ss_pred cEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc
Q 043706 231 RYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP 274 (586)
Q Consensus 231 ~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 274 (586)
++|++++|++++ +| +.. +++|+.|++++|++++..+..+.
T Consensus 215 ~~L~Ls~N~l~~-ip--~~~-l~~L~~L~l~~N~l~~~~~~~l~ 254 (457)
T 3bz5_A 215 TFLDCSSNKLTE-ID--VTP-LTQLTYFDCSVNPLTELDVSTLS 254 (457)
T ss_dssp SEEECCSSCCSC-CC--CTT-CTTCSEEECCSSCCSCCCCTTCT
T ss_pred CEEECcCCcccc-cC--ccc-cCCCCEEEeeCCcCCCcCHHHCC
Confidence 999999999997 67 444 99999999999999997665443
No 88
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=2.6e-19 Score=168.15 Aligned_cols=138 Identities=27% Similarity=0.353 Sum_probs=122.5
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCcc-ccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEE
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTK-DLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVL 141 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 141 (586)
.+.|.|..+.|...+++.+|.... .+++.|+|++|.+.+..+. .|+.+++|++|+|++|.|++..|..|..+++|++|
T Consensus 5 ~C~C~~~~l~~s~~~l~~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 83 (192)
T 1w8a_A 5 MCHCEGTTVDCTGRGLKEIPRDIP-LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQEL 83 (192)
T ss_dssp TSEEETTEEECTTSCCSSCCSCCC-TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred CCEECCCEEEcCCCCcCcCccCCC-CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEE
Confidence 456899999999988999998665 4899999999999887765 48899999999999999998889999999999999
Q ss_pred EeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC
Q 043706 142 SLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP 201 (586)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p 201 (586)
+|++|+|++..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|.+++..+
T Consensus 84 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp ECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 999999998888889999999999999999999889999999999999999999887654
No 89
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.77 E-value=1e-18 Score=192.40 Aligned_cols=198 Identities=27% Similarity=0.374 Sum_probs=104.1
Q ss_pred eeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCC
Q 043706 71 VTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISG 150 (586)
Q Consensus 71 v~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~ 150 (586)
+.|...+++.+|.... .+++.|+|++|.+.. +|. .+++|++|+|++|.|+ .+|. .+++|++|+|++|.+++
T Consensus 45 L~ls~n~L~~lp~~l~-~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~ 115 (622)
T 3g06_A 45 LNVGESGLTTLPDCLP-AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH 115 (622)
T ss_dssp EECCSSCCSCCCSCCC-TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC
T ss_pred EEecCCCcCccChhhC-CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC
Confidence 3455555667776554 567777777777664 333 4566666666666665 2333 33444444444444442
Q ss_pred CCccccC-----------------CCCCCcEEEccCCCCCCC--CchhcCCC--------------CCCcEEecccccCC
Q 043706 151 ELPDLIG-----------------QIPRLQLLNLSVNALAGK--VPRNLTAV--------------KSLTVVSLRSNYFS 197 (586)
Q Consensus 151 ~~p~~~~-----------------~l~~L~~L~L~~N~l~~~--~p~~l~~l--------------~~L~~L~L~~N~l~ 197 (586)
. |..+. .+++|++|+|++|++++. .+..+..+ ++|+.|+|++|.|+
T Consensus 116 l-~~~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 116 L-PALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLA 194 (622)
T ss_dssp C-CCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCS
T ss_pred C-CCCCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCC
Confidence 1 11110 124555566666655531 11122212 55666666666665
Q ss_pred cC-------------------CCCCCCCCcEEecccCCCCCcCCcCCCCCcccEEEcccCcCCCcCcHHHHhcCCCCcEE
Q 043706 198 GS-------------------IPSGFTSVEVLDLSSNLFNGSLPLDFGGGNLRYLNLSYNKISGSISPEFAKRIPQNVTI 258 (586)
Q Consensus 198 g~-------------------~p~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L 258 (586)
+. +|..+++|+.|+|++|.|++ +|..+ ++|+.|+|++|+|+ .+|. .+++|+.|
T Consensus 195 ~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~L~~-lp~~l--~~L~~L~Ls~N~L~-~lp~----~~~~L~~L 266 (622)
T 3g06_A 195 SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLTS-LPVLP--SELKELMVSGNRLT-SLPM----LPSGLLSL 266 (622)
T ss_dssp CCCCCCTTCCEEECCSSCCSSCCCCCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCS-CCCC----CCTTCCEE
T ss_pred CCCCccchhhEEECcCCcccccCCCCCCCCEEEccCCccCc-CCCCC--CcCcEEECCCCCCC-cCCc----ccccCcEE
Confidence 41 22223556666666666664 33111 56777777777776 4555 26677777
Q ss_pred EccCCCCcccCCCCCc-CcccccccccCCc
Q 043706 259 DLSFNNLTGAIPGALP-LVNQRMESFSGNV 287 (586)
Q Consensus 259 ~Ls~N~l~g~ip~~~~-~~~~~~~~~~~n~ 287 (586)
+|++|+|+ .+|..+. ...+..+.+.+|+
T Consensus 267 ~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~ 295 (622)
T 3g06_A 267 SVYRNQLT-RLPESLIHLSSETTVNLEGNP 295 (622)
T ss_dssp ECCSSCCC-SCCGGGGGSCTTCEEECCSCC
T ss_pred eCCCCCCC-cCCHHHhhccccCEEEecCCC
Confidence 77777777 4454332 3334445555554
No 90
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=7.3e-19 Score=181.99 Aligned_cols=177 Identities=25% Similarity=0.221 Sum_probs=130.5
Q ss_pred EEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCcccc-CCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCC
Q 043706 92 SLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIF-SATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVN 170 (586)
Q Consensus 92 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 170 (586)
.++++++++.. +|..+. ..++.|+|++|+|++..+..+. .+++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 57888888876 555443 4588899999988877777776 8888888888888888777778888888888888888
Q ss_pred CCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHH
Q 043706 171 ALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFA 249 (586)
Q Consensus 171 ~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~ 249 (586)
+|++..+..|.++++|+.|+|++|.|++..|.. |.. ++|+.|+|++|+|+ .+|..++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~---------------------~~~l~~L~~L~L~~N~l~-~l~~~~~ 156 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNA---------------------FEDMAQLQKLYLSQNQIS-RFPVELI 156 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTT---------------------TTTCTTCCEEECCSSCCC-SCCGGGT
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHH---------------------hCCcccCCEEECCCCcCC-eeCHHHh
Confidence 888766667777877777777777776544433 333 56777777777776 4565553
Q ss_pred ---hcCCCCcEEEccCCCCcccCCCCCcCcc---cccccccCCccccCCC
Q 043706 250 ---KRIPQNVTIDLSFNNLTGAIPGALPLVN---QRMESFSGNVELCGKP 293 (586)
Q Consensus 250 ---~~l~~L~~L~Ls~N~l~g~ip~~~~~~~---~~~~~~~~n~~lc~~~ 293 (586)
..+++|+.|||++|+|++..+..+.... +..+.+.+|++.|+|.
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 2389999999999999976544332221 2457788999999875
No 91
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.5e-18 Score=165.03 Aligned_cols=128 Identities=20% Similarity=0.203 Sum_probs=96.2
Q ss_pred EEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCC
Q 043706 92 SLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNA 171 (586)
Q Consensus 92 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 171 (586)
.++++++++.. +|..+. ++|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 57888888875 455443 688999999999987777788888899999999999888888888888889999998888
Q ss_pred CCCCCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCC
Q 043706 172 LAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLP 222 (586)
Q Consensus 172 l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p 222 (586)
|+...+..|.++++|+.|+|++|.|++..|..| ++|+.|+|++|.|++..+
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 886655567788888888888887776655543 444555555555444333
No 92
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.77 E-value=4.1e-19 Score=189.38 Aligned_cols=193 Identities=21% Similarity=0.235 Sum_probs=111.9
Q ss_pred CCCcCCCC-CCCceEEEEcCCCCCcccCccccCCCCCC-------------CEEEccCCCCCCCCCccccCCCCCcEEEe
Q 043706 78 ATTIPGSP-DMFRVISLILPNSQLLGSVTKDLGLIQHL-------------RHLDLSNNFFNGSLPLSIFSATELQVLSL 143 (586)
Q Consensus 78 ~~~ip~~~-~~~~l~~L~L~~n~l~~~~~~~l~~l~~L-------------~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 143 (586)
.+.+|... .+.+++.|+|++|.+.|.+|..++.+.+| ++|++++|.+++ +|.. .++|++|+|
T Consensus 23 l~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l 98 (454)
T 1jl5_A 23 LTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVA 98 (454)
T ss_dssp -----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEEC
T ss_pred hhhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEc
Confidence 35566433 46677788888888888888877776643 666666666654 2221 234555555
Q ss_pred eCCCCCCCCccccC----------------CC-CCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCC
Q 043706 144 SNNAISGELPDLIG----------------QI-PRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTS 206 (586)
Q Consensus 144 s~N~l~~~~p~~~~----------------~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~ 206 (586)
++|.+++ +|..+. .+ ++|++|+|++|++++ +| .|+++++|++|++++|.+++ +|..+.+
T Consensus 99 ~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~~~ 174 (454)
T 1jl5_A 99 SCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLPPS 174 (454)
T ss_dssp CSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCCTT
T ss_pred cCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCccc
Confidence 5555554 332211 11 467777777777775 56 47777777777777777775 6666677
Q ss_pred CcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccC
Q 043706 207 VEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSG 285 (586)
Q Consensus 207 L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~ 285 (586)
|++|+|++|.+++ +| .+.. ++|++|++++|++++ +|.. .++|+.|++++|+++ .+|.......+..+.+.+
T Consensus 175 L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~~ 246 (454)
T 1jl5_A 175 LEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL----PLSLESIVAGNNILE-ELPELQNLPFLTTIYADN 246 (454)
T ss_dssp CCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC----CTTCCEEECCSSCCS-SCCCCTTCTTCCEEECCS
T ss_pred ccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC----cCcccEEECcCCcCC-cccccCCCCCCCEEECCC
Confidence 7777777777776 44 3444 667777777777664 3321 345666666666666 455433333444444444
Q ss_pred C
Q 043706 286 N 286 (586)
Q Consensus 286 n 286 (586)
|
T Consensus 247 N 247 (454)
T 1jl5_A 247 N 247 (454)
T ss_dssp S
T ss_pred C
Confidence 4
No 93
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=3.3e-18 Score=171.49 Aligned_cols=167 Identities=22% Similarity=0.306 Sum_probs=143.6
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNL 167 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 167 (586)
.+++.|++++|.+... +.+..+++|+.|+|++|.+++..+ +..+++|++|+|++|.+++ ++ .+..+++|++|+|
T Consensus 46 ~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L 119 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSL 119 (291)
T ss_dssp HTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEEC
T ss_pred CcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEEC
Confidence 5789999999998865 358899999999999999997655 9999999999999999986 33 4999999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEecccccCCcCCC--CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcC
Q 043706 168 SVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP--SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSI 244 (586)
Q Consensus 168 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p--~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~i 244 (586)
++|++++. ..+..+++|+.|++++|.+++. + ..+++|+.|+|++|++++..+ +.. ++|+.|+|++|.+++ +
T Consensus 120 ~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l 193 (291)
T 1h6t_A 120 EHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L 193 (291)
T ss_dssp TTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C
T ss_pred CCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-C
Confidence 99999864 5788999999999999999875 3 235899999999999998766 555 999999999999985 5
Q ss_pred cHHHHhcCCCCcEEEccCCCCccc
Q 043706 245 SPEFAKRIPQNVTIDLSFNNLTGA 268 (586)
Q Consensus 245 p~~~~~~l~~L~~L~Ls~N~l~g~ 268 (586)
+. +.. +++|+.|++++|+++..
T Consensus 194 ~~-l~~-l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 194 RA-LAG-LKNLDVLELFSQECLNK 215 (291)
T ss_dssp GG-GTT-CTTCSEEEEEEEEEECC
T ss_pred hh-hcc-CCCCCEEECcCCcccCC
Confidence 53 555 99999999999998753
No 94
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.76 E-value=2.3e-17 Score=175.85 Aligned_cols=140 Identities=25% Similarity=0.366 Sum_probs=88.7
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEec
Q 043706 112 QHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSL 191 (586)
Q Consensus 112 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 191 (586)
++|++|+|++|.+++ +| ++.++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 466666666666664 55 46666666677776666664 44332 366667777776665 44 4667777777777
Q ss_pred ccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcc
Q 043706 192 RSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTG 267 (586)
Q Consensus 192 ~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g 267 (586)
++|.+++ +|...++|++|++++|.++ .+|. +.. ++|++|++++|++++ +|. .+++|+.|++++|++++
T Consensus 203 ~~N~l~~-l~~~~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~----~~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 203 DNNSLKK-LPDLPLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPD----LPPSLEALNVRDNYLTD 271 (454)
T ss_dssp CSSCCSS-CCCCCTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCS----CCTTCCEEECCSSCCSC
T ss_pred CCCcCCc-CCCCcCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-ccc----cccccCEEECCCCcccc
Confidence 7777764 4555566777777777776 4553 444 667777777777763 443 14566777777777665
No 95
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.75 E-value=2.6e-17 Score=169.04 Aligned_cols=203 Identities=19% Similarity=0.270 Sum_probs=151.6
Q ss_pred eeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCC
Q 043706 71 VTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISG 150 (586)
Q Consensus 71 v~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~ 150 (586)
+.+.+.....++....+.+++.|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+..+++|++|+|++|.+++
T Consensus 49 L~l~~~~i~~~~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~ 124 (347)
T 4fmz_A 49 LVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISD 124 (347)
T ss_dssp EECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCC
T ss_pred EEEeCCccccchhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccC
Confidence 34444445555555556789999999999887544 8899999999999999885 33 68899999999999999986
Q ss_pred CCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-C
Q 043706 151 ELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG-G 228 (586)
Q Consensus 151 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~-~ 228 (586)
..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ ..+++|+.|++++|.+++..+ +.. +
T Consensus 125 ~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~ 199 (347)
T 4fmz_A 125 ISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LASLT 199 (347)
T ss_dssp CGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG--GGGCT
T ss_pred chh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccccc--ccCCC
Confidence 433 8889999999999997665544 48889999999999998886543 346889999999998886544 444 7
Q ss_pred cccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCC
Q 043706 229 NLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGN 286 (586)
Q Consensus 229 ~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n 286 (586)
+|+.|++++|.+++..+ +.. +++|+.|++++|++++..+ ......+..+.+.+|
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~-~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n 253 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VAN-MTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTN 253 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGG-CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred ccceeecccCCCCCCch--hhc-CCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCC
Confidence 88888888888875443 444 8888888888888886654 223344444554444
No 96
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=1.8e-17 Score=160.00 Aligned_cols=153 Identities=17% Similarity=0.144 Sum_probs=118.6
Q ss_pred EEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCC
Q 043706 92 SLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNA 171 (586)
Q Consensus 92 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 171 (586)
.++.+++++.. +|..+. ++|++|+|++|.|++..|..|..+++|++|+|++|+|+...+..|..+++|++|+|++|+
T Consensus 23 ~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 57888887764 454443 788999999999988888888888899999999999886666777888888888888888
Q ss_pred CCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHh
Q 043706 172 LAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAK 250 (586)
Q Consensus 172 l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~ 250 (586)
|++..+..|..+++|+.|+|++|.|+ .+| ..+.. ++|++|+|++|+|++ +|...+.
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp---------------------~~~~~l~~L~~L~L~~N~l~~-~~~~~~~ 156 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELP---------------------RGIERLTHLTHLALDQNQLKS-IPHGAFD 156 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCC---------------------TTGGGCTTCSEEECCSSCCCC-CCTTTTT
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccC---------------------cccccCCCCCEEECCCCcCCc-cCHHHHh
Confidence 88776667778888888877777776 333 33333 678888888888884 4444444
Q ss_pred cCCCCcEEEccCCCCcccCC
Q 043706 251 RIPQNVTIDLSFNNLTGAIP 270 (586)
Q Consensus 251 ~l~~L~~L~Ls~N~l~g~ip 270 (586)
.+++|+.|+|++|++++..+
T Consensus 157 ~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 157 RLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TCTTCCEEECTTSCBCTTBG
T ss_pred CCCCCCEEEeeCCCccCCcc
Confidence 49999999999999997655
No 97
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.75 E-value=1.5e-17 Score=178.24 Aligned_cols=188 Identities=23% Similarity=0.317 Sum_probs=103.0
Q ss_pred eeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCC
Q 043706 71 VTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISG 150 (586)
Q Consensus 71 v~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~ 150 (586)
+.|...+...+|....+.+++.|+|++|.+.+..+ +..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++
T Consensus 51 L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 126 (466)
T 1o6v_A 51 LQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD 126 (466)
T ss_dssp EECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred EecCCCCCccCcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCC
Confidence 33444444455544445667777777777766543 6777777777777777765444 6667777777777777765
Q ss_pred CCccccCCCCCCcEEEccCCCCCCCCc-------------------hhcCCCCCCcEEecccccCCcCCC-CCCCCCcEE
Q 043706 151 ELPDLIGQIPRLQLLNLSVNALAGKVP-------------------RNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVL 210 (586)
Q Consensus 151 ~~p~~~~~l~~L~~L~L~~N~l~~~~p-------------------~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L 210 (586)
..+ +..+++|++|+|++|.+++... ..+.++++|+.|++++|.+++... ..+++|+.|
T Consensus 127 ~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L 204 (466)
T 1o6v_A 127 IDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESL 204 (466)
T ss_dssp CGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEE
T ss_pred ChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCChhhccCCCCCEE
Confidence 432 6666667777666666654210 114445555555555555543211 123555555
Q ss_pred ecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccC
Q 043706 211 DLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAI 269 (586)
Q Consensus 211 ~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~i 269 (586)
++++|.+++..| ++. ++|+.|++++|++++ ++ .+.. +++|+.|++++|++++..
T Consensus 205 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~l~~-l~~L~~L~l~~n~l~~~~ 259 (466)
T 1o6v_A 205 IATNNQISDITP--LGILTNLDELSLNGNQLKD-IG-TLAS-LTNLTDLDLANNQISNLA 259 (466)
T ss_dssp ECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CG-GGGG-CTTCSEEECCSSCCCCCG
T ss_pred EecCCccccccc--ccccCCCCEEECCCCCccc-ch-hhhc-CCCCCEEECCCCccccch
Confidence 555555554433 222 455555555555542 21 2222 555555555555555443
No 98
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.75 E-value=8e-18 Score=155.66 Aligned_cols=138 Identities=22% Similarity=0.251 Sum_probs=112.5
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEE
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLS 142 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 142 (586)
.+.|.|.++.|...+++.+|.... .+++.|+|++|.+.+..+..|+.+++|++|+|++|.|++..+..|..+++|++|+
T Consensus 4 ~C~C~~~~l~~~~~~l~~~p~~~~-~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 4 RCSCSGTEIRCNSKGLTSVPTGIP-SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILY 82 (177)
T ss_dssp TCEEETTEEECCSSCCSSCCTTCC-TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEeCCCEEEecCCCCccCCCCCC-CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEE
Confidence 456899999999888888886554 6888889998888877777788888888999988888876666778888888888
Q ss_pred eeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC
Q 043706 143 LSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP 201 (586)
Q Consensus 143 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p 201 (586)
|++|+|++..+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|.+++..|
T Consensus 83 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88888887777778888888888888888886665567778888888888888776443
No 99
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.74 E-value=6.6e-18 Score=185.71 Aligned_cols=171 Identities=22% Similarity=0.288 Sum_probs=145.8
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|+|++|.+... + .+..+++|+.|+|++|.|++..| +..+++|+.|+|++|.|++ +| .+..+++|+.|+
T Consensus 42 L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 36788899999998764 3 58999999999999999997655 8999999999999999986 33 789999999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcC
Q 043706 167 LSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSI 244 (586)
Q Consensus 167 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~i 244 (586)
|++|.+++. ..+..+++|+.|+|++|.|++... ..+++|+.|+|++|.|++..| +.. ++|+.|+|++|+|++ +
T Consensus 116 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l 190 (605)
T 1m9s_A 116 LEHNGISDI--NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L 190 (605)
T ss_dssp CTTSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C
T ss_pred ecCCCCCCC--ccccCCCccCEEECCCCccCCchhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-C
Confidence 999999863 568899999999999999997521 236899999999999998777 555 999999999999986 4
Q ss_pred cHHHHhcCCCCcEEEccCCCCcccCC
Q 043706 245 SPEFAKRIPQNVTIDLSFNNLTGAIP 270 (586)
Q Consensus 245 p~~~~~~l~~L~~L~Ls~N~l~g~ip 270 (586)
| .+.. +++|+.|+|++|++++...
T Consensus 191 ~-~l~~-l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 191 R-ALAG-LKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp G-GGTT-CTTCSEEECCSEEEECCCC
T ss_pred h-HHcc-CCCCCEEEccCCcCcCCcc
Confidence 4 4555 9999999999999987643
No 100
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.72 E-value=2.8e-19 Score=182.88 Aligned_cols=175 Identities=22% Similarity=0.199 Sum_probs=103.3
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCC-CCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGS-LPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
.+++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..+..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4556666666666655444 44566666666666666544 555666666666666666666666666666666666666
Q ss_pred ccCC-CCCCC-CchhcCCCCCCcEEecccc-cCCcC-CCC---CCC-CCcEEecccC--CCC-CcCCcCCCC-CcccEEE
Q 043706 167 LSVN-ALAGK-VPRNLTAVKSLTVVSLRSN-YFSGS-IPS---GFT-SVEVLDLSSN--LFN-GSLPLDFGG-GNLRYLN 234 (586)
Q Consensus 167 L~~N-~l~~~-~p~~l~~l~~L~~L~L~~N-~l~g~-~p~---~l~-~L~~L~Ls~N--~l~-~~~p~~~~~-~~L~~L~ 234 (586)
|++| .+++. ++..+.++++|+.|++++| .+++. ++. .++ +|++|+|++| .++ +.++..+.. ++|++|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 6666 45542 4555566666666666666 66542 222 235 6666666666 344 233333333 5666666
Q ss_pred cccCc-CCCcCcHHHHhcCCCCcEEEccCCC
Q 043706 235 LSYNK-ISGSISPEFAKRIPQNVTIDLSFNN 264 (586)
Q Consensus 235 ls~N~-l~g~ip~~~~~~l~~L~~L~Ls~N~ 264 (586)
+++|. +++..+..+.. +++|+.|+|++|.
T Consensus 229 l~~~~~l~~~~~~~l~~-l~~L~~L~l~~~~ 258 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQ-LNYLQHLSLSRCY 258 (336)
T ss_dssp CTTCTTCCGGGGGGGGG-CTTCCEEECTTCT
T ss_pred CCCCCcCCHHHHHHHhC-CCCCCEeeCCCCC
Confidence 66666 55555555554 6666666666664
No 101
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=2.8e-17 Score=154.21 Aligned_cols=131 Identities=21% Similarity=0.254 Sum_probs=88.0
Q ss_pred EEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCc-cccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccC
Q 043706 91 ISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPL-SIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSV 169 (586)
Q Consensus 91 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 169 (586)
+.|++++|++. .+|..+.. +|+.|+|++|.|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 46777877774 45554433 777777777777765554 367777777777777777777777777777777777777
Q ss_pred CCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCc
Q 043706 170 NALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSIS 245 (586)
Q Consensus 170 N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip 245 (586)
|+|++..+..|.++++|++|+|++|+|++..|.. +.. ++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGS---------------------FEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTS---------------------STTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHH---------------------hhcCCCCCEEEeCCCCccCcCc
Confidence 7777766666777777666666666666554443 333 456666666666665554
No 102
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.72 E-value=2.3e-19 Score=187.53 Aligned_cols=201 Identities=21% Similarity=0.262 Sum_probs=148.0
Q ss_pred CCceEEEEcCCC---CCcccCcccc-------CCCCCCCEEEccCCCCCC----CCCccccCCCCCcEEEeeCCCCCCCC
Q 043706 87 MFRVISLILPNS---QLLGSVTKDL-------GLIQHLRHLDLSNNFFNG----SLPLSIFSATELQVLSLSNNAISGEL 152 (586)
Q Consensus 87 ~~~l~~L~L~~n---~l~~~~~~~l-------~~l~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~ 152 (586)
+.+++.|+|++| .+.+.+|..+ ..+++|++|+|++|.|++ .+|..+..+++|++|+|++|.+++..
T Consensus 59 ~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~ 138 (386)
T 2ca6_A 59 KKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQA 138 (386)
T ss_dssp CTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHH
T ss_pred CCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHH
Confidence 467888999885 4556666554 788999999999999987 47778888899999999999887544
Q ss_pred ccccC----CC---------CCCcEEEccCCCCC-CCCc---hhcCCCCCCcEEecccccCC--c---CCC---CCCCCC
Q 043706 153 PDLIG----QI---------PRLQLLNLSVNALA-GKVP---RNLTAVKSLTVVSLRSNYFS--G---SIP---SGFTSV 207 (586)
Q Consensus 153 p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~l~~l~~L~~L~L~~N~l~--g---~~p---~~l~~L 207 (586)
+..+. .+ ++|++|+|++|+++ +.++ ..+..+++|+.|+|++|.++ | ..| ..+++|
T Consensus 139 ~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L 218 (386)
T 2ca6_A 139 GAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQEL 218 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTC
T ss_pred HHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCc
Confidence 44333 33 88999999999987 4455 46677889999999999887 2 233 235788
Q ss_pred cEEecccCCCC----CcCCcCCCC-CcccEEEcccCcCCCc----CcHHHH-hcCCCCcEEEccCCCCcc----cCCCCC
Q 043706 208 EVLDLSSNLFN----GSLPLDFGG-GNLRYLNLSYNKISGS----ISPEFA-KRIPQNVTIDLSFNNLTG----AIPGAL 273 (586)
Q Consensus 208 ~~L~Ls~N~l~----~~~p~~~~~-~~L~~L~ls~N~l~g~----ip~~~~-~~l~~L~~L~Ls~N~l~g----~ip~~~ 273 (586)
+.|+|++|.++ +.+|..+.. ++|++|+|++|.+++. ++..+. ..+++|+.|+|++|++++ .+|..+
T Consensus 219 ~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l 298 (386)
T 2ca6_A 219 KVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVI 298 (386)
T ss_dssp CEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHH
T ss_pred cEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHH
Confidence 99999999986 556666665 7899999999998865 344442 127889999999999987 466554
Q ss_pred -c-CcccccccccCCc
Q 043706 274 -P-LVNQRMESFSGNV 287 (586)
Q Consensus 274 -~-~~~~~~~~~~~n~ 287 (586)
. +..+..+.+.+|.
T Consensus 299 ~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 299 DEKMPDLLFLELNGNR 314 (386)
T ss_dssp HHHCTTCCEEECTTSB
T ss_pred HhcCCCceEEEccCCc
Confidence 2 3455666666665
No 103
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.72 E-value=3.5e-17 Score=153.65 Aligned_cols=133 Identities=26% Similarity=0.287 Sum_probs=102.5
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEE
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLS 142 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 142 (586)
.+.|.|..+.|.+.+++.+|.... .+++.|+|++|.+. .+|..|..+++|+.|+|++|.|++..+..|.++++|++|+
T Consensus 7 ~C~C~~~~l~~~~~~l~~ip~~~~-~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ 84 (193)
T 2wfh_A 7 ECTCLDTVVRCSNKGLKVLPKGIP-RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLI 84 (193)
T ss_dssp TCEEETTEEECTTSCCSSCCSCCC-TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEeCCCEEEcCCCCCCcCCCCCC-CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEE
Confidence 356788899998888888886554 57788888888876 4667778888888888888888877777788888888888
Q ss_pred eeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCC
Q 043706 143 LSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFS 197 (586)
Q Consensus 143 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 197 (586)
|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 85 Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 8888888777777888888888888888887655556777777777777777665
No 104
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.4e-17 Score=156.90 Aligned_cols=149 Identities=13% Similarity=0.215 Sum_probs=88.8
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNL 167 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 167 (586)
.+++.|++++|.+. .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|.+++..+..++.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 45666666666666 233 4666666666666666543 2235666666666666666666656666666666666666
Q ss_pred cCCCCCCCCchhcCCCCCCcEEeccccc-CCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCc
Q 043706 168 SVNALAGKVPRNLTAVKSLTVVSLRSNY-FSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSIS 245 (586)
Q Consensus 168 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip 245 (586)
++|++++..|..+..+++|+.|+|++|. ++ .+| .+.. ++|+.|++++|++++ ++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~----------------------~l~~l~~L~~L~l~~n~i~~-~~ 175 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM----------------------PLKTLPELKSLNIQFDGVHD-YR 175 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG----------------------GGGGCSSCCEEECTTBCCCC-CT
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH----------------------hhcCCCCCCEEECCCCCCcC-hH
Confidence 6666666566666666666666666665 33 222 1222 556666666666653 33
Q ss_pred HHHHhcCCCCcEEEccCCCCc
Q 043706 246 PEFAKRIPQNVTIDLSFNNLT 266 (586)
Q Consensus 246 ~~~~~~l~~L~~L~Ls~N~l~ 266 (586)
.+.. +++|+.|++++|++.
T Consensus 176 -~l~~-l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 176 -GIED-FPKLNQLYAFSQTIG 194 (197)
T ss_dssp -TGGG-CSSCCEEEECBC---
T ss_pred -Hhcc-CCCCCEEEeeCcccC
Confidence 3343 777777777777765
No 105
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.71 E-value=1.3e-17 Score=169.44 Aligned_cols=102 Identities=20% Similarity=0.295 Sum_probs=88.9
Q ss_pred cceeecCCceEEEEEEeC------CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLA------DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||+||+|++. +|+.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+||||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 457999999999999863 47899999998777777788999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccC------------CCCCccHHhhccccc
Q 043706 558 SNGCLASFSFTHA------------SKFHLFFAIIHPFGT 585 (586)
Q Consensus 558 ~~GsL~~~L~~~~------------~~~~l~w~~r~~~~~ 585 (586)
++|+|.++|+... ...+++|..+++|+.
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~ 165 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHH
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHH
Confidence 9999999998642 124699999888753
No 106
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.71 E-value=1.3e-17 Score=167.09 Aligned_cols=101 Identities=20% Similarity=0.291 Sum_probs=86.4
Q ss_pred cceeecCCceEEEEEEeC------CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLA------DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~------~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||+||+|++. +|..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+||||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 457999999999999863 47899999998777666788999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcc----------CCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTH----------ASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~----------~~~~~l~w~~r~~~~ 584 (586)
++|+|.++|+.. .....|+|..+.+|+
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 134 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA 134 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHH
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHH
Confidence 999999999863 123579999988775
No 107
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=3.9e-17 Score=153.81 Aligned_cols=147 Identities=16% Similarity=0.217 Sum_probs=118.2
Q ss_pred ceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCC
Q 043706 70 GVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAIS 149 (586)
Q Consensus 70 gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 149 (586)
.+.+.....+.+|....+.+++.|++++|.+.. ++.+..+++|++|+|++|.+++..|..+..+++|++|+|++|+++
T Consensus 48 ~L~l~~n~i~~l~~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~ 125 (197)
T 4ezg_A 48 YITLANINVTDLTGIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHD 125 (197)
T ss_dssp EEEEESSCCSCCTTGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCB
T ss_pred EEeccCCCccChHHHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccC
Confidence 344444455666655567899999999996653 458999999999999999999888999999999999999999999
Q ss_pred CCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCC
Q 043706 150 GELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNG 219 (586)
Q Consensus 150 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~ 219 (586)
+..|..++.+++|++|+|++|.+.+.+| .+..+++|+.|++++|.+++..+ ..+++|+.|++++|++.+
T Consensus 126 ~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 126 DSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp GGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC----
T ss_pred cHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccCC
Confidence 8889999999999999999998444566 78999999999999999986421 235677777777776653
No 108
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.71 E-value=7.3e-19 Score=183.66 Aligned_cols=200 Identities=16% Similarity=0.216 Sum_probs=157.6
Q ss_pred CCceEEEEcCCCCCcccC----ccccCCCCCCCEEEccCC---CCCCCCCccc-------cCCCCCcEEEeeCCCCCC--
Q 043706 87 MFRVISLILPNSQLLGSV----TKDLGLIQHLRHLDLSNN---FFNGSLPLSI-------FSATELQVLSLSNNAISG-- 150 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~----~~~l~~l~~L~~L~Ls~N---~l~g~~p~~~-------~~l~~L~~L~Ls~N~l~~-- 150 (586)
+.+++.|+|++|.+.+.. +..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.+++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 367999999999998864 445889999999999996 4556677665 789999999999999997
Q ss_pred --CCccccCCCCCCcEEEccCCCCCCCCchhcC----CC---------CCCcEEecccccCC-cCCCC------CCCCCc
Q 043706 151 --ELPDLIGQIPRLQLLNLSVNALAGKVPRNLT----AV---------KSLTVVSLRSNYFS-GSIPS------GFTSVE 208 (586)
Q Consensus 151 --~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~L~~N~l~-g~~p~------~l~~L~ 208 (586)
.+|..+..+++|++|+|++|.+++..+..+. .+ ++|+.|+|++|.++ +.++. .+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 4788899999999999999999755444444 33 89999999999998 44442 357999
Q ss_pred EEecccCCCCC-----cCCcCCCC-CcccEEEcccCcCC----CcCcHHHHhcCCCCcEEEccCCCCccc----CCCCCc
Q 043706 209 VLDLSSNLFNG-----SLPLDFGG-GNLRYLNLSYNKIS----GSISPEFAKRIPQNVTIDLSFNNLTGA----IPGALP 274 (586)
Q Consensus 209 ~L~Ls~N~l~~-----~~p~~~~~-~~L~~L~ls~N~l~----g~ip~~~~~~l~~L~~L~Ls~N~l~g~----ip~~~~ 274 (586)
.|+|++|.++. ..+..+.. ++|++|+|++|.++ +.+|..+.. +++|+.|+|++|++++. +|..+.
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~-~~~L~~L~L~~n~i~~~~~~~l~~~l~ 269 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS-WPNLRELGLNDCLLSARGAAAVVDAFS 269 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG-CTTCCEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc-CCCcCEEECCCCCCchhhHHHHHHHHh
Confidence 99999999983 34435555 89999999999996 677777776 99999999999999876 343321
Q ss_pred ---CcccccccccCCc
Q 043706 275 ---LVNQRMESFSGNV 287 (586)
Q Consensus 275 ---~~~~~~~~~~~n~ 287 (586)
...+..+.+.+|.
T Consensus 270 ~~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 270 KLENIGLQTLRLQYNE 285 (386)
T ss_dssp TCSSCCCCEEECCSSC
T ss_pred hccCCCeEEEECcCCc
Confidence 3344455555543
No 109
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=1.2e-17 Score=164.87 Aligned_cols=167 Identities=20% Similarity=0.250 Sum_probs=131.0
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNL 167 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 167 (586)
.+++.++++++.+.+.. .+..+++|+.|+|++|.|+ .+| .+..+++|++|+|++|++++..+ +..+++|++|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 45666778888887644 5778889999999999887 455 68888999999999999986555 889999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCc
Q 043706 168 SVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSIS 245 (586)
Q Consensus 168 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip 245 (586)
++|++++ +|. +.. ++|+.|+|++|.+++... ..+++|+.|+|++|++++. + .+.. ++|+.|+|++|++++.
T Consensus 93 ~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 93 NRNRLKN-LNG-IPS-ACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp CSSCCSC-CTT-CCC-SSCCEEECCSSCCSBSGGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CCCccCC-cCc-ccc-CcccEEEccCCccCCChhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 9999986 343 333 889999999999886421 2358899999999999865 3 3544 8899999999999865
Q ss_pred HHHHhcCCCCcEEEccCCCCccc
Q 043706 246 PEFAKRIPQNVTIDLSFNNLTGA 268 (586)
Q Consensus 246 ~~~~~~l~~L~~L~Ls~N~l~g~ 268 (586)
..+.. +++|+.|++++|++++.
T Consensus 166 ~~l~~-l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTR-LKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTT-CCCCCEEEEEEEEEECC
T ss_pred HHhcc-CCCCCEEeCCCCcccCC
Confidence 44554 89999999999998865
No 110
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.70 E-value=1.3e-18 Score=180.28 Aligned_cols=183 Identities=22% Similarity=0.234 Sum_probs=137.9
Q ss_pred CceEEEEcCCCCCcccCc----cccCCCC-CCCEEEccCCCCCCCCCccccCC-----CCCcEEEeeCCCCCCCCccccC
Q 043706 88 FRVISLILPNSQLLGSVT----KDLGLIQ-HLRHLDLSNNFFNGSLPLSIFSA-----TELQVLSLSNNAISGELPDLIG 157 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~----~~l~~l~-~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~ 157 (586)
.+++.|+|++|.+.+..+ ..+..++ +|++|+|++|.|++..+..+..+ ++|++|+|++|.+++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 458889999998888776 6777888 89999999998887777777664 8899999999998877766443
Q ss_pred ----CC-CCCcEEEccCCCCCCCCchhc----CC-CCCCcEEecccccCCcCCCCC-------C-CCCcEEecccCCCCC
Q 043706 158 ----QI-PRLQLLNLSVNALAGKVPRNL----TA-VKSLTVVSLRSNYFSGSIPSG-------F-TSVEVLDLSSNLFNG 219 (586)
Q Consensus 158 ----~l-~~L~~L~L~~N~l~~~~p~~l----~~-l~~L~~L~L~~N~l~g~~p~~-------l-~~L~~L~Ls~N~l~~ 219 (586)
.+ ++|++|+|++|++++..+..+ .. .++|++|+|++|.+++..+.. + ++|++|+|++|.+++
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 34 789999999999887666554 33 368999999999888544332 2 488999999998887
Q ss_pred cCCcCCCC------CcccEEEcccCcCCCc----CcHHHHhcCCCCcEEEccCCCCcccCC
Q 043706 220 SLPLDFGG------GNLRYLNLSYNKISGS----ISPEFAKRIPQNVTIDLSFNNLTGAIP 270 (586)
Q Consensus 220 ~~p~~~~~------~~L~~L~ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~ip 270 (586)
..+..+.. ++|+.|+|++|.+++. ++..+....++|+.|||++|++++..+
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 242 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSL 242 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCH
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHH
Confidence 76654432 4888999999988753 455555534588999999998876544
No 111
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.70 E-value=1.6e-17 Score=167.18 Aligned_cols=101 Identities=23% Similarity=0.243 Sum_probs=84.2
Q ss_pred cceeecCCceEEEEEEe------CCCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL------ADGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||+||+|++ .+++.||||+++... ....++|.+|+.++++++|||||+++|+|...+..+|||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 45799999999999987 246899999997543 33457899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhccC-------------CCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHA-------------SKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~-------------~~~~l~w~~r~~~~ 584 (586)
|++|+|.++|+.+. ....|+|..+++|+
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 151 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHH
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHH
Confidence 99999999998641 12468999888765
No 112
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=3.6e-18 Score=192.33 Aligned_cols=150 Identities=23% Similarity=0.246 Sum_probs=104.6
Q ss_pred cCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCC
Q 043706 103 SVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTA 182 (586)
Q Consensus 103 ~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 182 (586)
..+..+..++.|+.|+|++|.|. .+|..++.+++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|++
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 34667788888888888888887 67777778888888888888888 77888888888888888888888 67888888
Q ss_pred CCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCCcCCCC--CcccEEEcccCcCCCcCcHHHHhcCCCCcE
Q 043706 183 VKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPLDFGG--GNLRYLNLSYNKISGSISPEFAKRIPQNVT 257 (586)
Q Consensus 183 l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~ 257 (586)
+++|++|+|++|.|+ .+|..| ++|+.|+|++|.|++.+|..+.. ..+..|+|++|.++|.+|.. |..
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~-------l~~ 363 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE-------RRF 363 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-------cce
Confidence 888888888888886 566544 67888888888888877776655 23335678888888777653 344
Q ss_pred EEccCC
Q 043706 258 IDLSFN 263 (586)
Q Consensus 258 L~Ls~N 263 (586)
|+++.|
T Consensus 364 l~l~~n 369 (727)
T 4b8c_D 364 IEINTD 369 (727)
T ss_dssp ------
T ss_pred eEeecc
Confidence 566655
No 113
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.70 E-value=8e-17 Score=161.40 Aligned_cols=183 Identities=20% Similarity=0.201 Sum_probs=146.2
Q ss_pred eEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccC
Q 043706 90 VISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSV 169 (586)
Q Consensus 90 l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 169 (586)
+..+.+..+.+.+.. .+..+++|+.|++++|.+... + .+..+++|++|+|++|++++..+ +..+++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 334456666665543 245789999999999999854 4 48889999999999999997655 99999999999999
Q ss_pred CCCCCCCchhcCCCCCCcEEecccccCCcCCC--CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcH
Q 043706 170 NALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP--SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISP 246 (586)
Q Consensus 170 N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p--~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~ 246 (586)
|.+++ + ..+..+++|+.|+|++|.+++. + ..+++|+.|+|++|.+++. ..+.. ++|+.|+|++|++++..|
T Consensus 100 n~l~~-~-~~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 100 NKVKD-L-SSLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp SCCCC-G-GGGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CcCCC-C-hhhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 99986 3 4599999999999999999864 3 2358999999999999976 44555 899999999999996544
Q ss_pred HHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCc
Q 043706 247 EFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 247 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
+.. +++|+.|+|++|++++. |.......+..+.+.+|.
T Consensus 174 -l~~-l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 174 -LAG-LTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQE 211 (291)
T ss_dssp -GTT-CTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEE
T ss_pred -hcC-CCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCc
Confidence 555 99999999999999874 443344555666666665
No 114
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.69 E-value=3.1e-18 Score=175.10 Aligned_cols=179 Identities=24% Similarity=0.230 Sum_probs=152.1
Q ss_pred CCCCCceEEEEcCCCCCccc-CccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCC-CCCCC-CccccCCCC
Q 043706 84 SPDMFRVISLILPNSQLLGS-VTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNN-AISGE-LPDLIGQIP 160 (586)
Q Consensus 84 ~~~~~~l~~L~L~~n~l~~~-~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~ 160 (586)
...+.+++.|+|++|.+.+. ++..+..+++|++|+|++|.+++..|..+..+++|++|+|++| .+++. ++..+..++
T Consensus 89 ~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~ 168 (336)
T 2ast_B 89 HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCS 168 (336)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCT
T ss_pred hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCC
Confidence 34568899999999999876 8888999999999999999999999999999999999999999 78763 777789999
Q ss_pred CCcEEEccCC-CCCCC-CchhcCCCC-CCcEEecccc--cCC-cCCCC---CCCCCcEEecccCC-CCCcCCcCCCC-Cc
Q 043706 161 RLQLLNLSVN-ALAGK-VPRNLTAVK-SLTVVSLRSN--YFS-GSIPS---GFTSVEVLDLSSNL-FNGSLPLDFGG-GN 229 (586)
Q Consensus 161 ~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~L~~N--~l~-g~~p~---~l~~L~~L~Ls~N~-l~~~~p~~~~~-~~ 229 (586)
+|++|+|++| .+++. ++..+..++ +|+.|+|++| .++ +.+|. .+++|+.|+|++|. +++..+..+.. ++
T Consensus 169 ~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~ 248 (336)
T 2ast_B 169 RLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNY 248 (336)
T ss_dssp TCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTT
T ss_pred CCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCC
Confidence 9999999999 99865 677888999 9999999999 565 33443 36899999999999 88777777776 99
Q ss_pred ccEEEcccCc-CCCcCcHHHHhcCCCCcEEEccCC
Q 043706 230 LRYLNLSYNK-ISGSISPEFAKRIPQNVTIDLSFN 263 (586)
Q Consensus 230 L~~L~ls~N~-l~g~ip~~~~~~l~~L~~L~Ls~N 263 (586)
|++|++++|. +.......+.. +++|+.|+|++|
T Consensus 249 L~~L~l~~~~~~~~~~~~~l~~-~~~L~~L~l~~~ 282 (336)
T 2ast_B 249 LQHLSLSRCYDIIPETLLELGE-IPTLKTLQVFGI 282 (336)
T ss_dssp CCEEECTTCTTCCGGGGGGGGG-CTTCCEEECTTS
T ss_pred CCEeeCCCCCCCCHHHHHHHhc-CCCCCEEeccCc
Confidence 9999999995 33222224555 999999999998
No 115
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.68 E-value=3.5e-18 Score=176.94 Aligned_cols=176 Identities=28% Similarity=0.259 Sum_probs=148.8
Q ss_pred EEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCC----ccccCCC-CCcEEEeeCCCCCCCCccccCCC-----CC
Q 043706 92 SLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLP----LSIFSAT-ELQVLSLSNNAISGELPDLIGQI-----PR 161 (586)
Q Consensus 92 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 161 (586)
.+.|+.|+++|.+|..+...++|++|+|++|.|++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46789999999999988888899999999999997776 7788888 99999999999998888877765 99
Q ss_pred CcEEEccCCCCCCCCchhcC----CC-CCCcEEecccccCCcCCCCCC--------CCCcEEecccCCCCCcCCcCC---
Q 043706 162 LQLLNLSVNALAGKVPRNLT----AV-KSLTVVSLRSNYFSGSIPSGF--------TSVEVLDLSSNLFNGSLPLDF--- 225 (586)
Q Consensus 162 L~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~L~~N~l~g~~p~~l--------~~L~~L~Ls~N~l~~~~p~~~--- 225 (586)
|++|+|++|.+++..+..++ .+ ++|+.|+|++|.+++..+..+ ++|++|+|++|.+++.....+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999988777554 44 899999999999987665432 589999999999997554443
Q ss_pred -CC--CcccEEEcccCcCCCcCcHHHHh---cC-CCCcEEEccCCCCcc
Q 043706 226 -GG--GNLRYLNLSYNKISGSISPEFAK---RI-PQNVTIDLSFNNLTG 267 (586)
Q Consensus 226 -~~--~~L~~L~ls~N~l~g~ip~~~~~---~l-~~L~~L~Ls~N~l~g 267 (586)
.. ++|++|+|++|++++..+..+.. .+ ++|+.|||++|.+++
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 22 48999999999999877765554 14 599999999999986
No 116
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.68 E-value=6.2e-17 Score=177.98 Aligned_cols=185 Identities=20% Similarity=0.202 Sum_probs=150.8
Q ss_pred ceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEcc
Q 043706 89 RVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLS 168 (586)
Q Consensus 89 ~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 168 (586)
.+..+.|..+.+.+.++ +..|++|+.|+|++|.|.. +| .+..+++|+.|+|++|+|++..| +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 44556677777766544 5678999999999999984 44 58999999999999999997665 8999999999999
Q ss_pred CCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcH
Q 043706 169 VNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISP 246 (586)
Q Consensus 169 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~ 246 (586)
+|.|++ + ..+..+++|+.|+|++|.|++..+ ..+++|+.|+|++|.|++. ..+.. ++|+.|+|++|.|++..|
T Consensus 96 ~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 96 ENKIKD-L-SSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp SSCCCC-C-TTSTTCTTCCEEECTTSCCCCCGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCCC-C-hhhccCCCCCEEEecCCCCCCCccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 999986 3 379999999999999999996421 2368999999999999976 44555 899999999999997666
Q ss_pred HHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCc
Q 043706 247 EFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 247 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
+.. +++|+.|+|++|+|++. |....+..+..+.+.+|.
