Query 043707
Match_columns 347
No_of_seqs 530 out of 3156
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 12:52:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 2.3E-32 7.8E-37 246.3 26.5 192 119-347 123-323 (344)
2 3ow8_A WD repeat-containing pr 100.0 4.7E-32 1.6E-36 241.9 28.2 227 115-347 24-271 (321)
3 1vyh_C Platelet-activating fac 100.0 6.3E-32 2.1E-36 249.2 28.1 241 101-347 115-403 (410)
4 4gqb_B Methylosome protein 50; 100.0 2.4E-32 8E-37 246.2 24.4 190 120-347 79-281 (344)
5 2pm7_B Protein transport prote 100.0 4.1E-31 1.4E-35 233.2 29.9 231 116-347 2-277 (297)
6 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.3E-32 2.8E-36 242.7 25.8 200 114-347 6-217 (345)
7 2ynn_A Coatomer subunit beta'; 100.0 6.4E-31 2.2E-35 232.7 30.3 227 115-347 47-295 (304)
8 3ow8_A WD repeat-containing pr 100.0 4.4E-31 1.5E-35 235.6 29.1 226 116-347 73-313 (321)
9 2hes_X YDR267CP; beta-propelle 100.0 3.2E-31 1.1E-35 237.4 28.0 205 114-347 5-222 (330)
10 2ynn_A Coatomer subunit beta'; 100.0 9.9E-31 3.4E-35 231.5 29.6 228 114-347 4-251 (304)
11 3frx_A Guanine nucleotide-bind 100.0 2.8E-31 9.5E-36 236.7 25.7 194 115-347 9-219 (319)
12 1got_B GT-beta; complex (GTP-b 100.0 4.7E-31 1.6E-35 237.2 27.4 209 101-347 104-335 (340)
13 4g56_B MGC81050 protein; prote 100.0 8E-31 2.7E-35 237.4 27.4 241 100-347 48-335 (357)
14 1got_B GT-beta; complex (GTP-b 100.0 2.9E-30 9.8E-35 232.1 30.7 230 114-347 46-293 (340)
15 2xzm_R RACK1; ribosome, transl 100.0 1.2E-30 4.1E-35 234.8 26.7 195 113-347 11-236 (343)
16 1vyh_C Platelet-activating fac 100.0 8E-31 2.7E-35 241.8 25.9 194 116-347 101-319 (410)
17 2pbi_B Guanine nucleotide-bind 100.0 2E-30 6.8E-35 234.6 27.7 195 115-347 146-349 (354)
18 3fm0_A Protein CIAO1; WDR39,SG 100.0 9.9E-30 3.4E-34 229.1 31.4 228 120-347 58-327 (345)
19 4ery_A WD repeat-containing pr 100.0 4.7E-30 1.6E-34 227.5 28.2 197 114-347 14-215 (312)
20 3bg1_A Protein SEC13 homolog; 100.0 1.2E-30 4.3E-35 232.1 22.4 228 118-347 8-285 (316)
21 4aow_A Guanine nucleotide-bind 100.0 2.3E-29 7.7E-34 224.9 30.7 234 114-347 29-329 (340)
22 2pbi_B Guanine nucleotide-bind 100.0 1.1E-29 3.8E-34 229.7 28.7 202 114-347 55-263 (354)
23 1erj_A Transcriptional repress 100.0 1.9E-29 6.4E-34 231.3 28.3 217 125-347 125-381 (393)
24 1nr0_A Actin interacting prote 100.0 3.6E-29 1.2E-33 242.2 31.5 249 99-347 23-347 (611)
25 3iz6_a 40S ribosomal protein R 100.0 9.5E-30 3.3E-34 232.2 24.5 227 115-347 58-321 (380)
26 3iz6_a 40S ribosomal protein R 100.0 8.4E-30 2.9E-34 232.6 23.7 241 74-347 83-367 (380)
27 3zwl_B Eukaryotic translation 100.0 2E-28 6.8E-33 220.8 32.4 244 104-347 13-338 (369)
28 2hes_X YDR267CP; beta-propelle 100.0 8.6E-30 2.9E-34 228.1 23.0 200 115-347 99-320 (330)
29 2xzm_R RACK1; ribosome, transl 100.0 5.5E-29 1.9E-33 223.9 27.7 231 114-347 67-332 (343)
30 3frx_A Guanine nucleotide-bind 100.0 5E-29 1.7E-33 222.0 26.8 192 115-346 57-259 (319)
31 2ymu_A WD-40 repeat protein; u 100.0 2.4E-29 8.2E-34 241.2 25.6 206 101-347 351-572 (577)
32 4e54_B DNA damage-binding prot 100.0 5.7E-30 2E-34 237.8 20.0 199 115-347 111-319 (435)
33 3f3f_A Nucleoporin SEH1; struc 100.0 7.4E-29 2.5E-33 221.2 25.5 231 117-347 5-329 (351)
34 3dwl_C Actin-related protein 2 100.0 1.3E-29 4.5E-34 230.2 20.1 201 114-346 46-273 (377)
35 3jrp_A Fusion protein of prote 100.0 1E-28 3.6E-33 223.6 24.6 201 115-347 3-232 (379)
36 3jrp_A Fusion protein of prote 100.0 2.7E-28 9.2E-33 220.9 26.7 202 115-347 47-279 (379)
37 1nr0_A Actin interacting prote 100.0 5.4E-28 1.9E-32 234.0 29.2 213 128-347 25-262 (611)
38 3dm0_A Maltose-binding peripla 100.0 2.1E-28 7.1E-33 240.4 26.6 195 115-347 374-584 (694)
39 4ery_A WD repeat-containing pr 100.0 2.1E-27 7.2E-32 210.4 30.5 228 114-347 56-304 (312)
40 1sq9_A Antiviral protein SKI8; 100.0 5.3E-28 1.8E-32 220.9 26.3 227 114-347 7-314 (397)
41 2j04_B YDR362CP, TAU91; beta p 100.0 6E-29 2.1E-33 235.4 20.0 193 117-347 201-420 (524)
42 4g56_B MGC81050 protein; prote 100.0 4.5E-28 1.5E-32 219.4 24.4 194 121-347 40-250 (357)
43 3mmy_A MRNA export factor; mRN 100.0 4.5E-28 1.5E-32 218.3 23.6 195 114-347 30-338 (368)
44 3dwl_C Actin-related protein 2 100.0 5.8E-29 2E-33 226.0 17.2 197 120-347 8-228 (377)
45 3ei3_B DNA damage-binding prot 100.0 1.6E-27 5.3E-32 217.2 26.1 201 113-347 63-274 (383)
46 1k8k_C P40, ARP2/3 complex 41 100.0 3.4E-27 1.2E-31 213.4 27.1 221 119-346 4-265 (372)
47 1erj_A Transcriptional repress 100.0 2.8E-27 9.4E-32 216.9 26.3 227 120-347 61-333 (393)
48 4a11_B DNA excision repair pro 100.0 6.1E-27 2.1E-31 214.0 27.6 234 114-347 34-357 (408)
49 1k8k_C P40, ARP2/3 complex 41 100.0 5.5E-27 1.9E-31 212.0 26.9 233 115-347 44-353 (372)
50 3gre_A Serine/threonine-protei 100.0 1.7E-27 5.7E-32 220.8 23.8 234 113-347 52-351 (437)
51 2aq5_A Coronin-1A; WD40 repeat 100.0 2.7E-27 9.1E-32 217.4 24.5 198 115-347 73-291 (402)
52 4aez_A CDC20, WD repeat-contai 100.0 3.7E-27 1.3E-31 216.5 25.1 212 99-347 139-372 (401)
53 4gq1_A NUP37; propeller, trans 100.0 5.3E-28 1.8E-32 221.7 19.4 219 116-347 129-382 (393)
54 3odt_A Protein DOA1; ubiquitin 100.0 4.1E-27 1.4E-31 207.6 24.3 192 115-347 96-288 (313)
55 4h5i_A Guanine nucleotide-exch 100.0 1.1E-27 3.9E-32 217.3 21.0 183 127-347 139-335 (365)
56 1gxr_A ESG1, transducin-like e 100.0 2.3E-26 7.9E-31 204.8 28.0 192 118-347 46-247 (337)
57 1r5m_A SIR4-interacting protei 100.0 9.5E-27 3.3E-31 213.7 25.9 220 122-347 107-353 (425)
58 3vl1_A 26S proteasome regulato 100.0 8.9E-27 3.1E-31 214.5 25.6 232 115-346 131-410 (420)
59 3i2n_A WD repeat-containing pr 100.0 4.2E-27 1.4E-31 211.4 22.8 228 120-347 62-345 (357)
60 2j04_B YDR362CP, TAU91; beta p 100.0 7.3E-28 2.5E-32 228.0 18.5 199 117-347 260-509 (524)
61 3vl1_A 26S proteasome regulato 100.0 3.8E-27 1.3E-31 217.0 22.5 182 129-347 105-314 (420)
62 2ymu_A WD-40 repeat protein; u 100.0 3.4E-26 1.2E-30 219.2 30.0 236 101-347 269-531 (577)
63 3jro_A Fusion protein of prote 100.0 7.5E-27 2.6E-31 231.2 25.2 231 116-347 2-277 (753)
64 2xyi_A Probable histone-bindin 100.0 3.1E-26 1.1E-30 212.4 27.7 232 116-347 121-402 (430)
65 3odt_A Protein DOA1; ubiquitin 100.0 6.5E-26 2.2E-30 199.9 28.3 225 113-347 8-247 (313)
66 3dm0_A Maltose-binding peripla 100.0 1.5E-26 5.2E-31 227.1 25.9 196 115-346 422-624 (694)
67 1sq9_A Antiviral protein SKI8; 100.0 3.9E-26 1.3E-30 208.5 27.0 226 115-347 54-387 (397)
68 1r5m_A SIR4-interacting protei 100.0 6.1E-26 2.1E-30 208.4 27.8 215 100-347 114-417 (425)
69 4gga_A P55CDC, cell division c 100.0 3.2E-26 1.1E-30 211.6 25.4 214 99-347 152-387 (420)
70 3k26_A Polycomb protein EED; W 100.0 3.4E-26 1.2E-30 206.0 24.7 222 122-347 68-358 (366)
71 3v7d_B Cell division control p 99.9 9.8E-26 3.3E-30 210.5 28.4 222 115-347 113-373 (464)
72 2pm9_A Protein WEB1, protein t 99.9 1.7E-26 5.7E-31 212.2 22.5 198 121-347 65-286 (416)
73 3dw8_B Serine/threonine-protei 99.9 2.9E-26 1E-30 212.6 23.8 218 121-347 26-365 (447)
74 1gxr_A ESG1, transducin-like e 99.9 1.7E-25 5.7E-30 199.2 27.4 192 115-347 133-329 (337)
75 1yfq_A Cell cycle arrest prote 99.9 9.4E-26 3.2E-30 201.7 25.2 221 116-347 49-315 (342)
76 2pm9_A Protein WEB1, protein t 99.9 1.3E-26 4.5E-31 212.8 17.9 201 115-347 105-329 (416)
77 1p22_A F-BOX/WD-repeat protein 99.9 3.5E-25 1.2E-29 205.4 26.6 191 115-347 165-357 (435)
78 3f3f_A Nucleoporin SEH1; struc 99.9 2.1E-25 7.1E-30 198.8 24.1 195 115-309 49-339 (351)
79 2pm7_B Protein transport prote 99.9 5.7E-25 1.9E-29 193.7 26.2 195 114-308 44-286 (297)
80 2oaj_A Protein SNI1; WD40 repe 99.9 1E-25 3.5E-30 226.6 23.7 194 118-347 12-234 (902)
81 3mkq_A Coatomer beta'-subunit; 99.9 3.2E-25 1.1E-29 220.9 26.9 228 114-347 4-251 (814)
82 3k26_A Polycomb protein EED; W 99.9 2.6E-25 8.8E-30 200.3 23.8 190 118-347 13-252 (366)
83 3lrv_A PRE-mRNA-splicing facto 99.9 6.9E-26 2.4E-30 203.6 19.7 187 124-346 77-283 (343)
84 4aez_A CDC20, WD repeat-contai 99.9 8.9E-25 3E-29 200.6 27.3 191 116-346 126-327 (401)
85 2aq5_A Coronin-1A; WD40 repeat 99.9 3.4E-25 1.1E-29 203.3 23.8 187 129-346 40-245 (402)
86 3vu4_A KMHSV2; beta-propeller 99.9 4.3E-25 1.5E-29 199.6 23.3 232 115-347 11-328 (355)
87 3bg1_A Protein SEC13 homolog; 99.9 6.9E-25 2.3E-29 195.0 24.1 193 115-307 49-293 (316)
88 3v7d_B Cell division control p 99.9 2.2E-24 7.5E-29 201.4 28.7 224 114-346 153-412 (464)
89 1yfq_A Cell cycle arrest prote 99.9 4E-25 1.4E-29 197.6 22.4 228 117-347 5-274 (342)
90 2j04_A TAU60, YPL007P, hypothe 99.9 1.7E-25 6E-30 208.6 20.4 193 121-347 83-290 (588)
91 1pgu_A Actin interacting prote 99.9 2E-25 6.7E-30 215.1 21.4 222 114-347 330-606 (615)
92 1p22_A F-BOX/WD-repeat protein 99.9 4.7E-25 1.6E-29 204.6 22.9 195 114-347 204-406 (435)
93 3mkq_A Coatomer beta'-subunit; 99.9 2.7E-24 9.3E-29 214.2 29.7 227 114-346 46-294 (814)
94 2w18_A PALB2, fancn, partner a 99.9 4E-25 1.4E-29 194.3 20.7 191 120-347 133-349 (356)
95 3sfz_A APAF-1, apoptotic pepti 99.9 1.8E-24 6.1E-29 225.1 28.9 226 116-347 608-905 (1249)
96 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.8E-24 6E-29 201.2 25.9 230 112-347 188-430 (445)
97 3ei3_B DNA damage-binding prot 99.9 3.7E-25 1.3E-29 201.5 20.6 195 115-346 152-373 (383)
98 4ggc_A P55CDC, cell division c 99.9 1.8E-24 6.1E-29 191.2 24.4 213 100-347 73-307 (318)
99 1pgu_A Actin interacting prote 99.9 2E-24 6.7E-29 208.1 26.3 219 121-347 16-275 (615)
100 3i2n_A WD repeat-containing pr 99.9 1.9E-24 6.6E-29 194.0 23.2 194 116-347 11-235 (357)
101 3gre_A Serine/threonine-protei 99.9 2.3E-25 7.8E-30 206.5 17.5 195 122-347 167-432 (437)
102 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.4E-24 1.5E-28 198.5 25.9 220 115-347 110-340 (445)
103 3dw8_B Serine/threonine-protei 99.9 1.4E-24 4.6E-29 201.4 21.6 208 119-346 173-438 (447)
104 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.9E-24 1E-28 200.1 23.6 199 119-346 98-330 (450)
105 3sfz_A APAF-1, apoptotic pepti 99.9 2.7E-24 9.3E-29 223.7 25.7 208 99-306 662-912 (1249)
106 4e54_B DNA damage-binding prot 99.9 4.7E-25 1.6E-29 204.7 17.8 189 116-343 157-363 (435)
107 3lrv_A PRE-mRNA-splicing facto 99.9 7.9E-25 2.7E-29 196.7 17.1 183 131-345 46-235 (343)
108 4h5i_A Guanine nucleotide-exch 99.9 2.5E-24 8.6E-29 195.3 20.5 177 101-307 140-343 (365)
109 2oaj_A Protein SNI1; WD40 repe 99.9 2.3E-24 7.9E-29 216.8 20.9 204 122-347 341-653 (902)
110 2j04_A TAU60, YPL007P, hypothe 99.9 3.1E-24 1.1E-28 200.2 16.1 199 100-346 21-245 (588)
111 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.3E-22 4.4E-27 189.0 26.9 208 100-343 108-373 (450)
112 4aow_A Guanine nucleotide-bind 99.9 5.9E-23 2E-27 183.1 20.5 161 154-347 31-238 (340)
113 2w18_A PALB2, fancn, partner a 99.9 3.2E-23 1.1E-27 182.2 18.2 162 115-305 170-355 (356)
114 4gq1_A NUP37; propeller, trans 99.9 6E-24 2E-28 194.7 13.4 147 131-309 99-288 (393)
115 3jro_A Fusion protein of prote 99.9 1.8E-22 6.3E-27 199.7 21.1 193 115-307 45-285 (753)
116 4gga_A P55CDC, cell division c 99.9 3.1E-21 1.1E-25 178.1 26.3 187 120-346 144-344 (420)
117 4ggc_A P55CDC, cell division c 99.9 2.7E-21 9.2E-26 170.7 24.4 212 127-346 29-264 (318)
118 4a11_B DNA excision repair pro 99.9 3E-21 1E-25 176.1 24.3 205 143-347 23-268 (408)
119 3mmy_A MRNA export factor; mRN 99.9 1.9E-21 6.6E-26 174.8 21.6 190 117-306 80-345 (368)
120 3zwl_B Eukaryotic translation 99.9 9.4E-21 3.2E-25 170.4 23.9 159 116-307 166-346 (369)
121 2xyi_A Probable histone-bindin 99.9 5.9E-21 2E-25 176.8 22.6 161 116-307 224-410 (430)
122 2oit_A Nucleoporin 214KDA; NH2 99.9 1.3E-21 4.4E-26 181.4 17.2 193 125-341 40-257 (434)
123 3vu4_A KMHSV2; beta-propeller 99.9 2.2E-21 7.5E-26 175.2 17.6 188 152-347 10-263 (355)
124 3bws_A Protein LP49; two-domai 99.9 1.1E-19 3.6E-24 167.9 25.3 220 119-346 165-423 (433)
125 1l0q_A Surface layer protein; 99.8 6.9E-19 2.4E-23 160.2 26.2 188 114-344 23-219 (391)
126 2oit_A Nucleoporin 214KDA; NH2 99.8 6.2E-20 2.1E-24 170.1 19.2 192 121-345 90-322 (434)
127 1l0q_A Surface layer protein; 99.8 2.5E-18 8.5E-23 156.5 27.1 189 115-346 66-266 (391)
128 2hqs_A Protein TOLB; TOLB, PAL 99.8 1E-18 3.4E-23 161.1 24.1 191 114-346 169-375 (415)
129 2hqs_A Protein TOLB; TOLB, PAL 99.8 3.2E-19 1.1E-23 164.4 20.3 172 133-345 143-331 (415)
130 3bws_A Protein LP49; two-domai 99.8 1.5E-18 5.3E-23 160.0 23.4 221 116-345 116-365 (433)
131 2ojh_A Uncharacterized protein 99.8 2.9E-17 9.8E-22 142.7 21.3 195 113-345 31-237 (297)
132 1nir_A Nitrite reductase; hemo 99.8 1.5E-16 5.1E-21 151.4 26.2 227 115-343 171-439 (543)
133 2ojh_A Uncharacterized protein 99.7 6E-17 2.1E-21 140.6 17.3 187 124-346 85-293 (297)
134 1nir_A Nitrite reductase; hemo 99.7 6.7E-17 2.3E-21 153.8 18.8 179 126-343 142-342 (543)
135 1k32_A Tricorn protease; prote 99.7 1.6E-15 5.4E-20 155.3 23.1 220 116-346 238-493 (1045)
136 1ri6_A Putative isomerase YBHE 99.7 9.8E-16 3.4E-20 136.2 18.6 180 135-346 7-200 (343)
137 1xfd_A DIP, dipeptidyl aminope 99.7 2E-16 6.8E-21 155.6 15.0 182 131-344 26-274 (723)
138 1ri6_A Putative isomerase YBHE 99.7 1.1E-14 3.9E-19 129.3 24.5 220 121-344 35-296 (343)
139 3u4y_A Uncharacterized protein 99.7 7.4E-15 2.5E-19 130.3 22.8 230 116-346 33-294 (331)
140 3scy_A Hypothetical bacterial 99.7 2E-14 6.9E-19 129.4 25.5 196 122-345 98-326 (361)
141 3vgz_A Uncharacterized protein 99.7 1.1E-14 3.7E-19 130.2 23.4 183 126-345 143-334 (353)
142 2ecf_A Dipeptidyl peptidase IV 99.7 1.4E-15 4.6E-20 150.1 18.2 177 128-344 43-305 (741)
143 3o4h_A Acylamino-acid-releasin 99.7 1.2E-15 4E-20 146.6 16.8 213 123-346 21-267 (582)
144 3u4y_A Uncharacterized protein 99.7 2E-14 6.7E-19 127.6 23.5 175 133-343 10-194 (331)
145 1xfd_A DIP, dipeptidyl aminope 99.7 2E-15 6.9E-20 148.4 18.2 187 126-342 63-323 (723)
146 3hfq_A Uncharacterized protein 99.7 2E-14 6.8E-19 128.6 23.2 194 120-345 82-306 (347)
147 3vgz_A Uncharacterized protein 99.6 3.4E-14 1.2E-18 127.0 21.9 196 124-345 41-251 (353)
148 1pby_B Quinohemoprotein amine 99.6 3.5E-14 1.2E-18 125.8 21.3 202 134-346 2-301 (337)
149 2z3z_A Dipeptidyl aminopeptida 99.6 5.3E-15 1.8E-19 145.1 17.4 193 117-345 114-376 (706)
150 2ecf_A Dipeptidyl peptidase IV 99.6 1.4E-14 4.8E-19 142.8 19.7 207 128-343 115-398 (741)
151 1k32_A Tricorn protease; prote 99.6 9.1E-15 3.1E-19 149.7 18.4 219 114-345 194-441 (1045)
152 3o4h_A Acylamino-acid-releasin 99.6 6.6E-15 2.3E-19 141.3 16.3 173 126-346 114-303 (582)
153 3hfq_A Uncharacterized protein 99.6 6.9E-14 2.4E-18 125.1 21.4 193 127-343 45-258 (347)
154 1jmx_B Amine dehydrogenase; ox 99.6 6.4E-14 2.2E-18 124.8 20.2 178 127-346 48-316 (349)
155 2z3z_A Dipeptidyl aminopeptida 99.6 1.2E-14 4.1E-19 142.6 16.2 200 124-347 82-334 (706)
156 1z68_A Fibroblast activation p 99.6 5.2E-15 1.8E-19 145.5 12.8 180 128-342 22-270 (719)
157 3e5z_A Putative gluconolactona 99.6 1.4E-12 4.9E-17 114.0 25.4 224 113-346 17-278 (296)
158 1z68_A Fibroblast activation p 99.5 3.8E-14 1.3E-18 139.3 13.5 190 127-346 65-335 (719)
159 1jof_A Carboxy-CIS,CIS-muconat 99.5 5.4E-13 1.8E-17 120.5 18.2 189 127-344 45-274 (365)
160 4a5s_A Dipeptidyl peptidase 4 99.5 4.6E-13 1.6E-17 132.2 18.9 193 127-343 67-338 (740)
161 1xip_A Nucleoporin NUP159; bet 99.5 9.1E-13 3.1E-17 118.9 18.9 171 127-341 43-230 (388)
162 3scy_A Hypothetical bacterial 99.5 3.7E-12 1.3E-16 114.5 22.8 174 128-333 161-360 (361)
163 3azo_A Aminopeptidase; POP fam 99.5 6.5E-13 2.2E-17 129.3 18.4 176 131-344 88-313 (662)
164 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.4E-12 4.7E-17 117.8 18.9 175 141-345 117-330 (365)
165 1jmx_B Amine dehydrogenase; ox 99.5 5.6E-13 1.9E-17 118.7 14.8 152 129-309 7-177 (349)
166 1pby_B Quinohemoprotein amine 99.5 7.4E-12 2.5E-16 110.7 21.8 176 128-309 88-312 (337)
167 2oiz_A Aromatic amine dehydrog 99.5 1.1E-11 3.9E-16 111.7 23.2 217 114-337 42-360 (361)
168 4a5s_A Dipeptidyl peptidase 4 99.5 7E-13 2.4E-17 130.9 15.6 178 129-342 24-277 (740)