T Consensus 171 -l~~-l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 171 -LAG-LTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp -GTT-CTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEE
T ss_pred -hcc-CCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCc
Confidence 555 99999999999999975 544445566666666665
No 117
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=4.2e-16 Score=142.66 Aligned_cols=129 Identities=24% Similarity=0.182 Sum_probs=101.0
Q ss_pred CceEEEEcCCCCCc-ccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 88 FRVISLILPNSQLL-GSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 88 ~~l~~L~L~~n~l~-~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
.+++.|+|++|.+. +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 57888888888887 67788788888888888888888865 6788888888888888888877788777888888888
Q ss_pred ccCCCCCCCC-chhcCCCCCCcEEecccccCCcCCC------CCCCCCcEEecccCCCC
Q 043706 167 LSVNALAGKV-PRNLTAVKSLTVVSLRSNYFSGSIP------SGFTSVEVLDLSSNLFN 218 (586)
Q Consensus 167 L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~g~~p------~~l~~L~~L~Ls~N~l~ 218 (586)
|++|++++.. +..+..+++|+.|++++|.+++..+ ..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 8888887642 2678888888888888888875544 12466777777777665
No 118
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=7.1e-16 Score=141.12 Aligned_cols=136 Identities=22% Similarity=0.183 Sum_probs=103.3
Q ss_pred CCCCCCEEEccCCCCC-CCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcE
Q 043706 110 LIQHLRHLDLSNNFFN-GSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTV 188 (586)
Q Consensus 110 ~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 188 (586)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 4478999999999997 78888888899999999999998865 77888999999999999998878887777888888
Q ss_pred EecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCc---HHHHhcCCCCcEEEccCCC
Q 043706 189 VSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSIS---PEFAKRIPQNVTIDLSFNN 264 (586)
Q Consensus 189 L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip---~~~~~~l~~L~~L~Ls~N~ 264 (586)
|+|++|.+++... +..+.. ++|++|++++|.+++..+ ..+. .+++|+.||+++|.
T Consensus 100 L~Ls~N~l~~~~~--------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~-~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 100 LNLSGNKLKDIST--------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFK-LLPQLTYLDGYDRE 158 (168)
T ss_dssp EECBSSSCCSSGG--------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHT-TCSSCCEETTEETT
T ss_pred EeccCCccCcchh--------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHH-hCccCcEecCCCCC
Confidence 8888887774211 022222 567777777777764433 2444 48888899988888
Q ss_pred Cccc
Q 043706 265 LTGA 268 (586)
Q Consensus 265 l~g~ 268 (586)
+...
T Consensus 159 ~~~~ 162 (168)
T 2ell_A 159 DQEA 162 (168)
T ss_dssp SCBC
T ss_pred hhhc
Confidence 7643
No 119
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.64 E-value=5.4e-15 Score=162.81 Aligned_cols=178 Identities=24% Similarity=0.284 Sum_probs=134.6
Q ss_pred ccCCCCCCCCCCCCCcccee--------eCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCC
Q 043706 53 SVLQNWNYDDATPCSWTGVT--------CTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFF 124 (586)
Q Consensus 53 ~~l~~W~~~~~~~C~w~gv~--------C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l 124 (586)
.....|.. ..++|.|.|.. |.. .+++.|++++|+++ .+|..+. ++|+.|+|++|.|
T Consensus 10 ~~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~------------~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l 73 (622)
T 3g06_A 10 AVWSAWRR-AAPAEESRGRAAVVQKMRACLN------------NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNL 73 (622)
T ss_dssp CHHHHHHH-TCCGGGHHHHHHHHHHHHHHHH------------HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCC
T ss_pred HHHHHHHh-cCCcchhccccccCcccccccC------------CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCC
Confidence 34556754 34678997643 322 35889999999998 6777665 8999999999999
Q ss_pred CCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCC
Q 043706 125 NGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF 204 (586)
Q Consensus 125 ~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l 204 (586)
+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|++++ +|. .+++|+.|++++|+|++ +|..+
T Consensus 74 ~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l 140 (622)
T 3g06_A 74 T-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLP 140 (622)
T ss_dssp S-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCC
T ss_pred C-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCC
Confidence 8 5665 57999999999999984 665 78999999999999986 444 67889999999999885 67778
Q ss_pred CCCcEEecccCCCCCcCCcCCCCCcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcc
Q 043706 205 TSVEVLDLSSNLFNGSLPLDFGGGNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTG 267 (586)
Q Consensus 205 ~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g 267 (586)
++|++|+|++|.+++ +|..+ .+|+.|++++|.|+ .+| ..+++|+.|+|++|+|++
T Consensus 141 ~~L~~L~Ls~N~l~~-l~~~~--~~L~~L~L~~N~l~-~l~----~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 141 PGLQELSVSDNQLAS-LPALP--SELCKLWAYNNQLT-SLP----MLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp TTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC
T ss_pred CCCCEEECcCCcCCC-cCCcc--CCCCEEECCCCCCC-CCc----ccCCCCcEEECCCCCCCC
Confidence 889999999998885 33322 46667777777776 345 225666666666666665
No 120
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.64 E-value=7e-16 Score=152.16 Aligned_cols=146 Identities=23% Similarity=0.323 Sum_probs=124.6
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|++++|++.. ++ .+..+++|+.|+|++|.|++..+ +..+++|++|+|++|++++ +|... . ++|+.|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc-c-CcccEEE
Confidence 4689999999999986 44 78999999999999999997655 9999999999999999996 44433 3 9999999
Q ss_pred ccCCCCCCCCchhcCCCCCCcEEecccccCCcCCC-CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCc
Q 043706 167 LSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIP-SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGS 243 (586)
Q Consensus 167 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p-~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ 243 (586)
|++|++++. ..+..+++|+.|+|++|.+++..+ ..+++|+.|+|++|.+++. ..+.. ++|+.|++++|.+++.
T Consensus 113 L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 113 LDNNELRDT--DSLIHLKNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCGGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ccCCccCCC--hhhcCcccccEEECCCCcCCCChHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 999999864 469999999999999999997532 2368999999999999987 45555 8999999999999854
No 121
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=4.1e-16 Score=139.68 Aligned_cols=124 Identities=24% Similarity=0.220 Sum_probs=103.9
Q ss_pred CceEEEEcCCCCCc-ccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 88 FRVISLILPNSQLL-GSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 88 ~~l~~L~L~~n~l~-~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
.+++.|++++|.+. +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57889999999998 78888889999999999999999876 6788899999999999999987888888899999999
Q ss_pred ccCCCCCCC-CchhcCCCCCCcEEecccccCCcCCC---CC---CCCCcEEecc
Q 043706 167 LSVNALAGK-VPRNLTAVKSLTVVSLRSNYFSGSIP---SG---FTSVEVLDLS 213 (586)
Q Consensus 167 L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~g~~p---~~---l~~L~~L~Ls 213 (586)
+++|.+++. .+..+..+++|+.|++++|.+++..+ .. +++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 999999863 44788889999999999998886554 12 4677777765
No 122
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.63 E-value=7.3e-19 Score=192.13 Aligned_cols=177 Identities=17% Similarity=0.194 Sum_probs=125.8
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCC-------------CCCCCCccccCCCCCcEEE-eeCCCCCCCCc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNF-------------FNGSLPLSIFSATELQVLS-LSNNAISGELP 153 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-------------l~g~~p~~~~~l~~L~~L~-Ls~N~l~~~~p 153 (586)
.+++.|+|++|.+. .+|+.++++++|+.|++++|. +.+.+|..+..+++|+.|+ ++.|.+.. ++
T Consensus 349 ~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~-L~ 426 (567)
T 1dce_A 349 EQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD-LR 426 (567)
T ss_dssp TTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH-HH
T ss_pred ccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch-hh
Confidence 34445566666654 456666666666666665553 4455555555555565555 34433210 00
Q ss_pred c------ccCC--CCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCC---CCCCcEEecccCCCCCcCC
Q 043706 154 D------LIGQ--IPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSG---FTSVEVLDLSSNLFNGSLP 222 (586)
Q Consensus 154 ~------~~~~--l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~---l~~L~~L~Ls~N~l~~~~p 222 (586)
. .+.. ...|+.|+|++|+|++ +|. |+.+++|+.|+|++|.|+ .+|.. +++|+.|+|++|.|++ +|
T Consensus 427 ~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 427 SKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG
T ss_pred hhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc
Confidence 0 0000 1258899999999986 676 899999999999999998 67765 4789999999999997 56
Q ss_pred cCCCC-CcccEEEcccCcCCCcC-cHHHHhcCCCCcEEEccCCCCcccCCCC
Q 043706 223 LDFGG-GNLRYLNLSYNKISGSI-SPEFAKRIPQNVTIDLSFNNLTGAIPGA 272 (586)
Q Consensus 223 ~~~~~-~~L~~L~ls~N~l~g~i-p~~~~~~l~~L~~L~Ls~N~l~g~ip~~ 272 (586)
.++. ++|+.|+|++|+|++.+ |..+.. +++|+.|+|++|+|++.+|..
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~-l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVS-CPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGG-CTTCCEEECTTSGGGGSSSCT
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhc-CCCCCEEEecCCcCCCCccHH
Confidence 6666 89999999999999776 888887 999999999999999887644
No 123
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.62 E-value=2.2e-15 Score=155.00 Aligned_cols=191 Identities=16% Similarity=0.099 Sum_probs=149.6
Q ss_pred EEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCc-cccCCCCCCcE-EEccC
Q 043706 92 SLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELP-DLIGQIPRLQL-LNLSV 169 (586)
Q Consensus 92 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~~ 169 (586)
.++.++++++. +|..+ .++|++|+|++|+|+..-+.+|.++++|++|+|++|++.+.+| ..|.++++|.+ +.++.
T Consensus 13 ~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCCS-CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCCc-cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 46778888874 66655 4689999999999996556689999999999999999987666 46889998775 67778
Q ss_pred CCCCCCCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEeccc-CCCCCcCCcCCCC--CcccEEEcccCcCCCc
Q 043706 170 NALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSS-NLFNGSLPLDFGG--GNLRYLNLSYNKISGS 243 (586)
Q Consensus 170 N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~-N~l~~~~p~~~~~--~~L~~L~ls~N~l~g~ 243 (586)
|+++...|..|.++++|++|++++|.+++..+..+ .++..|++.+ |++....+..|.. ..++.|+|++|+|+ .
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~ 168 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-E 168 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-E
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-C
Confidence 99998888999999999999999999997665543 5677888866 5677655556665 57999999999998 7
Q ss_pred CcHHHHhcCCCCcEEEccCCCCcccCCC-CCc-CcccccccccCCc
Q 043706 244 ISPEFAKRIPQNVTIDLSFNNLTGAIPG-ALP-LVNQRMESFSGNV 287 (586)
Q Consensus 244 ip~~~~~~l~~L~~L~Ls~N~l~g~ip~-~~~-~~~~~~~~~~~n~ 287 (586)
||..++. ..+|+.|++++|+.-+.+|. .+. ...+..+.+.+|.
T Consensus 169 i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~ 213 (350)
T 4ay9_X 169 IHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTR 213 (350)
T ss_dssp ECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSC
T ss_pred CChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCC
Confidence 7877776 78899999986544445554 433 4455666666664
No 124
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=1.4e-15 Score=136.23 Aligned_cols=129 Identities=22% Similarity=0.181 Sum_probs=94.4
Q ss_pred CCCCCEEEccCCCCC-CCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEE
Q 043706 111 IQHLRHLDLSNNFFN-GSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVV 189 (586)
Q Consensus 111 l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 189 (586)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 77888888888888888888888865 677888888888888888887777777777777777
Q ss_pred ecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCc---HHHHhcCCCCcEEEccC
Q 043706 190 SLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSIS---PEFAKRIPQNVTIDLSF 262 (586)
Q Consensus 190 ~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip---~~~~~~l~~L~~L~Ls~ 262 (586)
++++|.+++.. .+..+.. ++|++|++++|.+++..+ ..+.. +++|+.||+++
T Consensus 94 ~ls~N~i~~~~--------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~-l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLS--------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKL-LPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHH--------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHH-CTTCCEETTBC
T ss_pred ECCCCcCCChH--------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHH-CCCcccccCCC
Confidence 77777776421 1122333 567777777777775444 24444 89999988864
No 125
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.60 E-value=1.1e-15 Score=153.20 Aligned_cols=96 Identities=14% Similarity=0.230 Sum_probs=81.0
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||+||+|++.+ .||||+++.. .....++|.+|++++++++|||||+++|+|. .+..+||||||++|+
T Consensus 41 ~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGs 117 (307)
T 3omv_A 41 STRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred eeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCC
Confidence 4679999999999999853 5999999754 3344578999999999999999999999985 456899999999999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.++|+..+ ..++|..+.+|+
T Consensus 118 L~~~l~~~~--~~l~~~~~~~i~ 138 (307)
T 3omv_A 118 LYKHLHVQE--TKFQMFQLIDIA 138 (307)
T ss_dssp HHHHHHTSC--CCCCHHHHHHHH
T ss_pred HHHHHhhcC--CCCCHHHHHHHH
Confidence 999998653 358898887765
No 126
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.60 E-value=1.3e-15 Score=153.22 Aligned_cols=95 Identities=15% Similarity=0.150 Sum_probs=78.0
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCC----eEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE----EKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~ey~~~ 559 (586)
.+.||+|+||+||+|++ +|+.||||+++...... ..++.|+..+.+++|||||+++|+|...+ ..+||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~-~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhh-HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 35799999999999998 58999999997554321 33456677778899999999999998754 57999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.++|+.. .++|..+.+|+
T Consensus 86 gsL~~~l~~~----~l~~~~~~~i~ 106 (303)
T 3hmm_A 86 GSLFDYLNRY----TVTVEGMIKLA 106 (303)
T ss_dssp CBHHHHHHHC----CBCHHHHHHHH
T ss_pred CcHHHHHHhC----CCCHHHHHHHH
Confidence 9999999864 47888887764
No 127
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=7.3e-15 Score=137.72 Aligned_cols=106 Identities=28% Similarity=0.307 Sum_probs=85.8
Q ss_pred EEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCC
Q 043706 92 SLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNA 171 (586)
Q Consensus 92 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 171 (586)
.++++++++.. +|..+. ++|+.|+|++|.|+ .+|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 57888888874 555443 57888999999887 677888888889999999998888777888888888888888888
Q ss_pred CCCCCchhcCCCCCCcEEecccccCCcCCC
Q 043706 172 LAGKVPRNLTAVKSLTVVSLRSNYFSGSIP 201 (586)
Q Consensus 172 l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p 201 (586)
|++..|..|.++++|+.|+|++|.|++..+
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~ 119 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPE 119 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCT
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeCh
Confidence 888777788888888888888888775443
No 128
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=9e-15 Score=134.98 Aligned_cols=131 Identities=19% Similarity=0.155 Sum_probs=85.9
Q ss_pred EEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCC
Q 043706 91 ISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVN 170 (586)
Q Consensus 91 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 170 (586)
+.++++++++... |..+ .++|+.|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4577777776653 3322 357777777777777665556677777777777777777666666677777777777777
Q ss_pred CCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCc
Q 043706 171 ALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSIS 245 (586)
Q Consensus 171 ~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip 245 (586)
++++..+..+..+++|+.|+|++|.|++..+ ..+.. ++|++|+|++|.+++..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~---------------------~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPD---------------------GIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCT---------------------TTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCH---------------------HHhcCCcccCEEEecCCCeeccCc
Confidence 7776655566666666666666666653332 22333 567777777777776554
No 129
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.59 E-value=2.6e-15 Score=152.87 Aligned_cols=99 Identities=18% Similarity=0.223 Sum_probs=76.5
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||+||+|+. .+|+.||||+++.. .....+.|.+|+++|++++|||||++++++.+.+..|||||||++|
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 35799999999999997 57999999999754 3344577999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.++|+.+ +...++......|
T Consensus 109 ~L~~~i~~~-~~~~~~e~~~~~~ 130 (350)
T 4b9d_A 109 DLFKRINAQ-KGVLFQEDQILDW 130 (350)
T ss_dssp BHHHHHHHT-TTCCCCHHHHHHH
T ss_pred cHHHHHHHc-CCCCCCHHHHHHH
Confidence 999999865 2233455444433
No 130
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.58 E-value=5.5e-17 Score=173.30 Aligned_cols=201 Identities=20% Similarity=0.124 Sum_probs=141.1
Q ss_pred CCceEEEEcCCCCCcccCccccC-----CCCCCCEEEccCCCCCCC----CCccccCCCCCcEEEeeCCCCCCCC-----
Q 043706 87 MFRVISLILPNSQLLGSVTKDLG-----LIQHLRHLDLSNNFFNGS----LPLSIFSATELQVLSLSNNAISGEL----- 152 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~----- 152 (586)
+++++.|+|++|.+.+..+..+. .+++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++..
T Consensus 169 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~ 248 (461)
T 1z7x_W 169 KPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELC 248 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHH
Confidence 36788899999988765554443 366889999999988864 5777778888999999998887532
Q ss_pred ccccCCCCCCcEEEccCCCCCCC----CchhcCCCCCCcEEecccccCCcCCCCC--------CCCCcEEecccCCCCCc
Q 043706 153 PDLIGQIPRLQLLNLSVNALAGK----VPRNLTAVKSLTVVSLRSNYFSGSIPSG--------FTSVEVLDLSSNLFNGS 220 (586)
Q Consensus 153 p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~g~~p~~--------l~~L~~L~Ls~N~l~~~ 220 (586)
+..+..+++|++|+|++|.++.. ++..+..+++|+.|+|++|.+++..+.. .++|+.|+|++|.+++.
T Consensus 249 ~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 328 (461)
T 1z7x_W 249 PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 328 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchH
Confidence 23334688899999999888854 5667777888889999888886543222 25888888888888765
Q ss_pred C----CcCCCC-CcccEEEcccCcCCCcCcHHHHhc----CCCCcEEEccCCCCcc----cCCCCCc-CcccccccccCC
Q 043706 221 L----PLDFGG-GNLRYLNLSYNKISGSISPEFAKR----IPQNVTIDLSFNNLTG----AIPGALP-LVNQRMESFSGN 286 (586)
Q Consensus 221 ~----p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~----l~~L~~L~Ls~N~l~g----~ip~~~~-~~~~~~~~~~~n 286 (586)
. +..+.. ++|++|+|++|.+++..+..+... .++|+.|+|++|++++ .+|..+. ...+..+.+.+|
T Consensus 329 ~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 329 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp GHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred HHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCC
Confidence 3 333333 788888888888876555555432 4588888888888875 5554332 334455555555
Q ss_pred c
Q 043706 287 V 287 (586)
Q Consensus 287 ~ 287 (586)
.
T Consensus 409 ~ 409 (461)
T 1z7x_W 409 C 409 (461)
T ss_dssp S
T ss_pred C
Confidence 4
No 131
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.58 E-value=3.5e-15 Score=148.46 Aligned_cols=97 Identities=13% Similarity=0.242 Sum_probs=80.7
Q ss_pred ceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEe----CCeEEEEEecc
Q 043706 485 YILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWE----DEEKLLIHDYV 557 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ey~ 557 (586)
..||+|+||.||+|.. .+|..||+|++... .....+.|.+|++++++++|||||+++++|.. .+..+||||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 4699999999999998 47999999999654 33445779999999999999999999999875 24578999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.++|+.. ..+++.....|+
T Consensus 112 ~gg~L~~~l~~~---~~l~~~~~~~~~ 135 (290)
T 3fpq_A 112 TSGTLKTYLKRF---KVMKIKVLRSWC 135 (290)
T ss_dssp CSCBHHHHHHHH---SSCCHHHHHHHH
T ss_pred CCCCHHHHHHhc---CCCCHHHHHHHH
Confidence 999999999865 346777665554
No 132
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.56 E-value=3.1e-15 Score=152.13 Aligned_cols=95 Identities=19% Similarity=0.278 Sum_probs=81.8
Q ss_pred ceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 485 YILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++...+..+||||||++|+|.
T Consensus 80 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~ 159 (346)
T 4fih_A 80 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159 (346)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred EEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence 4699999999999998 479999999997655544567899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccHHhhccc
Q 043706 564 SFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~ 583 (586)
+++... .+++.....|
T Consensus 160 ~~l~~~----~l~e~~~~~~ 175 (346)
T 4fih_A 160 DIVTHT----RMNEEQIAAV 175 (346)
T ss_dssp HHHHHS----CCCHHHHHHH
T ss_pred HHHHcC----CCCHHHHHHH
Confidence 999753 3556554444
No 133
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.56 E-value=5e-17 Score=173.57 Aligned_cols=199 Identities=19% Similarity=0.132 Sum_probs=154.4
Q ss_pred CceEEEEcCCCCCccc----CccccCCCCCCCEEEccCCCCCCCCCcccc-----CCCCCcEEEeeCCCCCCC----Ccc
Q 043706 88 FRVISLILPNSQLLGS----VTKDLGLIQHLRHLDLSNNFFNGSLPLSIF-----SATELQVLSLSNNAISGE----LPD 154 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~----~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~ 154 (586)
.+++.|+|++|.+.+. ++..+..+++|+.|+|++|.+++..+..+. .+++|++|+|++|.+++. ++.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 5799999999999874 466677889999999999999765554443 367999999999999874 577
Q ss_pred ccCCCCCCcEEEccCCCCCCCC-----chhcCCCCCCcEEecccccCCcC----CCCC---CCCCcEEecccCCCCCcCC
Q 043706 155 LIGQIPRLQLLNLSVNALAGKV-----PRNLTAVKSLTVVSLRSNYFSGS----IPSG---FTSVEVLDLSSNLFNGSLP 222 (586)
Q Consensus 155 ~~~~l~~L~~L~L~~N~l~~~~-----p~~l~~l~~L~~L~L~~N~l~g~----~p~~---l~~L~~L~Ls~N~l~~~~p 222 (586)
.+..+++|++|+|++|.+++.. +..+..+++|+.|+|++|.+++. ++.. +++|++|+|++|.+++..+
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 301 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGA 301 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHH
Confidence 8889999999999999987543 22334689999999999999864 4443 5899999999999986554
Q ss_pred cCCCC------CcccEEEcccCcCCCc----CcHHHHhcCCCCcEEEccCCCCcccCCCCCc------CcccccccccCC
Q 043706 223 LDFGG------GNLRYLNLSYNKISGS----ISPEFAKRIPQNVTIDLSFNNLTGAIPGALP------LVNQRMESFSGN 286 (586)
Q Consensus 223 ~~~~~------~~L~~L~ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~------~~~~~~~~~~~n 286 (586)
..+.. ++|++|+|++|.+++. ++..+.. +++|+.|||++|++++..+..+. ...+..+.+.+|
T Consensus 302 ~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~-~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 302 RLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQ-NRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHH-CSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhh-CCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 44432 5999999999999865 4555555 89999999999999876443321 234555555555
Q ss_pred c
Q 043706 287 V 287 (586)
Q Consensus 287 ~ 287 (586)
.
T Consensus 381 ~ 381 (461)
T 1z7x_W 381 D 381 (461)
T ss_dssp C
T ss_pred C
Confidence 3
No 134
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.55 E-value=2.1e-14 Score=131.72 Aligned_cols=88 Identities=24% Similarity=0.213 Sum_probs=56.7
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEec
Q 043706 112 QHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSL 191 (586)
Q Consensus 112 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 191 (586)
++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 109 (170)
T 3g39_A 30 TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWL 109 (170)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEe
Confidence 55666666666666666666666666666666666666555555666666666666666666555555666666666666
Q ss_pred ccccCCcC
Q 043706 192 RSNYFSGS 199 (586)
Q Consensus 192 ~~N~l~g~ 199 (586)
++|.++..
T Consensus 110 ~~N~~~c~ 117 (170)
T 3g39_A 110 LNNPWDCA 117 (170)
T ss_dssp CSSCBCTT
T ss_pred CCCCCCCC
Confidence 66666543
No 135
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.53 E-value=1e-14 Score=152.07 Aligned_cols=95 Identities=19% Similarity=0.278 Sum_probs=81.4
Q ss_pred ceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 485 YILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++|++++|||||++++++...+..|||||||++|+|.
T Consensus 157 ~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~ 236 (423)
T 4fie_A 157 IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236 (423)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred eEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence 4699999999999998 479999999997665545567999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccHHhhccc
Q 043706 564 SFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~ 583 (586)
+++... .+++.....|
T Consensus 237 ~~i~~~----~l~e~~~~~~ 252 (423)
T 4fie_A 237 DIVTHT----RMNEEQIAAV 252 (423)
T ss_dssp HHHHHS----CCCHHHHHHH
T ss_pred HHHhcc----CCCHHHHHHH
Confidence 999754 2555544433
No 136
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.52 E-value=2.8e-14 Score=143.01 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=77.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCC------------e
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE------------E 549 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------------~ 549 (586)
.+.||+|+||.||+|+. .+|+.||||+++... ....+.|.+|+++|++++|||||++++++...+ .
T Consensus 10 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~ 89 (299)
T 4g31_A 10 IQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVY 89 (299)
T ss_dssp EEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEE
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcE
Confidence 35799999999999997 479999999997543 334567999999999999999999999987644 3
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccHHhhc
Q 043706 550 KLLIHDYVSNGCLASFSFTHASKFHLFFAIIH 581 (586)
Q Consensus 550 ~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~ 581 (586)
.++|||||++|+|.+++..+......+|....
T Consensus 90 l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~ 121 (299)
T 4g31_A 90 LYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121 (299)
T ss_dssp EEEEEECCCSCCHHHHHHTCCSGGGSCHHHHH
T ss_pred EEEEEecCCCCcHHHHHHhcCCCChhHHHHHH
Confidence 68999999999999999876333344554433
No 137
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.52 E-value=1.5e-14 Score=144.88 Aligned_cols=86 Identities=23% Similarity=0.246 Sum_probs=76.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+..+||||||++
T Consensus 37 ~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~g 116 (311)
T 4aw0_A 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 45799999999999997 579999999997542 23356799999999999999999999999999999999999999
Q ss_pred CCHHHHHhcc
Q 043706 560 GCLASFSFTH 569 (586)
Q Consensus 560 GsL~~~L~~~ 569 (586)
|+|.++|...
T Consensus 117 G~L~~~i~~~ 126 (311)
T 4aw0_A 117 GELLKYIRKI 126 (311)
T ss_dssp EEHHHHHHHH
T ss_pred CCHHHHHHHc
Confidence 9999999864
No 138
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.51 E-value=4.3e-14 Score=154.37 Aligned_cols=118 Identities=20% Similarity=0.189 Sum_probs=82.4
Q ss_pred CCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecc
Q 043706 113 HLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLR 192 (586)
Q Consensus 113 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 192 (586)
.|+.|+|++|.|++ +|. +..+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .++++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47777777777775 565 777777777777777777 667777777777777777777775 55 67777777777777
Q ss_pred cccCCcCC-CCC---CCCCcEEecccCCCCCcCCcCCC----CCcccEEEc
Q 043706 193 SNYFSGSI-PSG---FTSVEVLDLSSNLFNGSLPLDFG----GGNLRYLNL 235 (586)
Q Consensus 193 ~N~l~g~~-p~~---l~~L~~L~Ls~N~l~~~~p~~~~----~~~L~~L~l 235 (586)
+|.|++.. |.. +++|+.|+|++|.|++..|.... .++|+.|++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 77777665 554 36777777777777765543211 166777754
No 139
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.51 E-value=1.4e-14 Score=146.82 Aligned_cols=93 Identities=18% Similarity=0.079 Sum_probs=79.5
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+.+..+||||||++|+|
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 35699999999999998 4799999999975432 24799999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhcccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.++|+.. ..+++.....|+
T Consensus 138 ~~~l~~~---~~l~e~~~~~~~ 156 (336)
T 4g3f_A 138 GQLIKQM---GCLPEDRALYYL 156 (336)
T ss_dssp HHHHHHH---SSCCHHHHHHHH
T ss_pred HHHHHHc---CCCCHHHHHHHH
Confidence 9999865 346776665554
No 140
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=1.1e-13 Score=126.95 Aligned_cols=112 Identities=21% Similarity=0.199 Sum_probs=91.3
Q ss_pred CCCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEE
Q 043706 63 ATPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLS 142 (586)
Q Consensus 63 ~~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 142 (586)
.+.|.|+.+.|.+.+++.+|.... .+++.|+|++|.+.+..|..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 6 ~C~C~~~~l~~s~n~l~~ip~~~~-~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 84 (170)
T 3g39_A 6 QCSCSGTTVDCSGKSLASVPTGIP-TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLS 84 (170)
T ss_dssp CCEEETTEEECTTSCCSSCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCcCCCEEEeCCCCcCccCccCC-CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEE
Confidence 345788888888888888887664 6788888888888888888888888888888888888877666778888888888
Q ss_pred eeCCCCCCCCccccCCCCCCcEEEccCCCCCCC
Q 043706 143 LSNNAISGELPDLIGQIPRLQLLNLSVNALAGK 175 (586)
Q Consensus 143 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 175 (586)
|++|+|++..+..|..+++|++|+|++|.++..
T Consensus 85 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 85 LNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 888888877777788888888888888888754
No 141
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.50 E-value=2.1e-14 Score=147.05 Aligned_cols=101 Identities=20% Similarity=0.215 Sum_probs=82.2
Q ss_pred cceeecCCceEEEEEEeC------CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCC-CCccceeEEEEeC-CeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVLA------DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKH-PNLVKLRGFYWED-EEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~------~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H-~niv~l~g~~~~~-~~~~lv~ 554 (586)
.+.||+|+||.||+|++. .++.||||+++... ....++|.+|+++|.+++| ||||+++|+|... +..+|||
T Consensus 69 ~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~ 148 (353)
T 4ase_A 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 148 (353)
T ss_dssp EEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEE
Confidence 468999999999999863 24689999997653 3445779999999999965 8999999999775 5689999
Q ss_pred eccCCCCHHHHHhccCC-------------CCCccHHhhcccc
Q 043706 555 DYVSNGCLASFSFTHAS-------------KFHLFFAIIHPFG 584 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~-------------~~~l~w~~r~~~~ 584 (586)
|||++|+|.++|+.... ...|+|..+.+|+
T Consensus 149 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 191 (353)
T 4ase_A 149 EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191 (353)
T ss_dssp ECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHH
T ss_pred EcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHH
Confidence 99999999999986421 2458888877664
No 142
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2.9e-14 Score=131.50 Aligned_cols=133 Identities=20% Similarity=0.169 Sum_probs=68.6
Q ss_pred cCCCCCCCEEEccCCCCCCCCCccccCCC-CCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCC
Q 043706 108 LGLIQHLRHLDLSNNFFNGSLPLSIFSAT-ELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSL 186 (586)
Q Consensus 108 l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 186 (586)
+.++.+|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..+..+++|++|+|++|++++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 3345555555555555552 232 33332 555555555555532 345555555555555555553333333455555
Q ss_pred cEEecccccCCcCCCCCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHH----HHhcCCCCcEEEcc
Q 043706 187 TVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPE----FAKRIPQNVTIDLS 261 (586)
Q Consensus 187 ~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~----~~~~l~~L~~L~Ls 261 (586)
++|+|++|.|+. +|. ...+.. ++|+.|++++|.++ .+|.. +.. +++|+.||++
T Consensus 91 ~~L~L~~N~i~~-~~~-------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~-l~~L~~Ld~~ 148 (176)
T 1a9n_A 91 TELILTNNSLVE-LGD-------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYK-VPQVRVLDFQ 148 (176)
T ss_dssp CEEECCSCCCCC-GGG-------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHH-CTTCSEETTE
T ss_pred CEEECCCCcCCc-chh-------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHH-CCccceeCCC
Confidence 555555554431 111 002222 45666666666665 44554 444 8888888888
Q ss_pred CCCCc
Q 043706 262 FNNLT 266 (586)
Q Consensus 262 ~N~l~ 266 (586)
.|.+.
T Consensus 149 ~n~~~ 153 (176)
T 1a9n_A 149 KVKLK 153 (176)
T ss_dssp ECCHH
T ss_pred cCCHH
Confidence 88765
No 143
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=8.7e-17 Score=151.54 Aligned_cols=150 Identities=23% Similarity=0.290 Sum_probs=72.8
Q ss_pred ceEEEEcCCCCCcccCcc------ccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCC
Q 043706 89 RVISLILPNSQLLGSVTK------DLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRL 162 (586)
Q Consensus 89 ~l~~L~L~~n~l~~~~~~------~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 162 (586)
+++.++++.+.+.|.+|. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444444443 44555555555555555543 33 4444555555555555554 344444444455
Q ss_pred cEEEccCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCCCCCcEEecccCCCCCcCC-cCCCC-CcccEEEcccCcC
Q 043706 163 QLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGFTSVEVLDLSSNLFNGSLP-LDFGG-GNLRYLNLSYNKI 240 (586)
Q Consensus 163 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l~~L~~L~Ls~N~l~~~~p-~~~~~-~~L~~L~ls~N~l 240 (586)
++|+|++|++++ +| .+..+++|+.|+|++|.+ ++..+ ..+.. ++|++|++++|.+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i---------------------~~~~~~~~l~~l~~L~~L~l~~N~l 152 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKI---------------------TNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEEC---------------------CCHHHHHHHTTTTTCSEEEECSCHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcC---------------------CchhHHHHHhcCCCCCEEEecCCcc
Confidence 555555555543 22 344444444444444444 32211 12322 5666666666666
Q ss_pred CCcCcH---------HHHhcCCCCcEEEccCCCCc
Q 043706 241 SGSISP---------EFAKRIPQNVTIDLSFNNLT 266 (586)
Q Consensus 241 ~g~ip~---------~~~~~l~~L~~L~Ls~N~l~ 266 (586)
++.+|. .....+++|+.|| +|.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 153 YNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred ccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 554433 2222378888776 55544
No 144
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=4.4e-14 Score=130.27 Aligned_cols=125 Identities=24% Similarity=0.214 Sum_probs=101.8
Q ss_pred CCceEEEEcCCCCCcccCccccCCCC-CCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQ-HLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLL 165 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 165 (586)
+.+++.|+|++|++... +. +..+. +|++|+|++|.|++. ..+..+++|++|+|++|+|++..+..+..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 46899999999999854 54 55554 999999999999975 689999999999999999997665667999999999
Q ss_pred EccCCCCCCCCch--hcCCCCCCcEEecccccCCcCCCCC-------CCCCcEEecccCCC
Q 043706 166 NLSVNALAGKVPR--NLTAVKSLTVVSLRSNYFSGSIPSG-------FTSVEVLDLSSNLF 217 (586)
Q Consensus 166 ~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~g~~p~~-------l~~L~~L~Ls~N~l 217 (586)
+|++|+++ .+|. .+..+++|+.|++++|.++. +|.. +++|+.||+++|.+
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 99999996 5666 78899999999999999974 3431 35566666655544
No 145
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.7e-13 Score=126.01 Aligned_cols=104 Identities=23% Similarity=0.214 Sum_probs=83.0
Q ss_pred EEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCC
Q 043706 92 SLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNA 171 (586)
Q Consensus 92 ~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 171 (586)
.+++++|++. .+|..+. ++|+.|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 5677777774 4555553 788888888888888888888888888888888888887666677888888888888888
Q ss_pred CCCCCchhcCCCCCCcEEecccccCCc
Q 043706 172 LAGKVPRNLTAVKSLTVVSLRSNYFSG 198 (586)
Q Consensus 172 l~~~~p~~l~~l~~L~~L~L~~N~l~g 198 (586)
|++..+..|..+++|+.|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 886666668888888888888887763
No 146
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=2.2e-13 Score=125.30 Aligned_cols=111 Identities=19% Similarity=0.201 Sum_probs=100.9
Q ss_pred CCCCccceeeCCCCCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEe
Q 043706 64 TPCSWTGVTCTQIDATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSL 143 (586)
Q Consensus 64 ~~C~w~gv~C~~~~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 143 (586)
+.|....+.|.+.+++.+|.... .+++.|+|++|.+.+..|..|+.+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 10 C~C~~~~l~~~~n~l~~iP~~~~-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L 88 (174)
T 2r9u_A 10 CSCDQTLVNCQNIRLASVPAGIP-TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDL 88 (174)
T ss_dssp SEECSSEEECCSSCCSSCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEECCcEEEeCCCCCCccCCCcC-CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEEC
Confidence 44678889999999999998776 88999999999999999999999999999999999999876667889999999999
Q ss_pred eCCCCCCCCccccCCCCCCcEEEccCCCCCCC
Q 043706 144 SNNAISGELPDLIGQIPRLQLLNLSVNALAGK 175 (586)
Q Consensus 144 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 175 (586)
++|+|++..+..|..+++|++|+|++|.+...
T Consensus 89 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 89 NDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CCCccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 99999987777799999999999999999844
No 147
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=1.2e-16 Score=150.48 Aligned_cols=111 Identities=23% Similarity=0.249 Sum_probs=98.5
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEE
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLN 166 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (586)
+.+++.|+|++|.+.+ +| .+..+++|++|+|++|.|+ .+|..+..+++|++|+|++|++++ +| .+..+++|++|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 5789999999999988 66 8999999999999999998 678888888999999999999996 55 688999999999
Q ss_pred ccCCCCCCCCc-hhcCCCCCCcEEecccccCCcCCCC
Q 043706 167 LSVNALAGKVP-RNLTAVKSLTVVSLRSNYFSGSIPS 202 (586)
Q Consensus 167 L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~g~~p~ 202 (586)
|++|++++..+ ..+..+++|++|++++|.+++.+|.
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999986433 5789999999999999999877664
No 148
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.46 E-value=1e-13 Score=136.71 Aligned_cols=96 Identities=18% Similarity=0.243 Sum_probs=75.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||+||+|+. .+|+.||||+++... ....+.|.+|++++++++|||||++++++...+..++||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 35799999999999997 479999999996542 233467999999999999999999999999999999999999 6
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.++|..+ ..++......|
T Consensus 97 g~L~~~l~~~---~~l~e~~~~~~ 117 (275)
T 3hyh_A 97 NELFDYIVQR---DKMSEQEARRF 117 (275)
T ss_dssp EEHHHHHHHS---CSCCHHHHHHH
T ss_pred CCHHHHHHHc---CCCCHHHHHHH
Confidence 8999999765 23555544444
No 149
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.42 E-value=3.7e-14 Score=141.87 Aligned_cols=96 Identities=15% Similarity=0.131 Sum_probs=73.4
Q ss_pred cceeecCCceEEEEEEe----CCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL----ADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~----~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||+||+|+. ..++.||||+++... ......|.+|+++|.+++|||||++++++.+.+..+||||||
T Consensus 29 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~ 108 (304)
T 3ubd_A 29 LKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108 (304)
T ss_dssp EEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCC
T ss_pred EEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcC
Confidence 35799999999999986 257899999996542 222346889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
++|+|.++|... ..++......
T Consensus 109 ~gg~L~~~l~~~---~~l~e~~~~~ 130 (304)
T 3ubd_A 109 RGGDLFTRLSKE---VMFTEEDVKF 130 (304)
T ss_dssp TTCEEHHHHHHH---CCCCHHHHHH
T ss_pred CCCCHHHHHHhc---CCCCHHHHHH
Confidence 999999999865 2345544433
No 150
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.41 E-value=6.7e-13 Score=136.14 Aligned_cols=108 Identities=24% Similarity=0.301 Sum_probs=64.7
Q ss_pred CCCccceeeCCC-CCCCcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccC-CCCCCCCCccccCCCCCcEEE
Q 043706 65 PCSWTGVTCTQI-DATTIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSN-NFFNGSLPLSIFSATELQVLS 142 (586)
Q Consensus 65 ~C~w~gv~C~~~-~~~~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~ 142 (586)
.|.|..|.|.+. +++.+ |. |..+++|+.|+|++ |.|++..+..|.++++|++|+
T Consensus 7 ~C~~~~v~~~~~n~l~~i-----------------------p~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~ 62 (347)
T 2ifg_A 7 PHGSSGLRCTRDGALDSL-----------------------HH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLT 62 (347)
T ss_dssp CSSSSCEECCSSCCCTTT-----------------------TT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEE
T ss_pred cccCCEEEcCCCCCCCcc-----------------------CC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEE
Confidence 588988888764 44444 44 55555666666654 666555555566666666666
Q ss_pred eeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccCC
Q 043706 143 LSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYFS 197 (586)
Q Consensus 143 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 197 (586)
|++|+|++..|..|.+|++|+.|+|++|+|++..+..|..++ |+.|+|.+|.|.
T Consensus 63 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 63 IVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 666666655555666666666666666666644444444444 666666666655
No 151
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.39 E-value=7.5e-13 Score=144.62 Aligned_cols=95 Identities=19% Similarity=0.260 Sum_probs=82.4
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|+. .+|+.||+|.+........+.+.+|+++|+.++|||||++++++...+..+||||||++|+|
T Consensus 162 ~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L 241 (573)
T 3uto_A 162 HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241 (573)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcH
Confidence 45799999999999998 47999999999877666667899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhh
Q 043706 563 ASFSFTHASKFHLFFAII 580 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r 580 (586)
.++|..+.+ .++....
T Consensus 242 ~~~i~~~~~--~l~e~~~ 257 (573)
T 3uto_A 242 FEKVADEHN--KMSEDEA 257 (573)
T ss_dssp HHHHTCTTS--CEEHHHH
T ss_pred HHHHHHhCC--CCCHHHH
Confidence 999975422 3555443
No 152
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.35 E-value=2.6e-12 Score=129.46 Aligned_cols=99 Identities=18% Similarity=0.282 Sum_probs=87.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||++.. .+|..||+|++........+.|.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 46899999999999998 47999999999776666678899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhcccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.+++.... ..++|..+.+|+
T Consensus 95 ~~~l~~~~--~~~~~~~~~~i~ 114 (310)
T 3s95_A 95 RGIIKSMD--SQYPWSQRVSFA 114 (310)
T ss_dssp HHHHHHCC--TTSCHHHHHHHH
T ss_pred HHHHHhcc--CCCCHHHHHHHH
Confidence 99998742 347787776654
No 153
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.34 E-value=2.9e-12 Score=129.99 Aligned_cols=96 Identities=21% Similarity=0.209 Sum_probs=84.1
Q ss_pred ceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 485 YILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
+.||+|+||.||+|+.. +|+.||||++........+.|.+|+.++.+++||||++++++|...+..++||||+++|+|.
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~ 130 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHH
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHH
Confidence 47999999999999985 79999999997766556678999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccHHhhcccc
Q 043706 564 SFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++... .++|..+.+++
T Consensus 131 ~~l~~~----~l~~~~~~~i~ 147 (321)
T 2c30_A 131 DIVSQV----RLNEEQIATVC 147 (321)
T ss_dssp HHHTTC----CCCHHHHHHHH
T ss_pred HHHHhc----CCCHHHHHHHH
Confidence 998643 46777665543
No 154
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=3.3e-12 Score=130.97 Aligned_cols=103 Identities=18% Similarity=0.132 Sum_probs=92.3
Q ss_pred CEEEccCC-CCCCCCCccccCCCCCcEEEeeC-CCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecc
Q 043706 115 RHLDLSNN-FFNGSLPLSIFSATELQVLSLSN-NAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLR 192 (586)
Q Consensus 115 ~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 192 (586)
..++++++ +|+ .+|. +..+++|++|+|++ |+|++..+..|.+|++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688887 888 4888 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred cccCCcCCCCCC--CCCcEEecccCCCCC
Q 043706 193 SNYFSGSIPSGF--TSVEVLDLSSNLFNG 219 (586)
Q Consensus 193 ~N~l~g~~p~~l--~~L~~L~Ls~N~l~~ 219 (586)
+|+|++..+..+ ..|+.|+|.+|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 999997666655 349999999999874
No 155
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.33 E-value=2e-12 Score=134.68 Aligned_cols=96 Identities=15% Similarity=0.237 Sum_probs=77.3
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeC------CeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWED------EEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lv~ 554 (586)
.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++|..++|||||++++++... +..+|||
T Consensus 59 ~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivm 138 (398)
T 4b99_A 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVL 138 (398)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEE
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEE
Confidence 35799999999999997 579999999997542 33456789999999999999999999987643 5789999
Q ss_pred eccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 555 DYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|||+ |+|.++|... ..+++.....|
T Consensus 139 E~~~-g~L~~~i~~~---~~l~~~~~~~~ 163 (398)
T 4b99_A 139 DLME-SDLHQIIHSS---QPLTLEHVRYF 163 (398)
T ss_dssp ECCS-EEHHHHHTSS---SCCCHHHHHHH
T ss_pred eCCC-CCHHHHHHhc---CCCCHHHHHHH
Confidence 9996 7899999764 34555544433
No 156
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.32 E-value=1.1e-12 Score=133.01 Aligned_cols=101 Identities=25% Similarity=0.444 Sum_probs=88.7
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
...||+|+||.||+|+..+|..||||++........++|.+|++++.+++||||++++++|...+..++||||+++|+|.