169 3pe7_A Oligogalacturonate lyas 99.4 7.2E-12 2.4E-16 113.5 17.8 190 114-343 21-256 (388)
170 3azo_A Aminopeptidase; POP fam 99.4 6E-12 2E-16 122.4 17.5 179 122-335 128-347 (662)
171 2dg1_A DRP35, lactonase; beta 99.4 9.3E-10 3.2E-14 97.5 29.0 227 115-345 36-300 (333)
172 3fvz_A Peptidyl-glycine alpha- 99.4 7.5E-10 2.6E-14 98.3 28.4 215 125-346 25-313 (329)
173 1q7f_A NHL, brain tumor CG1071 99.4 1.4E-10 4.7E-15 100.6 22.4 182 124-345 30-227 (286)
174 1q7f_A NHL, brain tumor CG1071 99.4 1.3E-10 4.4E-15 100.8 21.8 183 124-346 77-271 (286)
175 2gop_A Trilobed protease; beta 99.3 4.6E-10 1.6E-14 99.9 19.5 201 128-346 65-321 (347)
176 2gop_A Trilobed protease; beta 99.3 2.1E-10 7.2E-15 102.2 17.0 164 132-345 23-235 (347)
177 1rwi_B Serine/threonine-protei 99.2 1.4E-09 4.9E-14 93.1 21.1 182 126-346 69-255 (270)
178 3no2_A Uncharacterized protein 99.2 4.7E-10 1.6E-14 97.2 17.6 171 133-346 5-186 (276)
179 1xip_A Nucleoporin NUP159; bet 99.2 8.4E-11 2.9E-15 106.1 12.6 145 163-347 39-183 (388)
180 2dg1_A DRP35, lactonase; beta 99.2 2.1E-10 7.3E-15 101.6 15.1 168 135-342 19-199 (333)
181 1qks_A Cytochrome CD1 nitrite 99.2 2.3E-09 7.8E-14 102.1 21.9 176 129-343 163-360 (567)
182 3pe7_A Oligogalacturonate lyas 99.2 2.6E-10 9E-15 103.1 14.3 154 153-345 22-209 (388)
183 3g4e_A Regucalcin; six bladed 99.2 1.8E-08 6.1E-13 88.0 25.5 204 133-344 25-261 (297)
184 1qks_A Cytochrome CD1 nitrite 99.2 1.6E-08 5.3E-13 96.3 26.3 227 115-343 189-458 (567)
185 3c5m_A Oligogalacturonate lyas 99.2 3.9E-10 1.3E-14 102.0 14.5 205 129-343 43-301 (396)
186 1rwi_B Serine/threonine-protei 99.2 2.5E-09 8.4E-14 91.6 18.7 180 128-346 30-213 (270)
187 2xdw_A Prolyl endopeptidase; a 99.1 1.8E-09 6.3E-14 105.9 18.9 186 128-346 131-357 (710)
188 2bkl_A Prolyl endopeptidase; m 99.1 1.6E-09 5.3E-14 106.2 18.1 191 122-346 119-340 (695)
189 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.2E-08 4E-13 89.3 22.0 206 131-344 27-287 (314)
190 3dsm_A Uncharacterized protein 99.1 1.6E-08 5.5E-13 89.7 22.9 210 126-342 46-285 (328)
191 2xdw_A Prolyl endopeptidase; a 99.1 1E-08 3.5E-13 100.6 23.6 177 128-342 177-397 (710)
192 3fvz_A Peptidyl-glycine alpha- 99.1 1.7E-09 5.9E-14 95.9 16.5 153 125-307 144-322 (329)
193 2z2n_A Virginiamycin B lyase; 99.1 2.8E-08 9.4E-13 86.1 23.7 182 124-344 57-244 (299)
194 3c5m_A Oligogalacturonate lyas 99.1 3.4E-09 1.2E-13 95.8 18.3 163 141-345 166-371 (396)
195 2z2n_A Virginiamycin B lyase; 99.1 6.7E-08 2.3E-12 83.6 25.3 184 122-344 13-202 (299)
196 2ghs_A AGR_C_1268P; regucalcin 99.1 1.1E-07 3.6E-12 84.3 26.4 206 128-344 55-291 (326)
197 3dr2_A Exported gluconolactona 99.1 3.6E-08 1.2E-12 86.4 21.5 218 116-346 37-298 (305)
198 2bkl_A Prolyl endopeptidase; m 99.0 6.3E-09 2.2E-13 101.9 17.8 175 128-341 174-379 (695)
199 2oiz_A Aromatic amine dehydrog 99.0 6.5E-09 2.2E-13 93.5 16.0 137 141-307 29-182 (361)
200 3no2_A Uncharacterized protein 99.0 5E-08 1.7E-12 84.3 20.8 195 115-342 27-230 (276)
201 3e5z_A Putative gluconolactona 99.0 1.5E-08 5.1E-13 88.2 16.5 150 154-345 20-192 (296)
202 2qc5_A Streptogramin B lactona 98.9 5.9E-07 2E-11 77.6 24.1 182 124-344 62-249 (300)
203 2qc5_A Streptogramin B lactona 98.9 8.6E-07 2.9E-11 76.6 24.1 182 124-344 20-207 (300)
204 1yr2_A Prolyl oligopeptidase; 98.9 4.1E-08 1.4E-12 96.8 17.4 184 128-346 169-384 (741)
205 3hrp_A Uncharacterized protein 98.9 1.4E-06 4.9E-11 79.5 24.8 208 126-344 133-399 (409)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 98.8 1.9E-07 6.4E-12 81.6 17.5 157 126-309 119-301 (314)
207 2mad_H Methylamine dehydrogena 98.8 3.3E-06 1.1E-10 76.2 25.8 221 115-343 59-337 (373)
208 1yr2_A Prolyl oligopeptidase; 98.8 5.9E-07 2E-11 88.6 20.4 172 131-340 218-422 (741)
209 3g4e_A Regucalcin; six bladed 98.7 1.1E-06 3.8E-11 76.5 18.7 119 144-289 131-253 (297)
210 3dsm_A Uncharacterized protein 98.7 1.3E-06 4.4E-11 77.3 18.5 192 141-343 15-243 (328)
211 2hz6_A Endoplasmic reticulum t 98.7 6.6E-08 2.3E-12 87.2 9.1 173 131-309 7-194 (369)
212 3iuj_A Prolyl endopeptidase; h 98.6 5.7E-07 1.9E-11 88.0 16.0 182 128-344 135-345 (693)
213 3hrp_A Uncharacterized protein 98.6 1.1E-05 3.9E-10 73.5 22.2 178 127-305 176-408 (409)
214 3sjl_D Methylamine dehydrogena 98.6 3.6E-06 1.2E-10 75.7 17.5 148 131-309 42-210 (386)
215 2qe8_A Uncharacterized protein 98.5 3.5E-06 1.2E-10 74.9 17.0 157 162-346 17-216 (343)
216 3sjl_D Methylamine dehydrogena 98.5 4.1E-06 1.4E-10 75.2 17.3 221 114-342 70-349 (386)
217 2qe8_A Uncharacterized protein 98.5 1.1E-05 3.6E-10 71.8 19.5 196 124-345 17-268 (343)
218 2mad_H Methylamine dehydrogena 98.5 2.2E-05 7.5E-10 70.7 21.6 132 144-308 48-196 (373)
219 3iuj_A Prolyl endopeptidase; h 98.5 8.3E-07 2.8E-11 86.8 12.6 142 160-341 127-296 (693)
220 2ece_A 462AA long hypothetical 98.5 1E-05 3.5E-10 73.5 18.3 181 133-344 95-340 (462)
221 1mda_H Methylamine dehydrogena 98.4 6.9E-06 2.4E-10 73.6 16.3 193 113-309 56-348 (368)
222 3nok_A Glutaminyl cyclase; bet 98.4 3.9E-05 1.3E-09 64.7 19.8 191 114-343 44-253 (268)
223 1yiq_A Quinohemoprotein alcoho 98.4 1.2E-05 4.1E-10 78.4 19.0 81 256-342 454-536 (689)
224 2iwa_A Glutamine cyclotransfer 98.4 5.8E-05 2E-09 64.2 19.6 100 243-344 112-225 (266)
225 3c75_H MADH, methylamine dehyd 98.4 1.7E-05 5.8E-10 72.4 17.3 195 114-309 110-404 (426)
226 3dr2_A Exported gluconolactona 98.4 1.5E-05 5E-10 69.5 16.0 146 157-345 40-208 (305)
227 3nol_A Glutamine cyclotransfer 98.3 3.9E-05 1.3E-09 64.7 17.4 98 245-344 134-244 (262)
228 2ghs_A AGR_C_1268P; regucalcin 98.3 4.3E-05 1.5E-09 67.3 18.8 144 125-297 135-293 (326)
229 2ece_A 462AA long hypothetical 98.3 3.1E-05 1.1E-09 70.4 17.9 179 131-343 147-399 (462)
230 2p4o_A Hypothetical protein; p 98.2 0.00098 3.4E-08 57.9 25.1 209 129-345 39-278 (306)
231 3c75_H MADH, methylamine dehyd 98.2 4.6E-05 1.6E-09 69.5 17.0 145 131-306 82-247 (426)
232 3hxj_A Pyrrolo-quinoline quino 98.2 2.3E-05 7.8E-10 68.6 14.4 200 133-347 107-316 (330)
233 3mbr_X Glutamine cyclotransfer 98.2 0.00028 9.6E-09 58.9 19.9 98 245-344 112-223 (243)
234 1kb0_A Quinohemoprotein alcoho 98.2 7.2E-05 2.5E-09 72.8 17.9 78 257-341 457-536 (677)
235 3hxj_A Pyrrolo-quinoline quino 98.1 2.9E-05 1E-09 67.9 13.2 172 125-305 61-242 (330)
236 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.00038 1.3E-08 62.2 20.5 172 133-309 143-339 (376)
237 2hz6_A Endoplasmic reticulum t 98.1 2.6E-07 8.9E-12 83.3 -0.8 131 172-346 8-140 (369)
238 2fp8_A Strictosidine synthase; 98.1 0.001 3.5E-08 58.2 21.5 180 128-342 25-246 (322)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.00015 5E-09 65.0 16.2 138 133-305 239-376 (376)
240 1npe_A Nidogen, entactin; glyc 98.0 0.00093 3.2E-08 56.7 19.8 145 162-344 36-186 (267)
241 1fwx_A Nitrous oxide reductase 98.0 3.8E-05 1.3E-09 72.3 11.6 201 131-343 145-406 (595)
242 2iwa_A Glutamine cyclotransfer 98.0 0.00035 1.2E-08 59.4 16.4 151 128-308 70-238 (266)
243 1kb0_A Quinohemoprotein alcoho 98.0 9.1E-05 3.1E-09 72.1 14.3 72 235-306 476-566 (677)
244 3qqz_A Putative uncharacterize 97.9 0.0051 1.8E-07 51.8 22.0 200 118-341 21-240 (255)
245 4a2l_A BT_4663, two-component 97.8 0.0048 1.7E-07 61.0 23.8 192 124-346 310-518 (795)
246 2xe4_A Oligopeptidase B; hydro 97.8 0.00057 2E-08 67.3 16.1 150 127-306 179-353 (751)
247 1yiq_A Quinohemoprotein alcoho 97.8 0.00026 8.8E-09 69.0 13.3 54 241-294 480-536 (689)
248 1npe_A Nidogen, entactin; glyc 97.8 0.014 4.9E-07 49.2 23.4 150 125-307 37-198 (267)
249 1fwx_A Nitrous oxide reductase 97.7 0.0015 5.3E-08 61.4 17.4 201 132-342 100-347 (595)
250 4a2l_A BT_4663, two-component 97.7 0.014 4.8E-07 57.7 24.8 187 124-343 357-561 (795)
251 3nol_A Glutamine cyclotransfer 97.6 0.0024 8.1E-08 53.8 15.1 135 129-295 92-243 (262)
252 3v64_C Agrin; beta propeller, 97.6 0.025 8.6E-07 50.0 22.7 163 143-343 53-221 (349)
253 1kv9_A Type II quinohemoprotei 97.6 0.0026 9E-08 61.7 17.4 56 255-310 436-491 (668)
254 3nok_A Glutaminyl cyclase; bet 97.5 0.0032 1.1E-07 53.1 14.6 134 129-294 101-253 (268)
255 3pbp_A Nucleoporin NUP82; beta 97.5 0.018 6.1E-07 51.8 20.0 105 237-343 67-198 (452)
256 1mda_H Methylamine dehydrogena 97.5 0.00028 9.6E-09 63.2 8.4 130 144-307 47-194 (368)
257 3tc9_A Hypothetical hydrolase; 97.5 0.0099 3.4E-07 54.3 18.6 143 133-306 149-300 (430)
258 3v65_B Low-density lipoprotein 97.5 0.023 7.8E-07 51.1 20.6 170 135-343 89-264 (386)
259 2xbg_A YCF48-like protein; pho 97.4 0.04 1.4E-06 48.2 21.2 184 124-346 122-313 (327)
260 3mbr_X Glutamine cyclotransfer 97.4 0.011 3.8E-07 49.2 16.2 134 129-294 70-222 (243)
261 3v9f_A Two-component system se 97.4 0.019 6.5E-07 56.6 20.9 184 124-343 363-557 (781)
262 2ad6_A Methanol dehydrogenase 97.4 0.012 4E-07 56.0 18.5 54 256-310 443-497 (571)
263 2xe4_A Oligopeptidase B; hydro 97.4 0.0012 4E-08 65.1 11.9 111 163-307 175-304 (751)
264 3v9f_A Two-component system se 97.4 0.028 9.6E-07 55.4 21.8 189 124-346 313-516 (781)
265 2xbg_A YCF48-like protein; pho 97.3 0.051 1.7E-06 47.5 20.8 182 124-343 80-268 (327)
266 1flg_A Protein (quinoprotein e 97.3 0.0096 3.3E-07 56.7 17.0 55 256-310 465-519 (582)
267 3amr_A 3-phytase; beta-propell 97.3 0.077 2.6E-06 46.6 20.9 182 132-343 39-250 (355)
268 1k3i_A Galactose oxidase precu 97.3 0.014 4.7E-07 56.5 17.9 212 129-344 250-530 (656)
269 2fp8_A Strictosidine synthase; 97.3 0.014 4.9E-07 50.7 16.6 131 143-306 165-312 (322)
270 3tc9_A Hypothetical hydrolase; 97.2 0.005 1.7E-07 56.3 13.5 141 163-343 138-288 (430)
271 3p5b_L Low density lipoprotein 97.2 0.092 3.1E-06 47.3 21.8 165 143-343 92-264 (400)
272 2p9w_A MAL S 1 allergenic prot 97.2 0.015 5E-07 50.7 15.3 161 158-346 9-206 (334)
273 1ijq_A LDL receptor, low-densi 97.2 0.098 3.4E-06 45.4 23.6 165 143-343 10-182 (316)
274 3v65_B Low-density lipoprotein 97.2 0.12 4.1E-06 46.3 22.4 150 125-306 117-276 (386)
275 3qqz_A Putative uncharacterize 97.1 0.049 1.7E-06 45.8 17.7 157 157-345 22-193 (255)
276 4hw6_A Hypothetical protein, I 97.1 0.062 2.1E-06 49.0 19.5 140 134-306 153-303 (433)
277 2p9w_A MAL S 1 allergenic prot 97.1 0.033 1.1E-06 48.5 16.4 158 128-306 17-214 (334)
278 1w6s_A Methanol dehydrogenase 97.1 0.037 1.3E-06 52.8 18.2 56 255-310 451-506 (599)
279 3sov_A LRP-6, low-density lipo 97.0 0.078 2.7E-06 46.2 18.6 165 142-343 12-184 (318)
280 3pbp_A Nucleoporin NUP82; beta 97.0 0.067 2.3E-06 48.2 18.1 156 131-303 30-208 (452)
281 1k3i_A Galactose oxidase precu 97.0 0.04 1.4E-06 53.2 18.3 67 128-194 192-276 (656)
282 3p5b_L Low density lipoprotein 97.0 0.19 6.6E-06 45.2 25.0 153 123-307 111-277 (400)
283 2ad6_A Methanol dehydrogenase 97.0 0.0078 2.7E-07 57.2 12.6 31 246-276 474-504 (571)
284 3sre_A PON1, serum paraoxonase 96.9 0.18 6.1E-06 44.6 20.3 171 141-345 81-287 (355)
285 2p4o_A Hypothetical protein; p 96.8 0.16 5.6E-06 43.6 19.0 111 162-306 32-146 (306)
286 3v64_C Agrin; beta propeller, 96.8 0.24 8.1E-06 43.7 24.0 150 125-307 74-234 (349)
287 3m0c_C LDL receptor, low-densi 96.8 0.28 9.4E-06 48.4 22.2 168 142-343 403-576 (791)
288 1ijq_A LDL receptor, low-densi 96.6 0.3 1E-05 42.3 25.6 149 125-306 31-194 (316)
289 1flg_A Protein (quinoprotein e 96.6 0.011 3.7E-07 56.3 10.6 49 246-294 496-547 (582)
290 2ism_A Putative oxidoreductase 96.6 0.093 3.2E-06 46.4 16.0 103 162-294 31-151 (352)
291 3m0c_C LDL receptor, low-densi 96.6 0.64 2.2E-05 45.8 26.2 151 124-306 424-588 (791)
292 1tl2_A L10, protein (tachylect 96.6 0.11 3.9E-06 42.3 14.7 147 163-342 42-199 (236)
293 3sov_A LRP-6, low-density lipo 96.6 0.34 1.2E-05 42.1 22.4 149 125-306 36-196 (318)
294 1kv9_A Type II quinohemoprotei 96.4 0.046 1.6E-06 52.9 13.7 170 133-310 117-336 (668)
295 4hw6_A Hypothetical protein, I 96.0 0.1 3.6E-06 47.5 13.1 142 163-343 140-291 (433)
296 3a9g_A Putative uncharacterize 95.9 0.44 1.5E-05 42.1 16.3 103 162-294 29-151 (354)
297 2g8s_A Glucose/sorbosone dehyd 95.9 0.3 1E-05 43.1 15.2 29 163-191 19-47 (353)
298 1w6s_A Methanol dehydrogenase 95.8 1.3 4.5E-05 42.0 22.2 70 240-310 245-345 (599)
299 1tl2_A L10, protein (tachylect 95.8 0.063 2.1E-06 43.8 9.6 101 236-342 41-152 (236)
300 3kya_A Putative phosphatase; s 95.8 0.42 1.4E-05 44.2 16.1 141 135-306 154-340 (496)
301 1cru_A Protein (soluble quinop 95.7 0.91 3.1E-05 41.5 18.4 33 162-194 27-59 (454)
302 3kya_A Putative phosphatase; s 95.6 0.37 1.3E-05 44.6 15.1 150 163-343 140-328 (496)
303 3das_A Putative oxidoreductase 95.6 1.1 3.6E-05 39.5 17.4 105 162-292 32-154 (347)
304 3s94_A LRP-6, low-density lipo 95.5 1.2 4.2E-05 42.4 19.0 165 142-343 17-189 (619)
305 2ism_A Putative oxidoreductase 95.5 0.36 1.2E-05 42.6 14.2 106 235-343 30-153 (352)
306 1n7d_A LDL receptor, low-densi 95.4 0.054 1.9E-06 52.7 9.1 165 142-342 385-557 (699)
307 4a0p_A LRP6, LRP-6, low-densit 95.3 2.1 7.2E-05 40.9 21.6 164 141-343 13-184 (628)
308 1n7d_A LDL receptor, low-densi 95.3 0.094 3.2E-06 51.0 10.6 141 133-306 417-570 (699)
309 3sre_A PON1, serum paraoxonase 95.3 0.58 2E-05 41.3 14.7 147 163-344 51-240 (355)
310 3das_A Putative oxidoreductase 94.7 1.1 3.7E-05 39.4 14.8 111 234-344 30-159 (347)
311 3amr_A 3-phytase; beta-propell 94.6 2.2 7.4E-05 37.4 20.6 137 142-306 98-262 (355)
312 3ei3_A DNA damage-binding prot 94.5 4.3 0.00015 41.8 20.5 73 234-306 552-635 (1158)
313 1cru_A Protein (soluble quinop 94.4 1.5 5E-05 40.2 15.6 110 235-344 26-163 (454)
314 3s94_A LRP-6, low-density lipo 94.4 3.6 0.00012 39.2 21.2 149 126-306 42-201 (619)
315 3ii7_A Kelch-like protein 7; p 94.2 2.2 7.7E-05 36.1 16.3 83 257-346 169-258 (306)
316 2vpj_A Kelch-like protein 12; 93.9 2.6 8.9E-05 35.6 17.5 94 246-346 159-264 (301)
317 2xn4_A Kelch-like protein 2; s 93.3 3.3 0.00011 35.0 16.6 94 246-346 155-262 (302)
318 1zgk_A Kelch-like ECH-associat 93.0 3.8 0.00013 34.8 15.5 94 246-346 168-273 (308)
319 2vpj_A Kelch-like protein 12; 93.0 3.7 0.00013 34.6 17.4 94 246-346 112-217 (301)
320 2xzh_A Clathrin heavy chain 1; 92.6 4.8 0.00016 35.0 16.5 167 114-306 138-331 (365)
321 4a0p_A LRP6, LRP-6, low-densit 92.0 8.7 0.0003 36.6 23.9 183 125-309 38-239 (628)
322 3ott_A Two-component system se 91.9 9.9 0.00034 37.0 23.7 182 126-341 105-295 (758)
323 4gq2_M Nucleoporin NUP120; bet 90.2 7.6 0.00026 39.1 15.5 39 236-274 236-274 (950)
324 2xzh_A Clathrin heavy chain 1; 89.9 9.2 0.00031 33.3 16.7 95 241-343 72-170 (365)
325 1zgk_A Kelch-like ECH-associat 89.6 8.6 0.00029 32.5 14.3 94 246-346 121-226 (308)
326 2g8s_A Glucose/sorbosone dehyd 89.5 2.1 7.1E-05 37.6 9.7 107 236-343 18-148 (353)
327 2xn4_A Kelch-like protein 2; s 88.6 10 0.00034 31.9 13.8 61 246-307 204-276 (302)
328 1bpo_A Protein (clathrin); cla 88.6 14 0.00048 33.5 19.7 167 114-306 137-330 (494)
329 3a9g_A Putative uncharacterize 87.9 13 0.00045 32.4 24.8 64 278-343 259-330 (354)
330 2wg3_C Hedgehog-interacting pr 87.8 16 0.00053 33.4 14.6 29 163-191 15-44 (463)
331 1bpo_A Protein (clathrin); cla 87.3 17 0.00057 33.0 15.1 95 241-343 71-169 (494)
332 2uvk_A YJHT; unknown function, 86.1 7.5 0.00026 33.6 11.3 13 334-346 315-327 (357)
333 2be1_A Serine/threonine-protei 85.8 0.83 2.8E-05 40.0 4.7 30 246-275 110-139 (339)
334 3s25_A Hypothetical 7-bladed b 85.5 16 0.00055 31.1 15.6 61 242-306 151-215 (302)
335 4asc_A Kelch repeat and BTB do 84.7 17 0.00059 30.7 14.3 61 246-307 148-221 (315)
336 2wg3_C Hedgehog-interacting pr 84.6 21 0.0007 32.6 13.7 110 236-345 14-159 (463)
337 3ii7_A Kelch-like protein 7; p 83.2 19 0.00066 30.1 16.1 62 246-308 101-179 (306)
338 4gq2_M Nucleoporin NUP120; bet 82.3 20 0.00067 36.1 13.5 38 163-200 237-274 (950)
339 3ei3_A DNA damage-binding prot 81.9 50 0.0017 34.0 24.6 70 126-196 516-595 (1158)
340 2woz_A Kelch repeat and BTB do 81.2 24 0.00081 29.8 15.3 93 246-345 158-263 (318)
341 4asc_A Kelch repeat and BTB do 79.4 27 0.00093 29.4 15.9 61 246-307 98-174 (315)
342 2be1_A Serine/threonine-protei 78.7 2.3 7.9E-05 37.1 4.8 107 175-310 12-133 (339)