T Consensus 44 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 123 (321)
T 2qkw_B 44 KFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLK 123 (321)
T ss_dssp CCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTG
T ss_pred cceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHH
Confidence 46799999999999998889999999998766666688999999999999999999999999999999999999999999
Q ss_pred HHHhccC-CCCCccHHhhcccc
Q 043706 564 SFSFTHA-SKFHLFFAIIHPFG 584 (586)
Q Consensus 564 ~~L~~~~-~~~~l~w~~r~~~~ 584 (586)
++++... ....++|..+.+|+
T Consensus 124 ~~l~~~~~~~~~~~~~~~~~i~ 145 (321)
T 2qkw_B 124 RHLYGSDLPTMSMSWEQRLEIC 145 (321)
T ss_dssp GGSSSSCCCSCCCCHHHHHHHH
T ss_pred HHHhccCCCccccCHHHHHHHH
Confidence 9998653 23468888777664
No 157
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.31 E-value=1.7e-12 Score=131.79 Aligned_cols=114 Identities=32% Similarity=0.391 Sum_probs=93.2
Q ss_pred cccccHHHHhhcc-----cceeecCCceEEEEEEeCCCcEEEEEEecccch-hhHHHHHHHHHHHHccCCCCccceeEEE
Q 043706 471 ETELEVETLFKAS-----AYILCTSSSSIVYKAVLADGTTLAVRRIGETCF-ERLKDLESQVKAIAKLKHPNLVKLRGFY 544 (586)
Q Consensus 471 ~~~~~~~~l~~a~-----~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~ 544 (586)
...|+++++..+. .+.||+|+||.||+|...+|+.||||++..... .....|.+|++++..++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3467777776654 468999999999999988899999999976532 2224699999999999999999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhccC-CCCCccHHhhcccc
Q 043706 545 WEDEEKLLIHDYVSNGCLASFSFTHA-SKFHLFFAIIHPFG 584 (586)
Q Consensus 545 ~~~~~~~lv~ey~~~GsL~~~L~~~~-~~~~l~w~~r~~~~ 584 (586)
...+..++||||+++|+|.++++... ....++|..+.+|+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~ 137 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHH
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHH
Confidence 99999999999999999999998762 34568888776654
No 158
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.30 E-value=6.6e-12 Score=126.18 Aligned_cols=112 Identities=22% Similarity=0.316 Sum_probs=92.7
Q ss_pred ccccHHHHhhcc-----------cceeecCCceEEEEEEeCCCcEEEEEEeccc----chhhHHHHHHHHHHHHccCCCC
Q 043706 472 TELEVETLFKAS-----------AYILCTSSSSIVYKAVLADGTTLAVRRIGET----CFERLKDLESQVKAIAKLKHPN 536 (586)
Q Consensus 472 ~~~~~~~l~~a~-----------~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~----~~~~~~~f~~e~~~l~~l~H~n 536 (586)
..|+++++..++ ++.||+|+||.||+|.. ++..||||++... .....+.|.+|++++.+++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 356777777664 26899999999999987 6889999999653 2233577999999999999999
Q ss_pred ccceeEEEEeCCeEEEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 537 LVKLRGFYWEDEEKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 537 iv~l~g~~~~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+++++++...+..++||||+++|+|.+++........++|..+.+++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~ 139 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 139 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHH
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHH
Confidence 999999999999999999999999999999865444568888776654
No 159
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.29 E-value=3.5e-12 Score=132.19 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=80.0
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.++||+|+||.||+|.. .+|..||+|+++.......++|.+|++++.+++||||++++++|...+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 45799999999999997 47999999999877666668899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++... ...+++..+.++
T Consensus 174 ~~~l~~~--~~~l~~~~~~~i 192 (373)
T 2x4f_A 174 FDRIIDE--SYNLTELDTILF 192 (373)
T ss_dssp HHHHHHT--GGGCCHHHHHHH
T ss_pred HHHHHhc--CCCCCHHHHHHH
Confidence 9999754 234666665544
No 160
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.28 E-value=8.9e-12 Score=122.75 Aligned_cols=97 Identities=20% Similarity=0.330 Sum_probs=83.0
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.+.||+|+||.||+|...++..||+|++...... .++|.+|++++.+++||||+++++++...+..++||||+++|+|.
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 15 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eheecCCCccEEEEEEecCCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 3579999999999999988899999999765433 367999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccHHhhccc
Q 043706 564 SFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~ 583 (586)
++++... ..+++..+.+|
T Consensus 94 ~~l~~~~--~~~~~~~~~~i 111 (269)
T 4hcu_A 94 DYLRTQR--GLFAAETLLGM 111 (269)
T ss_dssp HHHHTTT--TCCCHHHHHHH
T ss_pred HHHHhcC--cccCHHHHHHH
Confidence 9997642 24666665554
No 161
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.27 E-value=1.1e-11 Score=125.70 Aligned_cols=99 Identities=18% Similarity=0.170 Sum_probs=79.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCC-------------
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE------------- 548 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------------- 548 (586)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.|.+|++++.+++|||||+++++|...+
T Consensus 11 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~ 90 (332)
T 3qd2_B 11 IQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWL 90 (332)
T ss_dssp EEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC---
T ss_pred eeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhh
Confidence 457999999999999985 89999999997543 334577999999999999999999999986643
Q ss_pred --------------------------------------------eEEEEEeccCCCCHHHHHhccCCCCCccHHhhcc
Q 043706 549 --------------------------------------------EKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 549 --------------------------------------------~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
..++||||+++|+|.+++.........+|..+.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ 168 (332)
T 3qd2_B 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLH 168 (332)
T ss_dssp -----------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHH
T ss_pred ccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHH
Confidence 3789999999999999998764434455544433
No 162
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.27 E-value=5.4e-12 Score=127.29 Aligned_cols=100 Identities=21% Similarity=0.271 Sum_probs=83.9
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+. +|+.||||++.... ....++|.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 42 ~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 120 (309)
T 3p86_A 42 KEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGS 120 (309)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCB
T ss_pred eeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCc
Confidence 46799999999999987 68899999997553 3445679999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.++++.......+++..+.+|+
T Consensus 121 L~~~l~~~~~~~~~~~~~~~~i~ 143 (309)
T 3p86_A 121 LYRLLHKSGAREQLDERRRLSMA 143 (309)
T ss_dssp HHHHHHSTTHHHHSCHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCHHHHHHHH
Confidence 99999865333347777665543
No 163
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.27 E-value=1.1e-11 Score=124.07 Aligned_cols=96 Identities=19% Similarity=0.262 Sum_probs=82.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 35799999999999997 57999999999766555567899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++... .+++..+.+|
T Consensus 105 ~~~~~~~----~~~~~~~~~~ 121 (297)
T 3fxz_A 105 TDVVTET----CMDEGQIAAV 121 (297)
T ss_dssp HHHHHHS----CCCHHHHHHH
T ss_pred HHHHhhc----CCCHHHHHHH
Confidence 9999764 2455544433
No 164
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.27 E-value=5.7e-12 Score=130.65 Aligned_cols=99 Identities=16% Similarity=0.315 Sum_probs=83.1
Q ss_pred cceeecCCceEEEEEEeC----CCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA----DGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+|+.. ++..||||+++.. .....++|.+|++++.+++||||++++++|...+..++||||++
T Consensus 50 ~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 129 (373)
T 2qol_A 50 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYME 129 (373)
T ss_dssp CEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred eeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCC
Confidence 568999999999999874 5778999999765 34445789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|+|.++++.. ...++|..+.+++
T Consensus 130 ~~sL~~~l~~~--~~~~~~~~~~~i~ 153 (373)
T 2qol_A 130 NGSLDSFLRKH--DAQFTVIQLVGML 153 (373)
T ss_dssp TCBHHHHHHTT--TTCSCHHHHHHHH
T ss_pred CCcHHHHHHhC--CCCCCHHHHHHHH
Confidence 99999999864 2347777665543
No 165
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.26 E-value=1.4e-13 Score=151.55 Aligned_cols=180 Identities=15% Similarity=0.119 Sum_probs=97.6
Q ss_pred CCceEEEEcCCCCCcccCc-cccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEee-----------CCCCCCC-Cc
Q 043706 87 MFRVISLILPNSQLLGSVT-KDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLS-----------NNAISGE-LP 153 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls-----------~N~l~~~-~p 153 (586)
+.+++.|+|++|.+.+... ..+..+++|+.|+|+++...+.++..+..+++|++|+|+ .|.+++. ++
T Consensus 292 ~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~ 371 (592)
T 3ogk_B 292 AAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLI 371 (592)
T ss_dssp GGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHH
T ss_pred cCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHH
Confidence 5689999999999766544 346777888888887332222333334556677777777 3455432 22
Q ss_pred cccCCCCCCcEEEccCCCCCCCCchhcCC-CCCCcEEecc----cccCCcCC--------CCCCCCCcEEecccC--CCC
Q 043706 154 DLIGQIPRLQLLNLSVNALAGKVPRNLTA-VKSLTVVSLR----SNYFSGSI--------PSGFTSVEVLDLSSN--LFN 218 (586)
Q Consensus 154 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~-l~~L~~L~L~----~N~l~g~~--------p~~l~~L~~L~Ls~N--~l~ 218 (586)
..+..+++|++|+++.|++++..+..++. +++|+.|+++ .|.+++.. ...+++|+.|+|++| .++
T Consensus 372 ~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~ 451 (592)
T 3ogk_B 372 ALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLT 451 (592)
T ss_dssp HHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCC
T ss_pred HHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCcc
Confidence 22344666777777666666655555544 6666666664 44555421 111355555555432 244
Q ss_pred CcCCcCCCC--CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCc
Q 043706 219 GSLPLDFGG--GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLT 266 (586)
Q Consensus 219 ~~~p~~~~~--~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~ 266 (586)
+..+..+.. ++|++|+|++|++++.....+...+++|+.|+|++|+++
T Consensus 452 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 452 DLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp HHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred HHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 333322221 445555555555554322233333555555555555554
No 166
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.25 E-value=9.6e-12 Score=126.37 Aligned_cols=99 Identities=19% Similarity=0.328 Sum_probs=82.9
Q ss_pred cceeecCCceEEEEEEeC----CCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA----DGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+|... .+..||||+++.. .....++|.+|++++.+++||||++++++|...+..++||||++
T Consensus 54 ~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 133 (325)
T 3kul_A 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYME 133 (325)
T ss_dssp EEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCT
T ss_pred eeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCC
Confidence 468999999999999983 3456999999765 34445779999999999999999999999998899999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|+|.++++... ..+++..+.+|+
T Consensus 134 ~~~L~~~l~~~~--~~~~~~~~~~i~ 157 (325)
T 3kul_A 134 NGSLDTFLRTHD--GQFTIMQLVGML 157 (325)
T ss_dssp TCBHHHHHHTTT--TCSCHHHHHHHH
T ss_pred CCcHHHHHHhcc--cCCCHHHHHHHH
Confidence 999999997642 347777666554
No 167
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.25 E-value=1.7e-11 Score=124.10 Aligned_cols=101 Identities=19% Similarity=0.232 Sum_probs=84.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCC--eEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE--EKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++.+++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 457999999999999985 69999999997543 344577899999999999999999999998765 77999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++........+++..+.+|+
T Consensus 94 ~~L~~~l~~~~~~~~~~~~~~~~i~ 118 (319)
T 4euu_A 94 GSLYTVLEEPSNAYGLPESEFLIVL 118 (319)
T ss_dssp CBHHHHHHSGGGTTCCCHHHHHHHH
T ss_pred CCHHHHHHHhccccCCCHHHHHHHH
Confidence 9999999876333447777666554
No 168
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=6.4e-14 Score=145.03 Aligned_cols=110 Identities=16% Similarity=0.110 Sum_probs=56.9
Q ss_pred CceEEEEcCCCCCcccCccccC-----CCCCCCEEEccCCCCCCCCCcccc-CCCCCcEEEeeCCCCCCCCcccc-----
Q 043706 88 FRVISLILPNSQLLGSVTKDLG-----LIQHLRHLDLSNNFFNGSLPLSIF-SATELQVLSLSNNAISGELPDLI----- 156 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~-----~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~----- 156 (586)
..++.|+|++|.++......+. ..++|+.|+|++|.|+......+. .+++|+.|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 3566677777766543332222 225666666666666533222222 24456666666666653333322
Q ss_pred CCCCCCcEEEccCCCCCCC----CchhcCCCCCCcEEecccccCC
Q 043706 157 GQIPRLQLLNLSVNALAGK----VPRNLTAVKSLTVVSLRSNYFS 197 (586)
Q Consensus 157 ~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~ 197 (586)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 2345566666666665431 2233345555666666655554
No 169
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.25 E-value=1.9e-11 Score=124.35 Aligned_cols=86 Identities=26% Similarity=0.316 Sum_probs=76.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++..++||||+++++++...+..++|||||++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 35799999999999998 58999999999654 3344567899999999999999999999999999999999999999
Q ss_pred CHHHHHhcc
Q 043706 561 CLASFSFTH 569 (586)
Q Consensus 561 sL~~~L~~~ 569 (586)
+|.+++...
T Consensus 100 ~L~~~l~~~ 108 (328)
T 3fe3_A 100 EVFDYLVAH 108 (328)
T ss_dssp BHHHHHHHH
T ss_pred cHHHHHHHc
Confidence 999999765
No 170
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.25 E-value=1.7e-13 Score=141.87 Aligned_cols=157 Identities=20% Similarity=0.239 Sum_probs=117.9
Q ss_pred CCCCCEEEccCCCCCCCCCccccC-----CCCCcEEEeeCCCCCCCCcccc-CCCCCCcEEEccCCCCCCCCchhc----
Q 043706 111 IQHLRHLDLSNNFFNGSLPLSIFS-----ATELQVLSLSNNAISGELPDLI-GQIPRLQLLNLSVNALAGKVPRNL---- 180 (586)
Q Consensus 111 l~~L~~L~Ls~N~l~g~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~l---- 180 (586)
+++|+.|+|++|.|+......+.. .++|++|+|++|.++......+ ..+.+|+.|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 467999999999998654444332 3799999999999975433333 346789999999999986555544
Q ss_pred -CCCCCCcEEecccccCCcC----CC---CCCCCCcEEecccCCCCCcC----CcCCCC-CcccEEEcccCcCCCcC---
Q 043706 181 -TAVKSLTVVSLRSNYFSGS----IP---SGFTSVEVLDLSSNLFNGSL----PLDFGG-GNLRYLNLSYNKISGSI--- 244 (586)
Q Consensus 181 -~~l~~L~~L~L~~N~l~g~----~p---~~l~~L~~L~Ls~N~l~~~~----p~~~~~-~~L~~L~ls~N~l~g~i--- 244 (586)
...++|+.|+|++|.|+.. ++ ...++|++|+|++|.|++.. +..+.. ++|+.|+|++|.|++.-
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3578999999999999752 22 22478999999999998643 333333 78999999999998532
Q ss_pred -cHHHHhcCCCCcEEEccCCCCccc
Q 043706 245 -SPEFAKRIPQNVTIDLSFNNLTGA 268 (586)
Q Consensus 245 -p~~~~~~l~~L~~L~Ls~N~l~g~ 268 (586)
...+.. .++|++|||++|.|+..
T Consensus 231 l~~~L~~-~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 231 LARAARE-HPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHH-CSSCCEEECTTSSCCHH
T ss_pred HHHHHHh-CCCCCEEeccCCCCCHH
Confidence 333333 68999999999999754
No 171
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.24 E-value=1.7e-11 Score=122.26 Aligned_cols=99 Identities=19% Similarity=0.201 Sum_probs=82.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
..+||+|+||.||+|.. .++..||||.+........+.|.+|+.++..++||||+++++++...+..++||||+++|+|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 45899999999999997 57899999999776555557899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhcc
Q 043706 563 ASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~ 582 (586)
.+++........+++..+..
T Consensus 107 ~~~l~~~~~~~~~~~~~~~~ 126 (295)
T 2clq_A 107 SALLRSKWGPLKDNEQTIGF 126 (295)
T ss_dssp HHHHHHTTCCCTTCHHHHHH
T ss_pred HHHHHhhccCCCccHHHHHH
Confidence 99998764444455655443
No 172
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.24 E-value=6.2e-12 Score=123.68 Aligned_cols=99 Identities=16% Similarity=0.235 Sum_probs=83.6
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeC--CeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWED--EEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. |..||||+++... ....++|.+|++++.+++||||++++++|... +..++||||+++
T Consensus 15 ~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (271)
T 3kmu_A 15 LTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY 93 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTT
T ss_pred HHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCC
Confidence 457999999999999985 8899999997553 34457799999999999999999999999887 678999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.++++.. ....+++..+.+|+
T Consensus 94 ~~L~~~l~~~-~~~~~~~~~~~~i~ 117 (271)
T 3kmu_A 94 GSLYNVLHEG-TNFVVDQSQAVKFA 117 (271)
T ss_dssp CBHHHHHHSC-SSCCCCHHHHHHHH
T ss_pred CcHHHHHhhc-ccCCCCHHHHHHHH
Confidence 9999999865 33357787766654
No 173
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.24 E-value=1.4e-11 Score=126.57 Aligned_cols=100 Identities=19% Similarity=0.284 Sum_probs=82.3
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch-----hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF-----ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~-----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|.. .+|+.||||.++.... ...++|.+|++++..++||||+++++++...+..++|||||
T Consensus 29 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 108 (351)
T 3c0i_A 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108 (351)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred eeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCC
Confidence 46899999999999997 4799999999964321 23577999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcc-CCCCCccHHhhccc
Q 043706 558 SNGCLASFSFTH-ASKFHLFFAIIHPF 583 (586)
Q Consensus 558 ~~GsL~~~L~~~-~~~~~l~w~~r~~~ 583 (586)
++|+|.+++... .....+++..+.++
T Consensus 109 ~g~~L~~~l~~~~~~~~~~~~~~~~~i 135 (351)
T 3c0i_A 109 DGADLCFEIVKRADAGFVYSEAVASHY 135 (351)
T ss_dssp SSCBHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CCCCHHHHHHHhcccCCCCCHHHHHHH
Confidence 999999988764 22334566555443
No 174
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.24 E-value=1.5e-11 Score=125.24 Aligned_cols=183 Identities=13% Similarity=0.087 Sum_probs=134.5
Q ss_pred CceEEEEcCCCCCc--------------------ccCccccCC--------CCCCCEEEccCCCCCCCCCccccCCCCCc
Q 043706 88 FRVISLILPNSQLL--------------------GSVTKDLGL--------IQHLRHLDLSNNFFNGSLPLSIFSATELQ 139 (586)
Q Consensus 88 ~~l~~L~L~~n~l~--------------------~~~~~~l~~--------l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 139 (586)
.+++.|||++|.+. ......|.+ +++|+.|+|.+ .++..-+.+|.+|++|+
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~ 127 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLK 127 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCC
T ss_pred ccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccc
Confidence 56788888888776 122345666 89999999998 88866677888999999
Q ss_pred EEEeeCCCCCCCCccccCCCCCCcEEEccCCCC-------C-------------------CCCchhc-------------
Q 043706 140 VLSLSNNAISGELPDLIGQIPRLQLLNLSVNAL-------A-------------------GKVPRNL------------- 180 (586)
Q Consensus 140 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l-------~-------------------~~~p~~l------------- 180 (586)
.|+|++|.+....+..|..+.++..+.++.+.. . +.++..+
T Consensus 128 ~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l 207 (329)
T 3sb4_A 128 ICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFL 207 (329)
T ss_dssp EEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEE
T ss_pred eEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccceE
Confidence 999999988866777788877777776655211 0 0000000
Q ss_pred ---------------CCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCCcCCCC-Cccc-EEEcccCcC
Q 043706 181 ---------------TAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPLDFGG-GNLR-YLNLSYNKI 240 (586)
Q Consensus 181 ---------------~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~~~~~-~~L~-~L~ls~N~l 240 (586)
..+++|+.|+|++|+++...+..| .+|+.|+|.+| ++...+..|.. .+|+ .|++.+ .+
T Consensus 208 ~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l 285 (329)
T 3sb4_A 208 TIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SV 285 (329)
T ss_dssp EEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TC
T ss_pred EEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cc
Confidence 027899999999999885544444 78999999998 77666777777 7799 999998 67
Q ss_pred CCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCc
Q 043706 241 SGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALP 274 (586)
Q Consensus 241 ~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 274 (586)
+ .|+...+.++++|+.|+++.|+++...+..+.
T Consensus 286 ~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~ 318 (329)
T 3sb4_A 286 T-AIEFGAFMGCDNLRYVLATGDKITTLGDELFG 318 (329)
T ss_dssp C-EECTTTTTTCTTEEEEEECSSCCCEECTTTTC
T ss_pred e-EEchhhhhCCccCCEEEeCCCccCccchhhhc
Confidence 6 66666666699999999999999877665553
No 175
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.24 E-value=7.6e-12 Score=134.73 Aligned_cols=99 Identities=19% Similarity=0.313 Sum_probs=84.3
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|+.. ++..||||.++.... ..++|.+|+++|.+++|||||+++++|...+..++|||||++|+|
T Consensus 225 ~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 467999999999999985 589999999976543 347899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhcccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.++|+.. ....+++..+.+|+
T Consensus 304 ~~~l~~~-~~~~~~~~~~~~i~ 324 (495)
T 1opk_A 304 LDYLREC-NRQEVSAVVLLYMA 324 (495)
T ss_dssp HHHHHHS-CTTTSCHHHHHHHH
T ss_pred HHHHHhc-CcCCCCHHHHHHHH
Confidence 9999864 23456777665543
No 176
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.23 E-value=5.5e-13 Score=146.83 Aligned_cols=56 Identities=20% Similarity=0.129 Sum_probs=25.1
Q ss_pred CCCcEEecccCCCCCcCCcC-CCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEcc
Q 043706 205 TSVEVLDLSSNLFNGSLPLD-FGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLS 261 (586)
Q Consensus 205 ~~L~~L~Ls~N~l~~~~p~~-~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls 261 (586)
++|++|+|++|.+++..... +.. ++|+.|+++ |.+.......+...+++|+.|+|+
T Consensus 293 ~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 293 AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEee
Confidence 46666666666655433211 122 455555555 222222222222224555555555
No 177
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.23 E-value=1.5e-11 Score=121.03 Aligned_cols=98 Identities=22% Similarity=0.312 Sum_probs=83.4
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
...||+|+||.||+|...++..||+|.++..... .+++.+|++++.+++||||+++++++...+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 13 LKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeccCCCceEEEEEecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 3579999999999999988889999999765433 367999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccHHhhcccc
Q 043706 564 SFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++... ...+++..+.+|+
T Consensus 92 ~~l~~~--~~~~~~~~~~~i~ 110 (268)
T 3sxs_A 92 NYLRSH--GKGLEPSQLLEMC 110 (268)
T ss_dssp HHHHHH--GGGCCHHHHHHHH
T ss_pred HHHHHc--CCCCCHHHHHHHH
Confidence 999764 2246666665553
No 178
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.23 E-value=1.1e-11 Score=123.88 Aligned_cols=99 Identities=22% Similarity=0.366 Sum_probs=82.9
Q ss_pred cceeecCCceEEEEEEe-----CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeC--CeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL-----ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWED--EEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ey 556 (586)
.+.||+|+||.||+|++ .+|+.||||++........++|.+|++++.+++||||++++++|... ...++||||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 94 (295)
T 3ugc_A 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 94 (295)
T ss_dssp EEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEEC
T ss_pred hheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEe
Confidence 45799999999999985 36899999999877666667899999999999999999999999654 458999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++|+|.+++... ...+++..+.+|+
T Consensus 95 ~~~~~L~~~l~~~--~~~~~~~~~~~~~ 120 (295)
T 3ugc_A 95 LPYGSLRDYLQKH--KERIDHIKLLQYT 120 (295)
T ss_dssp CTTCBHHHHHHHC--GGGCCHHHHHHHH
T ss_pred CCCCCHHHHHHhc--ccccCHHHHHHHH
Confidence 9999999999865 2246777665553
No 179
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.23 E-value=6.8e-12 Score=130.27 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=82.5
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|... +|+.||||.++... ....++|.+|++++.+++|||||+++++|...+..++|||||++|+
T Consensus 119 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~ 198 (377)
T 3cbl_A 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198 (377)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred eeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCC
Confidence 467999999999999985 79999999997542 3334579999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.++++.. ...+++..+.++
T Consensus 199 L~~~l~~~--~~~~~~~~~~~~ 218 (377)
T 3cbl_A 199 FLTFLRTE--GARLRVKTLLQM 218 (377)
T ss_dssp HHHHHHHH--GGGCCHHHHHHH
T ss_pred HHHHHHhc--CCCCCHHHHHHH
Confidence 99999864 223666655544
No 180
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.23 E-value=1.9e-11 Score=129.99 Aligned_cols=97 Identities=19% Similarity=0.286 Sum_probs=81.4
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCC-eEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE-EKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|... |+.||||.++... ..++|.+|++++.+++|||||+++++|...+ ..++|||||++|+|
T Consensus 198 ~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 198 LQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 468999999999999985 7899999997654 3467999999999999999999999998765 78999999999999
Q ss_pred HHHHhccCCCCCccHHhhcccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.++|+.. +...+++..+.+|+
T Consensus 275 ~~~l~~~-~~~~~~~~~~~~~~ 295 (450)
T 1k9a_A 275 VDYLRSR-GRSVLGGDCLLKFS 295 (450)
T ss_dssp HHHHHHH-CTTTCCHHHHHHHH
T ss_pred HHHHHhc-CCCCCCHHHHHHHH
Confidence 9999875 23345666655543
No 181
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.23 E-value=2.9e-11 Score=122.84 Aligned_cols=98 Identities=22% Similarity=0.263 Sum_probs=82.7
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch------hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||++... +|..||+|.++.... ...+++.+|+.++.+++||||+++++++...+..++||||
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 95 (326)
T 2y0a_A 16 GEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILEL 95 (326)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEc
Confidence 467999999999999984 799999999965422 1357799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++|+|.+++... ..+++..+.+++
T Consensus 96 ~~~~~L~~~l~~~---~~~~~~~~~~i~ 120 (326)
T 2y0a_A 96 VAGGELFDFLAEK---ESLTEEEATEFL 120 (326)
T ss_dssp CCSCBHHHHHTTS---SCCBHHHHHHHH
T ss_pred CCCCCHHHHHHhc---CCcCHHHHHHHH
Confidence 9999999999754 346666655543
No 182
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.22 E-value=1.6e-11 Score=127.03 Aligned_cols=86 Identities=24% Similarity=0.313 Sum_probs=75.4
Q ss_pred cceeecCCceEEEEEEe--------CCCcEEEEEEeccc-chhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEE
Q 043706 484 AYILCTSSSSIVYKAVL--------ADGTTLAVRRIGET-CFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLI 553 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~--------~~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 553 (586)
.+.||+|+||.||+|+. .++..||||+++.. .....++|.+|++++.++ +||||++++++|...+..++|
T Consensus 86 ~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 165 (370)
T 2psq_A 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 165 (370)
T ss_dssp EEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEE
Confidence 45799999999999985 24568999999765 334457799999999999 899999999999999999999
Q ss_pred EeccCCCCHHHHHhcc
Q 043706 554 HDYVSNGCLASFSFTH 569 (586)
Q Consensus 554 ~ey~~~GsL~~~L~~~ 569 (586)
|||+++|+|.++|...
T Consensus 166 ~e~~~~g~L~~~l~~~ 181 (370)
T 2psq_A 166 VEYASKGNLREYLRAR 181 (370)
T ss_dssp EECCTTCBHHHHHHHT
T ss_pred EEcCCCCCHHHHHHhh
Confidence 9999999999999865
No 183
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.22 E-value=2.4e-11 Score=125.30 Aligned_cols=97 Identities=24% Similarity=0.265 Sum_probs=82.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchh------hHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFE------RLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~------~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|+.. +|..||+|.++..... ..+.+.+|+.++..++||||+++++++...+..++||||
T Consensus 17 ~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~ 96 (361)
T 2yab_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILEL 96 (361)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEc
Confidence 457999999999999984 7999999999754321 347799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+++|+|.+++... ..+++..+.++
T Consensus 97 ~~gg~L~~~l~~~---~~l~~~~~~~i 120 (361)
T 2yab_A 97 VSGGELFDFLAQK---ESLSEEEATSF 120 (361)
T ss_dssp CCSCBHHHHHTTC---SCCBHHHHHHH
T ss_pred CCCCcHHHHHHhc---CCCCHHHHHHH
Confidence 9999999999754 34666655544
No 184
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.22 E-value=2.8e-11 Score=119.68 Aligned_cols=97 Identities=15% Similarity=0.184 Sum_probs=83.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|... ++..+|+|++........+.|.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (277)
T 3f3z_A 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL 93 (277)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred eeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence 457999999999999985 6889999999776555567899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++... ..+++..+.+|
T Consensus 94 ~~~~~~~---~~~~~~~~~~i 111 (277)
T 3f3z_A 94 FERVVHK---RVFRESDAARI 111 (277)
T ss_dssp HHHHHHH---CSCCHHHHHHH
T ss_pred HHHHHHc---CCCCHHHHHHH
Confidence 9998765 23566655544
No 185
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.22 E-value=2e-11 Score=121.14 Aligned_cols=98 Identities=19% Similarity=0.291 Sum_probs=80.5
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.+.||+|+||.||+|...++..||+|+++..... .++|.+|++++.+++|+||++++++|...+..++||||+++|+|.
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (283)
T 3gen_A 29 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 107 (283)
T ss_dssp EEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHH
T ss_pred HhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHH
Confidence 4579999999999999988889999999865433 367999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccHHhhcccc
Q 043706 564 SFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++... ...+++..+.+|+
T Consensus 108 ~~l~~~--~~~~~~~~~~~i~ 126 (283)
T 3gen_A 108 NYLREM--RHRFQTQQLLEMC 126 (283)
T ss_dssp HHHHCG--GGCCCHHHHHHHH
T ss_pred HHHHHh--ccCCCHHHHHHHH
Confidence 999863 1236666665543
No 186
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.22 E-value=1.9e-11 Score=125.20 Aligned_cols=97 Identities=14% Similarity=0.233 Sum_probs=80.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch-hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF-ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 45799999999999997 5799999999965432 233568999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.+++... ..+++..+.++
T Consensus 95 L~~~l~~~---~~l~~~~~~~i 113 (347)
T 3zgw_A 95 LFDYIISQ---DRLSEEETRVV 113 (347)
T ss_dssp HHHHHHHH---SSCCHHHHHHH
T ss_pred HHHHHHHc---CCCCHHHHHHH
Confidence 99999765 23555554443
No 187
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.22 E-value=3.9e-11 Score=121.65 Aligned_cols=97 Identities=18% Similarity=0.138 Sum_probs=81.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|+.. +|..+|+|.+..... ..+.+.+|++++..++||||+++++++...+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcc-cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 357999999999999984 789999999975433 346689999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++... ...+++..+.++
T Consensus 89 ~~~l~~~--~~~~~~~~~~~i 107 (321)
T 1tki_A 89 FERINTS--AFELNEREIVSY 107 (321)
T ss_dssp HHHHTSS--SCCCCHHHHHHH
T ss_pred HHHHHhc--CCCCCHHHHHHH
Confidence 9999754 234666655544
No 188
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.22 E-value=2e-11 Score=121.42 Aligned_cols=98 Identities=17% Similarity=0.219 Sum_probs=82.8
Q ss_pred cceeecCCceEEEEEEeC-CC-------cEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVLA-DG-------TTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g-------~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 555 (586)
.+.||+|+||.||+|+.. +| ..||+|.+........++|.+|++++.+++||||+++++++...+..++|||
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 92 (289)
T 4fvq_A 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92 (289)
T ss_dssp EEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEE
T ss_pred eeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEE
Confidence 457999999999999874 34 5799999987766666889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+++|+|.+++... ...+++..+.+|
T Consensus 93 ~~~~~~L~~~l~~~--~~~~~~~~~~~i 118 (289)
T 4fvq_A 93 FVKFGSLDTYLKKN--KNCINILWKLEV 118 (289)
T ss_dssp CCTTCBHHHHHHHT--GGGCCHHHHHHH
T ss_pred CCCCCCHHHHHHhC--CCCCCHHHHHHH
Confidence 99999999999865 223566655544
No 189
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.21 E-value=1.1e-11 Score=132.07 Aligned_cols=97 Identities=19% Similarity=0.267 Sum_probs=81.1
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.+.||+|+||.||+|.+.++..||||.++.... ..++|.+|++++.+++|||||++++++. .+..++|||||++|+|.
T Consensus 193 ~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 457999999999999998889999999986543 3578999999999999999999999986 66789999999999999
Q ss_pred HHHhccCCCCCccHHhhccc
Q 043706 564 SFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~ 583 (586)
++|+.. ....+++..+.+|
T Consensus 271 ~~l~~~-~~~~~~~~~~~~~ 289 (454)
T 1qcf_A 271 DFLKSD-EGSKQPLPKLIDF 289 (454)
T ss_dssp HHHHSH-HHHTCCHHHHHHH
T ss_pred HHHHhc-cCCCCCHHHHHHH
Confidence 999854 1123566655544
No 190
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.21 E-value=3.5e-11 Score=121.33 Aligned_cols=96 Identities=16% Similarity=0.151 Sum_probs=81.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.++||+|+||.||+|.. .+|+.||||++........+.+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 35799999999999997 47999999999766555567899999999985 79999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhcc
Q 043706 562 LASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~ 582 (586)
|.+++... ..+++..+.+
T Consensus 98 L~~~l~~~---~~~~~~~~~~ 115 (316)
T 2ac3_A 98 ILSHIHKR---RHFNELEASV 115 (316)
T ss_dssp HHHHHHHH---SSCCHHHHHH
T ss_pred HHHHHhcc---CCCCHHHHHH
Confidence 99999865 2355554443
No 191
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.21 E-value=3.1e-11 Score=120.69 Aligned_cols=98 Identities=24% Similarity=0.220 Sum_probs=82.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc---chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET---CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+++. .+|..||+|.+... .....+.|.+|++++.+++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 35799999999999997 47899999998543 233456799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++... ..+++..+.+|+
T Consensus 96 ~~L~~~l~~~---~~~~~~~~~~~~ 117 (294)
T 4eqm_A 96 PTLSEYIESH---GPLSVDTAINFT 117 (294)
T ss_dssp CBHHHHHHHH---CSCCHHHHHHHH
T ss_pred CCHHHHHHhc---CCCCHHHHHHHH
Confidence 9999999765 246676665553
No 192
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.21 E-value=3.3e-11 Score=122.38 Aligned_cols=95 Identities=21% Similarity=0.226 Sum_probs=81.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccC-CCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLK-HPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
++.||+|+||.||+|+.. +|+.||||++.... ...+.+|++++..+. ||||+++++++...+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRM---EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGG---HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhh---hhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 468999999999999984 79999999996532 356889999999997 9999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.+++... ..+++..+.+|+
T Consensus 93 L~~~l~~~---~~~~~~~~~~i~ 112 (325)
T 3kn6_A 93 LFERIKKK---KHFSETEASYIM 112 (325)
T ss_dssp HHHHHHHC---SCCCHHHHHHHH
T ss_pred HHHHHHhc---CCCCHHHHHHHH
Confidence 99999865 346666655543
No 193
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.21 E-value=3.6e-11 Score=124.06 Aligned_cols=97 Identities=24% Similarity=0.236 Sum_probs=81.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++.+++|||||++++++...+..++||||+++|
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg 113 (362)
T 2bdw_A 34 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113 (362)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 568999999999999984 79999999996542 344567999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++... ..+++..+.++
T Consensus 114 ~L~~~l~~~---~~~~~~~~~~~ 133 (362)
T 2bdw_A 114 ELFEDIVAR---EFYSEADASHC 133 (362)
T ss_dssp BHHHHHTTC---SCCCHHHHHHH
T ss_pred CHHHHHHHc---CCCCHHHHHHH
Confidence 999999754 23555554443
No 194
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.21 E-value=3.1e-11 Score=125.62 Aligned_cols=99 Identities=17% Similarity=0.242 Sum_probs=84.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|... +|+.+|+|.+..........+.+|++++..++||||+++++++...+..++||||+++|+|
T Consensus 56 ~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L 135 (387)
T 1kob_A 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135 (387)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred EEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence 457999999999999984 7999999999876555557899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhcccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.+++.... ..+++..+.+++
T Consensus 136 ~~~l~~~~--~~l~~~~~~~i~ 155 (387)
T 1kob_A 136 FDRIAAED--YKMSEAEVINYM 155 (387)
T ss_dssp HHHTTCTT--CCBCHHHHHHHH
T ss_pred HHHHHhhc--CCCCHHHHHHHH
Confidence 99987542 246666555443
No 195
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.20 E-value=2.8e-11 Score=132.21 Aligned_cols=86 Identities=14% Similarity=0.116 Sum_probs=71.3
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch---hhHHHHH---HHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF---ERLKDLE---SQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~---~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
..+||+|+||+||+|+. .+|+.||||+++.... .....+. .++.++..++|||||++++++.+.+..||||||
T Consensus 194 ~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy 273 (689)
T 3v5w_A 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDL 273 (689)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEec
Confidence 46899999999999998 4799999999965421 1222233 346677788999999999999999999999999
Q ss_pred cCCCCHHHHHhcc
Q 043706 557 VSNGCLASFSFTH 569 (586)
Q Consensus 557 ~~~GsL~~~L~~~ 569 (586)
|++|+|.++|...
T Consensus 274 ~~GGdL~~~l~~~ 286 (689)
T 3v5w_A 274 MNGGDLHYHLSQH 286 (689)
T ss_dssp CCSCBHHHHHHHH
T ss_pred CCCCcHHHHHHhc
Confidence 9999999999865
No 196
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.20 E-value=2e-11 Score=128.92 Aligned_cols=98 Identities=11% Similarity=0.090 Sum_probs=80.7
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.++||+|+||.||+|+.. +|+.||+|+++.... ...+.+.+|+.++..++||||++++++|...+..++|||||++
T Consensus 79 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~g 158 (437)
T 4aw2_A 79 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVG 158 (437)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCC
Confidence 468999999999999985 689999999975422 1223489999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.++|+... ..+++..+..|
T Consensus 159 g~L~~~l~~~~--~~l~e~~~~~~ 180 (437)
T 4aw2_A 159 GDLLTLLSKFE--DRLPEEMARFY 180 (437)
T ss_dssp CBHHHHHHTTT--TCCCHHHHHHH
T ss_pred CcHHHHHHHcc--CCCCHHHHHHH
Confidence 99999998642 23566555444
No 197
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.20 E-value=1.4e-11 Score=131.21 Aligned_cols=98 Identities=18% Similarity=0.251 Sum_probs=81.4
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.+.||+|+||.||+|...++..||||.++.... ..++|.+|++++.+++||||++++++|.. +..++|||||++|+|.
T Consensus 189 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 457999999999999998788899999986543 34789999999999999999999999865 6789999999999999
Q ss_pred HHHhccCCCCCccHHhhcccc
Q 043706 564 SFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+.. ....+++..+.+|+
T Consensus 267 ~~l~~~-~~~~~~~~~~~~i~ 286 (452)
T 1fmk_A 267 DFLKGE-TGKYLRLPQLVDMA 286 (452)
T ss_dssp HHHSHH-HHTTCCHHHHHHHH
T ss_pred HHHHhc-CCCCCCHHHHHHHH
Confidence 999754 12346666665543
No 198
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.20 E-value=3e-11 Score=126.26 Aligned_cols=101 Identities=19% Similarity=0.232 Sum_probs=83.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCC--eEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE--EKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|++++.+++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 457999999999999985 69999999997543 334577899999999999999999999998765 77999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++........+++..+.+|+
T Consensus 94 g~L~~~l~~~~~~~~l~~~~~~~i~ 118 (396)
T 4eut_A 94 GSLYTVLEEPSNAYGLPESEFLIVL 118 (396)
T ss_dssp EEHHHHTTSGGGTTCCCHHHHHHHH
T ss_pred CCHHHHHHhhhcccCCCHHHHHHHH
Confidence 9999999875333347777666554
No 199
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.20 E-value=3.1e-11 Score=123.26 Aligned_cols=86 Identities=22% Similarity=0.294 Sum_probs=75.9
Q ss_pred cceeecCCceEEEEEEeC------CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA------DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~------~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|+.. ++..||||.++... ....++|.+|++++.+++||||++++++|...+..++||||
T Consensus 52 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 131 (343)
T 1luf_A 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEY 131 (343)
T ss_dssp EEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEec
Confidence 467999999999999974 34899999997653 34457799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcc
Q 043706 557 VSNGCLASFSFTH 569 (586)
Q Consensus 557 ~~~GsL~~~L~~~ 569 (586)
+++|+|.+++...
T Consensus 132 ~~~~~L~~~l~~~ 144 (343)
T 1luf_A 132 MAYGDLNEFLRSM 144 (343)
T ss_dssp CTTCBHHHHHHHT
T ss_pred CCCCcHHHHHHHh
Confidence 9999999999864
No 200
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.20 E-value=5.5e-11 Score=123.84 Aligned_cols=100 Identities=20% Similarity=0.222 Sum_probs=83.4
Q ss_pred cceeecC--CceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTS--SSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g--~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+| +||.||+|+.. +|+.||||+++... ....+.+.+|++++.+++|||||++++++...+..++|||||+
T Consensus 30 ~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 109 (389)
T 3gni_B 30 LTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109 (389)
T ss_dssp EEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccC
Confidence 4579999 99999999985 79999999997543 3344678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|+|.+++.... ...+++..+.+|+
T Consensus 110 ~~~L~~~l~~~~-~~~~~~~~~~~~~ 134 (389)
T 3gni_B 110 YGSAKDLICTHF-MDGMNELAIAYIL 134 (389)
T ss_dssp TCBHHHHHHHTC-TTCCCHHHHHHHH
T ss_pred CCCHHHHHhhhc-ccCCCHHHHHHHH
Confidence 999999998652 2236666555443
No 201
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.19 E-value=3.2e-11 Score=118.40 Aligned_cols=98 Identities=19% Similarity=0.319 Sum_probs=83.5
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.+.||+|+||.||++...++..||+|.+...... .+++.+|++++.+++||||+++++++...+..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 13 VQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 4579999999999999988899999999765433 367999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCccHHhhcccc
Q 043706 564 SFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++.... ..+++..+.+|+
T Consensus 92 ~~~~~~~--~~~~~~~~~~~~ 110 (267)
T 3t9t_A 92 DYLRTQR--GLFAAETLLGMC 110 (267)
T ss_dssp HHHHHTT--TCCCHHHHHHHH
T ss_pred HHHhhCc--ccCCHHHHHHHH
Confidence 9998652 246666665543
No 202
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.19 E-value=3.3e-11 Score=119.82 Aligned_cols=100 Identities=14% Similarity=0.186 Sum_probs=83.4
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||++.. .+|..+|+|++.... ....+.+.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~ 106 (285)
T 3is5_A 27 KRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGE 106 (285)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCB
T ss_pred cceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCc
Confidence 46899999999999998 478999999997553 3345789999999999999999999999999999999999999999
Q ss_pred HHHHHhcc-CCCCCccHHhhccc
Q 043706 562 LASFSFTH-ASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~-~~~~~l~w~~r~~~ 583 (586)
|.+++... .....+++..+.++
T Consensus 107 L~~~l~~~~~~~~~~~~~~~~~i 129 (285)
T 3is5_A 107 LLERIVSAQARGKALSEGYVAEL 129 (285)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHhhhhcccCCCHHHHHHH
Confidence 99999754 12244666655544
No 203
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.19 E-value=2.7e-11 Score=122.81 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=78.5
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCC----eEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE----EKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. |+.||||++...... ..++..|+.++.+++|||||++++++.... ..++||||+++
T Consensus 29 ~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 29 LEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hheecccCceEEEEEEEC-CCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 457999999999999885 899999999765433 355677999999999999999999998754 46999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.++++.. .++|..+.+|+
T Consensus 107 g~L~~~l~~~----~~~~~~~~~i~ 127 (322)
T 3soc_A 107 GSLSDFLKAN----VVSWNELCHIA 127 (322)
T ss_dssp CBHHHHHHHC----CBCHHHHHHHH
T ss_pred CCHHHHHHhc----CCCHHHHHHHH
Confidence 9999999764 36777665543
No 204
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.19 E-value=3.9e-11 Score=121.12 Aligned_cols=101 Identities=18% Similarity=0.097 Sum_probs=82.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEe----CCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWE----DEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+++. .+|+.||||++........+.+.+|++++.+++||||+++++++.. ....++|+||++
T Consensus 34 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~ 113 (317)
T 2buj_A 34 IQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113 (317)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCT
T ss_pred EEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCC
Confidence 46799999999999997 5799999999977666666789999999999999999999999973 347889999999
Q ss_pred CCCHHHHHhcc-CCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTH-ASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~-~~~~~l~w~~r~~~~ 584 (586)
+|+|.+++... .....+++..+.+|+
T Consensus 114 ~~~L~~~l~~~~~~~~~~~~~~~~~i~ 140 (317)
T 2buj_A 114 RGTLWNEIERLKDKGNFLTEDQILWLL 140 (317)
T ss_dssp TCBHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred CCcHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 99999999863 233567777766654
No 205
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.18 E-value=4.1e-11 Score=123.56 Aligned_cols=96 Identities=15% Similarity=0.135 Sum_probs=81.0
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+++.. +|+.||||++....... +.+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID-ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC-HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc-HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 357999999999999985 79999999997654332 6689999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++... ..+++..+.+|
T Consensus 104 ~~~l~~~---~~~~~~~~~~i 121 (361)
T 3uc3_A 104 YERICNA---GRFSEDEARFF 121 (361)
T ss_dssp HHHHHHH---SSCCHHHHHHH
T ss_pred HHHHHhc---CCCCHHHHHHH
Confidence 9999764 23555555444
No 206
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.18 E-value=4.7e-11 Score=121.88 Aligned_cols=86 Identities=13% Similarity=0.174 Sum_probs=76.2
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+++.. +|+.||+|+++... ....+.+.+|++++..++||||+++++++...+..++||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 457999999999999984 79999999997542 23456789999999999999999999999999999999999999
Q ss_pred CCHHHHHhcc
Q 043706 560 GCLASFSFTH 569 (586)
Q Consensus 560 GsL~~~L~~~ 569 (586)
|+|.+++...