343 4fhn_B Nucleoporin NUP120; pro 78.1 7.5 0.00026 40.0 9.1 38 237-274 239-276 (1139)
344 3qhy_B Beta-lactamase inhibito 77.7 30 0.001 29.0 16.3 64 125-192 64-129 (282)
345 2zwa_A Leucine carboxyl methyl 74.2 64 0.0022 31.0 17.9 64 246-309 500-579 (695)
346 1xi4_A Clathrin heavy chain; a 72.8 43 0.0015 35.3 12.6 143 141-306 177-330 (1630)
347 2woz_A Kelch repeat and BTB do 71.9 44 0.0015 28.1 15.7 60 246-307 109-184 (318)
348 2uvk_A YJHT; unknown function, 71.7 47 0.0016 28.4 16.0 49 257-305 168-224 (357)
349 2zwa_A Leucine carboxyl methyl 70.1 79 0.0027 30.3 15.9 63 132-194 451-524 (695)
350 3f7f_A Nucleoporin NUP120; nuc 70.1 14 0.00048 35.6 8.1 37 163-201 223-259 (729)
351 3qhy_B Beta-lactamase inhibito 70.0 47 0.0016 27.7 16.0 165 125-340 103-269 (282)
352 3b7f_A Glycosyl hydrolase, BNR 69.1 58 0.002 28.4 18.9 62 236-298 177-254 (394)
353 3f7f_A Nucleoporin NUP120; nuc 68.9 9.3 0.00032 36.9 6.6 38 236-275 222-259 (729)
354 3sbq_A Nitrous-oxide reductase 66.8 5.9 0.0002 37.1 4.6 108 234-343 321-453 (638)
355 1xi4_A Clathrin heavy chain; a 65.0 48 0.0016 35.0 11.1 94 242-343 72-169 (1630)
356 3sbq_A Nitrous-oxide reductase 63.8 31 0.0011 32.3 8.7 84 163-266 324-408 (638)
357 4fhn_B Nucleoporin NUP120; pro 63.6 20 0.00069 36.8 8.4 37 163-199 239-275 (1139)
358 3ott_A Two-component system se 63.2 1.1E+02 0.0038 29.4 26.0 109 236-346 373-494 (758)
359 3s25_A Hypothetical 7-bladed b 60.5 76 0.0026 26.8 13.9 60 242-306 110-175 (302)
360 3b7f_A Glycosyl hydrolase, BNR 59.3 90 0.0031 27.2 19.3 104 237-345 116-253 (394)
361 3uc1_A DNA gyrase subunit A; D 50.6 1.2E+02 0.0041 26.0 19.6 188 133-346 109-321 (327)
362 1suu_A DNA gyrase subunit A; t 43.2 1.5E+02 0.0052 25.0 21.1 196 126-346 1-222 (312)
363 3no0_A DNA gyrase subunit A; D 38.6 1.7E+02 0.0058 24.3 22.2 167 111-306 8-195 (276)
364 3uc1_A DNA gyrase subunit A; D 32.6 2.3E+02 0.008 24.1 22.6 147 132-306 52-227 (327)
365 3no0_A DNA gyrase subunit A; D 32.6 2.1E+02 0.0072 23.6 17.8 149 132-306 79-245 (276)
366 4a9v_A PHOX; hydrolase, beta-p 32.0 1.3E+02 0.0045 28.2 7.5 58 279-342 477-548 (592)
367 3zwu_A Alkaline phosphatase PH 26.7 1.9E+02 0.0066 27.1 7.8 20 234-253 529-548 (592)
368 3zwu_A Alkaline phosphatase PH 22.9 3.7E+02 0.013 25.2 9.0 52 238-289 478-542 (592)
369 3al9_A Plexin-A2; beta-propell 22.1 1.4E+02 0.0047 27.8 5.8 66 279-346 401-472 (539)
370 1zvt_A Topoisomerase IV subuni 21.3 3.3E+02 0.011 22.1 10.1 59 247-306 44-113 (256)
371 1zvt_A Topoisomerase IV subuni 20.7 3.4E+02 0.012 22.0 17.3 71 235-306 83-162 (256)
372 1q47_A Semaphorin 3A; beta pro 20.4 2.8E+02 0.0097 25.3 7.5 53 135-187 423-487 (495)
373 1q47_A Semaphorin 3A; beta pro 20.1 3.7E+02 0.013 24.5 8.2 28 234-261 460-487 (495)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=246.27 Aligned_cols=192 Identities=14% Similarity=0.201 Sum_probs=161.8
Q ss_pred eeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCC-CEEEEEeCCCcEEEEecCCC
Q 043707 119 IVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDS-NKIFTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 119 l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~-~~l~s~~~Dg~I~vwd~~~~ 193 (347)
+.+|++.|+++++ ++++|++|+.||+|++||.. +.+..+.+|.+.|.+++|+|++ .+|++|+.||+|++||++++
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc
Confidence 4479999999987 57899999999999999965 4577889999999999999987 47899999999999999987
Q ss_pred CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCEEEEE
Q 043707 194 NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE-QGLLYSGSWDKTLKVWRISDCKCLES 272 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~l~s~s~dg~i~vwdl~~~~~~~~ 272 (347)
+........ .|...+.+++|+|+ +.+|++|+.||+|+|||+++++++..
T Consensus 203 ~~~~~~~~~------------------------------~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~ 252 (344)
T 4gqb_B 203 KPASQIGCS------------------------------APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS 252 (344)
T ss_dssp SCEEECC----------------------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE
T ss_pred ceeeeeecc------------------------------eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE
Confidence 643322211 26667999999995 67899999999999999999999999
Q ss_pred EecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCC-EEEEecCCCC
Q 043707 273 INAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESA-VVYCGSSDGL 347 (347)
Q Consensus 273 ~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~-~l~sgs~DG~ 347 (347)
+.+|...|++++|+|++ +|++|+.|++|+|||++... +..+.+|...|++|+|+|+++ +|++||.||+
T Consensus 253 ~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~-------~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~ 323 (344)
T 4gqb_B 253 SAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE-------LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQ 323 (344)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE-------EEEECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc-------EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCe
Confidence 99999999999999986 78999999999999997432 234678999999999999985 6779999985
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.7e-32 Score=241.94 Aligned_cols=227 Identities=20% Similarity=0.237 Sum_probs=180.5
Q ss_pred eeEeeeeccccEEEEeec------CCEEEEecCCCcEEEEeCCCc----ceeeecCCCCeeEEEEeCCCCEEEEEeCCCc
Q 043707 115 LIGSIVRKEGHIYSLAAS------GDLLYTGSDSKNIRVWKNLKE----FSGFKSNSGLVKAIIITGDSNKIFTGHQDGK 184 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~------~~~l~tg~~dg~I~vwd~~~~----~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~ 184 (347)
+++.+.+|++.|++++|+ +++|++|+.|++|+||+.... ...+.+|...|.+++|++++.++++++.|++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 456778999999999984 458999999999999995432 3457899999999999999999999999999
Q ss_pred EEEEecCCCCCceeeeec--------ccccccceEEeccCCCeE-EEEeecce-eeeeecCCCeeEEEEcCCCCEEEEEe
Q 043707 185 IRIWKVSRKNPSVHKRVG--------SLPTFKDYVKSSVNPKNY-VEVRRNRN-VLKIRHYDAVSCLSLNAEQGLLYSGS 254 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~s~s 254 (347)
|++||+.+++........ ..|....++....+.... +.+..... .....|...|.+++|+|++++|++|+
T Consensus 104 i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~ 183 (321)
T 3ow8_A 104 IRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA 183 (321)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc
Confidence 999999887643322211 112222222222222211 11112222 23345788899999999999999999
Q ss_pred CCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEc
Q 043707 255 WDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVN 333 (347)
Q Consensus 255 ~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~ 333 (347)
.||.|++||+++++++..+.+|...|.+++|+|++ +|++|+.|+.|++||++... +...+.+|...|++++|+
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~------~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN------LAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC------EEEEECCCSSCEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc------eeEEEcCCCCceEEEEEC
Confidence 99999999999999999999999999999999998 89999999999999997543 456778899999999999
Q ss_pred cCCCEEEEecCCCC
Q 043707 334 QESAVVYCGSSDGL 347 (347)
Q Consensus 334 p~~~~l~sgs~DG~ 347 (347)
|++++|++|+.||+
T Consensus 258 p~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 258 PDDTHFVSSSSDKS 271 (321)
T ss_dssp TTSSEEEEEETTSC
T ss_pred CCCCEEEEEeCCCc
Confidence 99999999999985
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.3e-32 Score=249.22 Aligned_cols=241 Identities=21% Similarity=0.321 Sum_probs=191.4
Q ss_pred CCCCCCcccccc-------------cceeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCC
Q 043707 101 PYSPNENLLSSC-------------NGLIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGL 163 (347)
Q Consensus 101 ~~~p~~~~~~~~-------------~~~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~ 163 (347)
.|+|++..+++. ..++.++.+|.+.|.+++++ +++|++|+.||+|+|||.. +.+..+.+|...