T Consensus 90 g~L~~~l~~~ 99 (337)
T 1o6l_A 90 GELFFHLSRE 99 (337)
T ss_dssp CBHHHHHHHH
T ss_pred CcHHHHHHhc
Confidence 9999999764
No 207
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.18 E-value=1.7e-11 Score=133.33 Aligned_cols=98 Identities=18% Similarity=0.251 Sum_probs=81.5
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.+.||+|+||.||+|.+.++..||||+++.... ..++|.+|+++|.+++|+|||+++++|.. +..++|||||++|+|.
T Consensus 272 ~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred heecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 457999999999999998788899999986543 34789999999999999999999999865 6789999999999999
Q ss_pred HHHhccCCCCCccHHhhcccc
Q 043706 564 SFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+.. ....+++..+.+|+
T Consensus 350 ~~l~~~-~~~~l~~~~~~~i~ 369 (535)
T 2h8h_A 350 DFLKGE-TGKYLRLPQLVDMA 369 (535)
T ss_dssp HHHSHH-HHTTCCHHHHHHHH
T ss_pred HHHhhc-CCCCCCHHHHHHHH
Confidence 999754 12346666665543
No 208
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.17 E-value=2.7e-11 Score=125.23 Aligned_cols=101 Identities=18% Similarity=0.197 Sum_probs=83.4
Q ss_pred cceeecCCceEEEEEEe------CCCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL------ADGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~------~~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|+. .++..||||+++.. ......+|.+|+.++.+++|||||++++++...+..++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 45799999999999985 25678999999754 344456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhccC----CCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHA----SKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~----~~~~l~w~~r~~~~ 584 (586)
+++|+|.+++.... ....++|..+.+|+
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~ 187 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHH
Confidence 99999999998752 12457777666553
No 209
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.17 E-value=6.2e-11 Score=121.88 Aligned_cols=82 Identities=10% Similarity=0.177 Sum_probs=71.5
Q ss_pred cceeecCCceEEEEEEe----CCCcEEEEEEecccchhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVL----ADGTTLAVRRIGETCFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~----~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||+||+|+. ..++.||+|++..... ..++.+|+++|..+ .|||||++++++...+..++|||||+
T Consensus 26 ~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~ 103 (361)
T 4f9c_A 26 EDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLE 103 (361)
T ss_dssp EEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCC
T ss_pred EEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCC
Confidence 45799999999999975 2478999999965432 35688999999998 69999999999999999999999999
Q ss_pred CCCHHHHHh
Q 043706 559 NGCLASFSF 567 (586)
Q Consensus 559 ~GsL~~~L~ 567 (586)
+|+|.+++.
T Consensus 104 g~~L~~~~~ 112 (361)
T 4f9c_A 104 HESFLDILN 112 (361)
T ss_dssp CCCHHHHHT
T ss_pred cccHHHHHc
Confidence 999999985
No 210
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.17 E-value=5.6e-11 Score=117.81 Aligned_cols=101 Identities=21% Similarity=0.191 Sum_probs=83.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEeccc--chhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGET--CFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. +|+.||+|++... ......++.+|+..+.++ +||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 95 (289)
T 1x8b_A 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNG 95 (289)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred hhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCC
Confidence 457999999999999985 7999999999754 233456789999999999 999999999999999999999999999
Q ss_pred CCHHHHHhccC-CCCCccHHhhcccc
Q 043706 560 GCLASFSFTHA-SKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~-~~~~l~w~~r~~~~ 584 (586)
|+|.+++.... ....+++..+.+|+
T Consensus 96 ~~L~~~l~~~~~~~~~~~~~~~~~i~ 121 (289)
T 1x8b_A 96 GSLADAISENYRIMSYFKEAELKDLL 121 (289)
T ss_dssp CBHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred CcHHHHHHhhcccccCCCHHHHHHHH
Confidence 99999998641 12346676665543
No 211
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.17 E-value=6.5e-11 Score=118.79 Aligned_cols=97 Identities=22% Similarity=0.196 Sum_probs=78.9
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+++.. +|+.||+|.++.......+.+.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (304)
T 2jam_A 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93 (304)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccH
Confidence 467999999999999984 7999999999866544456799999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++... ..+++..+.++
T Consensus 94 ~~~l~~~---~~~~~~~~~~~ 111 (304)
T 2jam_A 94 FDRILER---GVYTEKDASLV 111 (304)
T ss_dssp HHHHHHH---SCCCHHHHHHH
T ss_pred HHHHHHc---CCCCHHHHHHH
Confidence 9999764 23555544433
No 212
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.17 E-value=4.1e-11 Score=123.00 Aligned_cols=95 Identities=20% Similarity=0.225 Sum_probs=74.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++.+++||||++++++|...+..++||||+++|+|
T Consensus 58 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 135 (349)
T 2w4o_A 58 ESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL 135 (349)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCH
Confidence 457999999999999985 68899999997543 235688999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++... ..+++..+.++
T Consensus 136 ~~~l~~~---~~~~~~~~~~i 153 (349)
T 2w4o_A 136 FDRIVEK---GYYSERDAADA 153 (349)
T ss_dssp HHHHTTC---SSCCHHHHHHH
T ss_pred HHHHHhc---CCCCHHHHHHH
Confidence 9999764 23666655544
No 213
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.17 E-value=7.9e-11 Score=117.32 Aligned_cols=84 Identities=11% Similarity=0.180 Sum_probs=75.2
Q ss_pred ceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 485 YILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
+.||+|+||.||+|+.. +|+.||||.++... ....+.|.+|++.+.+++|+||+++++++...+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~ 116 (286)
T 3uqc_A 37 IFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGG 116 (286)
T ss_dssp EEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEE
T ss_pred EEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCC
Confidence 57999999999999985 69999999997653 233477999999999999999999999999999999999999999
Q ss_pred CHHHHHhc
Q 043706 561 CLASFSFT 568 (586)
Q Consensus 561 sL~~~L~~ 568 (586)
+|.+++..
T Consensus 117 ~L~~~l~~ 124 (286)
T 3uqc_A 117 SLQEVADT 124 (286)
T ss_dssp EHHHHHTT
T ss_pred CHHHHHhc
Confidence 99999954
No 214
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.17 E-value=8.4e-11 Score=116.49 Aligned_cols=98 Identities=22% Similarity=0.290 Sum_probs=82.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch------hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||++... +|+.||+|.++.... ...++|.+|++++.+++||||+++++++...+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 89 (283)
T 3bhy_A 10 GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILEL 89 (283)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred HHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEee
Confidence 457999999999999985 799999999965422 1357899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++|+|.+++... ..+++..+.+|+
T Consensus 90 ~~~~~L~~~l~~~---~~~~~~~~~~~~ 114 (283)
T 3bhy_A 90 VSGGELFDFLAEK---ESLTEDEATQFL 114 (283)
T ss_dssp CCSCBHHHHHHHH---SSCCHHHHHHHH
T ss_pred cCCCcHHHHHHhc---CCCCHHHHHHHH
Confidence 9999999999764 346666655543
No 215
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.17 E-value=2.7e-11 Score=122.87 Aligned_cols=98 Identities=19% Similarity=0.141 Sum_probs=79.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch-hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF-ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.++..++||||+++++++...+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 357999999999999985 799999999965432 233668999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.+++... ..+++..+.+|+
T Consensus 92 L~~~l~~~---~~~~~~~~~~i~ 111 (323)
T 3tki_A 92 LFDRIEPD---IGMPEPDAQRFF 111 (323)
T ss_dssp GGGGSBTT---TBCCHHHHHHHH
T ss_pred HHHHHhhc---CCCCHHHHHHHH
Confidence 99998654 336666655543
No 216
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.17 E-value=2.8e-11 Score=124.43 Aligned_cols=86 Identities=22% Similarity=0.263 Sum_probs=74.0
Q ss_pred cceeecCCceEEEEEEe------CCCcEEEEEEecccc-hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCC-eEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL------ADGTTLAVRRIGETC-FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDE-EKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~-~~~lv~ 554 (586)
.+.||+|+||.||+|+. .+++.||||+++... ....+.|.+|++++.++ +|||||+++++|...+ ..++||
T Consensus 27 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~ 106 (359)
T 3vhe_A 27 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 106 (359)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEE
T ss_pred ceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEE
Confidence 46799999999999973 356899999997653 34456799999999999 8999999999998865 489999
Q ss_pred eccCCCCHHHHHhcc
Q 043706 555 DYVSNGCLASFSFTH 569 (586)
Q Consensus 555 ey~~~GsL~~~L~~~ 569 (586)
||+++|+|.++++..
T Consensus 107 e~~~~g~L~~~l~~~ 121 (359)
T 3vhe_A 107 EFCKFGNLSTYLRSK 121 (359)
T ss_dssp ECCTTEEHHHHHHTT
T ss_pred EecCCCcHHHHHHhc
Confidence 999999999999875
No 217
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.17 E-value=6.6e-11 Score=120.11 Aligned_cols=99 Identities=19% Similarity=0.322 Sum_probs=83.5
Q ss_pred cceeecCCceEEEEEEe-----CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEe--CCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL-----ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWE--DEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey 556 (586)
.+.||+|+||.||+|++ .+|..||||++........+.|.+|++++.+++|+||+++++++.. .+..++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 107 (327)
T 3lxl_A 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEY 107 (327)
T ss_dssp EEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEEC
T ss_pred hhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEee
Confidence 45799999999999984 4688999999987766666789999999999999999999999874 4568899999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++|+|.+++.... ..+++..+.+|+
T Consensus 108 ~~~~~L~~~l~~~~--~~~~~~~~~~i~ 133 (327)
T 3lxl_A 108 LPSGCLRDFLQRHR--ARLDASRLLLYS 133 (327)
T ss_dssp CTTCBHHHHHHHHG--GGCCHHHHHHHH
T ss_pred cCCCCHHHHHHhcc--cCCCHHHHHHHH
Confidence 99999999998642 246777766654
No 218
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.17 E-value=3.6e-11 Score=119.50 Aligned_cols=99 Identities=19% Similarity=0.313 Sum_probs=83.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|... ++..||+|.+..... ..++|.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 96 (288)
T 3kfa_A 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96 (288)
T ss_dssp EEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEH
T ss_pred EeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcH
Confidence 457999999999999985 589999999976543 347799999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhcccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.+++... ....+++..+.+++
T Consensus 97 ~~~~~~~-~~~~~~~~~~~~i~ 117 (288)
T 3kfa_A 97 LDYLREC-NRQEVSAVVLLYMA 117 (288)
T ss_dssp HHHHHHC-CTTTSCHHHHHHHH
T ss_pred HHHHHhc-ccCCccHhHHHHHH
Confidence 9999864 23456776665543
No 219
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.16 E-value=6.1e-11 Score=120.03 Aligned_cols=95 Identities=16% Similarity=0.244 Sum_probs=79.9
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+++.. +|+.||+|+++... ....+.+.+|+.++..++||||+++++++...+..++||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 457999999999999984 79999999997542 23456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhc
Q 043706 560 GCLASFSFTHASKFHLFFAIIH 581 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~ 581 (586)
|+|.+++... ..+++..+.
T Consensus 91 g~L~~~l~~~---~~~~~~~~~ 109 (318)
T 1fot_A 91 GELFSLLRKS---QRFPNPVAK 109 (318)
T ss_dssp CBHHHHHHHT---SSCCHHHHH
T ss_pred CCHHHHHHHc---CCCCHHHHH
Confidence 9999999864 234554443
No 220
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.15 E-value=8.1e-11 Score=117.78 Aligned_cols=99 Identities=19% Similarity=0.271 Sum_probs=79.4
Q ss_pred cceeecCCceEEEEEEe-----CCCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeC--CeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL-----ADGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWED--EEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-----~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~e 555 (586)
.+.||+|+||.||+|++ .+|+.||||+++... ....+.+.+|++++.+++|+||+++++++... ...++|||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 105 (302)
T 4e5w_A 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105 (302)
T ss_dssp EEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEE
T ss_pred hhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEE
Confidence 45799999999999984 468999999997543 34457799999999999999999999999876 66899999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+++|+|.+++.... ..+++..+.+|+
T Consensus 106 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~ 132 (302)
T 4e5w_A 106 FLPSGSLKEYLPKNK--NKINLKQQLKYA 132 (302)
T ss_dssp CCTTCBHHHHHHHHT--TTCCHHHHHHHH
T ss_pred eCCCCcHHHHHHhcc--ccCCHHHHHHHH
Confidence 999999999997642 236676666554
No 221
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.15 E-value=1.2e-10 Score=117.75 Aligned_cols=97 Identities=18% Similarity=0.241 Sum_probs=80.5
Q ss_pred cceeecCCceEEEEEEe-----CCCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeC--CeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL-----ADGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWED--EEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-----~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~e 555 (586)
.+.||+|+||.||++.+ .+|+.||||+++... ....+.|.+|++++.+++||||+++++++... ...++|||
T Consensus 36 ~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 115 (318)
T 3lxp_A 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115 (318)
T ss_dssp EEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEEC
T ss_pred hheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEe
Confidence 45799999999999875 268899999997653 34457799999999999999999999999884 57889999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+++|+|.+++... .+++..+.+|+
T Consensus 116 ~~~~~~L~~~l~~~----~~~~~~~~~i~ 140 (318)
T 3lxp_A 116 YVPLGSLRDYLPRH----SIGLAQLLLFA 140 (318)
T ss_dssp CCTTCBHHHHGGGS----CCCHHHHHHHH
T ss_pred cccCCcHHHHHhhC----CCCHHHHHHHH
Confidence 99999999999764 26676666554
No 222
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.15 E-value=5.2e-11 Score=119.83 Aligned_cols=101 Identities=23% Similarity=0.277 Sum_probs=83.8
Q ss_pred cceeecCCceEEEEEEe------CCCcEEEEEEecccc-hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL------ADGTTLAVRRIGETC-FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 555 (586)
.+.||+|+||.||+|+. .++..||||.++... ....+.|.+|++++.++ +||||++++++|...+..++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 107 (313)
T 1t46_A 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITE 107 (313)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEe
Confidence 46799999999999984 357899999997653 34457799999999999 99999999999999999999999
Q ss_pred ccCCCCHHHHHhccCC---------------CCCccHHhhcccc
Q 043706 556 YVSNGCLASFSFTHAS---------------KFHLFFAIIHPFG 584 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~---------------~~~l~w~~r~~~~ 584 (586)
|+++|+|.+++..... ...++|..+.+|+
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (313)
T 1t46_A 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFS 151 (313)
T ss_dssp CCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHH
T ss_pred cCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHH
Confidence 9999999999986522 1247777766554
No 223
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.15 E-value=9e-11 Score=118.81 Aligned_cols=97 Identities=23% Similarity=0.231 Sum_probs=81.9
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch------hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+++.. +|..||+|.++.... ...++|.+|++++.+++||||+++++++...+..++||||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (321)
T 2a2a_A 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILEL 96 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEc
Confidence 467999999999999984 799999999965422 1357799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+++|+|.+++... ..+++..+.+|
T Consensus 97 ~~~~~L~~~l~~~---~~~~~~~~~~i 120 (321)
T 2a2a_A 97 VSGGELFDFLAQK---ESLSEEEATSF 120 (321)
T ss_dssp CCSCBHHHHHHTC---SCEEHHHHHHH
T ss_pred CCCCcHHHHHHhc---CCCCHHHHHHH
Confidence 9999999999754 34566655544
No 224
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.15 E-value=6.4e-11 Score=118.53 Aligned_cols=98 Identities=23% Similarity=0.305 Sum_probs=80.2
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
...||+|+||.||+|... +|..||+|.+........++|.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 357999999999999985 6899999999876666668899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++.... ..+++..+.++
T Consensus 104 ~~~~~~~~--~~~~~~~~~~~ 122 (302)
T 2j7t_A 104 DAIMLELD--RGLTEPQIQVV 122 (302)
T ss_dssp HHHHHHHT--SCCCHHHHHHH
T ss_pred HHHHHhhc--cCCCHHHHHHH
Confidence 99987642 23566655444
No 225
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.15 E-value=6.4e-11 Score=120.62 Aligned_cols=101 Identities=22% Similarity=0.273 Sum_probs=81.7
Q ss_pred cceeecCCceEEEEEEe--------CCCcEEEEEEeccc-chhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEE
Q 043706 484 AYILCTSSSSIVYKAVL--------ADGTTLAVRRIGET-CFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLI 553 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~--------~~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 553 (586)
.+.||+|+||.||+|.. .++..||||+++.. .....+++.+|++++.++ +||||++++++|...+..++|
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 119 (334)
T 2pvf_A 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVI 119 (334)
T ss_dssp EEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEE
T ss_pred eeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEE
Confidence 46799999999999986 24678999999765 334457799999999999 999999999999999999999
Q ss_pred EeccCCCCHHHHHhccCC-------------CCCccHHhhcccc
Q 043706 554 HDYVSNGCLASFSFTHAS-------------KFHLFFAIIHPFG 584 (586)
Q Consensus 554 ~ey~~~GsL~~~L~~~~~-------------~~~l~w~~r~~~~ 584 (586)
|||+++|+|.+++..... ...++|..+.+|+
T Consensus 120 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 163 (334)
T 2pvf_A 120 VEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163 (334)
T ss_dssp EECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHH
T ss_pred EECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHH
Confidence 999999999999986521 1236777666554
No 226
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.15 E-value=5.3e-11 Score=131.42 Aligned_cols=96 Identities=15% Similarity=0.221 Sum_probs=80.3
Q ss_pred eeecCCceEEEEEEeC---CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 486 ILCTSSSSIVYKAVLA---DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 486 ~lg~g~~g~vy~~~~~---~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|+++|.+++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999873 56789999997653 3456789999999999999999999999975 56899999999999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.++|+.. ...++|..+.+++
T Consensus 422 L~~~l~~~--~~~l~~~~~~~i~ 442 (613)
T 2ozo_A 422 LHKFLVGK--REEIPVSNVAELL 442 (613)
T ss_dssp HHHHHTTC--TTTSCHHHHHHHH
T ss_pred HHHHHhhc--cCCCCHHHHHHHH
Confidence 99999764 2347777666553
No 227
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.15 E-value=1e-10 Score=116.39 Aligned_cols=97 Identities=14% Similarity=0.221 Sum_probs=80.7
Q ss_pred ceeecCCceEEEEEEeC---CCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 485 YILCTSSSSIVYKAVLA---DGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~---~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
..||+|+||.||+|+.. ++..||||.++.. .....++|.+|++++.+++||||+++++++ ..+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCC
Confidence 47999999999999863 6789999999765 334557899999999999999999999999 566789999999999
Q ss_pred CHHHHHhccCCCCCccHHhhcccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|.+++... ...+++..+.+|+
T Consensus 95 ~L~~~l~~~--~~~~~~~~~~~~~ 116 (287)
T 1u59_A 95 PLHKFLVGK--REEIPVSNVAELL 116 (287)
T ss_dssp EHHHHHTTC--TTTSCHHHHHHHH
T ss_pred CHHHHHHhC--CccCCHHHHHHHH
Confidence 999999754 2346777666553
No 228
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.15 E-value=8e-11 Score=116.38 Aligned_cols=101 Identities=22% Similarity=0.219 Sum_probs=83.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEe--CCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWE--DEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||++... +|+.||+|.+... .....+.|.+|++++.+++||||+++++++.. .+..++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 357999999999999984 7999999999754 33445679999999999999999999999865 568899999999
Q ss_pred CCCHHHHHhcc-CCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTH-ASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~-~~~~~l~w~~r~~~~ 584 (586)
+|+|.+++... .....++|..+.+++
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~~~i~ 117 (279)
T 2w5a_A 91 GGDLASVITKGTKERQYLDEEFVLRVM 117 (279)
T ss_dssp TEEHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CCCHHHHHHhhcccCCCCCHHHHHHHH
Confidence 99999999864 223457777666553
No 229
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.15 E-value=6.7e-11 Score=122.95 Aligned_cols=101 Identities=22% Similarity=0.215 Sum_probs=83.7
Q ss_pred cceeecCCceEEEEEEe--------CCCcEEEEEEeccc-chhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEE
Q 043706 484 AYILCTSSSSIVYKAVL--------ADGTTLAVRRIGET-CFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLI 553 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~--------~~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 553 (586)
.+.||+|+||.||+|+. ..+..||||+++.. .....+++.+|++++.++ +|||||+++++|...+..++|
T Consensus 74 ~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv 153 (382)
T 3tt0_A 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 153 (382)
T ss_dssp EEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEE
Confidence 46799999999999985 23468999999765 334457799999999999 999999999999999999999
Q ss_pred EeccCCCCHHHHHhccCC-------------CCCccHHhhcccc
Q 043706 554 HDYVSNGCLASFSFTHAS-------------KFHLFFAIIHPFG 584 (586)
Q Consensus 554 ~ey~~~GsL~~~L~~~~~-------------~~~l~w~~r~~~~ 584 (586)
|||+++|+|.+++..... ...++|..+.+|+
T Consensus 154 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 197 (382)
T 3tt0_A 154 VEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA 197 (382)
T ss_dssp EECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHH
T ss_pred EEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHH
Confidence 999999999999987521 1347787776654
No 230
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.15 E-value=5e-11 Score=119.97 Aligned_cols=86 Identities=31% Similarity=0.393 Sum_probs=75.8
Q ss_pred cceeecCCceEEEEEEe------CCCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL------ADGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~------~~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|+. .++..||||.++.. .....+++.+|++++.+++||||+++++++...+..++||||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 107 (314)
T 2ivs_A 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEY 107 (314)
T ss_dssp EEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEee
Confidence 46799999999999986 24589999999754 334457799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcc
Q 043706 557 VSNGCLASFSFTH 569 (586)
Q Consensus 557 ~~~GsL~~~L~~~ 569 (586)
+++|+|.+++...
T Consensus 108 ~~~~~L~~~l~~~ 120 (314)
T 2ivs_A 108 AKYGSLRGFLRES 120 (314)
T ss_dssp CTTCBHHHHHHHT
T ss_pred cCCCCHHHHHHHH
Confidence 9999999999865
No 231
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.15 E-value=5.5e-11 Score=120.85 Aligned_cols=86 Identities=17% Similarity=0.223 Sum_probs=70.1
Q ss_pred cceeecCCceEEEEEEe----CCCcEEEEEEecccc----hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL----ADGTTLAVRRIGETC----FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 555 (586)
.+.||+|+||.||+++. .+|+.||+|+++... ....+.+.+|++++..++||||+++++++...+..++|||
T Consensus 22 ~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 101 (327)
T 3a62_A 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILE 101 (327)
T ss_dssp EEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEe
Confidence 45799999999999987 478999999997642 2234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhcc
Q 043706 556 YVSNGCLASFSFTH 569 (586)
Q Consensus 556 y~~~GsL~~~L~~~ 569 (586)
|+++|+|.+++...
T Consensus 102 ~~~~~~L~~~l~~~ 115 (327)
T 3a62_A 102 YLSGGELFMQLERE 115 (327)
T ss_dssp CCTTEEHHHHHHHH
T ss_pred CCCCCcHHHHHHhC
Confidence 99999999999764
No 232
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.15 E-value=6.1e-11 Score=123.12 Aligned_cols=97 Identities=15% Similarity=0.201 Sum_probs=81.5
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
...||+|+||.||++... +|+.||+|.+.... ....+.+.+|++++..++|||||++++++...+..++||||+++
T Consensus 20 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~g 99 (384)
T 4fr4_A 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLG 99 (384)
T ss_dssp EEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 457999999999999984 68999999996542 23356799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+..|
T Consensus 100 g~L~~~l~~~---~~l~~~~~~~~ 120 (384)
T 4fr4_A 100 GDLRYHLQQN---VHFKEETVKLF 120 (384)
T ss_dssp EEHHHHHHTT---CCCCHHHHHHH
T ss_pred CcHHHHHHhc---CCCCHHHHHHH
Confidence 9999999864 23556555443
No 233
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.15 E-value=1.2e-10 Score=117.23 Aligned_cols=100 Identities=19% Similarity=0.254 Sum_probs=81.3
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc---chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET---CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|.. .+|..||||+++.. .....++|.+|++++.+++|+||+++++++...+..++||||+++
T Consensus 37 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 116 (310)
T 2wqm_A 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 116 (310)
T ss_dssp EEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCS
T ss_pred EEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCC
Confidence 45799999999999997 57999999999753 334457799999999999999999999999999999999999999
Q ss_pred CCHHHHHhcc-CCCCCccHHhhccc
Q 043706 560 GCLASFSFTH-ASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~-~~~~~l~w~~r~~~ 583 (586)
|+|.+++... .....+++..+.++
T Consensus 117 ~~L~~~l~~~~~~~~~~~~~~~~~i 141 (310)
T 2wqm_A 117 GDLSRMIKHFKKQKRLIPERTVWKY 141 (310)
T ss_dssp CBHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred CCHHHHHHHhcccccCCCHHHHHHH
Confidence 9999999753 22344666655544
No 234
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.15 E-value=6.9e-11 Score=130.91 Aligned_cols=97 Identities=18% Similarity=0.161 Sum_probs=80.0
Q ss_pred cceeecCCceEEEEEEe---CCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVL---ADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~---~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+|.+ ..+..||||+++... ....++|.+|++++.+++|||||+++++|. .+..++|||||+
T Consensus 374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~ 452 (635)
T 4fl3_A 374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAE 452 (635)
T ss_dssp EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCT
T ss_pred CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccC
Confidence 35799999999999976 356899999997643 334578999999999999999999999996 456889999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|+|.++|+.. ..++|..+.+|+
T Consensus 453 ~g~L~~~l~~~---~~l~~~~~~~i~ 475 (635)
T 4fl3_A 453 LGPLNKYLQQN---RHVKDKNIIELV 475 (635)
T ss_dssp TEEHHHHHHHC---TTCCHHHHHHHH
T ss_pred CCCHHHHHhhC---CCCCHHHHHHHH
Confidence 99999999754 346777666554
No 235
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.15 E-value=3.7e-11 Score=120.91 Aligned_cols=95 Identities=19% Similarity=0.280 Sum_probs=77.7
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.+.||+|+||.||++... ++.||||++.... ..+.|.+|++++.+++||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 457999999999999984 7889999997543 3467999999999999999999999886 4578999999999999
Q ss_pred HHHhccCCCCCccHHhhccc
Q 043706 564 SFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~ 583 (586)
++++.......+++..+.+|
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~ 107 (307)
T 2eva_A 88 NVLHGAEPLPYYTAAHAMSW 107 (307)
T ss_dssp HHHHCSSSEECCCHHHHHHH
T ss_pred HHHhccCCCCccCHHHHHHH
Confidence 99987533334566555444
No 236
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.14 E-value=7.5e-11 Score=121.42 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=81.9
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||++... +|..||+|++... .....+.+.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 117 (360)
T 3eqc_A 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 117 (360)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCC
Confidence 357999999999999984 7999999999765 33445779999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.+++... ..+++..+.+|
T Consensus 118 L~~~l~~~---~~~~~~~~~~i 136 (360)
T 3eqc_A 118 LDQVLKKA---GRIPEQILGKV 136 (360)
T ss_dssp HHHHHHHH---SSCCHHHHHHH
T ss_pred HHHHHHHc---CCCCHHHHHHH
Confidence 99999865 23555544433
No 237
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.14 E-value=1.2e-10 Score=116.09 Aligned_cols=98 Identities=10% Similarity=0.122 Sum_probs=82.3
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEeccc---chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGET---CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||++... +|..+|+|.+... .....+.+.+|+.++..++|+||+++++++...+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 467999999999999985 6899999999654 233456799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++... ..+++..+.+|+
T Consensus 100 ~~L~~~~~~~---~~~~~~~~~~i~ 121 (294)
T 2rku_A 100 RSLLELHKRR---KALTEPEARYYL 121 (294)
T ss_dssp CBHHHHHHHH---CSCCHHHHHHHH
T ss_pred CCHHHHHHhc---CCCCHHHHHHHH
Confidence 9999998754 246666655543
No 238
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.14 E-value=1.1e-10 Score=119.58 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=79.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+++.. +|+.||+|+++... ....+.+.+|+.++.++ +||||+++++++...+..++||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 457999999999999984 68999999997542 23346688999999988 89999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
+|+|.+++... ..+++..+..
T Consensus 94 gg~L~~~l~~~---~~l~~~~~~~ 114 (345)
T 3a8x_A 94 GGDLMFHMQRQ---RKLPEEHARF 114 (345)
T ss_dssp SCBHHHHHHHH---SSCCHHHHHH
T ss_pred CCcHHHHHHHc---CCCCHHHHHH
Confidence 99999999764 2355554443
No 239
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.14 E-value=8.6e-11 Score=120.72 Aligned_cols=97 Identities=15% Similarity=0.152 Sum_probs=80.3
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.++||+|+||.||+++.. +|+.||||+++... ....+.+.+|.+++..+ +||||+++++++...+..++|||||+
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 457999999999999984 79999999997542 23446688999999988 69999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|+|.+++... ..+++..+..|
T Consensus 108 gg~L~~~l~~~---~~~~~~~~~~~ 129 (353)
T 3txo_A 108 GGDLMFHIQKS---RRFDEARARFY 129 (353)
T ss_dssp SCBHHHHHHHH---SSCCHHHHHHH
T ss_pred CCcHHHHHHHc---CCCCHHHHHHH
Confidence 99999999865 23555544433
No 240
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.14 E-value=7.6e-11 Score=124.89 Aligned_cols=97 Identities=25% Similarity=0.187 Sum_probs=79.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|.. .+|+.+|+|.+.... ....+.+.+|++++.+++|||||++++++...+..++||||+++|
T Consensus 16 ~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg 95 (444)
T 3soa_A 16 FEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95 (444)
T ss_dssp EEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCC
T ss_pred EEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCC
Confidence 46799999999999987 579999999997543 334567999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++... ..+++..+.+|
T Consensus 96 ~L~~~i~~~---~~~~e~~~~~i 115 (444)
T 3soa_A 96 ELFEDIVAR---EYYSEADASHC 115 (444)
T ss_dssp BHHHHHHHC---SCCCHHHHHHH
T ss_pred CHHHHHHHc---CCCCHHHHHHH
Confidence 999999865 23555544443
No 241
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.14 E-value=1.2e-10 Score=115.40 Aligned_cols=97 Identities=24% Similarity=0.246 Sum_probs=81.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|... +|..||+|++... .....+.+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 357999999999999984 6999999999654 3344567899999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++... ..+++..+.+|
T Consensus 91 ~l~~~~~~~---~~~~~~~~~~~ 110 (284)
T 3kk8_A 91 ELFEDIVAR---EFYSEADASHC 110 (284)
T ss_dssp BHHHHHHHH---SSCCHHHHHHH
T ss_pred CHHHHHHhc---CCCCHHHHHHH
Confidence 999998765 23556555444
No 242
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.14 E-value=5.4e-11 Score=121.56 Aligned_cols=86 Identities=23% Similarity=0.286 Sum_probs=73.5
Q ss_pred cceeecCCceEEEEEEe------CCCcEEEEEEecccc-hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL------ADGTTLAVRRIGETC-FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 555 (586)
.+.||+|+||.||+|+. .++..||||.++... ....+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 50 ~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e 129 (344)
T 1rjb_A 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFE 129 (344)
T ss_dssp EEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEe
Confidence 56899999999999986 246789999997542 23346799999999999 99999999999999999999999
Q ss_pred ccCCCCHHHHHhcc
Q 043706 556 YVSNGCLASFSFTH 569 (586)
Q Consensus 556 y~~~GsL~~~L~~~ 569 (586)
|+++|+|.+++...
T Consensus 130 ~~~~g~L~~~l~~~ 143 (344)
T 1rjb_A 130 YCCYGDLLNYLRSK 143 (344)
T ss_dssp CCTTCBHHHHHHTT
T ss_pred cCCCCcHHHHHhhc
Confidence 99999999999865
No 243
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.14 E-value=3.7e-11 Score=125.91 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=74.9
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. +|+.||+|+++.... ...+.+.+|+.++..++|||||+++++|...+..++|||||++
T Consensus 74 ~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~g 153 (410)
T 3v8s_A 74 VKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPG 153 (410)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999985 689999999965321 2224588999999999999999999999999999999999999
Q ss_pred CCHHHHHhcc
Q 043706 560 GCLASFSFTH 569 (586)
Q Consensus 560 GsL~~~L~~~ 569 (586)
|+|.++++..
T Consensus 154 g~L~~~l~~~ 163 (410)
T 3v8s_A 154 GDLVNLMSNY 163 (410)
T ss_dssp EEHHHHHHHC
T ss_pred CcHHHHHHcC
Confidence 9999999764
No 244
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.14 E-value=8.4e-11 Score=127.71 Aligned_cols=99 Identities=12% Similarity=0.062 Sum_probs=82.7
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.++||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++..++|||||++++++...+..++|||||++
T Consensus 189 ~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~g 268 (576)
T 2acx_A 189 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 268 (576)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCC
Confidence 468999999999999984 79999999996542 23346689999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... +...+++..+..+
T Consensus 269 g~L~~~l~~~-~~~~l~e~~~~~i 291 (576)
T 2acx_A 269 GDLKFHIYHM-GQAGFPEARAVFY 291 (576)
T ss_dssp CBHHHHHHSS-SSCCCCHHHHHHH
T ss_pred CcHHHHHHhc-CCCCCCHHHHHHH
Confidence 9999999865 2234666655444
No 245
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.14 E-value=5.2e-11 Score=124.82 Aligned_cols=97 Identities=9% Similarity=0.081 Sum_probs=80.0
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.++||+|+||.||+++.. +|+.||+|+++.... ...+.+.+|..++..++|+||+++++++...+..++|||||++
T Consensus 66 ~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~g 145 (412)
T 2vd5_A 66 LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVG 145 (412)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCC
Confidence 468999999999999984 799999999975422 2234588999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
|+|.++|+... ..+++..+..
T Consensus 146 g~L~~~l~~~~--~~l~~~~~~~ 166 (412)
T 2vd5_A 146 GDLLTLLSKFG--ERIPAEMARF 166 (412)
T ss_dssp CBHHHHHHHHS--SCCCHHHHHH
T ss_pred CcHHHHHHhcC--CCCCHHHHHH
Confidence 99999998642 2355554433
No 246
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.14 E-value=7.7e-11 Score=120.64 Aligned_cols=97 Identities=12% Similarity=0.179 Sum_probs=80.2
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.++||+|+||.||+|+.. +|+.||+|+++... ....+.+..|.+++..+ +||||+++++++...+..++||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 457999999999999984 79999999997542 23346688999999887 99999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|+|.+++... ..+++..+..+
T Consensus 102 gg~L~~~l~~~---~~~~~~~~~~~ 123 (345)
T 1xjd_A 102 GGDLMYHIQSC---HKFDLSRATFY 123 (345)
T ss_dssp TCBHHHHHHHH---SSCCHHHHHHH
T ss_pred CCcHHHHHHHc---CCCCHHHHHHH
Confidence 99999999864 23555554433
No 247
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.14 E-value=8.8e-11 Score=119.15 Aligned_cols=99 Identities=21% Similarity=0.350 Sum_probs=82.2
Q ss_pred cceeecCCceEEEEEEe-----CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCC--eEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL-----ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE--EKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-----~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ey 556 (586)
.+.||+|+||.||++.+ .+|+.||||++........++|.+|++++.+++|+||+++++++...+ ..++|+||
T Consensus 46 ~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 125 (326)
T 2w1i_A 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEY 125 (326)
T ss_dssp EEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECC
T ss_pred eeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEEC
Confidence 46799999999999984 368999999998766656678999999999999999999999987654 67899999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++|+|.+++.... ..+++..+.+|+
T Consensus 126 ~~~~~L~~~l~~~~--~~~~~~~~~~i~ 151 (326)
T 2w1i_A 126 LPYGSLRDYLQKHK--ERIDHIKLLQYT 151 (326)
T ss_dssp CTTCBHHHHHHHST--TSSCHHHHHHHH
T ss_pred CCCCCHHHHHHhcc--cCCCHHHHHHHH
Confidence 99999999998652 246777666553
No 248
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.13 E-value=5e-11 Score=117.97 Aligned_cols=98 Identities=20% Similarity=0.276 Sum_probs=80.5
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.+.||+|+||.||+|...++..||||.++.... ..+.|.+|++++.+++||||+++++++. .+..++||||+++|+|.
T Consensus 18 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 95 (279)
T 1qpc_A 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLV 95 (279)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHH
T ss_pred eeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHH
Confidence 457999999999999998888999999976543 3477999999999999999999999986 55689999999999999
Q ss_pred HHHhccCCCCCccHHhhcccc
Q 043706 564 SFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 564 ~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++... ....+++..+.+++
T Consensus 96 ~~l~~~-~~~~~~~~~~~~i~ 115 (279)
T 1qpc_A 96 DFLKTP-SGIKLTINKLLDMA 115 (279)
T ss_dssp HHTTSH-HHHTCCHHHHHHHH
T ss_pred HHHhcC-CCCCCCHHHHHHHH
Confidence 999754 11246676665543
No 249
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.13 E-value=9.3e-11 Score=120.32 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=80.0
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+++.. +|+.||+|+++... ....+.+.+|++++..++||||+++++++...+..++||||+++
T Consensus 46 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 125 (350)
T 1rdq_E 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125 (350)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCC
Confidence 357999999999999984 79999999996542 23456789999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhc
Q 043706 560 GCLASFSFTHASKFHLFFAIIH 581 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~ 581 (586)
|+|.+++... ..+++..+.
T Consensus 126 g~L~~~l~~~---~~~~~~~~~ 144 (350)
T 1rdq_E 126 GEMFSHLRRI---GRFSEPHAR 144 (350)
T ss_dssp CBHHHHHHHH---CCCCHHHHH
T ss_pred CcHHHHHHHc---CCCCHHHHH
Confidence 9999999864 224554443
No 250
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.13 E-value=1.4e-10 Score=115.37 Aligned_cols=97 Identities=13% Similarity=0.248 Sum_probs=79.5
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEe----CCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWE----DEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ey 556 (586)
...||+|+||.||+|.. .++..||+|.+... .....+.|.+|+.++.+++||||+++++++.. ....++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 34799999999999988 47889999999754 33445779999999999999999999999876 3468899999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+++|+|.+++... ..+++..+.+|
T Consensus 111 ~~~~~L~~~l~~~---~~~~~~~~~~~ 134 (290)
T 1t4h_A 111 MTSGTLKTYLKRF---KVMKIKVLRSW 134 (290)
T ss_dssp CCSCBHHHHHHHH---SSCCHHHHHHH
T ss_pred cCCCCHHHHHHHc---cCCCHHHHHHH
Confidence 9999999999764 23566655544
No 251
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.13 E-value=1.4e-10 Score=118.11 Aligned_cols=97 Identities=10% Similarity=0.138 Sum_probs=81.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEeccc---chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGET---CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||++... ++..+|+|.+... .....+.|.+|+.++..++|+||+++++++...+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 467999999999999984 6889999999654 234457799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.++
T Consensus 126 ~~L~~~~~~~---~~l~~~~~~~i 146 (335)
T 2owb_A 126 RSLLELHKRR---KALTEPEARYY 146 (335)
T ss_dssp CBHHHHHHHH---CSCCHHHHHHH
T ss_pred CCHHHHHhcc---CCCCHHHHHHH
Confidence 9999998764 24666655544
No 252
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.13 E-value=9.5e-11 Score=115.85 Aligned_cols=99 Identities=19% Similarity=0.295 Sum_probs=82.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch---hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 45799999999999997 5799999999965422 2246799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++... ...+++..+.+|+
T Consensus 96 ~~L~~~l~~~--~~~~~~~~~~~~~ 118 (278)
T 3cok_A 96 GEMNRYLKNR--VKPFSENEARHFM 118 (278)
T ss_dssp EEHHHHHHTC--SSCCCHHHHHHHH
T ss_pred CcHHHHHhhc--cCCCCHHHHHHHH
Confidence 9999999864 2346666655543
No 253
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.13 E-value=9.4e-11 Score=120.95 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=81.2
Q ss_pred cceeecCCceEEEEEE------eCCCcEEEEEEecccchhhHHHHHHHHHHHHccC---CCCccceeEEEEeCCeEEEEE
Q 043706 484 AYILCTSSSSIVYKAV------LADGTTLAVRRIGETCFERLKDLESQVKAIAKLK---HPNLVKLRGFYWEDEEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~------~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ 554 (586)
.+.||+|+||.||+|+ ..+++.||||+++.... .+|..|++++.+++ |+||+++++++...+..++||
T Consensus 70 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 4579999999999994 35789999999976543 56888888888887 999999999999999999999
Q ss_pred eccCCCCHHHHHhcc--CCCCCccHHhhcccc
Q 043706 555 DYVSNGCLASFSFTH--ASKFHLFFAIIHPFG 584 (586)
Q Consensus 555 ey~~~GsL~~~L~~~--~~~~~l~w~~r~~~~ 584 (586)
|||++|+|.++++.. .....++|..+.+|+
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~ 178 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 178 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHH
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHH
Confidence 999999999999863 123568888777664
No 254
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.12 E-value=1.3e-10 Score=125.50 Aligned_cols=98 Identities=14% Similarity=0.171 Sum_probs=79.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch-------------hhHHHHHHHHHHHHccCCCCccceeEEEEeCCe
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF-------------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEE 549 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~-------------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~ 549 (586)
.+.||+|+||.||+|+.. +|..||+|++..... ...+++.+|++++.+++||||++++++|...+.
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 457999999999999984 689999999965421 234679999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 550 KLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 550 ~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.++||||+++|+|.+++... ..+++..+.+|+
T Consensus 121 ~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~ 152 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIINR---HKFDECDAANIM 152 (504)
T ss_dssp EEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHH
T ss_pred EEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHH
Confidence 99999999999999999765 346666655543
No 255
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.12 E-value=1.6e-10 Score=118.56 Aligned_cols=98 Identities=22% Similarity=0.329 Sum_probs=81.0
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+. .+|+.||||++.... ....++|.+|++++.+++||||++++++|...+..++||||++
T Consensus 59 ~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~- 137 (348)
T 1u5q_A 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 137 (348)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred eeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-
Confidence 46799999999999997 579999999996542 2334679999999999999999999999999999999999998
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++.... ..++|..+.+|+
T Consensus 138 g~l~~~l~~~~--~~l~~~~~~~i~ 160 (348)
T 1u5q_A 138 GSASDLLEVHK--KPLQEVEIAAVT 160 (348)
T ss_dssp EEHHHHHHHHT--SCCCHHHHHHHH
T ss_pred CCHHHHHHHhc--CCCCHHHHHHHH
Confidence 78998886542 346776665543
No 256
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.12 E-value=7.6e-11 Score=116.01 Aligned_cols=95 Identities=22% Similarity=0.350 Sum_probs=75.3
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccch----hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCF----ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~----~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|... |..||||+++.... ...+.+.+|++++..++||||++++++|...+..++||||+++
T Consensus 12 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 90 (271)
T 3dtc_A 12 EEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARG 90 (271)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTT
T ss_pred eeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCC
Confidence 457999999999999974 89999999965422 2346799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... .+++..+.+|
T Consensus 91 ~~L~~~~~~~----~~~~~~~~~i 110 (271)
T 3dtc_A 91 GPLNRVLSGK----RIPPDILVNW 110 (271)
T ss_dssp EEHHHHHTSS----CCCHHHHHHH
T ss_pred CCHHHHhhcC----CCCHHHHHHH
Confidence 9999998643 3556555444
No 257
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.12 E-value=1.7e-10 Score=115.26 Aligned_cols=97 Identities=23% Similarity=0.253 Sum_probs=80.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---------hhhHHHHHHHHHHHHccC-CCCccceeEEEEeCCeEEE
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---------FERLKDLESQVKAIAKLK-HPNLVKLRGFYWEDEEKLL 552 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---------~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~l 552 (586)
.+.||+|+||.||+|... +|+.||||.++... ....+.+.+|++++.+++ ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 457999999999999984 78999999996542 122466889999999996 9999999999999999999
Q ss_pred EEeccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 553 IHDYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 553 v~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
||||+++|+|.+++... ..+++..+.++
T Consensus 102 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~ 129 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEK---VTLSEKETRKI 129 (298)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHH
T ss_pred EEeccCCCcHHHHHhcc---CCCCHHHHHHH
Confidence 99999999999999864 24566555444
No 258
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.12 E-value=1.5e-10 Score=118.30 Aligned_cols=84 Identities=18% Similarity=0.268 Sum_probs=74.8
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc-----chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET-----CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~-----~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|.. .++..||+|++... .....+.|.+|++++.+++||||++++++|...+..++||||+
T Consensus 31 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 110 (345)
T 3hko_A 31 KGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELC 110 (345)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCC
Confidence 56899999999999998 47899999999654 2334577999999999999999999999999999999999999
Q ss_pred CCCCHHHHHh
Q 043706 558 SNGCLASFSF 567 (586)
Q Consensus 558 ~~GsL~~~L~ 567 (586)
++|+|.+++.
T Consensus 111 ~gg~L~~~l~ 120 (345)
T 3hko_A 111 HGGHLLDKLN 120 (345)
T ss_dssp CSCBHHHHEE
T ss_pred CCCcHHHHHH
Confidence 9999999996
No 259
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.11 E-value=1.2e-10 Score=117.30 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=78.3
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+..+|+.||+|++.... ....+.+.+|++++.+++||||+++++++...+..++||||+++ +
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-D 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-E
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-C
Confidence 35799999999999999889999999997542 23346789999999999999999999999999999999999984 8
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.+++.... ..+++..+.+|
T Consensus 105 l~~~~~~~~--~~~~~~~~~~~ 124 (311)
T 3niz_A 105 LKKVLDENK--TGLQDSQIKIY 124 (311)
T ss_dssp HHHHHHTCT--TCCCHHHHHHH
T ss_pred HHHHHHhcc--CCCCHHHHHHH
Confidence 888887642 23555555443
No 260
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.11 E-value=1.1e-10 Score=118.87 Aligned_cols=99 Identities=16% Similarity=0.275 Sum_probs=81.4
Q ss_pred cceeecCCceEEEEEEeC-C----CcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLA-D----GTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~----g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|... + +..||||.++.. .....++|.+|++++.+++||||+++++++...+..++||||+
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 468999999999999873 2 346999999765 3344567999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.+++.... ..+++..+.+|+
T Consensus 129 ~~~~L~~~l~~~~--~~~~~~~~~~i~ 153 (333)
T 1mqb_A 129 ENGALDKFLREKD--GEFSVLQLVGML 153 (333)
T ss_dssp TTEEHHHHHHHTT--TCSCHHHHHHHH
T ss_pred CCCcHHHHHHhCC--CCCCHHHHHHHH
Confidence 9999999998642 346676665543
No 261
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.11 E-value=1e-10 Score=121.95 Aligned_cols=96 Identities=17% Similarity=0.187 Sum_probs=78.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
..+||+|+||.||+++.. +|+.||+|+++.... ...+.+..|..++.++ +|||||++++++...+..++|||||+
T Consensus 57 ~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~ 136 (396)
T 4dc2_A 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 136 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCC
Confidence 458999999999999984 689999999976532 2234588999999887 89999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
+|+|.+++... ..+++..+..