T Consensus 115 ~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~ 194 (410)
T 1vyh_C 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN 194 (410)
T ss_dssp EECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCC
Confidence 577777665442 23677889999999999874 7799999999999999965 456778899999
Q ss_pred eeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeee--------cccccccceEEeccCCCeEE-EEeecc-eeeeee
Q 043707 164 VKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRV--------GSLPTFKDYVKSSVNPKNYV-EVRRNR-NVLKIR 233 (347)
Q Consensus 164 V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~ 233 (347)
|.+++|+|++++|++|+.|++|++||++++........ ...+....++....+....+ ++.... .....+
T Consensus 195 V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~ 274 (410)
T 1vyh_C 195 VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274 (410)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC
Confidence 99999999999999999999999999998764332211 11122222333333332222 222222 223457
Q ss_pred cCCCeeEEEEcCC--------------------CCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEE
Q 043707 234 HYDAVSCLSLNAE--------------------QGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVF 292 (347)
Q Consensus 234 h~~~V~~l~~~~~--------------------~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~ 292 (347)
|...|.+++|+|+ +.+|++|+.|++|++||+++++++..+.+|...|.+++|+|++ +|+
T Consensus 275 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~ 354 (410)
T 1vyh_C 275 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354 (410)
T ss_dssp CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE
T ss_pred CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE
Confidence 9999999999996 6789999999999999999999999999999999999999997 899
Q ss_pred EEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 293 TGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 293 s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+|+.||.|++||+.... +...+.+|...|++++|+|++.+|++|+.||+
T Consensus 355 s~s~D~~i~vwd~~~~~------~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~ 403 (410)
T 1vyh_C 355 SCADDKTLRVWDYKNKR------CMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQT 403 (410)
T ss_dssp EEETTTEEEEECCTTSC------CCEEEECCSSCEEEEEECSSSSCEEEEETTSE
T ss_pred EEeCCCeEEEEECCCCc------eEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCc
Confidence 99999999999997443 46677889999999999999999999999984
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.4e-32 Score=246.18 Aligned_cols=190 Identities=17% Similarity=0.233 Sum_probs=158.4
Q ss_pred eeccccEEEEeecC-CEEEEecCCCcEEEEeCCC--cce----eeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCC
Q 043707 120 VRKEGHIYSLAASG-DLLYTGSDSKNIRVWKNLK--EFS----GFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 120 ~~h~~~V~~l~~~~-~~l~tg~~dg~I~vwd~~~--~~~----~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
..|+..|.+++|.+ +.|++|+.||+|+|||..+ ... ...+|.+.|.+++|+|++++|++|+.||+|++||+++
T Consensus 79 ~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~ 158 (344)
T 4gqb_B 79 VQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ 158 (344)
T ss_dssp EEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred eccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 34567799999864 5899999999999999543 222 3458999999999999999999999999999999988
Q ss_pred CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCEEEE
Q 043707 193 KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ-GLLYSGSWDKTLKVWRISDCKCLE 271 (347)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~s~s~dg~i~vwdl~~~~~~~ 271 (347)
++.... +.+|...|.+++|++++ .+|++++.|++|++||+++++++.
T Consensus 159 ~~~~~~--------------------------------~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~ 206 (344)
T 4gqb_B 159 QVVLSS--------------------------------YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPAS 206 (344)
T ss_dssp TEEEEE--------------------------------ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEE
T ss_pred CcEEEE--------------------------------EcCcCCceEEEEecCCCCCceeeeccccccccccccccceee
Confidence 753221 12599999999999987 588999999999999999999888
Q ss_pred EEe--cCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCC-CEEEEecCCC
Q 043707 272 SIN--AHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQES-AVVYCGSSDG 346 (347)
Q Consensus 272 ~~~--~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~-~~l~sgs~DG 346 (347)
.+. .|...+.+++|+|++ +|++|+.||.|++||++... ++..+.+|...|++|+|+|++ ++|++|+.||
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~------~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS------CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--------CCEEEECCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCc------EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC
Confidence 774 456679999999864 88999999999999998543 567788999999999999998 6899999998
Q ss_pred C
Q 043707 347 L 347 (347)
Q Consensus 347 ~ 347 (347)
+
T Consensus 281 ~ 281 (344)
T 4gqb_B 281 S 281 (344)
T ss_dssp C
T ss_pred e
Confidence 5
No 5
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.1e-31 Score=233.16 Aligned_cols=231 Identities=18% Similarity=0.159 Sum_probs=172.9
Q ss_pred eEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC----CcceeeecCCCCeeEEEEeC--CCCEEEEEeCCCcEEE
Q 043707 116 IGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL----KEFSGFKSNSGLVKAIIITG--DSNKIFTGHQDGKIRI 187 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~----~~~~~~~~h~~~V~~l~~sp--~~~~l~s~~~Dg~I~v 187 (347)
+..+.+|.+.|.++++ +|++|++|+.|++|+|||.. +.+..+.+|.+.|.+++|++ ++++|++|+.||+|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 4567789999999886 58899999999999999964 34678899999999999986 3889999999999999
Q ss_pred EecCCCCCceeee----------eccccc--ccceEEeccCCCe-EEEEeecc---eeeeeecCCCeeEEEEcCC-----
Q 043707 188 WKVSRKNPSVHKR----------VGSLPT--FKDYVKSSVNPKN-YVEVRRNR---NVLKIRHYDAVSCLSLNAE----- 246 (347)
Q Consensus 188 wd~~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~-~~~~~~~~---~~~~~~h~~~V~~l~~~~~----- 246 (347)
||+++++...... +...|. ...++....+... ++++.... .....+|...|.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~ 161 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC----
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccc
Confidence 9998764211111 111121 1122223333222 22222221 2345579999999999996
Q ss_pred --------CCEEEEEeCCCcEEEEeCCCCE----EEEEEecCCCcEEEEEeCCCC----EEEEEeCCCcEEEEEcccCCc
Q 043707 247 --------QGLLYSGSWDKTLKVWRISDCK----CLESINAHDDAINSVVAGFDS----LVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 247 --------~~~l~s~s~dg~i~vwdl~~~~----~~~~~~~h~~~v~~i~~~~~~----~l~s~~~dg~I~vwd~~~~~~ 310 (347)
+.+|++|+.|++|++||+++++ .+..+.+|...|.+++|+|++ +|++++.|++|+|||++....
T Consensus 162 ~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp --------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred ccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 4799999999999999998765 677889999999999999973 899999999999999975321
Q ss_pred cceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 311 GTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 311 ~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
...... .....|...|.+++|+|++++|++++.||+
T Consensus 242 ~~~~~~-~~~~~~~~~v~~~~~s~~g~~las~~~D~~ 277 (297)
T 2pm7_B 242 PWKKTL-LKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (297)
T ss_dssp CCEEEE-SSSSCCSSCEEEEEECSSSCCEEEEETTSC
T ss_pred ccceee-eecccCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 111111 112467889999999999999999999985
No 6
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.3e-32 Score=242.69 Aligned_cols=200 Identities=22% Similarity=0.315 Sum_probs=169.4
Q ss_pred ceeEeeeeccc-cEEEEee--cCCEEEEecCCCcEEEEeCCCc-----ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcE
Q 043707 114 GLIGSIVRKEG-HIYSLAA--SGDLLYTGSDSKNIRVWKNLKE-----FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKI 185 (347)
Q Consensus 114 ~~i~~l~~h~~-~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~-----~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I 185 (347)
.++.++.+|.+ .|+++++ +|++|++|+.|++|+|||.... .....+|...|.+++|+|++++|++|+.|++|
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 46788999988 8888876 5789999999999999996532 12236899999999999999999999999999
Q ss_pred EEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 043707 186 RIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRIS 265 (347)
Q Consensus 186 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~ 265 (347)
++||+..+...... .+.+|...|.+++|+|++++|++|+.|++|++||++
T Consensus 86 ~iw~~~~~~~~~~~------------------------------~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~ 135 (345)
T 3fm0_A 86 CIWKKNQDDFECVT------------------------------TLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVD 135 (345)
T ss_dssp EEEEECCC-EEEEE------------------------------EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEC
T ss_pred EEEEccCCCeEEEE------------------------------EccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECC
Confidence 99998765421111 122599999999999999999999999999999998
Q ss_pred CC---EEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEE
Q 043707 266 DC---KCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYC 341 (347)
Q Consensus 266 ~~---~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~s 341 (347)
++ +++..+..|...|.+++|+|++ +|++++.|+.|++||.+... ......+.+|...|++|+|+|++++|++
T Consensus 136 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~----~~~~~~~~~h~~~v~~l~~sp~g~~l~s 211 (345)
T 3fm0_A 136 EEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD----WVCCATLEGHESTVWSLAFDPSGQRLAS 211 (345)
T ss_dssp TTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCC----EEEEEEecCCCCceEEEEECCCCCEEEE
Confidence 65 4677888999999999999997 99999999999999987432 2345677889999999999999999999
Q ss_pred ecCCCC
Q 043707 342 GSSDGL 347 (347)
Q Consensus 342 gs~DG~ 347 (347)
|+.||+
T Consensus 212 ~s~D~~ 217 (345)
T 3fm0_A 212 CSDDRT 217 (345)
T ss_dssp EETTSC
T ss_pred EeCCCe
Confidence 999985
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=6.4e-31 Score=232.70 Aligned_cols=227 Identities=17% Similarity=0.293 Sum_probs=177.8
Q ss_pred eeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec
Q 043707 115 LIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV 190 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~ 190 (347)
.+..+..|...|.++.+ ++++|++|+.|++|++||.. +.+..+.+|.+.|.+++|+|++++|++|+.||+|++||+
T Consensus 47 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEG
T ss_pred eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEEC
Confidence 57788889999988875 68899999999999999965 557788999999999999999999999999999999999
Q ss_pred CCCCCceeee---------ecccccccc-eEEeccCCCeEE-EEeecc--eeeeeecCCCeeEEEEcC--CCCEEEEEeC
Q 043707 191 SRKNPSVHKR---------VGSLPTFKD-YVKSSVNPKNYV-EVRRNR--NVLKIRHYDAVSCLSLNA--EQGLLYSGSW 255 (347)
Q Consensus 191 ~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~-~~~~~~--~~~~~~h~~~V~~l~~~~--~~~~l~s~s~ 255 (347)
+++....... +...|.... ++..+.+....+ ++.... .....+|...|.++.|+| ++.+|++|+.
T Consensus 127 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~ 206 (304)
T 2ynn_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (304)
T ss_dssp GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEET
T ss_pred CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcC
Confidence 8764322111 111221122 222222222111 111111 122335678899999987 6789999999
Q ss_pred CCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEcc
Q 043707 256 DKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQ 334 (347)
Q Consensus 256 dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p 334 (347)
|++|++||+++++++..+.+|...|.+++|+|++ +|++|+.||+|++||+++.. +.+.+..|...+.+++|+|
T Consensus 207 D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~------~~~~~~~~~~~~~~~~~~~ 280 (304)
T 2ynn_A 207 DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK------VEKTLNVGLERSWCIATHP 280 (304)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC------EEEEECCSSSSEEEEEECT
T ss_pred CCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc------eeeeccCCCccEEEEEECC
Confidence 9999999999999999999999999999999997 99999999999999997543 5667778889999999999
Q ss_pred CCC--EEEEecCCCC
Q 043707 335 ESA--VVYCGSSDGL 347 (347)
Q Consensus 335 ~~~--~l~sgs~DG~ 347 (347)
++. +|++|+.||+
T Consensus 281 ~~~~~~~asg~~~g~ 295 (304)
T 2ynn_A 281 TGRKNYIASGFDNGF 295 (304)
T ss_dssp TCGGGCEEEEETTEE
T ss_pred CCCceEEEEecCCce
Confidence 874 6899988873
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-31 Score=235.64 Aligned_cols=226 Identities=16% Similarity=0.212 Sum_probs=183.5
Q ss_pred eEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecC
Q 043707 116 IGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~ 191 (347)
...+.+|...|.+++++ +.++++|+.|++|++||.. +.+..+..|...+.+++|+|++++|++|+.||.|++||++
T Consensus 73 ~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~ 152 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE 152 (321)
T ss_dssp EEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT
T ss_pred eeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC
Confidence 45688999999999875 6799999999999999965 4466778888999999999999999999999999999998
Q ss_pred CCCCceeee--------ecccccccceEEeccCCCeEE-EEeeccee-eeeecCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 043707 192 RKNPSVHKR--------VGSLPTFKDYVKSSVNPKNYV-EVRRNRNV-LKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKV 261 (347)
Q Consensus 192 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~v 261 (347)
+++...... +...|....++....+....+ ++...... .+.+|...|.+++|+|++.+|++|+.|++|++
T Consensus 153 ~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 153 SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKI 232 (321)
T ss_dssp TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEE
Confidence 876433221 112233333333333333222 22222222 23468999999999999999999999999999
Q ss_pred EeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEE
Q 043707 262 WRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVY 340 (347)
Q Consensus 262 wdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~ 340 (347)
||+++++++..+.+|...|.+++|+|++ +|++++.|++|++||++... ++..+.+|...|++++|+|++++|+
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~------~~~~~~~h~~~v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT------CVHTFFDHQDQVWGVKYNGNGSKIV 306 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE------EEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE------EEEEEcCCCCcEEEEEECCCCCEEE
Confidence 9999999999999999999999999997 99999999999999997443 5667788999999999999999999
Q ss_pred EecCCCC
Q 043707 341 CGSSDGL 347 (347)
Q Consensus 341 sgs~DG~ 347 (347)
+++.||+
T Consensus 307 s~~~d~~ 313 (321)
T 3ow8_A 307 SVGDDQE 313 (321)
T ss_dssp EEETTCC
T ss_pred EEeCCCe
Confidence 9999985
No 9
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-31 Score=237.37 Aligned_cols=205 Identities=18% Similarity=0.288 Sum_probs=165.0
Q ss_pred ceeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCCC----cceee-ec-CCCCeeEEEEeCCCCEEEEEeCCCcEEE
Q 043707 114 GLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLK----EFSGF-KS-NSGLVKAIIITGDSNKIFTGHQDGKIRI 187 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~~----~~~~~-~~-h~~~V~~l~~sp~~~~l~s~~~Dg~I~v 187 (347)
.++.++.+|++.|+++++++++|++|+.|++|++||... ....+ .. |...|.+++|+|++++|++|+.|++|+|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~i 84 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSI 84 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 457889999999999999999999999999999999753 23334 34 9999999999999999999999999999
Q ss_pred EecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC-
Q 043707 188 WKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISD- 266 (347)
Q Consensus 188 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~- 266 (347)
||++........ ......+.+|...|.+++|+|++++|++|+.|++|++||++.
T Consensus 85 w~~~~~~~~~~~-------------------------~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~ 139 (330)
T 2hes_X 85 WAKEESADRTFE-------------------------MDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDES 139 (330)
T ss_dssp EEC-------CC-------------------------CEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTT
T ss_pred EEcccCcCcccc-------------------------ceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCC
Confidence 998643210000 000112236999999999999999999999999999999943
Q ss_pred ---CEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccC--CCEEE
Q 043707 267 ---CKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQE--SAVVY 340 (347)
Q Consensus 267 ---~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~--~~~l~ 340 (347)
.+++..+.+|...|.+++|+|++ +|++|+.|++|++||..... ..+...+.+|...|.+++|+|+ +.+|+
T Consensus 140 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 140 GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD----WECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE----EEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred CCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC----eeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 36788899999999999999987 99999999999999986432 2356678899999999999998 67999
Q ss_pred EecCCCC
Q 043707 341 CGSSDGL 347 (347)
Q Consensus 341 sgs~DG~ 347 (347)
+|+.||+
T Consensus 216 s~s~D~~ 222 (330)
T 2hes_X 216 SGSDDST 222 (330)
T ss_dssp EEETTSC
T ss_pred EEeCCCe
Confidence 9999985
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.9e-31 Score=231.46 Aligned_cols=228 Identities=18% Similarity=0.251 Sum_probs=181.3
Q ss_pred ceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
.+.+++.+|.+.|.++++ ++++|++|+.||+|++||.. +....+..|...|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 356789999999999986 57799999999999999965 44677889999999999999999999999999999999
Q ss_pred cCCCCCceeee--------ecccccccceEEeccCCCeEEE-Eeecce--eeeeecCCCeeEEEEcC-CCCEEEEEeCCC
Q 043707 190 VSRKNPSVHKR--------VGSLPTFKDYVKSSVNPKNYVE-VRRNRN--VLKIRHYDAVSCLSLNA-EQGLLYSGSWDK 257 (347)
Q Consensus 190 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~h~~~V~~l~~~~-~~~~l~s~s~dg 257 (347)
+.+++...... +...|....++..+.+....+. +..... ....+|...|.+++|+| ++.+|++|+.|+
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 99886533221 1222333333444444333222 222212 33457999999999999 678999999999
Q ss_pred cEEEEeCCCCEEEEEEe-cCCCcEEEEEeCC--CC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEc
Q 043707 258 TLKVWRISDCKCLESIN-AHDDAINSVVAGF--DS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVN 333 (347)
Q Consensus 258 ~i~vwdl~~~~~~~~~~-~h~~~v~~i~~~~--~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~ 333 (347)
+|++||+++.++...+. .|...+..+.|.| ++ +|++|+.|++|++||++... +...+.+|...|++++|+
T Consensus 164 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~------~~~~~~~h~~~v~~~~~~ 237 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS------CVATLEGHMSNVSFAVFH 237 (304)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE------EEEEEECCSSCEEEEEEC
T ss_pred eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc------cceeeCCCCCCEEEEEEC
Confidence 99999999887766664 5567899999987 44 89999999999999998543 567788999999999999
Q ss_pred cCCCEEEEecCCCC
Q 043707 334 QESAVVYCGSSDGL 347 (347)
Q Consensus 334 p~~~~l~sgs~DG~ 347 (347)
|++.+|++|+.||+
T Consensus 238 p~~~~l~s~s~Dg~ 251 (304)
T 2ynn_A 238 PTLPIIISGSEDGT 251 (304)
T ss_dssp SSSSEEEEEETTSC
T ss_pred CCCCEEEEEcCCCe
Confidence 99999999999985
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-31 Score=236.68 Aligned_cols=194 Identities=25% Similarity=0.451 Sum_probs=169.5
Q ss_pred eeEeeeeccccEEEEeec---CCEEEEecCCCcEEEEeCC-------CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCc
Q 043707 115 LIGSIVRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNL-------KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGK 184 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~-------~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~ 184 (347)
+..++.+|++.|.+++++ +++|++|+.|++|++|+.. ..+..+.+|...|.+++|+|++++|++|+.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 577899999999999975 3699999999999999853 235678899999999999999999999999999
Q ss_pred EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 043707 185 IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRI 264 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl 264 (347)
|++||+.+++.... +.+|...|.+++|+|++.+|++|+.|++|++||+
T Consensus 89 v~~wd~~~~~~~~~--------------------------------~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 89 LRLWDVATGETYQR--------------------------------FVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEEETTTTEEEEE--------------------------------EECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred EEEEECCCCCeeEE--------------------------------EccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 99999988753211 2259999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCcEEEEEeCCCC-------EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCC
Q 043707 265 SDCKCLESINAHDDAINSVVAGFDS-------LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESA 337 (347)
Q Consensus 265 ~~~~~~~~~~~h~~~v~~i~~~~~~-------~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~ 337 (347)
+ ++++..+.+|...|.++.+.|.. .|++++.|+.|++||++... ....+.+|...|++++|+|+++
T Consensus 137 ~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~------~~~~~~~h~~~v~~~~~sp~g~ 209 (319)
T 3frx_A 137 K-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ------IEADFIGHNSNINTLTASPDGT 209 (319)
T ss_dssp T-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE------EEEEECCCCSCEEEEEECTTSS
T ss_pred C-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch------hheeecCCCCcEEEEEEcCCCC
Confidence 6 56788899999999999998842 79999999999999997432 4556778999999999999999
Q ss_pred EEEEecCCCC
Q 043707 338 VVYCGSSDGL 347 (347)
Q Consensus 338 ~l~sgs~DG~ 347 (347)
+|++|+.||+
T Consensus 210 ~l~s~~~dg~ 219 (319)
T 3frx_A 210 LIASAGKDGE 219 (319)
T ss_dssp EEEEEETTCE
T ss_pred EEEEEeCCCe
Confidence 9999999984
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.7e-31 Score=237.23 Aligned_cols=209 Identities=19% Similarity=0.282 Sum_probs=177.1
Q ss_pred CCCCCCccccccc-----------------ceeEeeeeccccEEEEeec-CCEEEEecCCCcEEEEeCC--CcceeeecC
Q 043707 101 PYSPNENLLSSCN-----------------GLIGSIVRKEGHIYSLAAS-GDLLYTGSDSKNIRVWKNL--KEFSGFKSN 160 (347)
Q Consensus 101 ~~~p~~~~~~~~~-----------------~~i~~l~~h~~~V~~l~~~-~~~l~tg~~dg~I~vwd~~--~~~~~~~~h 160 (347)
.|+|++..++... .....+.+|.+.|.++.+. +..+++|+.|++|++||.. +....+.+|
T Consensus 104 ~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h 183 (340)
T 1got_B 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGH 183 (340)
T ss_dssp EECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCC
Confidence 5778877654321 2456678899999999874 5579999999999999965 446778899
Q ss_pred CCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeE
Q 043707 161 SGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSC 240 (347)
Q Consensus 161 ~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 240 (347)
.+.|.+++|+|++++|++|+.||+|++||++++..... +.+|...|.+
T Consensus 184 ~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~--------------------------------~~~h~~~v~~ 231 (340)
T 1got_B 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT--------------------------------FTGHESDINA 231 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE--------------------------------ECCCSSCEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE--------------------------------EcCCcCCEEE
Confidence 99999999999999999999999999999987653211 1248899999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEec--CCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeeh
Q 043707 241 LSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINA--HDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLA 317 (347)
Q Consensus 241 l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~--h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~ 317 (347)
++|+|++.+|++|+.||+|++||+++++.+..+.. +...|.+++|+|++ +|++|+.|+.|++||+.... ..
T Consensus 232 v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~------~~ 305 (340)
T 1got_B 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD------RA 305 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC------EE
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc------Ee
Confidence 99999999999999999999999999998887753 23479999999998 99999999999999997543 45
Q ss_pred hhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 318 QVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 318 ~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
..+.+|...|++++|+|++.+|++|+.||+
T Consensus 306 ~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 306 GVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred eEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 667899999999999999999999999985
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8e-31 Score=237.44 Aligned_cols=241 Identities=15% Similarity=0.216 Sum_probs=176.3
Q ss_pred CCCCCCCcccccccc-----------------------eeEeeeeccccEEEEeecC-CEEEEecCCCcEEEEeCCCc--
Q 043707 100 PPYSPNENLLSSCNG-----------------------LIGSIVRKEGHIYSLAASG-DLLYTGSDSKNIRVWKNLKE-- 153 (347)
Q Consensus 100 ~~~~p~~~~~~~~~~-----------------------~i~~l~~h~~~V~~l~~~~-~~l~tg~~dg~I~vwd~~~~-- 153 (347)
..|+|+|.++++... +.....+|++.|++++|.+ ..+++++.||+|+|||....
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~ 127 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKES 127 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-------
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccce
Confidence 368899988765421 2234456888899999863 46778889999999995432
Q ss_pred ----ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeee--------cccccccceE-EeccCCCeE
Q 043707 154 ----FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRV--------GSLPTFKDYV-KSSVNPKNY 220 (347)
Q Consensus 154 ----~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~ 220 (347)
.....+|.+.|.+++|+|++++|++|+.||+|++||+++++....... ...+....++ ....+....