T Consensus 137 gg~L~~~l~~~---~~l~~~~~~~ 157 (396)
T 4dc2_A 137 GGDLMFHMQRQ---RKLPEEHARF 157 (396)
T ss_dssp TCBHHHHHHHH---SSCCHHHHHH
T ss_pred CCcHHHHHHHc---CCCCHHHHHH
Confidence 99999999864 2355554443
No 262
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.11 E-value=1.3e-10 Score=118.07 Aligned_cols=194 Identities=18% Similarity=0.165 Sum_probs=139.6
Q ss_pred CceEEEEcCCCCCcccCccccCC-CCCCCEEEccCCCCC--------------------CCCCccccC--------CCCC
Q 043706 88 FRVISLILPNSQLLGSVTKDLGL-IQHLRHLDLSNNFFN--------------------GSLPLSIFS--------ATEL 138 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~-l~~L~~L~Ls~N~l~--------------------g~~p~~~~~--------l~~L 138 (586)
.+++.|.++++ +.+.--..+.. +++|+.|||++|+|. ..-+..|.+ +++|
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L 103 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTL 103 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTC
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCC
Confidence 45777887754 22111122333 889999999999988 112335667 8999
Q ss_pred cEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEecccccC-------C-----c--------
Q 043706 139 QVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSLRSNYF-------S-----G-------- 198 (586)
Q Consensus 139 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l-------~-----g-------- 198 (586)
+.|+|.+ .++...+..|.++++|+.|++++|.+....+..|.++.++..+.+..+.. . +
T Consensus 104 ~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i 182 (329)
T 3sb4_A 104 EKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTI 182 (329)
T ss_dssp CC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEE
T ss_pred cEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeE
Confidence 9999999 88876777899999999999999999877777888888787777655221 0 0
Q ss_pred ------CC----------CC---------------------CCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcC
Q 043706 199 ------SI----------PS---------------------GFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKI 240 (586)
Q Consensus 199 ------~~----------p~---------------------~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l 240 (586)
.+ +. .+++|+.|+|++|+++...+..|.. .+|+.|+|.+| +
T Consensus 183 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i 261 (329)
T 3sb4_A 183 QVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-L 261 (329)
T ss_dssp EECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred EecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-c
Confidence 00 00 1468999999999999777777877 89999999998 6
Q ss_pred CCcCcHHHHhcCCCCc-EEEccCCCCcccCCCCCcC-cccccccccCC
Q 043706 241 SGSISPEFAKRIPQNV-TIDLSFNNLTGAIPGALPL-VNQRMESFSGN 286 (586)
Q Consensus 241 ~g~ip~~~~~~l~~L~-~L~Ls~N~l~g~ip~~~~~-~~~~~~~~~~n 286 (586)
+ .|+...+.++++|+ .|++.+ .++...+..+.. ..+..+.+.+|
T Consensus 262 ~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n 307 (329)
T 3sb4_A 262 K-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGD 307 (329)
T ss_dssp C-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSS
T ss_pred c-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCC
Confidence 6 68877777799999 999998 777666666543 23444444343
No 263
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.11 E-value=1.5e-10 Score=125.16 Aligned_cols=99 Identities=11% Similarity=0.126 Sum_probs=82.8
Q ss_pred ceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 485 YILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
++||+|+||.||+++.. +|+.||+|++..... ...+.+..|++++.+++||||+++++++...+..++|||||++|
T Consensus 191 ~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg 270 (543)
T 3c4z_A 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGG 270 (543)
T ss_dssp EEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCC
Confidence 57999999999999984 799999999965432 33467899999999999999999999999999999999999999
Q ss_pred CHHHHHhccC-CCCCccHHhhccc
Q 043706 561 CLASFSFTHA-SKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~-~~~~l~w~~r~~~ 583 (586)
+|.++|.... ....+++..+..+
T Consensus 271 ~L~~~l~~~~~~~~~l~e~~~~~~ 294 (543)
T 3c4z_A 271 DIRYHIYNVDEDNPGFQEPRAIFY 294 (543)
T ss_dssp BHHHHHHTSSTTSCSCCHHHHHHH
T ss_pred CHHHHHHHhhcccccccHHHHHHH
Confidence 9999998652 2345666655444
No 264
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.11 E-value=1.2e-10 Score=125.38 Aligned_cols=97 Identities=18% Similarity=0.156 Sum_probs=77.3
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|+.. +|..||+|++.... ....+.+.+|++++..++|||||+++++|...+..++||||+++|
T Consensus 42 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 121 (494)
T 3lij_A 42 VKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGG 121 (494)
T ss_dssp EEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCC
Confidence 467999999999999984 78999999997543 233467999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++... ..+++..+.+|
T Consensus 122 ~L~~~~~~~---~~~~~~~~~~i 141 (494)
T 3lij_A 122 ELFDEIIHR---MKFNEVDAAVI 141 (494)
T ss_dssp BHHHHHHHH---SSCCHHHHHHH
T ss_pred cHHHHHHHc---CCCCHHHHHHH
Confidence 999998765 23555544443
No 265
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.11 E-value=4.1e-11 Score=120.73 Aligned_cols=97 Identities=18% Similarity=0.083 Sum_probs=79.4
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCC----eEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE----EKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~e 555 (586)
.+.||+|+||.||+++. .+|+.||||+++... ....+.|.+|++++.+++||||+++++++.... ..++|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 45799999999999997 579999999997642 233467999999999999999999999987654 3499999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+++|+|.++++.. ..+++..+.+|
T Consensus 97 ~~~g~~L~~~l~~~---~~~~~~~~~~~ 121 (311)
T 3ork_A 97 YVDGVTLRDIVHTE---GPMTPKRAIEV 121 (311)
T ss_dssp CCCEEEHHHHHHHH---CSCCHHHHHHH
T ss_pred cCCCCCHHHHHHhc---CCCCHHHHHHH
Confidence 99999999999865 24666665554
No 266
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.11 E-value=1.9e-10 Score=115.72 Aligned_cols=97 Identities=19% Similarity=0.241 Sum_probs=80.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++||||+++++++...+..++||||+++|
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 357999999999999984 69999999986543 233467899999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++... ..+++..+.++
T Consensus 88 ~l~~~~~~~---~~~~~~~~~~i 107 (311)
T 4agu_A 88 VLHELDRYQ---RGVPEHLVKSI 107 (311)
T ss_dssp HHHHHHHTS---SCCCHHHHHHH
T ss_pred hHHHHHhhh---cCCCHHHHHHH
Confidence 999988754 23556554443
No 267
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.10 E-value=2e-10 Score=115.07 Aligned_cols=96 Identities=17% Similarity=0.244 Sum_probs=81.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+. .+|+.||+|.+.... ....+.|.+|+.++.+++|+||+++++++...+..++||||+++|+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 45799999999999987 479999999997543 3345789999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.+++... .+++..+.++
T Consensus 107 L~~~~~~~----~~~~~~~~~~ 124 (303)
T 3a7i_A 107 ALDLLEPG----PLDETQIATI 124 (303)
T ss_dssp HHHHHTTS----CCCHHHHHHH
T ss_pred HHHHHhcC----CCCHHHHHHH
Confidence 99998643 4666665554
No 268
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.10 E-value=2e-10 Score=113.38 Aligned_cols=97 Identities=15% Similarity=0.243 Sum_probs=81.0
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. +|+.||||.+.... ....+.+.+|++.+..++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 457999999999999985 79999999996542 23346799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.++
T Consensus 96 ~~L~~~l~~~---~~~~~~~~~~~ 116 (276)
T 2h6d_A 96 GELFDYICKH---GRVEEMEARRL 116 (276)
T ss_dssp CBHHHHHHHH---CSCCHHHHHHH
T ss_pred CcHHHHHhcc---CCCCHHHHHHH
Confidence 9999999764 23555544433
No 269
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.10 E-value=1.4e-10 Score=124.50 Aligned_cols=97 Identities=18% Similarity=0.154 Sum_probs=81.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++.+++|||||++++++...+..++|+||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 458999999999999984 79999999996432 234577999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++... ..+++..+.+|
T Consensus 107 ~L~~~~~~~---~~~~~~~~~~i 126 (486)
T 3mwu_A 107 ELFDEIIKR---KRFSEHDAARI 126 (486)
T ss_dssp BHHHHHHHH---SSCCHHHHHHH
T ss_pred cHHHHHHhc---CCCCHHHHHHH
Confidence 999998765 23556555444
No 270
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.10 E-value=1.3e-10 Score=115.01 Aligned_cols=97 Identities=19% Similarity=0.200 Sum_probs=80.7
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|... ++..||||++.... ....+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 457999999999999884 68899999996542 22346799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.+|
T Consensus 94 ~~l~~~l~~~---~~~~~~~~~~~ 114 (279)
T 3fdn_A 94 GTVYRELQKL---SKFDEQRTATY 114 (279)
T ss_dssp EEHHHHHHHH---SSCCHHHHHHH
T ss_pred CcHHHHHHhc---CCCCHHHHHHH
Confidence 9999999764 23555555444
No 271
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.10 E-value=2.3e-10 Score=115.19 Aligned_cols=98 Identities=14% Similarity=0.088 Sum_probs=82.7
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||++... +|+.||+|.+..... ...+.|.+|++++.+++||||+++++++...+..++|+||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 457999999999999984 789999999975432 2346799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++... ..+++..+.+|+
T Consensus 119 ~~L~~~l~~~---~~~~~~~~~~i~ 140 (309)
T 2h34_A 119 VDLAAMLRRQ---GPLAPPRAVAIV 140 (309)
T ss_dssp EEHHHHHHHH---CSCCHHHHHHHH
T ss_pred CCHHHHHHhc---CCCCHHHHHHHH
Confidence 9999999864 246666655543
No 272
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.10 E-value=1e-10 Score=124.92 Aligned_cols=97 Identities=15% Similarity=0.231 Sum_probs=81.7
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++..++||||+++++++...+..++||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 457999999999999984 799999999975432 2346799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.++
T Consensus 101 g~L~~~l~~~---~~l~~~~~~~i 121 (476)
T 2y94_A 101 GELFDYICKN---GRLDEKESRRL 121 (476)
T ss_dssp EEHHHHTTSS---SSCCHHHHHHH
T ss_pred CcHHHHHHhc---CCCCHHHHHHH
Confidence 9999999754 34666655444
No 273
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.10 E-value=9e-11 Score=119.71 Aligned_cols=96 Identities=17% Similarity=0.206 Sum_probs=79.8
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch---hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++..++||||+++++++...+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 35799999999999997 5799999999965421 22357899999999999999999999999999999999999 7
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.+|
T Consensus 93 g~l~~~l~~~---~~l~~~~~~~i 113 (336)
T 3h4j_B 93 GELFDYIVEK---KRMTEDEGRRF 113 (336)
T ss_dssp EEHHHHHHHH---CSCCHHHHHHH
T ss_pred CcHHHHHHHc---CCCCHHHHHHH
Confidence 8999999765 23566655544
No 274
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.10 E-value=1.7e-10 Score=115.12 Aligned_cols=99 Identities=16% Similarity=0.267 Sum_probs=80.3
Q ss_pred cceeecCCceEEEEEEeC-C---CcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeE-EEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLA-D---GTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEK-LLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~---g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~-~lv~ey~ 557 (586)
.+.||+|+||.||+|... + +..+|+|.+... .....+.|.+|++++.+++||||+++++++...+.. ++|+||+
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 568999999999999862 2 337999999754 334457899999999999999999999999876655 8999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.+|+|.+++... ...+++..+.+|+
T Consensus 106 ~~~~L~~~~~~~--~~~~~~~~~~~i~ 130 (298)
T 3pls_A 106 CHGDLLQFIRSP--QRNPTVKDLISFG 130 (298)
T ss_dssp TTCBHHHHHHCT--TCCCBHHHHHHHH
T ss_pred cCCCHHHHHhcc--ccCCCHHHHHHHH
Confidence 999999999864 2346676665553
No 275
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.10 E-value=1.4e-10 Score=115.88 Aligned_cols=82 Identities=16% Similarity=0.207 Sum_probs=68.4
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHc--cCCCCccceeEEEEeCC----eEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAK--LKHPNLVKLRGFYWEDE----EKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~~----~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+.. |+.||||+++... .+++..|.+++.. ++||||+++++++...+ ..++||||+
T Consensus 8 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 83 (303)
T 3gxj_A 8 QESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp CEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEecc
Confidence 457999999999999874 8999999997543 3567788888887 79999999999998876 789999999
Q ss_pred CCCCHHHHHhcc
Q 043706 558 SNGCLASFSFTH 569 (586)
Q Consensus 558 ~~GsL~~~L~~~ 569 (586)
++|+|.+++...
T Consensus 84 ~~g~L~~~l~~~ 95 (303)
T 3gxj_A 84 EHGSLFDYLNRY 95 (303)
T ss_dssp TTCCHHHHHHHC
T ss_pred CCCCHHHHHhcc
Confidence 999999999754
No 276
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.10 E-value=1.2e-10 Score=117.94 Aligned_cols=101 Identities=19% Similarity=0.345 Sum_probs=76.5
Q ss_pred cceeecCCceEEEEEEeC-CC---cEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeE------E
Q 043706 484 AYILCTSSSSIVYKAVLA-DG---TTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEK------L 551 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g---~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~------~ 551 (586)
.+.||+|+||.||+|... ++ ..||||.++.. .....++|.+|++++.+++||||+++++++...+.. +
T Consensus 28 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 107 (323)
T 3qup_A 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107 (323)
T ss_dssp EEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEE
T ss_pred eceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccE
Confidence 468999999999999974 33 38999999764 334457899999999999999999999999887655 9
Q ss_pred EEEeccCCCCHHHHHhcc---CCCCCccHHhhcccc
Q 043706 552 LIHDYVSNGCLASFSFTH---ASKFHLFFAIIHPFG 584 (586)
Q Consensus 552 lv~ey~~~GsL~~~L~~~---~~~~~l~w~~r~~~~ 584 (586)
+||||+++|+|.+++... .....+++..+.+|+
T Consensus 108 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~ 143 (323)
T 3qup_A 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143 (323)
T ss_dssp EEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHH
T ss_pred EEEEeccCCcHHHHHHhhhccccccccCHHHHHHHH
Confidence 999999999999999764 122357777776654
No 277
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.10 E-value=1.1e-10 Score=118.44 Aligned_cols=101 Identities=18% Similarity=0.200 Sum_probs=80.6
Q ss_pred cceeecCCceEEEEEEe------CCCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL------ADGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~------~~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|+. .++..||||.+... .....++|.+|+.++.+++||||+++++++...+..++||||
T Consensus 35 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (327)
T 2yfx_A 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMEL 114 (327)
T ss_dssp EEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEec
Confidence 45799999999999984 35789999999754 344556799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhccCC----CCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHAS----KFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~----~~~l~w~~r~~~~ 584 (586)
+++|+|.+++..... ...++|..+.+++
T Consensus 115 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~ 146 (327)
T 2yfx_A 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146 (327)
T ss_dssp CTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHH
T ss_pred CCCCcHHHHHHhhcccccccccccHHHHHHHH
Confidence 999999999987521 2347777665543
No 278
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.10 E-value=1.8e-10 Score=123.71 Aligned_cols=98 Identities=19% Similarity=0.157 Sum_probs=82.9
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+++|||||++++++...+..++|+||+.+
T Consensus 31 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 110 (484)
T 3nyv_A 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110 (484)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCC
Confidence 468999999999999985 79999999996442 33457799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++... ..+++..+.+|+
T Consensus 111 ~~L~~~~~~~---~~~~~~~~~~i~ 132 (484)
T 3nyv_A 111 GELFDEIISR---KRFSEVDAARII 132 (484)
T ss_dssp CBHHHHHHTC---SCCBHHHHHHHH
T ss_pred CCHHHHHHhc---CCCCHHHHHHHH
Confidence 9999999764 346666555443
No 279
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.10 E-value=1.7e-10 Score=113.70 Aligned_cols=97 Identities=20% Similarity=0.168 Sum_probs=81.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|... +|+.||||.+.... ....+.+.+|+.++..++||||+++++++...+..++|+||+++|+
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 457999999999999985 79999999997543 3345779999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.+++... ..+++..+.+|
T Consensus 92 L~~~l~~~---~~~~~~~~~~~ 110 (276)
T 2yex_A 92 LFDRIEPD---IGMPEPDAQRF 110 (276)
T ss_dssp GGGGSBTT---TBCCHHHHHHH
T ss_pred HHHHHhhc---cCCCHHHHHHH
Confidence 99988643 23555554443
No 280
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.09 E-value=2.7e-10 Score=114.81 Aligned_cols=98 Identities=20% Similarity=0.113 Sum_probs=79.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEeccc--chhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGET--CFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+.. +|+.||||++... ......++..|+..+.++ +|+||++++++|...+..++||||+ +
T Consensus 62 ~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~ 140 (311)
T 3p1a_A 62 LSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140 (311)
T ss_dssp EEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-C
T ss_pred eheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-C
Confidence 467999999999999985 7999999998654 233345566777666665 9999999999999999999999999 7
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++.... ..++|..+.+|+
T Consensus 141 ~~L~~~~~~~~--~~l~~~~~~~i~ 163 (311)
T 3p1a_A 141 PSLQQHCEAWG--ASLPEAQVWGYL 163 (311)
T ss_dssp CBHHHHHHHHC--SCCCHHHHHHHH
T ss_pred CCHHHHHHhcC--CCCCHHHHHHHH
Confidence 79999988652 358888777664
No 281
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.09 E-value=5.8e-11 Score=126.11 Aligned_cols=97 Identities=12% Similarity=0.116 Sum_probs=72.8
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc---chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET---CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||++.. .+|+.||||+++.. .....+.+.+|++++..++||||++++++|...+..++|||||++
T Consensus 153 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~ 232 (446)
T 4ejn_A 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG 232 (446)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSS
T ss_pred eEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCC
Confidence 46899999999999997 47999999999754 223345688999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+..|
T Consensus 233 ~~L~~~l~~~---~~~~~~~~~~~ 253 (446)
T 4ejn_A 233 GELFFHLSRE---RVFSEDRARFY 253 (446)
T ss_dssp CBHHHHHHHH---SCCCHHHHHHH
T ss_pred CcHHHHHHhc---CCCCHHHHHHH
Confidence 9999999764 24556555443
No 282
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.09 E-value=1.3e-10 Score=114.96 Aligned_cols=96 Identities=22% Similarity=0.282 Sum_probs=79.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEe----------------
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWE---------------- 546 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~---------------- 546 (586)
.+.||+|+||.||+|... +|+.||+|+++... +.+.+|++++.+++||||+++++++..
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (284)
T 2a19_B 16 IELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSK 91 (284)
T ss_dssp EEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCE
T ss_pred eeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccC
Confidence 467999999999999985 79999999997543 347789999999999999999999865
Q ss_pred CCeEEEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 547 DEEKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 547 ~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
....++||||+++|+|.+++... ....++|..+.+|+
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~ 128 (284)
T 2a19_B 92 TKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELF 128 (284)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHH
T ss_pred cceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHH
Confidence 34578999999999999999764 22357777665553
No 283
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.09 E-value=1.9e-10 Score=114.00 Aligned_cols=98 Identities=16% Similarity=0.238 Sum_probs=79.4
Q ss_pred cceeecCCceEEEEEEeC----CCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA----DGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+|... .+..||+|.++.. .....+.|.+|+.++.+++||||+++++++ ..+..++||||++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~ 98 (281)
T 1mp8_A 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCT 98 (281)
T ss_dssp EEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEECCT
T ss_pred EeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEecCC
Confidence 457999999999999873 2567999999764 334457799999999999999999999998 4567889999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|+|.+++... ...+++..+.+|+
T Consensus 99 ~~~L~~~l~~~--~~~~~~~~~~~~~ 122 (281)
T 1mp8_A 99 LGELRSFLQVR--KYSLDLASLILYA 122 (281)
T ss_dssp TEEHHHHHHHT--TTTSCHHHHHHHH
T ss_pred CCCHHHHHHhc--CCCCCHHHHHHHH
Confidence 99999999865 2346777665543
No 284
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.08 E-value=8.9e-11 Score=117.43 Aligned_cols=96 Identities=18% Similarity=0.217 Sum_probs=74.1
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch--------------------------hhHHHHHHHHHHHHccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF--------------------------ERLKDLESQVKAIAKLKHPN 536 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~--------------------------~~~~~f~~e~~~l~~l~H~n 536 (586)
.+.||+|+||.||+|+. .+|+.||||++..... ...++|.+|++++.+++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 45799999999999997 4789999999965421 11256899999999999999
Q ss_pred ccceeEEEEe--CCeEEEEEeccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 537 LVKLRGFYWE--DEEKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 537 iv~l~g~~~~--~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+++++++.. .+..++||||+++|+|.+++.. ..+++..+.+|
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~ 142 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFY 142 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHH
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHH
Confidence 9999999987 5678999999999999886432 24666655544
No 285
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.08 E-value=1.7e-10 Score=117.17 Aligned_cols=98 Identities=18% Similarity=0.337 Sum_probs=74.9
Q ss_pred cceeecCCceEEEEEEe-CCCc----EEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL-ADGT----TLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~----~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+. .+|. .||+|.++.. .....++|.+|++++.+++||||++++++|...+ .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~~ 98 (327)
T 3poz_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEECC
T ss_pred ceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEec
Confidence 45799999999999996 3454 4688888644 3344578999999999999999999999998754 78999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.++++... ..++|..+.+|+
T Consensus 99 ~~g~L~~~l~~~~--~~~~~~~~~~~~ 123 (327)
T 3poz_A 99 PFGCLLDYVREHK--DNIGSQYLLNWC 123 (327)
T ss_dssp TTCBHHHHHHHST--TSCCHHHHHHHH
T ss_pred CCCcHHHHHHhcC--CCCCHHHHHHHH
Confidence 9999999998752 347777666654
No 286
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.08 E-value=5.2e-11 Score=121.82 Aligned_cols=99 Identities=14% Similarity=0.220 Sum_probs=82.2
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhh-----------------HHHHHHHHHHHHccCCCCccceeEEEEe
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFER-----------------LKDLESQVKAIAKLKHPNLVKLRGFYWE 546 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~-----------------~~~f~~e~~~l~~l~H~niv~l~g~~~~ 546 (586)
.+.||+|+||.||+|.. +|..||||.+....... .+.|.+|++++.+++||||+++++++..
T Consensus 36 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 114 (348)
T 2pml_X 36 IRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITN 114 (348)
T ss_dssp EEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEES
T ss_pred EEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEee
Confidence 45799999999999999 89999999996542211 1779999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHH------HhccCCCCCccHHhhcccc
Q 043706 547 DEEKLLIHDYVSNGCLASF------SFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 547 ~~~~~lv~ey~~~GsL~~~------L~~~~~~~~l~w~~r~~~~ 584 (586)
.+..++||||+++|+|.++ +... ....+++..+.+++
T Consensus 115 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~ 157 (348)
T 2pml_X 115 YDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCII 157 (348)
T ss_dssp SSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHH
T ss_pred CCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHH
Confidence 9999999999999999998 4432 23457777666553
No 287
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.08 E-value=1.3e-10 Score=115.34 Aligned_cols=97 Identities=20% Similarity=0.300 Sum_probs=78.5
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchh-------hHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFE-------RLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~-------~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 555 (586)
.+.||+|+||.||+|+. .+++.||+|++...... ..++|.+|++++.+++||||+++++++.... ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 45799999999999998 57999999999654221 1167999999999999999999999986554 69999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+++|+|.+++.... ..++|..+.+|+
T Consensus 102 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~ 128 (287)
T 4f0f_A 102 FVPCGDLYHRLLDKA--HPIKWSVKLRLM 128 (287)
T ss_dssp CCTTCBHHHHHHCTT--SCCCHHHHHHHH
T ss_pred ecCCCCHHHHHhccc--CCccHHHHHHHH
Confidence 999999999997652 347777665553
No 288
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.08 E-value=2.2e-10 Score=114.05 Aligned_cols=95 Identities=19% Similarity=0.205 Sum_probs=76.8
Q ss_pred ceeecCCceEEEEEEe---CCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 485 YILCTSSSSIVYKAVL---ADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~---~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
+.||+|+||.||+|.. .++..||||.++... ....++|.+|++++..++||||+++++++ ..+..++||||+++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 3799999999999965 357899999997543 23357799999999999999999999999 66778999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.+|
T Consensus 102 ~~L~~~l~~~---~~~~~~~~~~i 122 (291)
T 1xbb_A 102 GPLNKYLQQN---RHVKDKNIIEL 122 (291)
T ss_dssp EEHHHHHHHC---TTCCHHHHHHH
T ss_pred CCHHHHHHhC---cCCCHHHHHHH
Confidence 9999999864 23566655544
No 289
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.08 E-value=3.1e-10 Score=112.76 Aligned_cols=97 Identities=18% Similarity=0.154 Sum_probs=82.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++.+++||||+++++++...+..++|+||+++|
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 468999999999999985 79999999996542 334578999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++... ..+++..+.++
T Consensus 107 ~L~~~l~~~---~~~~~~~~~~i 126 (287)
T 2wei_A 107 ELFDEIIKR---KRFSEHDAARI 126 (287)
T ss_dssp BHHHHHHHH---SSCCHHHHHHH
T ss_pred CHHHHHHhc---CCCCHHHHHHH
Confidence 999998764 23566655544
No 290
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.08 E-value=1.5e-10 Score=116.99 Aligned_cols=99 Identities=16% Similarity=0.254 Sum_probs=72.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch-hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF-ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~-~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|... +|+.||+|+++.... ...+.+.+|++++.+++||||+++++++...+..++||||++ |+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 346999999999999974 799999999975432 234678999999999999999999999999999999999999 69
Q ss_pred HHHHHhccC---CCCCccHHhhccc
Q 043706 562 LASFSFTHA---SKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~---~~~~l~w~~r~~~ 583 (586)
|.+++.... ....+++..+..|
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~ 113 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYF 113 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHH
T ss_pred HHHHHHhccccccccCCCHHHHHHH
Confidence 999997641 1234666655443
No 291
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.08 E-value=1.2e-10 Score=122.68 Aligned_cols=96 Identities=20% Similarity=0.303 Sum_probs=76.6
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch--------hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF--------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 554 (586)
.+.||+|+||.||+|.. .+|+.||||++..... .....|.+|++++.+++|||||++++++. .+..++||
T Consensus 140 ~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv~ 218 (419)
T 3i6u_A 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVL 218 (419)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEEE
T ss_pred EeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEEE
Confidence 46899999999999997 4789999999965421 11234889999999999999999999975 55689999
Q ss_pred eccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 555 DYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|||++|+|.+++... ..+++..+.+|
T Consensus 219 e~~~~g~L~~~l~~~---~~~~~~~~~~i 244 (419)
T 3i6u_A 219 ELMEGGELFDKVVGN---KRLKEATCKLY 244 (419)
T ss_dssp ECCTTCBGGGGTSSS---CCCCHHHHHHH
T ss_pred EcCCCCcHHHHHhcc---CCCCHHHHHHH
Confidence 999999999988754 34666655544
No 292
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.07 E-value=2.3e-10 Score=114.21 Aligned_cols=95 Identities=22% Similarity=0.264 Sum_probs=77.3
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEe-------------CCe
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWE-------------DEE 549 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-------------~~~ 549 (586)
.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++.+++||||++++++|.. .+.
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (303)
T 1zy4_A 11 IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKST 89 (303)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEE
T ss_pred hheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCc
Confidence 45799999999999997 479999999996533 334779999999999999999999999865 346
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccHHhhc
Q 043706 550 KLLIHDYVSNGCLASFSFTHASKFHLFFAIIH 581 (586)
Q Consensus 550 ~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~ 581 (586)
.++||||+++|+|.++++... ..+++..+.
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~ 119 (303)
T 1zy4_A 90 LFIQMEYCENGTLYDLIHSEN--LNQQRDEYW 119 (303)
T ss_dssp EEEEEECCCSCBHHHHHHHSC--GGGCHHHHH
T ss_pred eEEEEecCCCCCHHHhhhccc--cccchHHHH
Confidence 789999999999999998642 234444443
No 293
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.07 E-value=2e-10 Score=117.46 Aligned_cols=93 Identities=14% Similarity=0.212 Sum_probs=76.9
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+.. +|+.||||.++.... .+.+|++++.++ +||||+++++++...+..++||||+++|+
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~ 102 (342)
T 2qr7_A 27 KEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102 (342)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCc
Confidence 468999999999999984 799999999975533 245688888887 79999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.+++... ..+++..+.+|
T Consensus 103 L~~~i~~~---~~~~~~~~~~~ 121 (342)
T 2qr7_A 103 LLDKILRQ---KFFSEREASAV 121 (342)
T ss_dssp HHHHHHTC---TTCCHHHHHHH
T ss_pred HHHHHHHc---CCCCHHHHHHH
Confidence 99999764 23556554444
No 294
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.07 E-value=7.7e-11 Score=119.16 Aligned_cols=100 Identities=16% Similarity=0.240 Sum_probs=81.7
Q ss_pred cceeecCCceEEEEEEeC------CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA------DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~------~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|+.. ++..||||.+.... .....+|.+|++++.+++|+||+++++++...+..++||||
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 109 (322)
T 1p4o_A 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMEL 109 (322)
T ss_dssp EEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEe
Confidence 467999999999999863 37899999997543 34456799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhccC-------CCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHA-------SKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~-------~~~~l~w~~r~~~ 583 (586)
+++|+|.++++... ....+++..+.++
T Consensus 110 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i 143 (322)
T 1p4o_A 110 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143 (322)
T ss_dssp CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHH
T ss_pred CCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHH
Confidence 99999999998631 1134566665554
No 295
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.07 E-value=2.3e-10 Score=113.54 Aligned_cols=97 Identities=15% Similarity=0.195 Sum_probs=80.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 19 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 98 (284)
T 2vgo_A 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPR 98 (284)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCC
Confidence 457999999999999984 68899999996542 22346799999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.+|
T Consensus 99 ~~L~~~l~~~---~~~~~~~~~~~ 119 (284)
T 2vgo_A 99 GELYKELQKH---GRFDEQRSATF 119 (284)
T ss_dssp EEHHHHHHHH---SSCCHHHHHHH
T ss_pred CcHHHHHHhc---CCCCHHHHHHH
Confidence 9999999865 23555554443
No 296
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.07 E-value=3.6e-10 Score=116.61 Aligned_cols=97 Identities=19% Similarity=0.236 Sum_probs=80.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch--------hhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEE
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF--------ERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLI 553 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~--------~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv 553 (586)
.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+.++.++ +||||+++++++...+..++|
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 178 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEE
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEE
Confidence 478999999999999985 799999999965421 1135688999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 554 HDYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 554 ~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|||+++|+|.+++... ..+++..+..+
T Consensus 179 ~e~~~g~~L~~~l~~~---~~l~~~~~~~i 205 (365)
T 2y7j_A 179 FDLMRKGELFDYLTEK---VALSEKETRSI 205 (365)
T ss_dssp ECCCTTCBHHHHHHHH---SSCCHHHHHHH
T ss_pred EEeCCCCcHHHHHHhc---CCCCHHHHHHH
Confidence 9999999999999764 24666655444
No 297
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.07 E-value=2.4e-10 Score=115.88 Aligned_cols=101 Identities=23% Similarity=0.340 Sum_probs=80.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEE--EEEEeccc-chhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTL--AVRRIGET-CFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~v--avK~l~~~-~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+|+.. +|..+ |+|+++.. .....+.|.+|++++.++ +||||+++++++...+..++||||++
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 109 (327)
T 1fvr_A 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 109 (327)
T ss_dssp EEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred eeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCC
Confidence 468999999999999974 66654 99998754 233446799999999999 99999999999999999999999999
Q ss_pred CCCHHHHHhccC-------------CCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHA-------------SKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~-------------~~~~l~w~~r~~~~ 584 (586)
+|+|.+++.... ....+++..+.+|+
T Consensus 110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 148 (327)
T 1fvr_A 110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148 (327)
T ss_dssp TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHH
T ss_pred CCCHHHHHHhcccccccccccccccccccCCHHHHHHHH
Confidence 999999998652 12357777666554
No 298
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.07 E-value=1.5e-10 Score=117.71 Aligned_cols=86 Identities=26% Similarity=0.303 Sum_probs=74.8
Q ss_pred cceeecCCceEEEEEEeC-CC-----cEEEEEEecccc-hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVLA-DG-----TTLAVRRIGETC-FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g-----~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~e 555 (586)
.+.||+|+||.||+|... +| ..||+|.++... ....+.+.+|++++.++ +||||++++++|...+..++|||
T Consensus 51 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 130 (333)
T 2i1m_A 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130 (333)
T ss_dssp EEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEe
Confidence 468999999999999873 23 489999997653 34457799999999999 89999999999999999999999
Q ss_pred ccCCCCHHHHHhcc
Q 043706 556 YVSNGCLASFSFTH 569 (586)
Q Consensus 556 y~~~GsL~~~L~~~ 569 (586)
|+++|+|.+++...
T Consensus 131 ~~~~g~L~~~l~~~ 144 (333)
T 2i1m_A 131 YCCYGDLLNFLRRK 144 (333)
T ss_dssp CCTTEEHHHHHHHH
T ss_pred cCCCCcHHHHHHHh
Confidence 99999999999864
No 299
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.07 E-value=1.1e-10 Score=120.95 Aligned_cols=98 Identities=18% Similarity=0.312 Sum_probs=78.7
Q ss_pred cceeecCCceEEEEEEeC--CC--cEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEe-CCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLA--DG--TTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWE-DEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~--~g--~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|... ++ ..||||.++.. .....++|.+|+.++.+++||||++++++|.. .+..++||||+
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 457999999999999873 32 46899999754 33455789999999999999999999999865 45789999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
++|+|.+++... ...++|..+.+|
T Consensus 174 ~~g~L~~~l~~~--~~~~~~~~~~~i 197 (373)
T 3c1x_A 174 KHGDLRNFIRNE--THNPTVKDLIGF 197 (373)
T ss_dssp TTCBHHHHHHCT--TCCCBHHHHHHH
T ss_pred CCCCHHHHHhhc--ccCCCHHHHHHH
Confidence 999999999764 234566665554
No 300
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.06 E-value=3.4e-10 Score=113.13 Aligned_cols=93 Identities=15% Similarity=0.116 Sum_probs=74.4
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHc--cCCCCccceeEEEEeC----CeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAK--LKHPNLVKLRGFYWED----EEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~----~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+. +|+.||||++.... .+.+..|.+++.. ++||||+++++++... ...++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 45799999999999998 68999999997543 3456667777666 8999999999998653 3578999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.++++.. .++|..+.+|+
T Consensus 89 ~~g~L~~~l~~~----~~~~~~~~~i~ 111 (301)
T 3q4u_A 89 EMGSLYDYLQLT----TLDTVSCLRIV 111 (301)
T ss_dssp TTCBHHHHHTTC----CBCHHHHHHHH
T ss_pred cCCCHHHHHhhc----ccCHHHHHHHH
Confidence 999999999643 46777665553
No 301
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.06 E-value=2.4e-10 Score=114.14 Aligned_cols=99 Identities=18% Similarity=0.305 Sum_probs=78.7
Q ss_pred cceeecCCceEEEEEEeCC----CcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEe-CCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLAD----GTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWE-DEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~----g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+..+ +..+|+|.+... .....++|.+|++++.+++||||++++++|.. .+..++||||+
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 4689999999999998632 236899999754 33445779999999999999999999999765 45788999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.++++.. ...+++..+.+|+
T Consensus 110 ~~~~L~~~l~~~--~~~~~~~~~~~i~ 134 (298)
T 3f66_A 110 KHGDLRNFIRNE--THNPTVKDLIGFG 134 (298)
T ss_dssp TTCBHHHHHHCT--TCCCCHHHHHHHH
T ss_pred CCCCHHHHHHhc--ccCCCHHHHHHHH
Confidence 999999999764 2345666655543
No 302
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.06 E-value=2.2e-10 Score=116.37 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=82.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccC-CCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLK-HPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|... +|+.||+|++.... ....+++.+|+.++.+++ ||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 468999999999999984 79999999997543 233578999999999994 69999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++... ....+++..+.+|+
T Consensus 114 ~~L~~~~~~~-~~~~~~~~~~~~i~ 137 (327)
T 3lm5_A 114 GEIFSLCLPE-LAEMVSENDVIRLI 137 (327)
T ss_dssp EEGGGGGSSC-C-CCCCHHHHHHHH
T ss_pred CcHHHHHHHh-cccCCCHHHHHHHH
Confidence 9999998654 23457777666554
No 303
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.06 E-value=3.8e-12 Score=140.12 Aligned_cols=181 Identities=13% Similarity=0.091 Sum_probs=124.7
Q ss_pred CCceEEEEcCCCCCcccCc-cccCCCCCCCEEEccCCCCCCC-CCccccCCCCCcEEEeeC---------CCCCCCCccc
Q 043706 87 MFRVISLILPNSQLLGSVT-KDLGLIQHLRHLDLSNNFFNGS-LPLSIFSATELQVLSLSN---------NAISGELPDL 155 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~-~~l~~l~~L~~L~Ls~N~l~g~-~p~~~~~l~~L~~L~Ls~---------N~l~~~~p~~ 155 (586)
+.+++.|+|++|.+.+... ..+..+++|+.|+|++| +... ++.....+++|++|+|+. |.+++.....
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 3678888888888765433 33567888888888887 4322 222233578888888843 4555333333
Q ss_pred cC-CCCCCcEEEccCCCCCCCCchhcC-CCCCCcEEecc--c----ccCCcCC--------CCCCCCCcEEecccCCCCC
Q 043706 156 IG-QIPRLQLLNLSVNALAGKVPRNLT-AVKSLTVVSLR--S----NYFSGSI--------PSGFTSVEVLDLSSNLFNG 219 (586)
Q Consensus 156 ~~-~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~--~----N~l~g~~--------p~~l~~L~~L~Ls~N~l~~ 219 (586)
+. .+++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++.. ...+++|+.|+|++ .+++
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 33 478899998888888876666665 58889999998 4 5555221 12347899999976 6665
Q ss_pred cCCcCCCC--CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCcccC
Q 043706 220 SLPLDFGG--GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLTGAI 269 (586)
Q Consensus 220 ~~p~~~~~--~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~i 269 (586)
..+..+.. ++|+.|+|++|.+++.....+...+++|+.|+|++|.+++..
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~ 497 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKA 497 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHH
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHH
Confidence 54444443 789999999999987766666555899999999999986543
No 304
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.06 E-value=2e-10 Score=114.22 Aligned_cols=96 Identities=20% Similarity=0.185 Sum_probs=79.2
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEecccch--hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIGETCF--ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
+.||+|+||.||+|...+|+.||+|++..... ...+.+.+|++++.+++||||+++++++...+..++||||+++ +|
T Consensus 8 ~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l 86 (288)
T 1ob3_A 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL 86 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EH
T ss_pred hhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CH
Confidence 57999999999999988899999999965432 2336789999999999999999999999999999999999985 99
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++.... ..+++..+.++
T Consensus 87 ~~~~~~~~--~~~~~~~~~~~ 105 (288)
T 1ob3_A 87 KKLLDVCE--GGLESVTAKSF 105 (288)
T ss_dssp HHHHHTST--TCCCHHHHHHH
T ss_pred HHHHHhcc--cCCCHHHHHHH
Confidence 99987642 23555544433
No 305
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.05 E-value=2.1e-10 Score=117.77 Aligned_cols=96 Identities=15% Similarity=0.071 Sum_probs=79.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
..+||+|+||.||+++.. +|+.||+|+++... ....+.+..|.+++..+ +||||+++++++...+..++||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 457999999999999985 58999999997542 23346788999999988 89999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
+|+|.+++... ..+++..+..
T Consensus 105 gg~L~~~l~~~---~~~~~~~~~~ 125 (353)
T 2i0e_A 105 GGDLMYHIQQV---GRFKEPHAVF 125 (353)
T ss_dssp SCBHHHHHHHH---SSCCHHHHHH
T ss_pred CCcHHHHHHhc---CCCCHHHHHH
Confidence 99999999864 2355554433
No 306
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.05 E-value=2.9e-10 Score=115.52 Aligned_cols=98 Identities=18% Similarity=0.233 Sum_probs=81.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
...||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++.+++||||++++++|...+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 458999999999999984 69999999986543 233466889999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCccHHhhcccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|.+++... ..+++..+.+|+
T Consensus 110 ~l~~~~~~~---~~~~~~~~~~~~ 130 (331)
T 4aaa_A 110 ILDDLELFP---NGLDYQVVQKYL 130 (331)
T ss_dssp HHHHHHHST---TCCCHHHHHHHH
T ss_pred hHHHHHhhc---cCCCHHHHHHHH
Confidence 999987644 236666665543
No 307
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.05 E-value=2.5e-10 Score=114.90 Aligned_cols=86 Identities=22% Similarity=0.263 Sum_probs=73.8
Q ss_pred cceeecCCceEEEEEEe------CCCcEEEEEEecccc-hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCC-eEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL------ADGTTLAVRRIGETC-FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDE-EKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~------~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~-~~~lv~ 554 (586)
.+.||+|+||.||+|+. .+++.||||.++... ....+.+.+|++++.++ +||||++++++|...+ ..++||
T Consensus 32 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~ 111 (316)
T 2xir_A 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 111 (316)
T ss_dssp EEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEE
T ss_pred eeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEE
Confidence 46899999999999984 356899999997653 33456799999999999 7999999999998755 589999
Q ss_pred eccCCCCHHHHHhcc
Q 043706 555 DYVSNGCLASFSFTH 569 (586)
Q Consensus 555 ey~~~GsL~~~L~~~ 569 (586)
||+++|+|.+++...
T Consensus 112 e~~~~~~L~~~l~~~ 126 (316)
T 2xir_A 112 EFCKFGNLSTYLRSK 126 (316)
T ss_dssp ECCTTEEHHHHHHTC
T ss_pred EcCCCCcHHHHHHhc
Confidence 999999999999875
No 308
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.05 E-value=3.8e-10 Score=112.47 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=77.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|... +|+.||||+++... ....+.+.+|++++.+++||||+++++++...+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 357999999999999984 79999999996542 33347789999999999999999999999999999999999986
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+.+.... ..+++..+.+|
T Consensus 86 ~l~~~~~~~~--~~l~~~~~~~~ 106 (292)
T 3o0g_A 86 DLKKYFDSCN--GDLDPEIVKSF 106 (292)
T ss_dssp EHHHHHHHTT--TCCCHHHHHHH
T ss_pred CHHHHHHhCC--CCCCHHHHHHH
Confidence 6666655432 23666655444
No 309
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.05 E-value=4.8e-10 Score=112.86 Aligned_cols=96 Identities=19% Similarity=0.315 Sum_probs=76.7
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||+|... +|+.||+|.+..... .+++.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTSC--CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchHH--HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 457999999999999985 699999999975432 36789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++.... ..+++..+.++
T Consensus 112 ~~~~~~~~--~~~~~~~~~~i 130 (314)
T 3com_A 112 SDIIRLRN--KTLTEDEIATI 130 (314)
T ss_dssp HHHHHHHT--CCCCHHHHHHH
T ss_pred HHHHHhcC--CCCCHHHHHHH
Confidence 99997432 23566555444
No 310
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.05 E-value=3.1e-10 Score=114.25 Aligned_cols=101 Identities=18% Similarity=0.299 Sum_probs=77.5
Q ss_pred cceeecCCceEEEEEEeC----CCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCC-----eEEE
Q 043706 484 AYILCTSSSSIVYKAVLA----DGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE-----EKLL 552 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~----~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~l 552 (586)
.+.||+|+||.||+|... .+..||+|.++.. .....+.|.+|++++.+++||||+++++++...+ ..++
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 118 (313)
T 3brb_A 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV 118 (313)
T ss_dssp EEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEE
T ss_pred ccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEE
Confidence 467999999999999873 3558999999754 3344577999999999999999999999998755 3599
Q ss_pred EEeccCCCCHHHHHhcc---CCCCCccHHhhcccc
Q 043706 553 IHDYVSNGCLASFSFTH---ASKFHLFFAIIHPFG 584 (586)
Q Consensus 553 v~ey~~~GsL~~~L~~~---~~~~~l~w~~r~~~~ 584 (586)
||||+++|+|.+++... .....+++..+.+|+
T Consensus 119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~ 153 (313)
T 3brb_A 119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153 (313)
T ss_dssp EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHH
T ss_pred EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHH
Confidence 99999999999999653 233567777766654
No 311
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.04 E-value=2.3e-10 Score=116.25 Aligned_cols=100 Identities=23% Similarity=0.247 Sum_probs=81.8
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccC-CCCccceeEEEEe--------CCeEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLK-HPNLVKLRGFYWE--------DEEKLLI 553 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~--------~~~~~lv 553 (586)
.+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.++.++. ||||+++++++.. ....++|
T Consensus 33 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv 112 (337)
T 3ll6_A 33 RRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLL 112 (337)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEE
T ss_pred EEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEE
Confidence 46899999999999997 479999999997666666678999999999996 9999999999953 2347899
Q ss_pred EeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 554 HDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 554 ~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+||+. |+|.+++........++|..+.+|+
T Consensus 113 ~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~ 142 (337)
T 3ll6_A 113 TELCK-GQLVEFLKKMESRGPLSCDTVLKIF 142 (337)
T ss_dssp EECCS-EEHHHHHHHHHTTCSCCHHHHHHHH
T ss_pred EEecC-CCHHHHHHHhhccCCCCHHHHHHHH
Confidence 99996 7999999764333457887766554
No 312
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.04 E-value=3.7e-10 Score=111.42 Aligned_cols=97 Identities=18% Similarity=0.225 Sum_probs=71.0
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++.+++||||+++++++...+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 35799999999999987 579999999997542 233467999999999999999999999999999999999999 7
Q ss_pred CCHHHHHhccCCCCCccHHhhcccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|.+++... ..+++..+.+|+
T Consensus 97 ~~l~~~~~~~---~~~~~~~~~~~~ 118 (275)
T 2eue_A 97 NELFDYIVQR---DKMSEQEARRFF 118 (275)
T ss_dssp EEHHHHHHTS---SSCCHHHHHHHH
T ss_pred CcHHHHHHhc---CCCCHHHHHHHH
Confidence 7888888764 246666655543
No 313
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.04 E-value=2.6e-10 Score=119.24 Aligned_cols=94 Identities=12% Similarity=0.094 Sum_probs=75.1
Q ss_pred ceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHH-ccCCCCccceeEEEEe----CCeEEEEEeccC
Q 043706 485 YILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIA-KLKHPNLVKLRGFYWE----DEEKLLIHDYVS 558 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~-~l~H~niv~l~g~~~~----~~~~~lv~ey~~ 558 (586)
++||+|+||.||++... +|..||||+++.. ..+.+|++++. ..+|+||+++++++.. .+..++|||||+
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 57999999999999984 7999999999632 35678888874 4589999999999876 557899999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|+|.++|+.. ....++|..+.+|+
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~ 167 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIM 167 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHH
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHH
Confidence 99999999865 23457777665554
No 314
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.04 E-value=2.6e-10 Score=115.90 Aligned_cols=96 Identities=21% Similarity=0.276 Sum_probs=77.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch--hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF--ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++.+++||||+++++++...+..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 45799999999999987 4799999999975532 224568899999999999999999999999999999999998 5
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++... ..+++..+.+|
T Consensus 118 ~L~~~~~~~---~~~~~~~~~~i 137 (329)
T 3gbz_A 118 DLKKYMDKN---PDVSMRVIKSF 137 (329)
T ss_dssp EHHHHHHHC---TTCCHHHHHHH
T ss_pred CHHHHHhhc---CCCCHHHHHHH
Confidence 999999765 23566655444
No 315
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.04 E-value=1.1e-10 Score=116.72 Aligned_cols=101 Identities=17% Similarity=0.213 Sum_probs=68.3
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|.. .+|..||||++.... ....+++.+|++++.+++||||+++++++...+..++||||+++|+
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 99 (303)
T 2vwi_A 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99 (303)
T ss_dssp EEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCB
T ss_pred hheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCc
Confidence 45799999999999987 478999999997543 2334678999999999999999999999999999999999999999
Q ss_pred HHHHHhcc-----CCCCCccHHhhcccc
Q 043706 562 LASFSFTH-----ASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~-----~~~~~l~w~~r~~~~ 584 (586)
|.+++... .....+++..+.+++
T Consensus 100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~ 127 (303)
T 2vwi_A 100 VLDIIKHIVAKGEHKSGVLDESTIATIL 127 (303)
T ss_dssp HHHHHHHHHHTTTTTTCSSCHHHHHHHH
T ss_pred hHHHHHHHhhccccccCCCCHHHHHHHH
Confidence 99999752 123457777665543
No 316
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.03 E-value=3.5e-10 Score=114.43 Aligned_cols=95 Identities=18% Similarity=0.278 Sum_probs=74.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch--------hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF--------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~--------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 554 (586)
.+.||+|+||.||+|... +|+.||||.+..... .....|.+|++++.+++||||+++++++...+ .++||
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~ 93 (322)
T 2ycf_A 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVL 93 (322)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEE
T ss_pred eeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEE
Confidence 467999999999999984 689999999965421 12245889999999999999999999987654 89999
Q ss_pred eccCCCCHHHHHhccCCCCCccHHhhcc
Q 043706 555 DYVSNGCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
||+++|+|.+++... ..+++....+
T Consensus 94 e~~~~~~L~~~~~~~---~~~~~~~~~~ 118 (322)
T 2ycf_A 94 ELMEGGELFDKVVGN---KRLKEATCKL 118 (322)
T ss_dssp ECCTTEETHHHHSTT---CCCCHHHHHH
T ss_pred ecCCCCcHHHHHhcc---CCCCHHHHHH
Confidence 999999999998754 2355554443
No 317
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.02 E-value=4.9e-10 Score=112.10 Aligned_cols=95 Identities=12% Similarity=0.106 Sum_probs=77.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHH-HccCCCCccceeEEEEe----CCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAI-AKLKHPNLVKLRGFYWE----DEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l-~~l~H~niv~l~g~~~~----~~~~~lv~ey~ 557 (586)
.++||+|+||.||++.. .+|+.||+|+++.. ..+.+|+.++ ...+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 35799999999999998 57999999999642 4577888887 56699999999999987 56789999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.+++... ....+++..+.+|+
T Consensus 98 ~~~~L~~~l~~~-~~~~~~~~~~~~i~ 123 (299)
T 3m2w_A 98 DGGELFSRIQDR-GDQAFTEREASEIM 123 (299)
T ss_dssp CSCBHHHHHHHC-TTCCCBHHHHHHHH
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHH
Confidence 999999999875 22357777666554
No 318
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.02 E-value=3.1e-10 Score=115.26 Aligned_cols=96 Identities=5% Similarity=-0.068 Sum_probs=80.0
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+. .+|+.||||.+..... .+++.+|++++.++ +|+||+++++++...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 45799999999999997 5799999999865432 24588999999999 9999999999999999999999999 999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.+++... ...+++..+.+|+
T Consensus 91 L~~~~~~~--~~~~~~~~~~~i~ 111 (330)
T 2izr_A 91 LEDLFDLC--DRTFSLKTVLMIA 111 (330)
T ss_dssp HHHHHHHT--TTCCCHHHHHHHH
T ss_pred HHHHHHHc--CCCCCHHHHHHHH
Confidence 99999864 2347777666554
No 319
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.02 E-value=6.6e-10 Score=113.23 Aligned_cols=93 Identities=14% Similarity=0.174 Sum_probs=78.3
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHc--cCCCCccceeEEEEeCC----eEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAK--LKHPNLVKLRGFYWEDE----EKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~~----~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+. +|+.||||.+.... .+++.+|++++.. ++||||+++++++...+ ..++||||+
T Consensus 47 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~ 122 (342)
T 1b6c_B 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 122 (342)
T ss_dssp EEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCC
T ss_pred EeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeec
Confidence 56899999999999998 58999999996543 3568889988887 79999999999998876 789999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.+++... .++|..+.+|+
T Consensus 123 ~~g~L~~~l~~~----~~~~~~~~~i~ 145 (342)
T 1b6c_B 123 EHGSLFDYLNRY----TVTVEGMIKLA 145 (342)
T ss_dssp TTCBHHHHHHHC----CBCHHHHHHHH
T ss_pred CCCcHHHHHhcc----CccHHHHHHHH
Confidence 999999999753 36676665553
No 320
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.02 E-value=5.7e-10 Score=112.95 Aligned_cols=96 Identities=17% Similarity=0.264 Sum_probs=78.4
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHcc-CCCCccceeEEEEe------CCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKL-KHPNLVKLRGFYWE------DEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~------~~~~~lv~e 555 (586)
.+.||+|+||.||+|.. .+|+.||||++...... .+++.+|+.++.++ +||||+++++++.. .+..++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST-THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc-HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 46799999999999998 57999999999754332 36799999999999 89999999999987 467899999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIH 581 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~ 581 (586)
|+++|+|.+++.... ...+++..+.
T Consensus 108 ~~~~~~L~~~l~~~~-~~~~~~~~~~ 132 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTK-GNTLKEEWIA 132 (326)
T ss_dssp CCTTEEHHHHHHHSG-GGCCCHHHHH
T ss_pred cCCCCcHHHHHHhcc-cCCCCHHHHH
Confidence 999999999998641 2235554443
No 321
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.01 E-value=2.4e-10 Score=117.50 Aligned_cols=97 Identities=15% Similarity=0.206 Sum_probs=79.6
Q ss_pred cceeecCCceEEEEEEe----CCCcEEEEEEecccc----hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL----ADGTTLAVRRIGETC----FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~----~~g~~vavK~l~~~~----~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 554 (586)
.+.||+|+||.||+++. .+|+.||||+++... ....+.+.+|++++.++ +|+||+++++++...+..++||
T Consensus 59 ~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 138 (355)
T 1vzo_A 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLIL 138 (355)
T ss_dssp EEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEe
Confidence 46799999999999987 378999999997542 12335678899999999 6999999999999999999999
Q ss_pred eccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 555 DYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
||+++|+|.+++... ..+++..+..|
T Consensus 139 e~~~~~~L~~~l~~~---~~~~~~~~~~~ 164 (355)
T 1vzo_A 139 DYINGGELFTHLSQR---ERFTEHEVQIY 164 (355)
T ss_dssp CCCCSCBHHHHHHHH---SCCCHHHHHHH
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHH
Confidence 999999999999865 23555554443
No 322
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.01 E-value=8.2e-10 Score=113.52 Aligned_cols=97 Identities=12% Similarity=0.111 Sum_probs=80.0
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccC-----CCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLK-----HPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-----H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+..|++++.+++ |+||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC
Confidence 45799999999999998 578999999997533 23366888999999987 999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|+|.+++.... ...+++..+.+|
T Consensus 119 -~~~L~~~~~~~~-~~~~~~~~~~~i 142 (360)
T 3llt_A 119 -GPSLYEIITRNN-YNGFHIEDIKLY 142 (360)
T ss_dssp -CCBHHHHHHHTT-TCCCCHHHHHHH
T ss_pred -CCCHHHHHHhcC-CCCCCHHHHHHH
Confidence 999999998652 223666655444
No 323
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.01 E-value=6.4e-10 Score=113.66 Aligned_cols=96 Identities=13% Similarity=0.145 Sum_probs=80.6
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCC--CCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKH--PNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||++...+++.||||++... .....+.|.+|++++.+++| +||+++++++...+..++||| +.+
T Consensus 14 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 92 (343)
T 3dbq_A 14 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 92 (343)
T ss_dssp EEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCC
Confidence 3579999999999999888999999999654 33445779999999999987 999999999999999999999 568
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.+|
T Consensus 93 ~~L~~~l~~~---~~~~~~~~~~i 113 (343)
T 3dbq_A 93 IDLNSWLKKK---KSIDPWERKSY 113 (343)
T ss_dssp EEHHHHHHHS---CCCCHHHHHHH
T ss_pred CCHHHHHHhc---CCCCHHHHHHH
Confidence 8999999865 34666655544
No 324
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.01 E-value=1.8e-10 Score=113.93 Aligned_cols=96 Identities=19% Similarity=0.282 Sum_probs=76.8
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeC-CeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWED-EEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~ey~~~GsL 562 (586)
.+.||+|+||.||++.. .|..||||.++... ..+.|.+|++++.+++||||+++++++... +..++||||+++|+|
T Consensus 26 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L 102 (278)
T 1byg_A 26 LQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 102 (278)
T ss_dssp EEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEH
T ss_pred EeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCH
Confidence 45799999999999988 48899999997543 346799999999999999999999998665 478999999999999
Q ss_pred HHHHhccCCCCCccHHhhccc
Q 043706 563 ASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 563 ~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+++... ....+++..+.+|
T Consensus 103 ~~~l~~~-~~~~~~~~~~~~~ 122 (278)
T 1byg_A 103 VDYLRSR-GRSVLGGDCLLKF 122 (278)
T ss_dssp HHHHHHH-HHHHCCHHHHHHH
T ss_pred HHHHHhc-ccccCCHHHHHHH
Confidence 9999764 1223555554443
No 325
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.01 E-value=5.8e-10 Score=110.36 Aligned_cols=97 Identities=22% Similarity=0.291 Sum_probs=77.7
Q ss_pred cceeecCCceEEEEEEeC----CCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA----DGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+|+.. .+..||+|.++.. .....+.|.+|++++.+++||||+++++++.. +..++||||++
T Consensus 17 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 95 (281)
T 3cc6_A 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYP 95 (281)
T ss_dssp EEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred EEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCC
Confidence 457999999999999863 2346999999765 33445779999999999999999999999764 45689999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|+|.+++.... ..+++..+.+|
T Consensus 96 ~~~L~~~l~~~~--~~~~~~~~~~~ 118 (281)
T 3cc6_A 96 YGELGHYLERNK--NSLKVLTLVLY 118 (281)
T ss_dssp TCBHHHHHHHHT--TTCCHHHHHHH
T ss_pred CCCHHHHHHhcc--ccCCHHHHHHH
Confidence 999999997642 23566655544
No 326
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.00 E-value=5.4e-10 Score=112.56 Aligned_cols=95 Identities=22% Similarity=0.229 Sum_probs=73.2
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEE--------------eCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYW--------------EDE 548 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~--------------~~~ 548 (586)
.+.||+|+||.||+|... +|+.||+|++........+++.+|++++.+++||||+++++++. ..+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 357999999999999985 69999999998776666688999999999999999999999873 346
Q ss_pred eEEEEEeccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 549 EKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 549 ~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
..++||||++ |+|.+++... .+++..+.+|
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~ 125 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQG----PLLEEHARLF 125 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTTC----CCCHHHHHHH
T ss_pred ceeEEeeccC-CCHHHHhhcC----CccHHHHHHH
Confidence 7899999998 6999998643 3455544433
No 327
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.00 E-value=3.9e-11 Score=131.96 Aligned_cols=175 Identities=17% Similarity=0.138 Sum_probs=90.8
Q ss_pred CceEEEEcCCCCCcccCccccC-CCCCCCEEEccCC-CCCCC-CCccccCCCCCcEEEeeCCCCCCCCcccc----CCCC
Q 043706 88 FRVISLILPNSQLLGSVTKDLG-LIQHLRHLDLSNN-FFNGS-LPLSIFSATELQVLSLSNNAISGELPDLI----GQIP 160 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~-~l~~L~~L~Ls~N-~l~g~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~ 160 (586)
.+++.|+|++|.+.+..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4566677777666665555554 4667777777666 44322 33333456677777777766655443333 2455
Q ss_pred CCcEEEccCCC--CCCC-CchhcCCCCCCcEEecccc-cCCcCCCCC---CCCCcEEecccCC-----------------
Q 043706 161 RLQLLNLSVNA--LAGK-VPRNLTAVKSLTVVSLRSN-YFSGSIPSG---FTSVEVLDLSSNL----------------- 216 (586)
Q Consensus 161 ~L~~L~L~~N~--l~~~-~p~~l~~l~~L~~L~L~~N-~l~g~~p~~---l~~L~~L~Ls~N~----------------- 216 (586)
+|+.|+|++|. ++.. ++..+..+++|+.|+|++| .+.+ ++.. +++|+.|+++.+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 67777776665 2111 1111234566666666666 2222 2221 2455555543331
Q ss_pred ---------CCCcCCcCCC----C-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCC
Q 043706 217 ---------FNGSLPLDFG----G-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFN 263 (586)
Q Consensus 217 ---------l~~~~p~~~~----~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N 263 (586)
+.......+. . ++|++|+|++|.+++.....+...+++|+.|++++|
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 1111111111 1 567777777777654444444444667777777666
No 328
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.00 E-value=3.1e-10 Score=117.41 Aligned_cols=86 Identities=20% Similarity=0.232 Sum_probs=66.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHHHH-HHccCCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQVKA-IAKLKHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.++||+|+||.||+++.. ++..||+|+++.... ...+.+..|..+ +..++|||||++++++...+..++||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999984 689999999975532 233456777776 577899999999999999999999999999
Q ss_pred CCCHHHHHhcc
Q 043706 559 NGCLASFSFTH 569 (586)
Q Consensus 559 ~GsL~~~L~~~ 569 (586)
+|+|.+++...
T Consensus 123 gg~L~~~l~~~ 133 (373)
T 2r5t_A 123 GGELFYHLQRE 133 (373)
T ss_dssp SCBHHHHHHHH
T ss_pred CCcHHHHHHhc
Confidence 99999999864
No 329
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.00 E-value=6.5e-10 Score=111.00 Aligned_cols=98 Identities=19% Similarity=0.293 Sum_probs=77.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch--hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF--ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|+.. +|+.||||.++.... ...+.+.+|++++.+++||||+++++++...+..++||||++ |
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 357999999999999985 799999999965432 223678999999999999999999999999999999999998 6
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|.+++.... ...+++..+.++
T Consensus 87 ~L~~~~~~~~-~~~~~~~~~~~~ 108 (299)
T 2r3i_A 87 DLKKFMDASA-LTGIPLPLIKSY 108 (299)
T ss_dssp EHHHHHHHTT-TTCCCHHHHHHH
T ss_pred CHHHHHHhhh-ccCCCHHHHHHH
Confidence 9999997652 223555554443
No 330
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=98.99 E-value=6.8e-10 Score=111.67 Aligned_cols=96 Identities=14% Similarity=0.226 Sum_probs=77.3
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|... ..+|+|+++.. .....+.|.+|++++.+++|+||+++++++. .+..++||||+++|+
T Consensus 41 ~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~ 117 (307)
T 3lb7_A 41 STRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSS 117 (307)
T ss_dssp EEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCB
T ss_pred EeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCCc
Confidence 467999999999999864 35899998754 3344577999999999999999999999874 556889999999999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.++++... ..+++..+.+|+
T Consensus 118 L~~~l~~~~--~~~~~~~~~~i~ 138 (307)
T 3lb7_A 118 LYKHLHVQE--TKFQMFQLIDIA 138 (307)
T ss_dssp HHHHHHTSC--CCCCHHHHHHHH
T ss_pred HHHHHHhcc--cCCCHHHHHHHH
Confidence 999997542 346676665543
No 331
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=98.99 E-value=2.2e-10 Score=116.77 Aligned_cols=97 Identities=16% Similarity=0.197 Sum_probs=80.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch--------hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF--------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~--------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 554 (586)
.+.||+|+||.||+|+. .+|..||||+++.... ...+.|.+|++++.+++||||+++++++...+..++||
T Consensus 29 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~ 108 (335)
T 3dls_A 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108 (335)
T ss_dssp EEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred EeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEE
Confidence 46899999999999997 5799999999975431 12245788999999999999999999999999999999
Q ss_pred eccCCC-CHHHHHhccCCCCCccHHhhccc
Q 043706 555 DYVSNG-CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 555 ey~~~G-sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
||+.+| +|.+++... ..+++..+.++
T Consensus 109 e~~~~g~~l~~~~~~~---~~l~~~~~~~i 135 (335)
T 3dls_A 109 EKHGSGLDLFAFIDRH---PRLDEPLASYI 135 (335)
T ss_dssp ECCTTSCBHHHHHHTC---CCCCHHHHHHH
T ss_pred EeCCCCccHHHHHHhc---CCCCHHHHHHH
Confidence 999888 999999764 23666665544
No 332
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=98.99 E-value=9.5e-10 Score=114.55 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=80.0
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEeccc--chhhHHHHHHHHHHHHccC--CCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGET--CFERLKDLESQVKAIAKLK--HPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||++...+|+.||||++... .....++|.+|++++.+++ |+||+++++++...+..++||| +.+
T Consensus 61 ~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~ 139 (390)
T 2zmd_A 61 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 139 (390)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCS
T ss_pred EEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCC
Confidence 4579999999999999878999999999654 3344577999999999996 5999999999999999999999 578
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.+|
T Consensus 140 ~~L~~~l~~~---~~~~~~~~~~i 160 (390)
T 2zmd_A 140 IDLNSWLKKK---KSIDPWERKSY 160 (390)
T ss_dssp EEHHHHHHHC---SSCCHHHHHHH
T ss_pred CCHHHHHHhc---CCCCHHHHHHH
Confidence 8999999865 24566555443
No 333
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.99 E-value=6.8e-10 Score=113.17 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=78.8
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc-hhhHHHHHHHHHH-HHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC-FERLKDLESQVKA-IAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~f~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
...||+|+||.||+|.. .+|+.||||+++... ....+++..|+.. +..++||||+++++++...+..++||||+++
T Consensus 56 ~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~- 134 (340)
T 3an0_A 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT- 134 (340)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE-
T ss_pred eeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC-
Confidence 35799999999999997 579999999997652 2334556666665 7778999999999999999999999999985
Q ss_pred CHHHHHhcc-CCCCCccHHhhcccc
Q 043706 561 CLASFSFTH-ASKFHLFFAIIHPFG 584 (586)
Q Consensus 561 sL~~~L~~~-~~~~~l~w~~r~~~~ 584 (586)
+|.+++... .....++|..+.+|+
T Consensus 135 ~L~~~l~~~~~~~~~l~~~~~~~i~ 159 (340)
T 3an0_A 135 SLDKFYKQVIDKGQTIPEDILGKIA 159 (340)
T ss_dssp EHHHHHHHHHHTSCCCCHHHHHHHH
T ss_pred cHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 999998753 223457777665543
No 334
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=98.99 E-value=1e-09 Score=111.53 Aligned_cols=92 Identities=16% Similarity=0.149 Sum_probs=73.8
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHc--cCCCCccceeEEEEeC----CeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAK--LKHPNLVKLRGFYWED----EEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~--l~H~niv~l~g~~~~~----~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+.. |..||||++..... ..+..|.+++.. ++|+||+++++++... ...++||||+
T Consensus 42 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 117 (337)
T 3mdy_A 42 VKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYH 117 (337)
T ss_dssp EEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCC
T ss_pred EeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEecc
Confidence 568999999999999985 89999999965432 345555555555 4999999999999887 7889999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
++|+|.++++.. .+++..+.++
T Consensus 118 ~~g~L~~~l~~~----~~~~~~~~~i 139 (337)
T 3mdy_A 118 ENGSLYDYLKST----TLDAKSMLKL 139 (337)
T ss_dssp TTCBHHHHHHHC----CBCHHHHHHH
T ss_pred CCCcHHHHhhcc----CCCHHHHHHH
Confidence 999999999754 3666665544
No 335
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=98.98 E-value=7.4e-10 Score=110.89 Aligned_cols=99 Identities=12% Similarity=0.190 Sum_probs=77.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc----hhhHHHHHHHHHHHHccCCCCccceeEEEEe--CCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC----FERLKDLESQVKAIAKLKHPNLVKLRGFYWE--DEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~----~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey 556 (586)
.+.||+|+||.||++.. .+|..||+|.++... ....+.|.+|++++.+++|+||+++++++.. .+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 46799999999999998 478999999997542 2345779999999999999999999999854 4578999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++| |.+++... ....+++..+.+|+
T Consensus 90 ~~~~-l~~~~~~~-~~~~~~~~~~~~~~ 115 (305)
T 2wtk_C 90 CVCG-MQEMLDSV-PEKRFPVCQAHGYF 115 (305)
T ss_dssp CSEE-HHHHHHHS-TTCSCCHHHHHHHH
T ss_pred ccCC-HHHHHHhC-cccccCHHHHHHHH
Confidence 9987 77777654 22346676665543
No 336
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=98.98 E-value=7.6e-10 Score=109.91 Aligned_cols=100 Identities=16% Similarity=0.158 Sum_probs=76.6
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc-hhh-HHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC-FER-LKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~-~~~-~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
...||+|+||.||++.. .+|+.||||+++... ... .+.+.++...+..++||||+++++++...+..++||||++ |
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 90 (290)
T 3fme_A 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-T 90 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-E
T ss_pred HHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-c
Confidence 45799999999999997 579999999997652 222 2334555556888999999999999999999999999998 5
Q ss_pred CHHHHHhcc-CCCCCccHHhhcccc
Q 043706 561 CLASFSFTH-ASKFHLFFAIIHPFG 584 (586)
Q Consensus 561 sL~~~L~~~-~~~~~l~w~~r~~~~ 584 (586)
+|.+++... .....++|..+.+|+
T Consensus 91 ~l~~~l~~~~~~~~~~~~~~~~~i~ 115 (290)
T 3fme_A 91 SLDKFYKQVIDKGQTIPEDILGKIA 115 (290)
T ss_dssp EHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred chHHHHHHHHhcCCCCCHHHHHHHH
Confidence 998888753 233457777766554
No 337
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=98.98 E-value=5.8e-10 Score=110.98 Aligned_cols=96 Identities=15% Similarity=0.234 Sum_probs=76.3
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+.. ..+|||+++.. .....+.|.+|++++.+++|+||+++++++ ..+..++||||+++|+
T Consensus 29 ~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~ 105 (289)
T 3og7_A 29 GQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSS 105 (289)
T ss_dssp EEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEE
T ss_pred eeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCc
Confidence 457999999999999864 35999999754 334457799999999999999999999965 4566899999999999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.++++... ..++|..+.+|+
T Consensus 106 L~~~l~~~~--~~~~~~~~~~i~ 126 (289)
T 3og7_A 106 LYHHLHASE--TKFEMKKLIDIA 126 (289)
T ss_dssp HHHHHTTC-----CCHHHHHHHH
T ss_pred HHHHHhhcc--CCCCHHHHHHHH
Confidence 999997542 346676665543
No 338
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=98.98 E-value=2.2e-10 Score=116.23 Aligned_cols=98 Identities=20% Similarity=0.326 Sum_probs=76.1
Q ss_pred cceeecCCceEEEEEEe-CCCcE----EEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTT----LAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~----vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+. .+|.. ||+|.+.... ....+++.+|+.++.+++||||++++++|. .+..++|+||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 35799999999999997 35554 7888875432 223356889999999999999999999986 56688999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.+++... ...++|..+.+|+
T Consensus 97 ~~~~L~~~l~~~--~~~~~~~~~~~~~ 121 (325)
T 3kex_A 97 PLGSLLDHVRQH--RGALGPQLLLNWG 121 (325)
T ss_dssp TTCBSHHHHHSS--GGGSCTTHHHHHH
T ss_pred CCCCHHHHHHHc--cccCCHHHHHHHH
Confidence 999999999864 2346666555543
No 339
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.97 E-value=3.2e-10 Score=126.95 Aligned_cols=96 Identities=15% Similarity=0.187 Sum_probs=77.7
Q ss_pred cceeecCCceEEEEEEeC--CCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCe-----EEEEEe
Q 043706 484 AYILCTSSSSIVYKAVLA--DGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEE-----KLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~--~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~-----~~lv~e 555 (586)
...||+|+||.||+|+.. +|+.||||++... .....+.|.+|++++.+++|||||+++++|...+. .+||||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 357999999999999974 6899999999654 33445679999999999999999999999987665 799999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
||++|+|.+++.. .++|..+.+|+
T Consensus 165 ~~~g~~L~~~~~~-----~l~~~~~~~~~ 188 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-----KLPVAEAIAYL 188 (681)
T ss_dssp CCCCEECC----C-----CCCHHHHHHHH
T ss_pred eCCCCcHHHHHhC-----CCCHHHHHHHH
Confidence 9999999987754 47788777664
No 340
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=98.97 E-value=5.9e-10 Score=114.71 Aligned_cols=98 Identities=19% Similarity=0.276 Sum_probs=78.9
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccch-----------hhHHHHHHHHHHHHccCCCCccceeEEEEeCC----
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCF-----------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE---- 548 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~-----------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~---- 548 (586)
.+.||+|+||.||+|...+|..||||++..... ...+.|.+|++++.+++||||+++++++...+
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 468999999999999988899999999954321 12367999999999999999999999996533
Q ss_pred -eEEEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 549 -EKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 549 -~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
..++||||++ |+|.+++... ...+++..+.+|+
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~ 140 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFM 140 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHH
T ss_pred ceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHH
Confidence 5799999998 6999998854 2356777665554
No 341
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.97 E-value=1e-09 Score=122.01 Aligned_cols=98 Identities=17% Similarity=0.236 Sum_probs=80.0
Q ss_pred cceeecCCceEEEEEEeC----CCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA----DGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~----~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
.+.||+|+||.||+|... .+..||+|.++.. .....+.|.+|+.++.+++||||+++++++. .+..++||||++
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~ 473 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCT 473 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCC
Confidence 568999999999999873 2568999998754 3344577999999999999999999999984 567899999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|+|.++++.. ...++|..+.+|+
T Consensus 474 ~g~L~~~l~~~--~~~l~~~~~~~i~ 497 (656)
T 2j0j_A 474 LGELRSFLQVR--KFSLDLASLILYA 497 (656)
T ss_dssp TCBHHHHHHHT--TTTCCHHHHHHHH
T ss_pred CCcHHHHHHhc--cCCCCHHHHHHHH
Confidence 99999999864 2347777666553
No 342
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.96 E-value=9.7e-10 Score=116.11 Aligned_cols=97 Identities=15% Similarity=0.194 Sum_probs=79.6
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeC-----CeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWED-----EEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lv~e 555 (586)
.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++.+++|+||+++++++... +..++|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 45799999999999997 47899999999754 334457799999999999999999999999776 57899999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
||+ |+|.+++... ..+++..+..|+
T Consensus 111 ~~~-~~L~~~~~~~---~~l~~~~~~~i~ 135 (432)
T 3n9x_A 111 IAD-SDLKKLFKTP---IFLTEEHIKTIL 135 (432)
T ss_dssp CCS-EEHHHHHHSS---CCCCHHHHHHHH
T ss_pred cCC-cCHHHHHhcc---CCCCHHHHHHHH
Confidence 997 5999999754 346666555443
No 343
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.96 E-value=2e-10 Score=117.97 Aligned_cols=177 Identities=13% Similarity=0.134 Sum_probs=116.5
Q ss_pred CceEEEEcCCCCCcc-c-------CccccCCCCCCCEEEccCCCCC---------CCCCccccCCCCCcEEEeeCCCCCC
Q 043706 88 FRVISLILPNSQLLG-S-------VTKDLGLIQHLRHLDLSNNFFN---------GSLPLSIFSATELQVLSLSNNAISG 150 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~-~-------~~~~l~~l~~L~~L~Ls~N~l~---------g~~p~~~~~l~~L~~L~Ls~N~l~~ 150 (586)
.+|+.|.+......| . +..++..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 466777776655442 1 1334556788888888765432 234455567789999999887311
Q ss_pred CCccccCCCCCCcEEEccCCCCCCCCchhcC--CCCCCcEEeccc--ccCCcC---------CC-CCCCCCcEEecccCC
Q 043706 151 ELPDLIGQIPRLQLLNLSVNALAGKVPRNLT--AVKSLTVVSLRS--NYFSGS---------IP-SGFTSVEVLDLSSNL 216 (586)
Q Consensus 151 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~L~~--N~l~g~---------~p-~~l~~L~~L~Ls~N~ 216 (586)
.++. + .+++|+.|+|..+.++......++ .+++|+.|+|+. |...+. +. ..+++|+.|+|.+|.
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2333 3 378999999988887654444443 688999998853 222111 11 236899999999998
Q ss_pred CCCcCCcCCC----CCcccEEEcccCcCCCcCcHHHHh---cCCCCcEEEccCCCCcc
Q 043706 217 FNGSLPLDFG----GGNLRYLNLSYNKISGSISPEFAK---RIPQNVTIDLSFNNLTG 267 (586)
Q Consensus 217 l~~~~p~~~~----~~~L~~L~ls~N~l~g~ip~~~~~---~l~~L~~L~Ls~N~l~g 267 (586)
+++..+..+. .++|+.|+|+.|.+.+.....+.. .+++|+.|+|++|.++.
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 8754433332 278999999999998643333332 27899999999998874
No 344
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.95 E-value=9.9e-10 Score=115.00 Aligned_cols=106 Identities=24% Similarity=0.327 Sum_probs=75.1
Q ss_pred HHHHhhcccceeecCCceEEEEEEeC---CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEe--CCeE
Q 043706 476 VETLFKASAYILCTSSSSIVYKAVLA---DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWE--DEEK 550 (586)
Q Consensus 476 ~~~l~~a~~~~lg~g~~g~vy~~~~~---~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~--~~~~ 550 (586)
+++.....+..||+|+||.||+|+.. ++..||||++...... +.+.+|++++.+++|||||++++++.. ....
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC--HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC--HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 34444445678999999999999974 5789999999754332 468899999999999999999999966 5688
Q ss_pred EEEEeccCCCCHHHHHhccC------CCCCccHHhhcccc
Q 043706 551 LLIHDYVSNGCLASFSFTHA------SKFHLFFAIIHPFG 584 (586)
Q Consensus 551 ~lv~ey~~~GsL~~~L~~~~------~~~~l~w~~r~~~~ 584 (586)
++||||++ |+|.+++.... ....+++..+.+|+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 134 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLL 134 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHH
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHH
Confidence 99999997 58888886431 12346776655543
No 345
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=98.95 E-value=3.6e-10 Score=114.56 Aligned_cols=97 Identities=19% Similarity=0.197 Sum_probs=76.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhh-HHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFER-LKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~-~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|... +|+.||||++....... ...+.+|++++.+++||||+++++++...+..++||||++ |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 357999999999999985 79999999997543221 1246689999999999999999999999999999999998 59
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.+++.... ..+++..+.+|
T Consensus 86 l~~~~~~~~--~~~~~~~~~~~ 105 (324)
T 3mtl_A 86 LKQYLDDCG--NIINMHNVKLF 105 (324)
T ss_dssp HHHHHHHTT--TCCCHHHHHHH
T ss_pred HHHHHHhcC--CCCCHHHHHHH
Confidence 999988652 23566555444
No 346
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.94 E-value=2.2e-10 Score=118.75 Aligned_cols=100 Identities=12% Similarity=0.143 Sum_probs=76.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc---chhhHHHHHHHH---HHHHccCCCCcccee-------EEEEeCC-
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET---CFERLKDLESQV---KAIAKLKHPNLVKLR-------GFYWEDE- 548 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~---~~~~~~~f~~e~---~~l~~l~H~niv~l~-------g~~~~~~- 548 (586)
.+.||+|+||.||+|+. .+|+.||||++... .....+.|.+|+ +.+++++|||||+++ +++...+
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 46799999999999997 57999999999743 334457799999 566677899999998 6665543
Q ss_pred ----------------eEEEEEeccCCCCHHHHHhcc----CCCCCccHHhhcccc
Q 043706 549 ----------------EKLLIHDYVSNGCLASFSFTH----ASKFHLFFAIIHPFG 584 (586)
Q Consensus 549 ----------------~~~lv~ey~~~GsL~~~L~~~----~~~~~l~w~~r~~~~ 584 (586)
..++||||+ +|+|.+++... +....++|..+.+|+
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~ 212 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLT 212 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHH
Confidence 278999999 68999999864 112345566665543
No 347
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.93 E-value=1.3e-09 Score=110.57 Aligned_cols=98 Identities=18% Similarity=0.337 Sum_probs=77.8
Q ss_pred cceeecCCceEEEEEEe-CCCcE----EEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTT----LAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~----vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|.. .+|.. ||+|.+... .....++|.+|++++.+++||||++++++|.... .++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEec
Confidence 45799999999999997 35553 577777544 3344578999999999999999999999998754 78999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++|+|.+++.... ..+++..+.+|+
T Consensus 99 ~~g~L~~~l~~~~--~~~~~~~~~~i~ 123 (327)
T 3lzb_A 99 PFGCLLDYVREHK--DNIGSQYLLNWC 123 (327)
T ss_dssp SSCBHHHHHHHTT--TCCCHHHHHHHH
T ss_pred CCCcHHHHHHhcC--CCCCHHHHHHHH
Confidence 9999999998752 236666655543
No 348
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=98.93 E-value=2.9e-09 Score=107.94 Aligned_cols=82 Identities=18% Similarity=0.282 Sum_probs=72.3
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccC-CCCccceeEEEEe--CCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLK-HPNLVKLRGFYWE--DEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~ey~~~ 559 (586)
.+.||+|+||.||+|+. .+|+.||||+++... .+.+.+|++++.+++ |+||+++++++.. ....++||||+++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 46899999999999987 579999999997543 366999999999997 9999999999988 5678999999999
Q ss_pred CCHHHHHhc
Q 043706 560 GCLASFSFT 568 (586)
Q Consensus 560 GsL~~~L~~ 568 (586)
|+|.+++..
T Consensus 118 ~~l~~~~~~ 126 (330)
T 3nsz_A 118 TDFKQLYQT 126 (330)
T ss_dssp CCHHHHGGG
T ss_pred hhHHHHHHh
Confidence 999998753
No 349
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.93 E-value=1.9e-09 Score=109.84 Aligned_cols=96 Identities=13% Similarity=0.038 Sum_probs=73.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEe----CCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWE----DEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~ey~~ 558 (586)
.++||+|+||.||+|... +|+.||||++..... ........+..+.|+||+++++++.. ....++||||++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 109 (336)
T 3fhr_A 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME 109 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred ceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence 457999999999999985 799999999965322 11222234567799999999999976 445889999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhcccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+|+|.+++... ....+++..+.+|+
T Consensus 110 gg~L~~~l~~~-~~~~l~~~~~~~i~ 134 (336)
T 3fhr_A 110 GGELFSRIQER-GDQAFTEREAAEIM 134 (336)
T ss_dssp TEEHHHHHHTC--CCCCBHHHHHHHH
T ss_pred CCCHHHHHHhc-CCCCCCHHHHHHHH
Confidence 99999999865 23457777766654
No 350
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.93 E-value=9.2e-09 Score=107.24 Aligned_cols=166 Identities=12% Similarity=0.105 Sum_probs=85.7
Q ss_pred ceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEcc
Q 043706 89 RVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLS 168 (586)
Q Consensus 89 ~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 168 (586)
+++.+.|.++ +...-..+|.++ .|+.++|.+ .++..-+.+|.+|.+|+.++|+.|.++......|. ..+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 4666666554 444444555553 566666664 45544455666666666666666666633333343 4666666665
Q ss_pred CCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCC--CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCC----
Q 043706 169 VNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF--TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKIS---- 241 (586)
Q Consensus 169 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l--~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~---- 241 (586)
.| ++..-...|.++++|+.++|..| ++..-...| .+|+.++| .|.++......|.. .+|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~ 288 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPE 288 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcc
Confidence 33 54444455666666666666543 332222222 44555555 33344333444444 55555555555442
Q ss_pred CcCcHHHHhcCCCCcEEEcc
Q 043706 242 GSISPEFAKRIPQNVTIDLS 261 (586)
Q Consensus 242 g~ip~~~~~~l~~L~~L~Ls 261 (586)
..|+...+.++++|+.++|.
T Consensus 289 ~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 289 AMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp CEECTTTTTTCTTCCEECCC
T ss_pred cEECHHHhhCCccCCeEEeC
Confidence 12444444445555555555
No 351
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=98.92 E-value=7.8e-10 Score=113.17 Aligned_cols=96 Identities=19% Similarity=0.218 Sum_probs=74.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchh-----hHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFE-----RLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~-----~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 557 (586)
.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++.+++||||+++++++...+..++||||+
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 94 (346)
T 1ua2_A 15 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94 (346)
T ss_dssp EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcC
Confidence 457999999999999984 6999999999754221 1246889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhcc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
++ +|.+++.... ..+++..+.+
T Consensus 95 ~~-~l~~~~~~~~--~~~~~~~~~~ 116 (346)
T 1ua2_A 95 ET-DLEVIIKDNS--LVLTPSHIKA 116 (346)
T ss_dssp SE-EHHHHHTTCC--SSCCSSHHHH
T ss_pred CC-CHHHHHHhcC--cCCCHHHHHH
Confidence 96 8999887642 2345544443
No 352
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.92 E-value=1.1e-09 Score=116.75 Aligned_cols=96 Identities=16% Similarity=0.161 Sum_probs=68.7
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeC-----CeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWED-----EEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lv~e 555 (586)
.+.||+|+||.||+|... +|+.||||++... .....+.+.+|++++.+++|+|||++++++... ...++|||
T Consensus 58 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 137 (458)
T 3rp9_A 58 RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE 137 (458)
T ss_dssp CCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEC
T ss_pred eeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEe
Confidence 467999999999999874 7999999999653 334457799999999999999999999999543 56899999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+. |+|.+++... ..+++..+..|
T Consensus 138 ~~~-~~L~~~~~~~---~~l~~~~~~~~ 161 (458)
T 3rp9_A 138 IAD-SDFKKLFRTP---VYLTELHIKTL 161 (458)
T ss_dssp CCS-EEHHHHHHSS---CCCCHHHHHHH
T ss_pred ccc-cchhhhcccC---CCCCHHHHHHH
Confidence 985 7999998754 34566554443
No 353
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=98.91 E-value=1e-09 Score=113.96 Aligned_cols=95 Identities=19% Similarity=0.263 Sum_probs=73.1
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeC---------------
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWED--------------- 547 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--------------- 547 (586)
.+.||+|+||.||+|+. .+|..||||++...... +.+|++++..++|+|||++++++...
T Consensus 12 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~ 87 (383)
T 3eb0_A 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHN 87 (383)
T ss_dssp EEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC---------------
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccccccccccccc
Confidence 45799999999999987 57999999999654322 34799999999999999999998543
Q ss_pred -----------------------CeEEEEEeccCCCCHHHHHhcc-CCCCCccHHhhccc
Q 043706 548 -----------------------EEKLLIHDYVSNGCLASFSFTH-ASKFHLFFAIIHPF 583 (586)
Q Consensus 548 -----------------------~~~~lv~ey~~~GsL~~~L~~~-~~~~~l~w~~r~~~ 583 (586)
...++|||||+ |+|.+.+... .....+++..+..|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i 146 (383)
T 3eb0_A 88 KLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIY 146 (383)
T ss_dssp ----------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred cccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHH
Confidence 34789999999 5898888753 22345666655544
No 354
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.91 E-value=2.6e-09 Score=106.44 Aligned_cols=96 Identities=9% Similarity=0.063 Sum_probs=80.1
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|.. .+|+.||||.+..... .+++.+|++.+.++ +|+|++++++++......++||||+ +|+
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 45799999999999996 5799999999865432 24588999999999 8999999999999999999999999 999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.+++.... ..+++..+.+++
T Consensus 92 L~~~l~~~~--~~~~~~~~~~i~ 112 (298)
T 1csn_A 92 LEDLLDLCG--RKFSVKTVAMAA 112 (298)
T ss_dssp HHHHHHHTT--TCCCHHHHHHHH
T ss_pred HHHHHHHhc--cCCCHHHHHHHH
Confidence 999998642 246777665553
No 355
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.90 E-value=2.3e-09 Score=109.70 Aligned_cols=95 Identities=19% Similarity=0.193 Sum_probs=77.5
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeC-----CeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWED-----EEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lv~ey 556 (586)
.+.||+|+||.||+|... +|+.||||++.... .....++.+|++++.+++||||+++++++... ...++|+||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 457999999999999984 79999999997543 33456789999999999999999999998764 678999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
++ |+|.+++... .+++..+.+|
T Consensus 96 ~~-~~L~~~~~~~----~~~~~~~~~~ 117 (353)
T 2b9h_A 96 MQ-TDLHRVISTQ----MLSDDHIQYF 117 (353)
T ss_dssp CS-EEHHHHHHHC----CCCHHHHHHH
T ss_pred cC-ccHHHHHhhc----CCCHHHHHHH
Confidence 98 6999998753 3566555444
No 356
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.90 E-value=2.2e-10 Score=125.87 Aligned_cols=100 Identities=19% Similarity=0.211 Sum_probs=81.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc-chhhHHHHHHHHHHHHccCCCCccceeEEEEe------CCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET-CFERLKDLESQVKAIAKLKHPNLVKLRGFYWE------DEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~-~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~------~~~~~lv~e 555 (586)
.+.||+|+||.||+|.. .+|..||||+++.. .....+.|.+|++++.+++||||+++++++.. .+..++|||
T Consensus 19 ~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmE 98 (676)
T 3qa8_A 19 KERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98 (676)
T ss_dssp CCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEE
Confidence 45799999999999997 47999999999754 34445779999999999999999999998755 567899999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+++|+|.+++........+++..+.+|
T Consensus 99 y~~ggsL~~~L~~~~~~~~lse~~i~~I 126 (676)
T 3qa8_A 99 YCEGGDLRKYLNQFENCCGLKEGPIRTL 126 (676)
T ss_dssp CCSSCBHHHHHHSSSCTTCCCSSHHHHH
T ss_pred eCCCCCHHHHHHhcccCCCCCHHHHHHH
Confidence 9999999999987533334665554443
No 357
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.90 E-value=1.6e-10 Score=117.75 Aligned_cols=95 Identities=12% Similarity=0.155 Sum_probs=72.4
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccc--------hhhHHHHHHHHHHHHccC---------CCCccceeEEEE-
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETC--------FERLKDLESQVKAIAKLK---------HPNLVKLRGFYW- 545 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~--------~~~~~~f~~e~~~l~~l~---------H~niv~l~g~~~- 545 (586)
.+.||+|+||.||+|+. +|+.||||+++... ....+.+.+|++++.+++ |+|||++.+.+.
T Consensus 25 ~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~ 103 (336)
T 2vuw_A 25 CEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCV 103 (336)
T ss_dssp CEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEE
T ss_pred eeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEe
Confidence 46899999999999998 78999999997542 223477999999999886 888888877653
Q ss_pred -----------------------------eCCeEEEEEeccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 546 -----------------------------EDEEKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 546 -----------------------------~~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
..+..++||||+++|++.+.+.+. .+++.....|
T Consensus 104 ~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~----~~~~~~~~~i 166 (336)
T 2vuw_A 104 QGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK----LSSLATAKSI 166 (336)
T ss_dssp ESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT----CCCHHHHHHH
T ss_pred cCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc----CCCHHHHHHH
Confidence 167899999999999877776432 3455544433
No 358
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.90 E-value=1.7e-09 Score=107.31 Aligned_cols=97 Identities=21% Similarity=0.303 Sum_probs=70.5
Q ss_pred cceeecCCceEEEEEEeC--CCc--EEEEEEecccc---hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA--DGT--TLAVRRIGETC---FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~--~g~--~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|++. ++. .||||.++... ....++|.+|++++.+++||||+++++++...+ .++|+||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 457999999999999862 333 68999997542 234577999999999999999999999997655 8899999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+++|+|.+++.... ..+++..+.+|
T Consensus 102 ~~~~~L~~~l~~~~--~~~~~~~~~~~ 126 (291)
T 1u46_A 102 APLGSLLDRLRKHQ--GHFLLGTLSRY 126 (291)
T ss_dssp CTTCBHHHHHHHHG--GGSCHHHHHHH
T ss_pred ccCCCHHHHHHhcc--CCcCHHHHHHH
Confidence 99999999998642 23566655544
No 359
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.89 E-value=2.7e-09 Score=107.07 Aligned_cols=99 Identities=18% Similarity=0.143 Sum_probs=75.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch-----hhHHHHHHHHHHHHcc---CCCCccceeEEEEeCC-----e
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF-----ERLKDLESQVKAIAKL---KHPNLVKLRGFYWEDE-----E 549 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~-----~~~~~f~~e~~~l~~l---~H~niv~l~g~~~~~~-----~ 549 (586)
.+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|++++.++ +||||++++++|.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 35799999999999997 5799999999964321 1124567777777666 4999999999998765 4
Q ss_pred EEEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 550 KLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 550 ~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
.++||||+. |+|.+++... ....+++..+.+|+
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~~~~i~ 126 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKA-PPPGLPAETIKDLM 126 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTC-CTTCSCHHHHHHHH
T ss_pred EEEEehhhh-cCHHHHHhhc-cCCCCCHHHHHHHH
Confidence 789999998 6999999865 22347777666554
No 360
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.89 E-value=8.8e-10 Score=113.02 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=75.8
Q ss_pred cceeecCCceEEEEEEeC---------CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccc---------------
Q 043706 484 AYILCTSSSSIVYKAVLA---------DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVK--------------- 539 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~---------~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~--------------- 539 (586)
.+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++.+++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 457999999999999975 3889999999754 35889999999999999998
Q ss_pred eeEEEEe-CCeEEEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 540 LRGFYWE-DEEKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 540 l~g~~~~-~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+++++.. .+..++||||+ +|+|.+++... ....+++..+.+++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~ 165 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVA 165 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHH
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHH
Confidence 6788877 67889999999 99999999864 22457777766654
No 361
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.89 E-value=1.4e-09 Score=112.18 Aligned_cols=85 Identities=15% Similarity=0.212 Sum_probs=66.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCC------eEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE------EKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lv~ 554 (586)
...||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++..++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 35799999999999998 57999999999543 3334567999999999999999999999997653 459999
Q ss_pred eccCCCCHHHHHhcc
Q 043706 555 DYVSNGCLASFSFTH 569 (586)
Q Consensus 555 ey~~~GsL~~~L~~~ 569 (586)
||| +++|.+++...
T Consensus 110 e~~-~~~L~~~~~~~ 123 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHE 123 (367)
T ss_dssp ECC-SEEHHHHHHHC
T ss_pred ecC-CCCHHHHHhcC
Confidence 999 88999998753
No 362
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.89 E-value=1.5e-09 Score=120.93 Aligned_cols=97 Identities=14% Similarity=0.088 Sum_probs=80.2
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccc---hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETC---FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVS 558 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~ 558 (586)
..+||+|+||.||+++.. +|+.||||+++... ....+.+..|.+++..+ +|++|+.+++++...+..+||||||+
T Consensus 346 ~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~ 425 (674)
T 3pfq_A 346 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 425 (674)
T ss_dssp EEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCC
T ss_pred EEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcC
Confidence 458999999999999984 78999999997542 23346788999999987 79999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCccHHhhccc
Q 043706 559 NGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 559 ~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+|+|.++|+.. ..+++..+..|
T Consensus 426 gg~L~~~l~~~---~~~~~~~~~~~ 447 (674)
T 3pfq_A 426 GGDLMYHIQQV---GRFKEPHAVFY 447 (674)
T ss_dssp SCBHHHHHHHH---SSCCHHHHHHH
T ss_pred CCcHHHHHHhc---CCCCHHHHHHH
Confidence 99999999865 23556555443
No 363
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.88 E-value=2.6e-09 Score=109.34 Aligned_cols=98 Identities=17% Similarity=0.149 Sum_probs=77.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch--hhHHHHHHHHHHHHccCCCCccceeEEEEeC--------CeEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF--ERLKDLESQVKAIAKLKHPNLVKLRGFYWED--------EEKLL 552 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~--~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~--------~~~~l 552 (586)
.+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++.+++||||+++++++... +..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 45799999999999998 5799999999965432 2246788999999999999999999999873 46899
Q ss_pred EEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 553 IHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 553 v~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
||||+++ +|.+.+.... ..+++..+.+|+
T Consensus 102 v~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~ 130 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSNVL--VKFTLSEIKRVM 130 (351)
T ss_dssp EEECCSE-EHHHHHHCTT--SCCCHHHHHHHH
T ss_pred EEeccCC-CHHHHHhhcc--CCCCHHHHHHHH
Confidence 9999985 8888876542 236666655543
No 364
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=98.88 E-value=3.4e-09 Score=106.61 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=80.2
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEeccc--chhhHHHHHHHHHHHHccC--CCCccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGET--CFERLKDLESQVKAIAKLK--HPNLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
...||+|+||.||++...+|+.||||.+... .....+.|.+|++++.+++ |+||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4579999999999999888999999999654 3344577999999999997 5999999999999999999999 678
Q ss_pred CCHHHHHhccCCCCCccHHhhccc
Q 043706 560 GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 560 GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|+|.+++... ..+++..+.+|
T Consensus 112 ~~L~~~l~~~---~~~~~~~~~~i 132 (313)
T 3cek_A 112 IDLNSWLKKK---KSIDPWERKSY 132 (313)
T ss_dssp EEHHHHHHHC---SSCCHHHHHHH
T ss_pred CcHHHHHHhc---CCCCHHHHHHH
Confidence 8999999865 24566655444
No 365
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.88 E-value=3.5e-09 Score=109.40 Aligned_cols=84 Identities=11% Similarity=0.150 Sum_probs=71.1
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCC------eEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDE------EKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lv~ 554 (586)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++..++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 45799999999999987 47999999999653 3344567899999999999999999999997654 789999
Q ss_pred eccCCCCHHHHHhc
Q 043706 555 DYVSNGCLASFSFT 568 (586)
Q Consensus 555 ey~~~GsL~~~L~~ 568 (586)
||+++ +|.+++..
T Consensus 110 e~~~~-~l~~~~~~ 122 (371)
T 2xrw_A 110 ELMDA-NLCQVIQM 122 (371)
T ss_dssp ECCSE-EHHHHHHS
T ss_pred EcCCC-CHHHHHhh
Confidence 99985 78888864
No 366
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.88 E-value=3.3e-09 Score=109.27 Aligned_cols=95 Identities=15% Similarity=0.195 Sum_probs=77.4
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc-hhhHHHHHHHHHHHHccCCCCccceeEEEEeC-----CeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC-FERLKDLESQVKAIAKLKHPNLVKLRGFYWED-----EEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~-----~~~~lv~ey 556 (586)
.+.||+|+||.||++.. .+|..||||++.... ....+.+.+|++++.+++||||+++++++... ...++|+||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 45799999999999987 478999999997543 33447799999999999999999999999765 368999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
++ |+|.+++... .+++..+.+|
T Consensus 112 ~~-~~L~~~l~~~----~~~~~~~~~i 133 (364)
T 3qyz_A 112 ME-TDLYKLLKTQ----HLSNDHICYF 133 (364)
T ss_dssp CS-EEHHHHHHHC----CCCHHHHHHH
T ss_pred cC-cCHHHHHHhC----CCCHHHHHHH
Confidence 98 5999998754 3566655444
No 367
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.88 E-value=7.2e-10 Score=111.50 Aligned_cols=98 Identities=15% Similarity=0.131 Sum_probs=74.7
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch------hhHHHHHHHHHHHHcc----CCCCccceeEEEEeCCeEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF------ERLKDLESQVKAIAKL----KHPNLVKLRGFYWEDEEKLL 552 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~f~~e~~~l~~l----~H~niv~l~g~~~~~~~~~l 552 (586)
.+.||+|+||.||+|+. .+|+.||||+++.... .....+..|++++.++ +|+||+++++++...+..++
T Consensus 36 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~ 115 (312)
T 2iwi_A 36 GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFML 115 (312)
T ss_dssp EEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEE
T ss_pred eeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEE
Confidence 46799999999999987 5789999999965432 1223467899999998 89999999999999999999
Q ss_pred EEec-cCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 553 IHDY-VSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 553 v~ey-~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+|| +.+|+|.+++... ..+++..+.+++
T Consensus 116 v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~ 145 (312)
T 2iwi_A 116 VLERPLPAQDLFDYITEK---GPLGEGPSRCFF 145 (312)
T ss_dssp EEECCSSEEEHHHHHHHH---CSCCHHHHHHHH
T ss_pred EEEecCCCCCHHHHHHhc---CCCCHHHHHHHH
Confidence 9999 8999999999865 246676665543
No 368
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.87 E-value=2.2e-09 Score=114.36 Aligned_cols=93 Identities=12% Similarity=0.148 Sum_probs=73.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeC------CeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWED------EEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lv~ 554 (586)
.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|++++..++|||||++++++... ...++||
T Consensus 67 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 146 (464)
T 3ttj_A 67 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 146 (464)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEE
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEE
Confidence 45799999999999987 47999999999754 334457799999999999999999999999654 3579999
Q ss_pred eccCCCCHHHHHhccCCCCCccHHhhcc
Q 043706 555 DYVSNGCLASFSFTHASKFHLFFAIIHP 582 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~~~~l~w~~r~~ 582 (586)
|||+++ |.+.+... +++..+..
T Consensus 147 E~~~~~-l~~~~~~~-----l~~~~~~~ 168 (464)
T 3ttj_A 147 ELMDAN-LCQVIQME-----LDHERMSY 168 (464)
T ss_dssp ECCSEE-HHHHHTSC-----CCHHHHHH
T ss_pred eCCCCC-HHHHHhhc-----CCHHHHHH
Confidence 999875 66666532 55554433
No 369
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.87 E-value=3.3e-09 Score=110.29 Aligned_cols=85 Identities=21% Similarity=0.302 Sum_probs=64.8
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccC-CCCccceeEEEEeCC--eEEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLK-HPNLVKLRGFYWEDE--EKLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~--~~~lv~ey~ 557 (586)
...||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++.++. |+||+++++++...+ ..++|||||
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 35799999999999987 57999999999643 3344567889999999997 999999999998654 689999999
Q ss_pred CCCCHHHHHhcc
Q 043706 558 SNGCLASFSFTH 569 (586)
Q Consensus 558 ~~GsL~~~L~~~ 569 (586)
+ |+|.+++...
T Consensus 94 ~-~~L~~~~~~~ 104 (388)
T 3oz6_A 94 E-TDLHAVIRAN 104 (388)
T ss_dssp S-EEHHHHHHHT
T ss_pred C-cCHHHHHHcC
Confidence 8 6999998753
No 370
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.87 E-value=6.1e-09 Score=105.45 Aligned_cols=99 Identities=17% Similarity=0.175 Sum_probs=76.5
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccc-hhhHHHHHHHHH-HHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETC-FERLKDLESQVK-AIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~-~~~~~~f~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|.. .+|+.||||+++... ....+++..|+. ++..++||||+++++++...+..++||||+++
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~- 105 (327)
T 3aln_A 27 LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST- 105 (327)
T ss_dssp -CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-
T ss_pred hheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-
Confidence 45799999999999998 479999999997653 333456666766 67778999999999999999999999999995
Q ss_pred CHHHHHhcc--CCCCCccHHhhccc
Q 043706 561 CLASFSFTH--ASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~--~~~~~l~w~~r~~~ 583 (586)
+|.+++... .....+++..+.++
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~i 130 (327)
T 3aln_A 106 SFDKFYKYVYSVLDDVIPEEILGKI 130 (327)
T ss_dssp EHHHHHHHHHHTTCCCCCHHHHHHH
T ss_pred ChHHHHHHHHhhhcccCcHHHHHHH
Confidence 888887642 12334666655444
No 371
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.87 E-value=2.3e-09 Score=110.40 Aligned_cols=98 Identities=12% Similarity=0.018 Sum_probs=75.2
Q ss_pred cceeecCCceEEEEEEeCC------CcEEEEEEecccchhh-----------HHHHHHHHHHHHccCCCCccceeEEEEe
Q 043706 484 AYILCTSSSSIVYKAVLAD------GTTLAVRRIGETCFER-----------LKDLESQVKAIAKLKHPNLVKLRGFYWE 546 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~------g~~vavK~l~~~~~~~-----------~~~f~~e~~~l~~l~H~niv~l~g~~~~ 546 (586)
.+.||+|+||.||+|.... +..||||++....... ...+..|+..+..++|+||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4579999999999998843 4789999986543211 1235566777888899999999999977
Q ss_pred C----CeEEEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 547 D----EEKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 547 ~----~~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
. ...++||||+ +|+|.+++... ...++|..+.+|+
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~ 158 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLS 158 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHH
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHH
Confidence 4 4589999999 99999999864 2357888777664
No 372
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.86 E-value=6.3e-09 Score=109.75 Aligned_cols=98 Identities=10% Similarity=0.079 Sum_probs=79.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHcc------CCCCccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKL------KHPNLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l------~H~niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|... +|+.||||+++.... ..+++.+|++++..+ .|+||+++++++...+..++||||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR-FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCccc-hHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 457999999999999874 689999999975432 236688888888877 577999999999999999999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
+. |+|.+++... ....++|..+.+|+
T Consensus 181 ~~-~~L~~~l~~~-~~~~~~~~~~~~i~ 206 (429)
T 3kvw_A 181 LS-MNLYELIKKN-KFQGFSLPLVRKFA 206 (429)
T ss_dssp CC-CBHHHHHHHT-TTCCCCHHHHHHHH
T ss_pred cC-CCHHHHHHhc-cCCCCCHHHHHHHH
Confidence 96 6999999875 22347777665554
No 373
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.86 E-value=3e-09 Score=109.89 Aligned_cols=94 Identities=12% Similarity=0.129 Sum_probs=76.4
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeE------EEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEK------LLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~------~lv~ 554 (586)
.+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+.++..++||||+++++++...+.. ++||
T Consensus 47 ~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 126 (371)
T 4exu_A 47 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 126 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEE
T ss_pred EeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEE
Confidence 46799999999999997 47999999999754 333357799999999999999999999999877654 9999
Q ss_pred eccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 555 DYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
||+. |+|.+++... +++..+.+|
T Consensus 127 e~~~-~~l~~~~~~~-----~~~~~~~~i 149 (371)
T 4exu_A 127 PFMQ-TDLQKIMGME-----FSEEKIQYL 149 (371)
T ss_dssp ECCC-EEHHHHTTSC-----CCHHHHHHH
T ss_pred cccc-ccHHHHhhcC-----CCHHHHHHH
Confidence 9998 6888877432 556555444
No 374
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.85 E-value=4.1e-09 Score=107.07 Aligned_cols=92 Identities=18% Similarity=0.217 Sum_probs=69.0
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHH--HHccCCCCccceeEEEEe-----CCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKA--IAKLKHPNLVKLRGFYWE-----DEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~--l~~l~H~niv~l~g~~~~-----~~~~~lv~ey 556 (586)
.+.||+|+||.||+|+. +|+.||||++..... +.+..|.++ +..++|+||+++++++.. ....++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 45799999999999987 689999999975433 334444444 556899999999987654 2256899999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+++|+|.+++... ..+|..+.++
T Consensus 94 ~~~g~L~~~l~~~----~~~~~~~~~i 116 (336)
T 3g2f_A 94 YPNGSLXKYLSLH----TSDWVSSCRL 116 (336)
T ss_dssp CTTCBHHHHHHHC----CBCHHHHHHH
T ss_pred CCCCcHHHHHhhc----ccchhHHHHH
Confidence 9999999999764 2255554443
No 375
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.85 E-value=1.5e-09 Score=110.97 Aligned_cols=97 Identities=10% Similarity=0.003 Sum_probs=72.8
Q ss_pred cceeecCCceEEEEEEeC----CCcEEEEEEecccchh-----------hHHHHHHHHHHHHccCCCCccceeEEEEe--
Q 043706 484 AYILCTSSSSIVYKAVLA----DGTTLAVRRIGETCFE-----------RLKDLESQVKAIAKLKHPNLVKLRGFYWE-- 546 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~----~g~~vavK~l~~~~~~-----------~~~~f~~e~~~l~~l~H~niv~l~g~~~~-- 546 (586)
.+.||+|+||.||+|... ++..+|+|++...... ..+.+.+|+..+..++|+||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 467999999999999984 5789999999654211 12357788999999999999999999988
Q ss_pred --CCeEEEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 547 --DEEKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 547 --~~~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
....++||||+ +|+|.+++... ..+++..+.+|+
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~ 157 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLG 157 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHH
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHH
Confidence 67899999999 99999998764 257777766654
No 376
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.84 E-value=2.8e-09 Score=107.72 Aligned_cols=98 Identities=17% Similarity=0.158 Sum_probs=74.2
Q ss_pred cceeecCCceEEEEEEe--CCCcEEEEEEecccch--hhHHHHHHHHHHHHcc---CCCCccceeEEEE-----eCCeEE
Q 043706 484 AYILCTSSSSIVYKAVL--ADGTTLAVRRIGETCF--ERLKDLESQVKAIAKL---KHPNLVKLRGFYW-----EDEEKL 551 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~--~~g~~vavK~l~~~~~--~~~~~f~~e~~~l~~l---~H~niv~l~g~~~-----~~~~~~ 551 (586)
.+.||+|+||.||+|.. .+|+.||+|+++.... .....+.+|+.++..+ +||||++++++|. .....+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 95 (326)
T 1blx_A 16 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 95 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEE
T ss_pred eeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEE
Confidence 45799999999999997 4689999999964422 1123466777776665 8999999999997 445788
Q ss_pred EEEeccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 552 LIHDYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 552 lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+||||++ |+|.+++.... ...+++..+.++
T Consensus 96 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~ 125 (326)
T 1blx_A 96 LVFEHVD-QDLTTYLDKVP-EPGVPTETIKDM 125 (326)
T ss_dssp EEEECCS-CBHHHHHHHSC-TTCSCHHHHHHH
T ss_pred EEEecCC-CCHHHHHHhcc-cCCCCHHHHHHH
Confidence 9999998 69999998652 223666665544
No 377
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.82 E-value=6.8e-09 Score=109.66 Aligned_cols=82 Identities=18% Similarity=0.110 Sum_probs=70.9
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.++||+|+||+||.+...+|+.||||++.... .+.+.+|++++.++ +|||||++++++...+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 46799999999987666679999999986533 35678999999886 89999999999999999999999995 799
Q ss_pred HHHHhcc
Q 043706 563 ASFSFTH 569 (586)
Q Consensus 563 ~~~L~~~ 569 (586)
.+++...
T Consensus 96 ~~~l~~~ 102 (434)
T 2rio_A 96 QDLVESK 102 (434)
T ss_dssp HHHHHTC
T ss_pred HHHHhcc
Confidence 9999865
No 378
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.82 E-value=2.4e-08 Score=104.04 Aligned_cols=191 Identities=15% Similarity=0.171 Sum_probs=139.0
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEc
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNL 167 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 167 (586)
.+++.+.|.+ .+...-...|.++.+|+.++|++|.++. ++.....+.+|+.+.|..+ ++..-...|.++++|+.++|
T Consensus 157 ~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~-I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 157 STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK-LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE-ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE-echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 4688899986 6777777889999999999999999984 4444444789999999854 77666778899999999999
Q ss_pred cCCCCCCCCchhcCCCCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCC-----CcCCcCCCC-CcccEEEcccC
Q 043706 168 SVNALAGKVPRNLTAVKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFN-----GSLPLDFGG-GNLRYLNLSYN 238 (586)
Q Consensus 168 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~-----~~~p~~~~~-~~L~~L~ls~N 238 (586)
..| ++..-...|.+ .+|+.+.| .|.++..-...| .+|+.+++.+|.+. ...+..|.. .+|+.++|. |
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~ 309 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-E 309 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-T
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-C
Confidence 875 55444556666 78999998 445554434444 78899999888776 234445555 789999998 4
Q ss_pred cCCCcCcHHHHhcCCCCcEEEccCCCCcccCCCCCcCcccccccccCCc
Q 043706 239 KISGSISPEFAKRIPQNVTIDLSFNNLTGAIPGALPLVNQRMESFSGNV 287 (586)
Q Consensus 239 ~l~g~ip~~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~n~ 287 (586)
.++ .|+...+.++++|+.|+|..| ++..-+..+....+..+.+.+|.
T Consensus 310 ~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 310 SIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp TCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSS
T ss_pred ceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCC
Confidence 466 677766666899999999655 66555555554456666666653
No 379
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.82 E-value=5.7e-09 Score=105.82 Aligned_cols=98 Identities=11% Similarity=0.152 Sum_probs=79.2
Q ss_pred cceeecCCceEEEEEEe--CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCC------ccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL--ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPN------LVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~--~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~n------iv~l~g~~~~~~~~~lv~e 555 (586)
.+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++..++|++ ++++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 45799999999999986 368999999997543 23467889999999887765 9999999999999999999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+ +|+|.+++... ....+++..+.+|+
T Consensus 98 ~~-~~~l~~~l~~~-~~~~~~~~~~~~~~ 124 (339)
T 1z57_A 98 LL-GLSTYDFIKEN-GFLPFRLDHIRKMA 124 (339)
T ss_dssp CC-CCBHHHHHHHT-TTCCCCHHHHHHHH
T ss_pred CC-CCCHHHHHHhc-CCCCCcHHHHHHHH
Confidence 99 89999999865 22346666555543
No 380
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.82 E-value=3.4e-09 Score=108.62 Aligned_cols=94 Identities=12% Similarity=0.123 Sum_probs=75.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeCCe------EEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEE------KLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~------~~lv~ 554 (586)
...||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++..++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 45799999999999997 47999999999654 23335679999999999999999999999987654 49999
Q ss_pred eccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 555 DYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
||++ |+|.+++... +++..+.++
T Consensus 109 e~~~-~~l~~~~~~~-----~~~~~~~~i 131 (353)
T 3coi_A 109 PFMQ-TDLQKIMGLK-----FSEEKIQYL 131 (353)
T ss_dssp ECCS-EEGGGTTTSC-----CCHHHHHHH
T ss_pred cccc-CCHHHHhcCC-----CCHHHHHHH
Confidence 9998 6888876432 555554443
No 381
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=98.82 E-value=5.3e-10 Score=112.73 Aligned_cols=96 Identities=18% Similarity=0.163 Sum_probs=78.2
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|.... .+|+|.++... ....+.|.+|+.++.+++|+||+++++++...+..++|+||+++|+
T Consensus 38 ~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~ 115 (319)
T 2y4i_B 38 GELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT 115 (319)
T ss_dssp CCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEE
T ss_pred eeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCc
Confidence 5689999999999998743 49999996542 2223568899999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCccHHhhccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~ 583 (586)
|.+++.... ..+++..+.++
T Consensus 116 L~~~l~~~~--~~~~~~~~~~i 135 (319)
T 2y4i_B 116 LYSVVRDAK--IVLDVNKTRQI 135 (319)
T ss_dssp HHHHTTSSC--CCCCSHHHHHH
T ss_pred HHHHHHhcC--CCCCHHHHHHH
Confidence 999997642 34566555544
No 382
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.81 E-value=5.1e-09 Score=108.80 Aligned_cols=98 Identities=8% Similarity=0.049 Sum_probs=76.0
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccC--------CCCccceeEEEE----eCCeE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLK--------HPNLVKLRGFYW----EDEEK 550 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~--------H~niv~l~g~~~----~~~~~ 550 (586)
.+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++.+++ |+||+++++++. .....
T Consensus 42 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~ 120 (397)
T 1wak_A 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120 (397)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEE
T ss_pred EEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceE
Confidence 45799999999999987 578999999997543 23467899999999986 788999999987 34578
Q ss_pred EEEEeccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 551 LLIHDYVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 551 ~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
++||||+ +|+|.+++... ....+++..+.+++
T Consensus 121 ~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~ 152 (397)
T 1wak_A 121 CMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKII 152 (397)
T ss_dssp EEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHH
T ss_pred EEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHH
Confidence 9999999 66777777654 22346666655543
No 383
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.81 E-value=4.3e-09 Score=108.02 Aligned_cols=95 Identities=16% Similarity=0.203 Sum_probs=61.5
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCe-------EEEEEe
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEE-------KLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~-------~~lv~e 555 (586)
.+.||+|+||.||+|+. .+|..||||++...... .+.+.+|++.+..++||||+++++++...+. .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 46899999999999998 47999999998654322 2457788889999999999999999976443 789999
Q ss_pred ccCCCCHHHHHhcc-CCCCCccHHhh
Q 043706 556 YVSNGCLASFSFTH-ASKFHLFFAII 580 (586)
Q Consensus 556 y~~~GsL~~~L~~~-~~~~~l~w~~r 580 (586)
|+++ +|.+.+... .....+++..+
T Consensus 107 ~~~~-~l~~~~~~~~~~~~~~~~~~~ 131 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYRRQVAPPPILI 131 (360)
T ss_dssp CCSC-BHHHHHHHHHTTTCCCCHHHH
T ss_pred cccc-cHHHHHHHHhhcccCCCHHHH
Confidence 9996 555555432 22334444443
No 384
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.80 E-value=3.1e-09 Score=109.71 Aligned_cols=95 Identities=14% Similarity=0.181 Sum_probs=69.2
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEeccc--chhhHHHHHHHHHHHHccCCCCccceeEEEEeC------CeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGET--CFERLKDLESQVKAIAKLKHPNLVKLRGFYWED------EEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~--~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~------~~~~lv~ 554 (586)
.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++..++||||+++++++... ...++|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 45799999999999987 57999999999653 334457789999999999999999999999754 5679999
Q ss_pred eccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 555 DYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 555 ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
||+ +++|.+++... .+++..+..|
T Consensus 114 e~~-~~~L~~~~~~~----~l~~~~~~~i 137 (367)
T 2fst_X 114 HLM-GADLNNIVKCQ----KLTDDHVQFL 137 (367)
T ss_dssp ECC-CEECC-----C----CCCHHHHHHH
T ss_pred ccc-CCCHHHHHhcC----CCCHHHHHHH
Confidence 999 68999988642 3666555444
No 385
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.80 E-value=3.3e-09 Score=111.61 Aligned_cols=95 Identities=22% Similarity=0.351 Sum_probs=71.6
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeC----C--eEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWED----E--EKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~----~--~~~lv~ey 556 (586)
.++||+|+||.||+|+.. +|+.||||++..... .+.+|++++.+++|+|||+++++|... + +.++||||
T Consensus 59 ~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~ 134 (420)
T 1j1b_A 59 TKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY 134 (420)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred eeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence 467999999999999984 699999999965432 234799999999999999999998652 2 36799999
Q ss_pred cCCCCHHHHHhcc-CCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTH-ASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~-~~~~~l~w~~r~~~ 583 (586)
+++ +|.+.+... .....+++..+.+|
T Consensus 135 ~~~-~l~~~~~~~~~~~~~l~~~~~~~~ 161 (420)
T 1j1b_A 135 VPE-TVYRVARHYSRAKQTLPVIYVKLY 161 (420)
T ss_dssp CCE-EHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred ccc-cHHHHHHHHhhccCCCCHHHHHHH
Confidence 996 677666542 22345666655444
No 386
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.78 E-value=1.4e-08 Score=101.09 Aligned_cols=96 Identities=9% Similarity=0.051 Sum_probs=77.1
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEE-EeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFY-WEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+. .+|+.||||++...... +++.+|++++.+++|+++++.+.+| ...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 45799999999999997 58999999998654332 4689999999999999988887777 4567789999999 999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.+++.... ..+++..+.+++
T Consensus 91 L~~~~~~~~--~~~~~~~~~~i~ 111 (296)
T 3uzp_A 91 LEDLFNFCS--RKFSLKTVLLLA 111 (296)
T ss_dssp HHHHHHHTT--TCCCHHHHHHHH
T ss_pred HHHHHHhhc--cCCCHHHHHHHH
Confidence 999997542 246676665543
No 387
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.77 E-value=6.9e-09 Score=109.51 Aligned_cols=82 Identities=16% Similarity=0.259 Sum_probs=69.4
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.++||+|+||.||.....+|+.||||++...... .+.+|++++..+ +|||||++++++...+..++|||||+ |+|
T Consensus 29 ~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L 104 (432)
T 3p23_A 29 KDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATL 104 (432)
T ss_dssp EEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEH
T ss_pred CCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCH
Confidence 5689999999965544557999999999754332 256899999999 89999999999999999999999997 699
Q ss_pred HHHHhcc
Q 043706 563 ASFSFTH 569 (586)
Q Consensus 563 ~~~L~~~ 569 (586)
.+++...
T Consensus 105 ~~~l~~~ 111 (432)
T 3p23_A 105 QEYVEQK 111 (432)
T ss_dssp HHHHHSS
T ss_pred HHHHHhc
Confidence 9999865
No 388
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.76 E-value=6.5e-09 Score=108.34 Aligned_cols=96 Identities=18% Similarity=0.355 Sum_probs=70.0
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEEEeCCe------EEEEEecc
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEE------KLLIHDYV 557 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~------~~lv~ey~ 557 (586)
.++||+|+||.||+|+...+..+|+|++...... ..+|++++..++||||++++++|...+. .++||||+
T Consensus 45 ~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 45 CKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred eEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 4689999999999999976667999988544321 2469999999999999999999976443 78999999
Q ss_pred CCCCHHHHHhccCCCCCccHHhhccc
Q 043706 558 SNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 558 ~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
+++.+....+.......+++..+..|
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~~~ 146 (394)
T 4e7w_A 121 PETVYRASRHYAKLKQTMPMLLIKLY 146 (394)
T ss_dssp SEEHHHHHHHHHHTTSCCCHHHHHHH
T ss_pred CccHHHHHHHHHhhcCCCCHHHHHHH
Confidence 98655444332222334555554443
No 389
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.76 E-value=2.3e-09 Score=109.94 Aligned_cols=173 Identities=16% Similarity=0.208 Sum_probs=118.1
Q ss_pred CCceEEEEcCCCCCc---------ccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccC
Q 043706 87 MFRVISLILPNSQLL---------GSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIG 157 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~---------~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 157 (586)
+++++.|.+.++... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+.
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 357888888665431 234455678899999999988311 2333 3 388999999999988754444443
Q ss_pred --CCCCCcEEEccC--CCCCCC-----Cchhc--CCCCCCcEEecccccCCcCCC------CCCCCCcEEecccCCCCCc
Q 043706 158 --QIPRLQLLNLSV--NALAGK-----VPRNL--TAVKSLTVVSLRSNYFSGSIP------SGFTSVEVLDLSSNLFNGS 220 (586)
Q Consensus 158 --~l~~L~~L~L~~--N~l~~~-----~p~~l--~~l~~L~~L~L~~N~l~g~~p------~~l~~L~~L~Ls~N~l~~~ 220 (586)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|.+|.+.+..+ ..+++|+.|+|+.|.|++.
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 799999999864 322222 11123 357999999999999875332 2468999999999999875
Q ss_pred CCcCC----CC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCC
Q 043706 221 LPLDF----GG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNN 264 (586)
Q Consensus 221 ~p~~~----~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 264 (586)
.+..+ .. ++|+.|+|++|.++...-..+...+ ...+|++.|+
T Consensus 295 G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 295 GARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 33322 22 7899999999998754433444322 3568888876
No 390
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.74 E-value=1.6e-08 Score=100.45 Aligned_cols=96 Identities=9% Similarity=0.051 Sum_probs=75.8
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCccceeEEE-EeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLVKLRGFY-WEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+. .+|+.||||.+...... +++.+|++++..++|++++..+++| ...+..++||||+ +|+
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 4hgt_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred eeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCC
Confidence 45799999999999997 57999999987554322 3588999999999999988888777 5567889999999 999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.+++.... ..+++..+.+|+
T Consensus 91 L~~~~~~~~--~~~~~~~~~~i~ 111 (296)
T 4hgt_A 91 LEDLFNFCS--RKFSLKTVLLLA 111 (296)
T ss_dssp HHHHHHHTT--SCCCHHHHHHHH
T ss_pred HHHHHHHhc--CCCCHHHHHHHH
Confidence 999998542 246777666554
No 391
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.73 E-value=1e-08 Score=105.59 Aligned_cols=97 Identities=11% Similarity=0.132 Sum_probs=77.4
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccC-----------CCCccceeEEEEeCC---
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLK-----------HPNLVKLRGFYWEDE--- 548 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-----------H~niv~l~g~~~~~~--- 548 (586)
.+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++.+++ |+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV-YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCHH-HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCcc-chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 45799999999999997 5799999999975432 3467889999999886 899999999998654
Q ss_pred -eEEEEEeccCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 549 -EKLLIHDYVSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 549 -~~~lv~ey~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
..++||||+ +|+|.+++.... ...+++..+.++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i 136 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQI 136 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHH
T ss_pred ceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHH
Confidence 788999999 999999998642 223666655444
No 392
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.73 E-value=1.4e-08 Score=102.06 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=65.8
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch-hh-HHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF-ER-LKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~-~~-~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.||+|+||.||+|... +|+.||||.+..... .. .+.+..+..++..++||||+++++++...+..++||||+ ++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 108 (318)
T 2dyl_A 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GT 108 (318)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SE
T ss_pred cceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CC
Confidence 457999999999999984 799999999975532 22 233455556788899999999999999999999999999 44
Q ss_pred CHHHHHhccCCCCCccHHhhccc
Q 043706 561 CLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 561 sL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
.+..+..... ..+++..+.++
T Consensus 109 ~~~~l~~~~~--~~~~~~~~~~~ 129 (318)
T 2dyl_A 109 CAEKLKKRMQ--GPIPERILGKM 129 (318)
T ss_dssp EHHHHHHHHT--SCCCHHHHHHH
T ss_pred cHHHHHHHhc--cCCCHHHHHHH
Confidence 5555444322 23555554443
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.73 E-value=3.4e-10 Score=110.47 Aligned_cols=66 Identities=32% Similarity=0.491 Sum_probs=39.2
Q ss_pred CCCCCcEEEeeCCCCCC--CCccccCCCCCCcEEEccCCCCCCCCchhcCCCC--CCcEEecccccCCcCCC
Q 043706 134 SATELQVLSLSNNAISG--ELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVK--SLTVVSLRSNYFSGSIP 201 (586)
Q Consensus 134 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~--~L~~L~L~~N~l~g~~p 201 (586)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 45666777777777665 3445556666677777777766653 2222222 66666666666665544
No 394
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.70 E-value=2.9e-08 Score=102.92 Aligned_cols=97 Identities=15% Similarity=0.151 Sum_probs=77.1
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccC-CC-----CccceeEEEEeCCeEEEEEec
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLK-HP-----NLVKLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-H~-----niv~l~g~~~~~~~~~lv~ey 556 (586)
.+.||+|+||.||+|... +|+.||||+++... ...+++..|++++..++ |+ +|+++++++...+..++||||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 137 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEec
Confidence 457999999999999974 78999999997543 23466888998888885 55 399999999999999999999
Q ss_pred cCCCCHHHHHhccCCCCCccHHhhccc
Q 043706 557 VSNGCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 557 ~~~GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
++ |+|.+++.... ...++|..+.++
T Consensus 138 ~~-~~L~~~l~~~~-~~~~~~~~~~~i 162 (382)
T 2vx3_A 138 LS-YNLYDLLRNTN-FRGVSLNLTRKF 162 (382)
T ss_dssp CC-CBHHHHHHHTT-TSCCCHHHHHHH
T ss_pred CC-CCHHHHHhhcC-cCCCCHHHHHHH
Confidence 96 59999998752 234667665544
No 395
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.69 E-value=8.1e-09 Score=104.30 Aligned_cols=97 Identities=14% Similarity=0.204 Sum_probs=78.3
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch------hhHHHHHHHHHHHHccC--CCCccceeEEEEeCCeEEEEE
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF------ERLKDLESQVKAIAKLK--HPNLVKLRGFYWEDEEKLLIH 554 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~------~~~~~f~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~ 554 (586)
.+.||+|+||.||+|+. .+|+.||||.+..... ...+.+..|+.++.+++ |+||+++++++...+..++|+
T Consensus 48 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~ 127 (320)
T 3a99_A 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLIL 127 (320)
T ss_dssp EEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEE
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEE
Confidence 45799999999999987 5799999999965422 12245778999999996 599999999999999999999
Q ss_pred eccCC-CCHHHHHhccCCCCCccHHhhccc
Q 043706 555 DYVSN-GCLASFSFTHASKFHLFFAIIHPF 583 (586)
Q Consensus 555 ey~~~-GsL~~~L~~~~~~~~l~w~~r~~~ 583 (586)
||+.+ |+|.+++... ..+++..+.+|
T Consensus 128 e~~~~~~~L~~~l~~~---~~l~~~~~~~i 154 (320)
T 3a99_A 128 ERPEPVQDLFDFITER---GALQEELARSF 154 (320)
T ss_dssp ECCSSEEEHHHHHHHH---CSCCHHHHHHH
T ss_pred EcCCCCccHHHHHhcc---CCCCHHHHHHH
Confidence 99986 9999999864 23555555444
No 396
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=98.68 E-value=2e-08 Score=108.88 Aligned_cols=84 Identities=7% Similarity=0.052 Sum_probs=64.7
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccch--------hhHHHHHHHHHHHHccCCCCccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCF--------ERLKDLESQVKAIAKLKHPNLVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~--------~~~~~f~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 555 (586)
.++||+|+||.||+|.. .+..+|+|+...... ...+.|.+|++++.+++||||+++..++...+..+||||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 56899999999999965 578899998743211 113558999999999999999988888888888999999
Q ss_pred ccCCCCHHHHHhc
Q 043706 556 YVSNGCLASFSFT 568 (586)
Q Consensus 556 y~~~GsL~~~L~~ 568 (586)
||++|+|.++++.
T Consensus 420 ~~~ggsL~~~l~~ 432 (540)
T 3en9_A 420 YINGKLAKDVIED 432 (540)
T ss_dssp CCCSEEHHHHSTT
T ss_pred CCCCCCHHHHHHH
Confidence 9999999998875
No 397
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.68 E-value=2.9e-08 Score=101.31 Aligned_cols=98 Identities=9% Similarity=0.080 Sum_probs=77.7
Q ss_pred cceeecCCceEEEEEEeC-CC-cEEEEEEecccchhhHHHHHHHHHHHHccCCCC------ccceeEEEEeCCeEEEEEe
Q 043706 484 AYILCTSSSSIVYKAVLA-DG-TTLAVRRIGETCFERLKDLESQVKAIAKLKHPN------LVKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g-~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~n------iv~l~g~~~~~~~~~lv~e 555 (586)
.+.||+|+||.||+|... ++ ..||+|+++... ...+.+.+|++++.+++|++ ++.+++++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 457999999999999873 44 799999997543 23467889999999998877 8999999999999999999
Q ss_pred ccCCCCHHHHHhccCCCCCccHHhhcccc
Q 043706 556 YVSNGCLASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 556 y~~~GsL~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|+ +|+|.+++... ....+++..+.+|+
T Consensus 103 ~~-~~~l~~~l~~~-~~~~~~~~~~~~i~ 129 (355)
T 2eu9_A 103 LL-GKNTFEFLKEN-NFQPYPLPHVRHMA 129 (355)
T ss_dssp CC-CCBHHHHHHHT-TTCCCCHHHHHHHH
T ss_pred cc-CCChHHHHHhc-cCCCCCHHHHHHHH
Confidence 99 67788887765 22346777665553
No 398
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.67 E-value=3.7e-08 Score=105.25 Aligned_cols=96 Identities=14% Similarity=0.095 Sum_probs=75.5
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCC-ccceeEEEEeCCeEEEEEeccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPN-LVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~n-iv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
.+.||+|+||.||+|+. .+|..||||++...... +++..|++++..++|++ +..+..++...+..+|||||+ +|+
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~s 88 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPS 88 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCC
Confidence 45799999999999997 57999999988654332 35889999999998754 555556667788899999999 999
Q ss_pred HHHHHhccCCCCCccHHhhcccc
Q 043706 562 LASFSFTHASKFHLFFAIIHPFG 584 (586)
Q Consensus 562 L~~~L~~~~~~~~l~w~~r~~~~ 584 (586)
|.+++.... ..++|..+.+|+
T Consensus 89 L~~ll~~~~--~~l~~~~~~~i~ 109 (483)
T 3sv0_A 89 LEDLFNFCS--RKLSLKTVLMLA 109 (483)
T ss_dssp HHHHHHHTT--TCCCHHHHHHHH
T ss_pred HHHHHHhhc--CCCCHHHHHHHH
Confidence 999998542 347777766654
No 399
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=98.65 E-value=5e-08 Score=100.65 Aligned_cols=84 Identities=15% Similarity=0.044 Sum_probs=57.4
Q ss_pred cceeecCCceEEEEEEeC-CCcEEEEEEecccch---hhHHHHHHHH---HHHHccCCCCcccee-------EEEEeC--
Q 043706 484 AYILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF---ERLKDLESQV---KAIAKLKHPNLVKLR-------GFYWED-- 547 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~---~~~~~f~~e~---~~l~~l~H~niv~l~-------g~~~~~-- 547 (586)
.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+ +.+.. +||||++++ +++...
T Consensus 67 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 67 VEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTS
T ss_pred eeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCC
Confidence 467999999999999974 799999999976532 3345677885 45555 799988755 444433
Q ss_pred ---------------CeEEEEEeccCCCCHHHHHhcc
Q 043706 548 ---------------EEKLLIHDYVSNGCLASFSFTH 569 (586)
Q Consensus 548 ---------------~~~~lv~ey~~~GsL~~~L~~~ 569 (586)
...++|||||+ |+|.+++...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~ 181 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL 181 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence 23799999999 9999999864
No 400
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.52 E-value=1e-07 Score=94.42 Aligned_cols=77 Identities=12% Similarity=0.124 Sum_probs=62.4
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccch------------------hhHHHHHHHHHHHHccCCCCccceeEEEE
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCF------------------ERLKDLESQVKAIAKLKHPNLVKLRGFYW 545 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~------------------~~~~~f~~e~~~l~~l~H~niv~l~g~~~ 545 (586)
.+.||+|+||.||+|...+|+.||+|.++.... .....|.+|++++.+++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 478999999999999997799999999964321 13466999999999999 5 67777554
Q ss_pred eCCeEEEEEeccCCCCHHH
Q 043706 546 EDEEKLLIHDYVSNGCLAS 564 (586)
Q Consensus 546 ~~~~~~lv~ey~~~GsL~~ 564 (586)
. +..++|||||++|+|.+
T Consensus 172 ~-~~~~lvmE~~~g~~L~~ 189 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR 189 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG
T ss_pred c-cceEEEEEecCCCcHHH
Confidence 3 55699999999999998
No 401
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=1.4e-08 Score=93.86 Aligned_cols=94 Identities=16% Similarity=0.184 Sum_probs=50.2
Q ss_pred CccccCCCCCCCEEEccCC-CCCCC----CCccccCCCCCcEEEeeCCCCCCC----CccccCCCCCCcEEEccCCCCCC
Q 043706 104 VTKDLGLIQHLRHLDLSNN-FFNGS----LPLSIFSATELQVLSLSNNAISGE----LPDLIGQIPRLQLLNLSVNALAG 174 (586)
Q Consensus 104 ~~~~l~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 174 (586)
+...+...+.|+.|+|++| .|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3344555666666666666 66532 333444556666666666666532 22333444566666666666653
Q ss_pred C----CchhcCCCCCCcEEec--ccccCC
Q 043706 175 K----VPRNLTAVKSLTVVSL--RSNYFS 197 (586)
Q Consensus 175 ~----~p~~l~~l~~L~~L~L--~~N~l~ 197 (586)
. +...+...+.|+.|+| ++|.|+
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2 2333444455555555 445554
No 402
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=2.6e-08 Score=97.09 Aligned_cols=80 Identities=26% Similarity=0.294 Sum_probs=66.1
Q ss_pred CCCCCCCEEEccCCCCCC--CCCccccCCCCCcEEEeeCCCCCCCCccccCCCC--CCcEEEccCCCCCCCCch------
Q 043706 109 GLIQHLRHLDLSNNFFNG--SLPLSIFSATELQVLSLSNNAISGELPDLIGQIP--RLQLLNLSVNALAGKVPR------ 178 (586)
Q Consensus 109 ~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~------ 178 (586)
.++++|+.|+|++|.|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468899999999999998 5667788999999999999999975 3344444 999999999999987763
Q ss_pred -hcCCCCCCcEEe
Q 043706 179 -NLTAVKSLTVVS 190 (586)
Q Consensus 179 -~l~~l~~L~~L~ 190 (586)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 366788888876
No 403
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=3.3e-08 Score=91.46 Aligned_cols=110 Identities=16% Similarity=0.140 Sum_probs=87.8
Q ss_pred CceEEEEcCCC-CCccc----CccccCCCCCCCEEEccCCCCCCC----CCccccCCCCCcEEEeeCCCCCCC----Ccc
Q 043706 88 FRVISLILPNS-QLLGS----VTKDLGLIQHLRHLDLSNNFFNGS----LPLSIFSATELQVLSLSNNAISGE----LPD 154 (586)
Q Consensus 88 ~~l~~L~L~~n-~l~~~----~~~~l~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 154 (586)
..++.|+|++| .+... +...+...+.|++|+|++|.|... +...+...+.|++|+|++|.|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 67999999999 88753 456677889999999999999753 445566678999999999999854 456
Q ss_pred ccCCCCCCcEEEc--cCCCCCCCC----chhcCCCCCCcEEecccccCC
Q 043706 155 LIGQIPRLQLLNL--SVNALAGKV----PRNLTAVKSLTVVSLRSNYFS 197 (586)
Q Consensus 155 ~~~~l~~L~~L~L--~~N~l~~~~----p~~l~~l~~L~~L~L~~N~l~ 197 (586)
.+...++|++|+| ++|.++... ...+...+.|+.|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6778899999999 889998543 334555688888888888775
No 404
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.37 E-value=3.3e-07 Score=99.89 Aligned_cols=83 Identities=6% Similarity=-0.031 Sum_probs=61.8
Q ss_pred eecCCceEEEEEE-eCCCcEEEEEEecccc----------hhhHHHHHHHHHHHHcc-CCCCccceeEEEEeCCeEEEEE
Q 043706 487 LCTSSSSIVYKAV-LADGTTLAVRRIGETC----------FERLKDLESQVKAIAKL-KHPNLVKLRGFYWEDEEKLLIH 554 (586)
Q Consensus 487 lg~g~~g~vy~~~-~~~g~~vavK~l~~~~----------~~~~~~f~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 554 (586)
.+.|..|.++++. +-.|+.+|||++.... ....++|.+|+++|.++ .|+||+++++|+.+.+..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4555555555443 2358999999996431 12346799999999999 7999999999999999999999
Q ss_pred eccCCCCHHHHHhcc
Q 043706 555 DYVSNGCLASFSFTH 569 (586)
Q Consensus 555 ey~~~GsL~~~L~~~ 569 (586)
||++||+|.++|...
T Consensus 322 Eyv~G~~L~d~i~~~ 336 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG 336 (569)
T ss_dssp ECCCSEEHHHHHHTT
T ss_pred ecCCCCcHHHHHHhC
Confidence 999999999999865
No 405
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.98 E-value=6.8e-06 Score=80.01 Aligned_cols=82 Identities=13% Similarity=0.208 Sum_probs=58.6
Q ss_pred cceeecCCceEEEEEEe-CCCcE--EEEEEecccch------------------------hhHHHHHHHHHHHHccCCCC
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTT--LAVRRIGETCF------------------------ERLKDLESQVKAIAKLKHPN 536 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~--vavK~l~~~~~------------------------~~~~~f~~e~~~l~~l~H~n 536 (586)
...||+|+||.||+|.. .+|+. ||||.++.... .....+.+|++.+.+++|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999999998 68999 99998754311 01136889999999999887
Q ss_pred ccceeEEEEeCCeEEEEEeccCC-C----CHHHHHh
Q 043706 537 LVKLRGFYWEDEEKLLIHDYVSN-G----CLASFSF 567 (586)
Q Consensus 537 iv~l~g~~~~~~~~~lv~ey~~~-G----sL~~~L~ 567 (586)
+.....+.. +..+|||||+.+ | +|.+++.
T Consensus 132 i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~ 165 (258)
T 1zth_A 132 VSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGR 165 (258)
T ss_dssp CCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGG
T ss_pred CCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhh
Confidence 532222222 356899999942 4 7777654
No 406
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=97.81 E-value=1.2e-05 Score=84.13 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=64.9
Q ss_pred cceeecCCceEEEEEEe-CCCcEEEEEEecccch---hhHHHHHHHHHHHHccCC-CCcc----------cee-------
Q 043706 484 AYILCTSSSSIVYKAVL-ADGTTLAVRRIGETCF---ERLKDLESQVKAIAKLKH-PNLV----------KLR------- 541 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~-~~g~~vavK~l~~~~~---~~~~~f~~e~~~l~~l~H-~niv----------~l~------- 541 (586)
.++||+|+||.||+|+. .+|+.||||+++.... ...+.|.+|+.++..++| +|.. .+.
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 46899999999999996 5799999999974322 224779999999999987 3221 111
Q ss_pred ----EEEEe-----CCeEEEEEeccCCCCHHHHHhc----cCCCCCccHHhhccc
Q 043706 542 ----GFYWE-----DEEKLLIHDYVSNGCLASFSFT----HASKFHLFFAIIHPF 583 (586)
Q Consensus 542 ----g~~~~-----~~~~~lv~ey~~~GsL~~~L~~----~~~~~~l~w~~r~~~ 583 (586)
.++.. ....+++|++ .+|+|.+++.. ......++|..+..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i 216 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQL 216 (413)
T ss_dssp --------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHH
T ss_pred CccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHH
Confidence 11111 1234566665 46899999852 122345777777665
No 407
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.73 E-value=9.6e-06 Score=73.38 Aligned_cols=83 Identities=8% Similarity=0.083 Sum_probs=46.8
Q ss_pred CceEEEEcCCCCCcccCccccCCCCCCCEEEccCCC-CCCCCCccccCC----CCCcEEEeeCCC-CCCCCccccCCCCC
Q 043706 88 FRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNF-FNGSLPLSIFSA----TELQVLSLSNNA-ISGELPDLIGQIPR 161 (586)
Q Consensus 88 ~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~-l~g~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 161 (586)
.++++|||+++.++..--..+..+++|+.|+|++|. |+..--..+..+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777665555556666777777776663 554333334433 256666666653 54333333445555
Q ss_pred CcEEEccCC
Q 043706 162 LQLLNLSVN 170 (586)
Q Consensus 162 L~~L~L~~N 170 (586)
|+.|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 408
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.63 E-value=2.5e-05 Score=70.67 Aligned_cols=86 Identities=9% Similarity=0.050 Sum_probs=70.3
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCC-CCCCCccccCCC----CCCcEEEccCCC-CCCCCchhcCCCCC
Q 043706 112 QHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNA-ISGELPDLIGQI----PRLQLLNLSVNA-LAGKVPRNLTAVKS 185 (586)
Q Consensus 112 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~ 185 (586)
..|+.|||+++.|+..--..+.++++|+.|+|++|. ++..--..++.+ ++|++|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999987656678899999999999995 775444556665 479999999985 88665567889999
Q ss_pred CcEEeccccc-CC
Q 043706 186 LTVVSLRSNY-FS 197 (586)
Q Consensus 186 L~~L~L~~N~-l~ 197 (586)
|+.|+|+++. ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999985 44
No 409
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.62 E-value=1.5e-05 Score=81.74 Aligned_cols=81 Identities=6% Similarity=-0.056 Sum_probs=53.6
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccch--------------hhHHH--------HHHHHHHHHccCCCCcccee
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCF--------------ERLKD--------LESQVKAIAKLKHPNLVKLR 541 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~--------------~~~~~--------f~~e~~~l~~l~H~niv~l~ 541 (586)
...||+|+||.||+|..++|+.||||+++.... ..... ...|.+.|.++.+..+....
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~ 179 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPE 179 (397)
T ss_dssp EEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCC
T ss_pred cCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence 568999999999999998999999998753210 00111 23456666666555443222
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHH
Q 043706 542 GFYWEDEEKLLIHDYVSNGCLASFS 566 (586)
Q Consensus 542 g~~~~~~~~~lv~ey~~~GsL~~~L 566 (586)
-+.... .+|||||++++.|.++.
T Consensus 180 p~~~~~--~~LVME~i~G~~L~~l~ 202 (397)
T 4gyi_A 180 PIAQSR--HTIVMSLVDALPMRQVS 202 (397)
T ss_dssp EEEEET--TEEEEECCSCEEGGGCC
T ss_pred eeeccC--ceEEEEecCCccHhhhc
Confidence 222222 36999999999887653
No 410
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.44 E-value=0.00063 Score=70.31 Aligned_cols=56 Identities=14% Similarity=0.164 Sum_probs=29.3
Q ss_pred CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCC
Q 043706 205 TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFN 263 (586)
Q Consensus 205 ~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N 263 (586)
.+|+.+.+..+ ++......|.. .+|+.++|..+ ++ .|+...+.++.+|+.+++..|
T Consensus 297 ~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 297 SSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 55666665443 44333444444 56666666533 43 444444444666666666544
No 411
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.32 E-value=5e-05 Score=69.98 Aligned_cols=86 Identities=23% Similarity=0.290 Sum_probs=41.9
Q ss_pred cCCCCCCCEEEccCC-CCCCC----CCccccCCCCCcEEEeeCCCCCCC----CccccCCCCCCcEEEccCCCCCCCC--
Q 043706 108 LGLIQHLRHLDLSNN-FFNGS----LPLSIFSATELQVLSLSNNAISGE----LPDLIGQIPRLQLLNLSVNALAGKV-- 176 (586)
Q Consensus 108 l~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-- 176 (586)
+.+-+.|+.|+|++| .|... +...+..-+.|+.|+|++|+|... +.+.+..-+.|+.|+|+.|.|+...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344556666666654 55421 333444555666666666665421 2233334455666666666655321
Q ss_pred --chhcCCCCCCcEEeccc
Q 043706 177 --PRNLTAVKSLTVVSLRS 193 (586)
Q Consensus 177 --p~~l~~l~~L~~L~L~~ 193 (586)
...+..-+.|+.|+|++
T Consensus 117 ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHhhCCceeEEECCC
Confidence 12233334455555543
No 412
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.23 E-value=8.3e-05 Score=68.51 Aligned_cols=60 Identities=13% Similarity=0.180 Sum_probs=28.5
Q ss_pred CCCcEEecccCCCCCcCCcC----CCC-CcccEEEcccC---cCCCc----CcHHHHhcCCCCcEEEccCCCC
Q 043706 205 TSVEVLDLSSNLFNGSLPLD----FGG-GNLRYLNLSYN---KISGS----ISPEFAKRIPQNVTIDLSFNNL 265 (586)
Q Consensus 205 ~~L~~L~Ls~N~l~~~~p~~----~~~-~~L~~L~ls~N---~l~g~----ip~~~~~~l~~L~~L~Ls~N~l 265 (586)
+.|+.|+|+.|.|+...-.. +.. ..|+.|+|++| .+... +-..+.. -+.|+.|+++.|.+
T Consensus 98 ~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~-N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 98 PSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEE-NESLLRVGISFASM 169 (197)
T ss_dssp SSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHH-CSSCCEEECCCCCH
T ss_pred CccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHh-CCCcCeEeccCCCc
Confidence 34555555555554332221 211 45677777654 23211 2222333 46777777766643
No 413
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.17 E-value=0.00061 Score=67.21 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=59.9
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCC---CccceeEEEEeCCeEEEEEeccCCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHP---NLVKLRGFYWEDEEKLLIHDYVSNG 560 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~ey~~~G 560 (586)
.+.|+.|.++.||+.+..+|..++||+...........|..|++.|..++|. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 3468999999999999988999999997544332335689999999999876 466777653 468999999998
Q ss_pred CH
Q 043706 561 CL 562 (586)
Q Consensus 561 sL 562 (586)
.+
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 414
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.11 E-value=0.0015 Score=67.45 Aligned_cols=171 Identities=16% Similarity=0.124 Sum_probs=97.8
Q ss_pred CCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCC-------------------
Q 043706 87 MFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNA------------------- 147 (586)
Q Consensus 87 ~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~------------------- 147 (586)
+.+++.+.|.++ +.......|.++.+|+.+++..| ++..-...|.++..|+.+.+..+.
T Consensus 161 c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip 238 (394)
T 4fs7_A 161 CESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNIIIP 238 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEEC
T ss_pred cCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEEEC
Confidence 456677777644 23333455666666666666554 322223333333333333332211
Q ss_pred --CCCCCccccCCCCCCcEEEccCCCCC-------------------CCC-chhcCCCCCCcEEecccccCCcCCCCCC-
Q 043706 148 --ISGELPDLIGQIPRLQLLNLSVNALA-------------------GKV-PRNLTAVKSLTVVSLRSNYFSGSIPSGF- 204 (586)
Q Consensus 148 --l~~~~p~~~~~l~~L~~L~L~~N~l~-------------------~~~-p~~l~~l~~L~~L~L~~N~l~g~~p~~l- 204 (586)
++......|..+..|+.+.+..+... ..+ ...|..+.+|+.+.+..+ ++..-...|
T Consensus 239 ~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~ 317 (394)
T 4fs7_A 239 DSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFE 317 (394)
T ss_dssp TTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTT
T ss_pred CCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccccccccccccc-cceechhhhc
Confidence 11111233445556666665544321 011 124566777887777654 443333334
Q ss_pred --CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCC
Q 043706 205 --TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFN 263 (586)
Q Consensus 205 --~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N 263 (586)
.+|+.++|..+ ++......|.. .+|+.+++..| ++ .|+...+.++++|+.+++..+
T Consensus 318 ~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 318 SCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred CCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 78999999754 76666667777 89999999877 65 677766777999999998754
No 415
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.08 E-value=0.00055 Score=58.80 Aligned_cols=59 Identities=24% Similarity=0.316 Sum_probs=30.4
Q ss_pred CCCccceeeCCCCCC--CcCCCCCCCceEEEEcCCCCCcccCccccCCCCCCCEEEccCCCC
Q 043706 65 PCSWTGVTCTQIDAT--TIPGSPDMFRVISLILPNSQLLGSVTKDLGLIQHLRHLDLSNNFF 124 (586)
Q Consensus 65 ~C~w~gv~C~~~~~~--~ip~~~~~~~l~~L~L~~n~l~~~~~~~l~~l~~L~~L~Ls~N~l 124 (586)
-|.-..|.|...+++ .+|.... .+++.|+|++|.|+...+..|..+++|+.|+|++|.+
T Consensus 7 ~C~~~~v~Cs~~~L~~~~vP~~lp-~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 7 SCAGTLVDCGRRGLTWASLPTAFP-VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEETTEEECCSSCCCTTTSCSCCC-TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEcCCEEEeCCCCCccccCCCCCC-cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 344456777776666 6665433 3444555555555444444444444444444444443
No 416
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.01 E-value=0.0018 Score=66.89 Aligned_cols=132 Identities=12% Similarity=0.133 Sum_probs=78.4
Q ss_pred cCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCC
Q 043706 103 SVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTA 182 (586)
Q Consensus 103 ~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 182 (586)
.-..+|..+..|+.+.+.++... .-...|.++..|+.+.+. +.++......|.++.+|+.++|..+ ++..-...|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 33456777888888888765432 445567778888888885 4455444566778888888888754 55444567888
Q ss_pred CCCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCCcCCCCCcccEEEcccCcC
Q 043706 183 VKSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPLDFGGGNLRYLNLSYNKI 240 (586)
Q Consensus 183 l~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~ls~N~l 240 (586)
+.+|+.+.|..+ ++..-...| .+|+.+++.+|.... ...+...+|+.+.+..|.+
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC----------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCCCE
Confidence 888888888654 443333333 678888887765431 1122236777777776654
No 417
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=96.95 E-value=0.0017 Score=62.69 Aligned_cols=79 Identities=16% Similarity=0.030 Sum_probs=63.2
Q ss_pred eeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccC-CCCccceeEEEEeCCeEEEEEeccCCCCHHH
Q 043706 486 ILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLK-HPNLVKLRGFYWEDEEKLLIHDYVSNGCLAS 564 (586)
Q Consensus 486 ~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~GsL~~ 564 (586)
.++.|+.+.||+.... |..+++|+...........+.+|++++..+. |..+.++++++...+..++||||++|.+|.+
T Consensus 21 ~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 99 (263)
T 3tm0_A 21 DTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE 99 (263)
T ss_dssp CCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred eccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhh
Confidence 4566677889999764 6889999997532222345889999999884 6778889999998899999999999999987
Q ss_pred H
Q 043706 565 F 565 (586)
Q Consensus 565 ~ 565 (586)
.
T Consensus 100 ~ 100 (263)
T 3tm0_A 100 E 100 (263)
T ss_dssp H
T ss_pred c
Confidence 5
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.74 E-value=0.0056 Score=62.59 Aligned_cols=140 Identities=12% Similarity=0.142 Sum_probs=83.7
Q ss_pred CccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCC
Q 043706 104 VTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAV 183 (586)
Q Consensus 104 ~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 183 (586)
....+.....|+.+.+..+ +...-...+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|.++
T Consensus 209 ~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c 285 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC 285 (379)
T ss_dssp CTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC
T ss_pred eecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccc
Confidence 3345566677777777554 33344556667777777777655 44444556667777777777543 443334466777
Q ss_pred CCCcEEecccccCCcCCCCCC---CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHH
Q 043706 184 KSLTVVSLRSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFA 249 (586)
Q Consensus 184 ~~L~~L~L~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~ 249 (586)
.+|+.+.+.++.++..-...| .+|+.++|..+ ++......|.. .+|+.+.+..+ ++ .|....+
T Consensus 286 ~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~-~I~~~aF 352 (379)
T 4h09_A 286 SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT-LIESGAF 352 (379)
T ss_dssp TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTTTT
T ss_pred cccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC-EEchhHh
Confidence 777777777766664434444 56777777543 55444555655 67777777544 43 3444333
No 419
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.71 E-value=0.0026 Score=65.58 Aligned_cols=146 Identities=11% Similarity=0.103 Sum_probs=94.4
Q ss_pred CCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCCCcEEec
Q 043706 112 QHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKSLTVVSL 191 (586)
Q Consensus 112 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 191 (586)
..+..+.+.. .++..-..+|.++..|+.+.+..+..+ .....|.++.+|+.+.+. +.++......|.++.+|+.+.|
T Consensus 242 ~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~l 318 (394)
T 4gt6_A 242 REDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDI 318 (394)
T ss_dssp CCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEEC
T ss_pred cccceEEcCC-cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEe
Confidence 4455555543 233344567889999999999776543 445678899999999996 5566455567899999999999
Q ss_pred ccccCCcCCCCCC---CCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEccCCCCc
Q 043706 192 RSNYFSGSIPSGF---TSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLSFNNLT 266 (586)
Q Consensus 192 ~~N~l~g~~p~~l---~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~ 266 (586)
..+ ++..-...| .+|+.+.|..+ ++......|.. .+|+.+++.+|.... ..+. ...+|+.|.+..|.+.
T Consensus 319 p~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~-~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 319 PEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAIS-TDSGLQNLPVAPGSID 391 (394)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCB-CCCCC-----------
T ss_pred CCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhh-ccCCCCEEEeCCCCEE
Confidence 765 543333444 78999999654 66555667777 899999999886431 2223 3678888888777653
No 420
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.64 E-value=0.0031 Score=54.00 Aligned_cols=35 Identities=26% Similarity=0.432 Sum_probs=14.9
Q ss_pred CcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCC
Q 043706 138 LQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNAL 172 (586)
Q Consensus 138 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 172 (586)
|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444433333344444444444444433
No 421
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=96.57 E-value=0.0022 Score=61.52 Aligned_cols=72 Identities=14% Similarity=0.136 Sum_probs=57.0
Q ss_pred cCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCc-c-ceeEEEEeCCeEEEEEeccCCCCHH
Q 043706 489 TSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNL-V-KLRGFYWEDEEKLLIHDYVSNGCLA 563 (586)
Q Consensus 489 ~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~ni-v-~l~g~~~~~~~~~lv~ey~~~GsL~ 563 (586)
.|..+.||+....+|..+++|....... ..+..|++++..+.+.++ | +++++....+..++||||+++.+|.
T Consensus 30 gg~~~~v~~~~~~~g~~~vlK~~~~~~~---~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 30 GCSDAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp TTSSCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred CCCCceEEEEecCCCCeEEEEeCCcccc---hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 4556899999887788899999865422 457889999998866565 4 4888888777899999999998884
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=96.51 E-value=0.011 Score=60.37 Aligned_cols=152 Identities=10% Similarity=0.073 Sum_probs=110.8
Q ss_pred cccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccCCCCCCCCchhcCCCCC
Q 043706 106 KDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSVNALAGKVPRNLTAVKS 185 (586)
Q Consensus 106 ~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 185 (586)
..+.....+..+.+..+. .......+..+..|+.+.+..+ +.......|.++..|+.+.+..+ ++..-...|.++.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~ 264 (379)
T 4h09_A 188 ESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTA 264 (379)
T ss_dssp EECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTT
T ss_pred ccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeeh
Confidence 345556667777665543 2245566778899999998765 44345567888999999999876 66555667889999
Q ss_pred CcEEecccccCCcCCC---CCCCCCcEEecccCCCCCcCCcCCCC-CcccEEEcccCcCCCcCcHHHHhcCCCCcEEEcc
Q 043706 186 LTVVSLRSNYFSGSIP---SGFTSVEVLDLSSNLFNGSLPLDFGG-GNLRYLNLSYNKISGSISPEFAKRIPQNVTIDLS 261 (586)
Q Consensus 186 L~~L~L~~N~l~g~~p---~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~ls~N~l~g~ip~~~~~~l~~L~~L~Ls 261 (586)
|+.+.+..+ +..... ....+|+.+.+.++.++......|.. .+|+.+.|..+ ++ .|....+.++.+|+.+.+.
T Consensus 265 l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 265 LKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp CCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCC
T ss_pred hcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEEC
Confidence 999998654 432222 23478999999999998777777877 89999999765 55 6666666668999988876
Q ss_pred CC
Q 043706 262 FN 263 (586)
Q Consensus 262 ~N 263 (586)
.+
T Consensus 342 ~~ 343 (379)
T 4h09_A 342 KS 343 (379)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 423
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=94.12 E-value=0.096 Score=51.08 Aligned_cols=74 Identities=19% Similarity=0.260 Sum_probs=53.5
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCC---CccceeEEEEeCCeEEEEEeccCCCC
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHP---NLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
..+|.|..+.||+.++.+|+.+.||+...........|..|.+.|..+.-. .+.++++ .. ..++||||++.+.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~--~~--~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAG--WD--DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEE--EE--TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEe--cc--CceEEEEeecccC
Confidence 458999999999999999999999987654433334688999999888432 2233333 22 3478999998775
Q ss_pred H
Q 043706 562 L 562 (586)
Q Consensus 562 L 562 (586)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 424
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=93.66 E-value=0.057 Score=54.57 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=56.0
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEec--ccch-hhHHHHHHHHHHHHccC--CCCccceeEEEEeC---CeEEEEEec
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIG--ETCF-ERLKDLESQVKAIAKLK--HPNLVKLRGFYWED---EEKLLIHDY 556 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~--~~~~-~~~~~f~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~ey 556 (586)
..++.|.++.||+....+ ..+++|+.. .... ....++.+|.+++..+. +..+.++++++... +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 458889999999998754 578888876 4321 22356889999999987 45577888888766 458999999
Q ss_pred cCCCCHH
Q 043706 557 VSNGCLA 563 (586)
Q Consensus 557 ~~~GsL~ 563 (586)
+++..+.
T Consensus 123 v~G~~l~ 129 (359)
T 3dxp_A 123 VSGRVLW 129 (359)
T ss_dssp CCCBCCC
T ss_pred cCCeecC
Confidence 9998773
No 425
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=91.96 E-value=0.59 Score=44.66 Aligned_cols=78 Identities=10% Similarity=0.124 Sum_probs=58.1
Q ss_pred eeecCCce-EEEEEEeC-CCcEEEEEEecccchhhHHHHHHHHHHHHccC-CCCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 486 ILCTSSSS-IVYKAVLA-DGTTLAVRRIGETCFERLKDLESQVKAIAKLK-HPNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 486 ~lg~g~~g-~vy~~~~~-~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.+..|..| .||+.... ++..+.+|+-.... ..++.+|...|..+. +-.+-++++++...+..++||||+++.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~---~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGSV---ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETHH---HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCCC---HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 34556555 58987764 56788999875432 356888999888774 44466788999999999999999999887
Q ss_pred HHHH
Q 043706 563 ASFS 566 (586)
Q Consensus 563 ~~~L 566 (586)
.+..
T Consensus 108 ~~~~ 111 (272)
T 4gkh_A 108 FQVL 111 (272)
T ss_dssp HHHH
T ss_pred cccc
Confidence 7653
No 426
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=91.38 E-value=0.14 Score=32.96 Aligned_cols=30 Identities=33% Similarity=0.449 Sum_probs=21.2
Q ss_pred CCCccceehhhHHHHHHHHHHHHHHHHHHH
Q 043706 347 GLKPGTIAAIAVADLAGIGLLAFIVFYVYQ 376 (586)
Q Consensus 347 ~~~~~~i~~iv~~~~~~~~~l~~i~~~~~~ 376 (586)
+.+.+.+++++++.++++++++.+.+++++
T Consensus 7 ~ls~GaIAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 7 GLTGGEIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCceeeeehHHHHHHHHHHHHHHHHee
Confidence 456778888998888877776666555443
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=91.36 E-value=0.62 Score=45.95 Aligned_cols=74 Identities=11% Similarity=0.046 Sum_probs=58.5
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccC---CCCccceeEEEEeCCeEEEEEeccCCCC
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLK---HPNLVKLRGFYWEDEEKLLIHDYVSNGC 561 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ey~~~Gs 561 (586)
..|+.|.+..+|+... ++..++||+.... ....|..|.+.|..+. ...+.++++++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 3578899999999886 4677888987643 2456888988888773 3567788888888888999999999986
Q ss_pred H
Q 043706 562 L 562 (586)
Q Consensus 562 L 562 (586)
+
T Consensus 118 ~ 118 (312)
T 3jr1_A 118 N 118 (312)
T ss_dssp C
T ss_pred C
Confidence 5
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=90.27 E-value=0.35 Score=49.42 Aligned_cols=75 Identities=11% Similarity=0.071 Sum_probs=49.0
Q ss_pred ceeecCCceEEEEEEeC-CCcEEEEEEecccch-------hhHHHHHHHHHHHHccCC--CCccc-eeEEEEeCCeEEEE
Q 043706 485 YILCTSSSSIVYKAVLA-DGTTLAVRRIGETCF-------ERLKDLESQVKAIAKLKH--PNLVK-LRGFYWEDEEKLLI 553 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~-~g~~vavK~l~~~~~-------~~~~~f~~e~~~l~~l~H--~niv~-l~g~~~~~~~~~lv 553 (586)
+.+|.|.++.||++... ++..++||....... ...+.+..|.+++..+.+ +..++ ++.+ ..+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999764 578899998653211 122456778888887742 44454 4432 45566899
Q ss_pred EeccCCCC
Q 043706 554 HDYVSNGC 561 (586)
Q Consensus 554 ~ey~~~Gs 561 (586)
|||+++..
T Consensus 114 mE~l~g~~ 121 (397)
T 2olc_A 114 MEDLSHLK 121 (397)
T ss_dssp ECCCTTSE
T ss_pred EEeCCCcc
Confidence 99998743
No 429
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=87.09 E-value=0.87 Score=44.92 Aligned_cols=70 Identities=9% Similarity=0.107 Sum_probs=51.5
Q ss_pred cceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCC---C-CccceeEEEEeCCeEEEEEeccCC
Q 043706 484 AYILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKH---P-NLVKLRGFYWEDEEKLLIHDYVSN 559 (586)
Q Consensus 484 ~~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H---~-niv~l~g~~~~~~~~~lv~ey~~~ 559 (586)
...++.|....||+. |..+++|+...... ...+.+|.+++..+.+ + .+.+++++ +..++||||+++
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~--~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRDSV--RISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHHH--HHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcHHH--HHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 456899999999988 67788988754322 2458899999988876 1 22344443 567899999999
Q ss_pred CCHH
Q 043706 560 GCLA 563 (586)
Q Consensus 560 GsL~ 563 (586)
.++.
T Consensus 112 ~~l~ 115 (320)
T 3r70_A 112 ERIT 115 (320)
T ss_dssp BCCC
T ss_pred cccc
Confidence 9886
No 430
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=85.60 E-value=2.2 Score=42.94 Aligned_cols=73 Identities=8% Similarity=-0.012 Sum_probs=55.5
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCC--ccceeEEEEeC-CeEEEEEeccCCCC
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPN--LVKLRGFYWED-EEKLLIHDYVSNGC 561 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~n--iv~l~g~~~~~-~~~~lv~ey~~~Gs 561 (586)
..++.|....+|+... +|..+++|..... ..+..|..++..+.... +.++++++... +..++||||+++..
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4578899999999876 5788999987543 25888999998887644 44667776654 57899999999866
Q ss_pred HH
Q 043706 562 LA 563 (586)
Q Consensus 562 L~ 563 (586)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 431
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=85.38 E-value=1.9 Score=42.16 Aligned_cols=74 Identities=11% Similarity=-0.008 Sum_probs=53.9
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCC---CccceeEEEE-eCCeEEEEEeccCCC
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHP---NLVKLRGFYW-EDEEKLLIHDYVSNG 560 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~ey~~~G 560 (586)
..++.|....||+. |..+++|.-.. ......+..|.++|..+.+. .+.+.+.++. ..+..++||||+++.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 35778888889987 56788888532 22346789999999999753 2445666664 345678999999998
Q ss_pred CHHH
Q 043706 561 CLAS 564 (586)
Q Consensus 561 sL~~ 564 (586)
.+.+
T Consensus 99 ~l~~ 102 (306)
T 3tdw_A 99 ILGE 102 (306)
T ss_dssp ECHH
T ss_pred ECch
Confidence 8865
No 432
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=84.93 E-value=1.3 Score=29.44 Aligned_cols=17 Identities=29% Similarity=0.202 Sum_probs=6.3
Q ss_pred eehhhHHHHHHHHHHHH
Q 043706 353 IAAIAVADLAGIGLLAF 369 (586)
Q Consensus 353 i~~iv~~~~~~~~~l~~ 369 (586)
+++.+++.+++++++++
T Consensus 13 IA~gVVgGv~~~~ii~~ 29 (44)
T 2ks1_B 13 IATGMVGALLLLLVVAL 29 (44)
T ss_dssp STHHHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHHHH
Confidence 33333333333333333
No 433
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=83.43 E-value=0.49 Score=47.40 Aligned_cols=79 Identities=15% Similarity=0.044 Sum_probs=54.1
Q ss_pred ee-ecCCceEEEEEEeC-------CCcEEEEEEecccc---hhhHHHHHHHHHHHHccCC---CCccceeEEEEeC---C
Q 043706 486 IL-CTSSSSIVYKAVLA-------DGTTLAVRRIGETC---FERLKDLESQVKAIAKLKH---PNLVKLRGFYWED---E 548 (586)
Q Consensus 486 ~l-g~g~~g~vy~~~~~-------~g~~vavK~l~~~~---~~~~~~f~~e~~~l~~l~H---~niv~l~g~~~~~---~ 548 (586)
.| +.|....+|+.... +|..+++|+..... ......+.+|++++..+.. -.+.++++++... +
T Consensus 27 ~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g 106 (357)
T 3ats_A 27 GVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG 106 (357)
T ss_dssp EECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS
T ss_pred ECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC
Confidence 46 77888899988764 26778888875433 1112457788888887743 3456777777554 3
Q ss_pred eEEEEEeccCCCCHHH
Q 043706 549 EKLLIHDYVSNGCLAS 564 (586)
Q Consensus 549 ~~~lv~ey~~~GsL~~ 564 (586)
..++||||+++..+.+
T Consensus 107 ~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 107 TPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SCEEEEECCCCBCCCB
T ss_pred CceEEEEecCCCChhh
Confidence 5689999999877653
No 434
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=83.21 E-value=0.83 Score=30.28 Aligned_cols=7 Identities=0% Similarity=-0.102 Sum_probs=2.5
Q ss_pred HHHHHHH
Q 043706 362 AGIGLLA 368 (586)
Q Consensus 362 ~~~~~l~ 368 (586)
+++++++
T Consensus 21 ~~v~ii~ 27 (44)
T 2l2t_A 21 FILVIVG 27 (44)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 435
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=81.12 E-value=0.21 Score=52.38 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=15.4
Q ss_pred ceEEEEEEeCC-CcEEEE------EEecccc--hhhHHHHHHHHHHHHccCCCCccceeEEEEe
Q 043706 492 SSIVYKAVLAD-GTTLAV------RRIGETC--FERLKDLESQVKAIAKLKHPNLVKLRGFYWE 546 (586)
Q Consensus 492 ~g~vy~~~~~~-g~~vav------K~l~~~~--~~~~~~f~~e~~~l~~l~H~niv~l~g~~~~ 546 (586)
||.||+|.+.. ..+||| |..+... .....+|.+|..++...+|+|+++.++|...
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 99999999853 468888 7776542 2334578999999999999999999988754
No 436
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=77.52 E-value=1.8 Score=28.58 Aligned_cols=8 Identities=25% Similarity=0.376 Sum_probs=4.1
Q ss_pred ceehhhHH
Q 043706 352 TIAAIAVA 359 (586)
Q Consensus 352 ~i~~iv~~ 359 (586)
.+++++++
T Consensus 13 ~Ia~~vVG 20 (44)
T 2jwa_A 13 SIISAVVG 20 (44)
T ss_dssp HHHHHHHH
T ss_pred chHHHHHH
Confidence 34555555
No 437
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=74.48 E-value=6.9 Score=38.24 Aligned_cols=72 Identities=15% Similarity=0.271 Sum_probs=40.5
Q ss_pred eeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHcc-----CCCCcccee-E--EEEeCCeEEEEEecc
Q 043706 486 ILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKL-----KHPNLVKLR-G--FYWEDEEKLLIHDYV 557 (586)
Q Consensus 486 ~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lv~ey~ 557 (586)
.|+.|..+.||+....+| .+++|+..... +++..|..++..+ ..|.++.-. | +....+..++||||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 455667889999987655 48999987521 2233344444333 234444311 1 123467789999999
Q ss_pred CCCCH
Q 043706 558 SNGCL 562 (586)
Q Consensus 558 ~~GsL 562 (586)
++..+
T Consensus 114 ~G~~~ 118 (346)
T 2q83_A 114 EGRPF 118 (346)
T ss_dssp CCBCC
T ss_pred cCccC
Confidence 98654
No 438
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=72.54 E-value=2.7 Score=40.87 Aligned_cols=74 Identities=11% Similarity=0.040 Sum_probs=50.4
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccC-CCCc--cceeEEEEeCC---eEEEEEeccC
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLK-HPNL--VKLRGFYWEDE---EKLLIHDYVS 558 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~-H~ni--v~l~g~~~~~~---~~~lv~ey~~ 558 (586)
..++.|.+..||+.. ..+++|..... .....+.+|.+++..+. +..+ ..+++++...+ ..++||||++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458889999999863 56888886543 23467899999998884 4433 23333332222 3588999999
Q ss_pred CCCHHH
Q 043706 559 NGCLAS 564 (586)
Q Consensus 559 ~GsL~~ 564 (586)
+..|.+
T Consensus 100 G~~l~~ 105 (304)
T 3sg8_A 100 GVPLTP 105 (304)
T ss_dssp CEECCH
T ss_pred CeECCc
Confidence 988765
No 439
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=63.28 E-value=18 Score=35.10 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=48.2
Q ss_pred eeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCC--ccceeEE-----EEeCCeEEEEEeccC
Q 043706 486 ILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPN--LVKLRGF-----YWEDEEKLLIHDYVS 558 (586)
Q Consensus 486 ~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~n--iv~l~g~-----~~~~~~~~lv~ey~~ 558 (586)
.++ |....||+....+|..+++|....... ..+++..|..++..+.... +.+++.. ....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 355 777789998877787899999864321 2345667777777664222 3344432 223556788999999
Q ss_pred CCCH
Q 043706 559 NGCL 562 (586)
Q Consensus 559 ~GsL 562 (586)
+..+
T Consensus 111 G~~~ 114 (328)
T 1zyl_A 111 GRQF 114 (328)
T ss_dssp CEEC
T ss_pred CCCC
Confidence 8543
No 440
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=56.97 E-value=12 Score=24.76 Aligned_cols=26 Identities=19% Similarity=0.189 Sum_probs=18.3
Q ss_pred cceehhhHHHHHHHHHHHHHHHHHHH
Q 043706 351 GTIAAIAVADLAGIGLLAFIVFYVYQ 376 (586)
Q Consensus 351 ~~i~~iv~~~~~~~~~l~~i~~~~~~ 376 (586)
....+|+++++.++++++++.+.++.
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~~~~ 33 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALGIGL 33 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEeehhHHHHHHHHHHHHHHH
Confidence 34578888877778888877775433
No 441
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=54.86 E-value=17 Score=23.99 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=13.4
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 043706 355 AIAVADLAGIGLLAFIVFY 373 (586)
Q Consensus 355 ~iv~~~~~~~~~l~~i~~~ 373 (586)
+|+.+++.+++.++++...
T Consensus 11 aIA~gVVgGv~~v~ii~~~ 29 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLT 29 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeehHHHHHHHHHHHH
Confidence 4666666778887877764
No 442
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=54.83 E-value=9.1 Score=23.58 Aligned_cols=26 Identities=38% Similarity=0.696 Sum_probs=17.1
Q ss_pred CCccceehhhHHHHHHHHHHHHHHHH
Q 043706 348 LKPGTIAAIAVADLAGIGLLAFIVFY 373 (586)
Q Consensus 348 ~~~~~i~~iv~~~~~~~~~l~~i~~~ 373 (586)
.+.+.+++|+++.+++.+++++.+++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHHHhh
Confidence 34567788888877776665555444
No 443
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=52.62 E-value=6.5 Score=25.42 Aligned_cols=13 Identities=23% Similarity=0.225 Sum_probs=5.5
Q ss_pred hhHHHHHHHHHHH
Q 043706 356 IAVADLAGIGLLA 368 (586)
Q Consensus 356 iv~~~~~~~~~l~ 368 (586)
|+.+++.++++++
T Consensus 15 I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 15 VIGGVAVGVVLLL 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHH
Confidence 4444444444433
No 444
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=48.00 E-value=17 Score=27.51 Aligned_cols=21 Identities=14% Similarity=0.300 Sum_probs=10.2
Q ss_pred eehhhHHHHHHHHHHHHHHHH
Q 043706 353 IAAIAVADLAGIGLLAFIVFY 373 (586)
Q Consensus 353 i~~iv~~~~~~~~~l~~i~~~ 373 (586)
+++|+.++++++++++++++.
T Consensus 10 ~~~Iv~gvi~gilliGlllll 30 (79)
T 2knc_B 10 ILVVLLSVMGAILLIGLAALL 30 (79)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHH
Confidence 344555555555555444433
No 445
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=45.57 E-value=25 Score=36.00 Aligned_cols=72 Identities=15% Similarity=0.175 Sum_probs=48.0
Q ss_pred ceeecCCceEEEEEEeCC--------CcEEEEEEecccchhhHHHHHHHHHHHHccCCCCc-cceeEEEEeCCeEEEEEe
Q 043706 485 YILCTSSSSIVYKAVLAD--------GTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNL-VKLRGFYWEDEEKLLIHD 555 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~--------g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~e 555 (586)
..|+.|....+|+...++ +..+.+|+..... ..+.+..|..++..+...++ .++++++. + .+|||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 357778888999998753 4788899884321 11456688888888754455 45555442 2 38999
Q ss_pred ccCCCCH
Q 043706 556 YVSNGCL 562 (586)
Q Consensus 556 y~~~GsL 562 (586)
|+++-+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986343
No 446
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=42.61 E-value=50 Score=31.95 Aligned_cols=78 Identities=12% Similarity=0.021 Sum_probs=40.6
Q ss_pred eeecCCceE-EEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCC--CCccceeEEEEeCCeEEEEEeccCCCCH
Q 043706 486 ILCTSSSSI-VYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKH--PNLVKLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 486 ~lg~g~~g~-vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.|+.|.... +|+....+|..+++|....... +++..|++++..+.. -.+.+++.+....+ ++|||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcch
Confidence 354454443 6677654467777776544321 223445555555532 23445666543333 789999988888
Q ss_pred HHHHhc
Q 043706 563 ASFSFT 568 (586)
Q Consensus 563 ~~~L~~ 568 (586)
.+++.+
T Consensus 100 ~~~l~~ 105 (333)
T 3csv_A 100 TEVINN 105 (333)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 776654
No 447
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=42.60 E-value=27 Score=33.68 Aligned_cols=74 Identities=8% Similarity=-0.043 Sum_probs=42.1
Q ss_pred eeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCc--cceeE------EEEeCCeEEEEEecc
Q 043706 486 ILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNL--VKLRG------FYWEDEEKLLIHDYV 557 (586)
Q Consensus 486 ~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~ni--v~l~g------~~~~~~~~~lv~ey~ 557 (586)
.|+.|....+|+....+| .+++|....... .+++..|+.++..+....+ .+++. +....+..++|+||+
T Consensus 29 ~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~--~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~l 105 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD-PLILTLYEKRVE--KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISFL 105 (322)
T ss_dssp EECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEECC
T ss_pred ccCCCcccceEEEEeCCc-cEEEEEeCCCCC--HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEeC
Confidence 466777788999987666 578998865311 1234556666665532222 22331 112346678999999
Q ss_pred CCCCH
Q 043706 558 SNGCL 562 (586)
Q Consensus 558 ~~GsL 562 (586)
++..+
T Consensus 106 ~G~~~ 110 (322)
T 2ppq_A 106 EGMWL 110 (322)
T ss_dssp CCBCC
T ss_pred CCcCC
Confidence 98653
No 448
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=42.23 E-value=36 Score=34.43 Aligned_cols=72 Identities=11% Similarity=0.067 Sum_probs=44.4
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEeccc--------c-hhhHHHHHHHHHHHH-ccCCCCccceeEEEEeCCeEEEEE
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIGET--------C-FERLKDLESQVKAIA-KLKHPNLVKLRGFYWEDEEKLLIH 554 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~~~--------~-~~~~~~f~~e~~~l~-~l~H~niv~l~g~~~~~~~~~lv~ 554 (586)
..+|.|....||+... ++..++||..... . ......+..|+..+. ...+..+.+++++. .+..++||
T Consensus 40 ~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~ 116 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGM 116 (420)
T ss_dssp EECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEE
T ss_pred EEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEE
Confidence 4578899999999965 4678999943211 0 012234555554333 22334455666554 56779999
Q ss_pred ecc-CC
Q 043706 555 DYV-SN 559 (586)
Q Consensus 555 ey~-~~ 559 (586)
||+ ++
T Consensus 117 e~l~~g 122 (420)
T 2pyw_A 117 RYLEPP 122 (420)
T ss_dssp CCCCTT
T ss_pred eecCCc
Confidence 999 76
No 449
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=38.07 E-value=25 Score=35.27 Aligned_cols=72 Identities=18% Similarity=0.281 Sum_probs=42.9
Q ss_pred eeecCCceEEEEEEeC--------CCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCcc-ceeEEEEeCCeEEEEEec
Q 043706 486 ILCTSSSSIVYKAVLA--------DGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLV-KLRGFYWEDEEKLLIHDY 556 (586)
Q Consensus 486 ~lg~g~~g~vy~~~~~--------~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey 556 (586)
.+..|-...+|+...+ ++..+.+|+.... ......+.+|.+++..+.-..+. ++++++. + -+||||
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e~ 131 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQY 131 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEEC
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEEE
Confidence 3555667778988874 2478888886432 22345677899888877544444 4555443 3 289999
Q ss_pred cCCCCH
Q 043706 557 VSNGCL 562 (586)
Q Consensus 557 ~~~GsL 562 (586)
+++..|
T Consensus 132 i~G~~l 137 (379)
T 3feg_A 132 IPSRPL 137 (379)
T ss_dssp CSEEEC
T ss_pred ecCccC
Confidence 997654
No 450
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.83 E-value=90 Score=24.39 Aligned_cols=42 Identities=14% Similarity=0.025 Sum_probs=20.3
Q ss_pred cCccccCCCCCCCEEEccCCCCCCCCCccccCCCCCcEEEeeC
Q 043706 103 SVTKDLGLIQHLRHLDLSNNFFNGSLPLSIFSATELQVLSLSN 145 (586)
Q Consensus 103 ~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 145 (586)
.-...|.+++.|+.+.|-.+ ++.+-..+|.+|.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33345555555555555443 2223334455555555555543
No 451
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=33.62 E-value=70 Score=31.20 Aligned_cols=68 Identities=9% Similarity=-0.023 Sum_probs=41.5
Q ss_pred ecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccC---CCCccceeEE------EEeCCeEEEEEeccC
Q 043706 488 CTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLK---HPNLVKLRGF------YWEDEEKLLIHDYVS 558 (586)
Q Consensus 488 g~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~---H~niv~l~g~------~~~~~~~~lv~ey~~ 558 (586)
|.|....||+....+| .+++|+...... ..|+.++..+. -+.+.+.+.. +...+..++||||++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 3344678999988777 899998765442 23344443332 1113344322 233567899999999
Q ss_pred CCCH
Q 043706 559 NGCL 562 (586)
Q Consensus 559 ~GsL 562 (586)
+..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.19 E-value=71 Score=25.03 Aligned_cols=46 Identities=15% Similarity=0.051 Sum_probs=24.8
Q ss_pred CCCCCCCccccCCCCCcEEEeeCCCCCCCCccccCCCCCCcEEEccC
Q 043706 123 FFNGSLPLSIFSATELQVLSLSNNAISGELPDLIGQIPRLQLLNLSV 169 (586)
Q Consensus 123 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 169 (586)
.++.+-..+|.++.+|+.+.|..+ ++..-...|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444455666666666666544 3333344555666666655543
No 453
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=28.54 E-value=92 Score=32.02 Aligned_cols=72 Identities=19% Similarity=0.211 Sum_probs=45.9
Q ss_pred eeecCCceEEEEEEeCC-CcEEEEEEecccchhhHHHHHHHHHHHHccCCCCcc-ceeEEEEeCCeEEEEEeccCCCCH
Q 043706 486 ILCTSSSSIVYKAVLAD-GTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLV-KLRGFYWEDEEKLLIHDYVSNGCL 562 (586)
Q Consensus 486 ~lg~g~~g~vy~~~~~~-g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~~~GsL 562 (586)
.|+.|-...+|+...++ +..+.+|+........ -+..+|..++..+...+++ ++++++ .+ .+||||+++-+|
T Consensus 115 ~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 115 IINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 57777788899998865 5778888875432110 1125788888888766664 566655 22 259999997544
No 454
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=26.68 E-value=50 Score=31.47 Aligned_cols=70 Identities=11% Similarity=0.192 Sum_probs=41.4
Q ss_pred ceeecCCceEEEEEEeCCCcEEEEEEecccchhhHHHHHHHHHHHHccCCCCcc-ceeEEEEeCCeEEEEEecc-CCCCH
Q 043706 485 YILCTSSSSIVYKAVLADGTTLAVRRIGETCFERLKDLESQVKAIAKLKHPNLV-KLRGFYWEDEEKLLIHDYV-SNGCL 562 (586)
Q Consensus 485 ~~lg~g~~g~vy~~~~~~g~~vavK~l~~~~~~~~~~f~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~-~~GsL 562 (586)
..|+.|....+|+. ..+.+|+........ -+..+|..++..+....+. +++++ ..+.-++|+||+ ++-++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 35778888899998 458888876532111 1134577777666443444 44443 344457899999 54443
Done!