T Consensus 128 ~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~ 207 (357)
T 4g56_B 128 LLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL 207 (357)
T ss_dssp -CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEE
T ss_pred eEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceE
Confidence 123447999999999999999999999999999999998764332211 1112222222 222222211
Q ss_pred E-EEeecceee---eeecCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC--EEEE
Q 043707 221 V-EVRRNRNVL---KIRHYDAVSCLSLNAE-QGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS--LVFT 293 (347)
Q Consensus 221 ~-~~~~~~~~~---~~~h~~~V~~l~~~~~-~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~--~l~s 293 (347)
+ ++....... ...|...+.+++|+|+ +.+|++|+.|+.|++||+++++++..+.+|...|++++|+|++ +|++
T Consensus 208 ~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~las 287 (357)
T 4g56_B 208 LWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLAS 287 (357)
T ss_dssp ECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEE
T ss_pred EEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEE
Confidence 1 111222111 2246678999999997 5789999999999999999999999999999999999999986 7899
Q ss_pred EeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEcc-CCCEEEEecCCCC
Q 043707 294 GSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQ-ESAVVYCGSSDGL 347 (347)
Q Consensus 294 ~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p-~~~~l~sgs~DG~ 347 (347)
|+.|++|+|||++... +.. ..+|...|++|+|+| ++.+|++||.||+
T Consensus 288 gs~D~~i~iwd~~~~~------~~~-~~~H~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 288 ISEDCTVAVLDADFSE------VFR-DLSHRDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp EETTSCEEEECTTSCE------EEE-ECCCSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EeCCCEEEEEECCCCc------EeE-ECCCCCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 9999999999997542 222 347999999999998 7899999999985
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.9e-30 Score=232.12 Aligned_cols=230 Identities=17% Similarity=0.276 Sum_probs=177.7
Q ss_pred ceeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
....++.+|.+.|+++.++ +++|++|+.||+|+|||.. +....+..|...|.+++|+|++++|++|+.|+.|++||
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~ 125 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEE
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3467899999999999974 7799999999999999954 45677888999999999999999999999999999999
Q ss_pred cCCCCCce--eeeecccc---------cccceEEeccCCCeEE-EEeecce-eeeeecCCCeeEEEEcCCCCEEEEEeCC
Q 043707 190 VSRKNPSV--HKRVGSLP---------TFKDYVKSSVNPKNYV-EVRRNRN-VLKIRHYDAVSCLSLNAEQGLLYSGSWD 256 (347)
Q Consensus 190 ~~~~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~s~s~d 256 (347)
+.+..... ........ ....++....+....+ ++..... ..+.+|...|.+++|+|++.+|++|+.|
T Consensus 126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp TTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 98764211 11111110 0111233333332222 2222222 2344699999999999999999999999
Q ss_pred CcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccC
Q 043707 257 KTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQE 335 (347)
Q Consensus 257 g~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~ 335 (347)
++|++||+++++++..+.+|...|.+++|+|++ +|++|+.||+|++||++.... ........+...|++++|+|+
T Consensus 206 ~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~----~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE----LMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE----EEEECCTTCCSCEEEEEECTT
T ss_pred CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE----EEEEccCCcccceEEEEECCC
Confidence 999999999999999999999999999999997 999999999999999985432 111112234457999999999
Q ss_pred CCEEEEecCCCC
Q 043707 336 SAVVYCGSSDGL 347 (347)
Q Consensus 336 ~~~l~sgs~DG~ 347 (347)
+++|++|+.||.
T Consensus 282 g~~l~~g~~d~~ 293 (340)
T 1got_B 282 GRLLLAGYDDFN 293 (340)
T ss_dssp SSEEEEEETTSE
T ss_pred CCEEEEECCCCe
Confidence 999999999973
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.98 E-value=1.2e-30 Score=234.83 Aligned_cols=195 Identities=17% Similarity=0.315 Sum_probs=166.0
Q ss_pred cceeEeeeeccccEEEEee--------cCCEEEEecCCCcEEEEeCCC---------cceeeecCCCCeeEEEEeCCCCE
Q 043707 113 NGLIGSIVRKEGHIYSLAA--------SGDLLYTGSDSKNIRVWKNLK---------EFSGFKSNSGLVKAIIITGDSNK 175 (347)
Q Consensus 113 ~~~i~~l~~h~~~V~~l~~--------~~~~l~tg~~dg~I~vwd~~~---------~~~~~~~h~~~V~~l~~sp~~~~ 175 (347)
..+...+.+|.+.|+++.+ ++++|++|+.|++|++||... ....+.+|...|.+++|+|++.+
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 3457789999999999987 577999999999999999542 24567899999999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC
Q 043707 176 IFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW 255 (347)
Q Consensus 176 l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~ 255 (347)
+++|+.|++|++||+++++.... +.+|...|.+++|+|++.+|++++.
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~--------------------------------~~~h~~~v~~v~~sp~~~~l~s~~~ 138 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKR--------------------------------FVGHQSEVYSVAFSPDNRQILSAGA 138 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEE--------------------------------EECCCSCEEEEEECSSTTEEEEEET
T ss_pred EEEEcCCCcEEEEECCCCcEEEE--------------------------------EcCCCCcEEEEEECCCCCEEEEEcC
Confidence 99999999999999988753211 1259999999999999999999999
Q ss_pred CCcEEEEeCCCCEEEEEEe---cCCCcEEEEEeCCCC-----------EEEEEeCCCcEEEEEcccCCccceeeehhhhh
Q 043707 256 DKTLKVWRISDCKCLESIN---AHDDAINSVVAGFDS-----------LVFTGSADGTVKVWRRELQGKGTKHFLAQVLL 321 (347)
Q Consensus 256 dg~i~vwdl~~~~~~~~~~---~h~~~v~~i~~~~~~-----------~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~ 321 (347)
|++|++||+.. +....+. .|...|.++.|+|++ +|++++.|+.|++||.. .. ....+.
T Consensus 139 d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~-----~~~~~~ 210 (343)
T 2xzm_R 139 EREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQ-----IRYTFK 210 (343)
T ss_dssp TSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TE-----EEEEEE
T ss_pred CCEEEEEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--Cc-----eeEEEc
Confidence 99999999984 3443433 788999999999874 79999999999999953 21 445677
Q ss_pred ccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 322 KQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 322 ~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+|...|++++|+|++++|++|+.||+
T Consensus 211 ~h~~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 211 AHESNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred CccccceEEEECCCCCEEEEEcCCCe
Confidence 89999999999999999999999984
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.98 E-value=8e-31 Score=241.81 Aligned_cols=194 Identities=19% Similarity=0.293 Sum_probs=172.0
Q ss_pred eEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecC
Q 043707 116 IGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~ 191 (347)
...+.+|.+.|+++.++ +.+|++|+.||+|+|||.. +....+.+|.+.|.+++|+|++++|++|+.||+|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 45678999999999875 6799999999999999954 4577889999999999999999999999999999999998
Q ss_pred CCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEE
Q 043707 192 RKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLE 271 (347)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~ 271 (347)
+.+.... ..+|...|.+++|+|++.+|++|+.|++|++||+++++++.
T Consensus 181 ~~~~~~~--------------------------------~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 181 GFECIRT--------------------------------MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228 (410)
T ss_dssp SSCEEEC--------------------------------CCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCceeEE--------------------------------EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 7642211 11489999999999999999999999999999999999999
Q ss_pred EEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccC---------------
Q 043707 272 SINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQE--------------- 335 (347)
Q Consensus 272 ~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~--------------- 335 (347)
.+.+|...|.++.+++++ +|++|+.|+.|++||++... ....+..|...|.+++|+|+
T Consensus 229 ~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
T 1vyh_C 229 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE------CKAELREHRHVVECISWAPESSYSSISEATGSETK 302 (410)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC--
T ss_pred EEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc------eeeEecCCCceEEEEEEcCcccccchhhhcccccc
Confidence 999999999999999998 89999999999999997543 45567789999999999996
Q ss_pred -----CCEEEEecCCCC
Q 043707 336 -----SAVVYCGSSDGL 347 (347)
Q Consensus 336 -----~~~l~sgs~DG~ 347 (347)
+.+|++|+.||+
T Consensus 303 ~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 303 KSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp -----CCEEEEEETTSE
T ss_pred ccCCCCCEEEEEeCCCe
Confidence 678999999974
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.98 E-value=2e-30 Score=234.56 Aligned_cols=195 Identities=18% Similarity=0.231 Sum_probs=168.3
Q ss_pred eeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeC--CCCEEEEEeCCCcEEEE
Q 043707 115 LIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITG--DSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp--~~~~l~s~~~Dg~I~vw 188 (347)
....+.+|.+.|.++.+. +..|++|+.|++|++||.. +.+..+.+|...|.+++|+| ++++|++|+.||+|++|
T Consensus 146 ~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~w 225 (354)
T 2pbi_B 146 KKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 225 (354)
T ss_dssp GCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEE
T ss_pred cceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEE
Confidence 356677899999998874 6699999999999999965 45678899999999999988 56899999999999999
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK 268 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~ 268 (347)
|+++++..... ..|...|.+++|+|++.+|++++.|++|++||++..+
T Consensus 226 d~~~~~~~~~~--------------------------------~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 226 DMRSGQCVQAF--------------------------------ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp ETTTCCEEEEE--------------------------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ECCCCcEEEEe--------------------------------cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99887532211 2489999999999999999999999999999999998
Q ss_pred EEEEEecC--CCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 269 CLESINAH--DDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 269 ~~~~~~~h--~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
.+..+..+ ...+.+++|+|++ +|++|+.|+.|++||+..+. ....+.+|...|++++|+|++++|++|+.|
T Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~------~~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 274 EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS------RVSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS------EEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc------eEEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 88777644 3478999999998 89999999999999997543 456678899999999999999999999999
Q ss_pred CC
Q 043707 346 GL 347 (347)
Q Consensus 346 G~ 347 (347)
|+
T Consensus 348 ~~ 349 (354)
T 2pbi_B 348 HT 349 (354)
T ss_dssp SE
T ss_pred CC
Confidence 84
No 18
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=9.9e-30 Score=229.11 Aligned_cols=228 Identities=17% Similarity=0.238 Sum_probs=172.7
Q ss_pred eeccccEEEEee--cCCEEEEecCCCcEEEEeCCC----cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCC
Q 043707 120 VRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK----EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 120 ~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~ 193 (347)
.+|.+.|.++++ ++++|++|+.|++|+||+... ....+.+|...|.+++|+|++++|++|+.|++|++||++..
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 579999999987 477999999999999998543 35678899999999999999999999999999999999876
Q ss_pred CCceee-----------eecccccccceEEeccCCCeEE-EEeecc---eeeeeecCCCeeEEEEcCCCCEEEEEeCCCc
Q 043707 194 NPSVHK-----------RVGSLPTFKDYVKSSVNPKNYV-EVRRNR---NVLKIRHYDAVSCLSLNAEQGLLYSGSWDKT 258 (347)
Q Consensus 194 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~ 258 (347)
...... .+...|....++....+....+ +..... .....+|...|.+++|+|++.+|++++.|++
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 138 DEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp SCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe
Confidence 432111 1112233333444444443332 222222 1234579999999999999999999999999
Q ss_pred EEEEeCCC---------------CEEEEEEec-CCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccc---eeeehh
Q 043707 259 LKVWRISD---------------CKCLESINA-HDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGT---KHFLAQ 318 (347)
Q Consensus 259 i~vwdl~~---------------~~~~~~~~~-h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~---~~~~~~ 318 (347)
|+|||+.. .+++..+.+ |...|.+++|++++ .|++++.|+.|++|+........ ......
T Consensus 218 v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~ 297 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAH 297 (345)
T ss_dssp EEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEE
T ss_pred EEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEee
Confidence 99999632 245556655 88899999999987 99999999999999987543211 111223
Q ss_pred hhhccCCcEEEEEEccCC-CEEEEecCCCC
Q 043707 319 VLLKQENAITALAVNQES-AVVYCGSSDGL 347 (347)
Q Consensus 319 ~~~~h~~~V~~l~~~p~~-~~l~sgs~DG~ 347 (347)
...+|...|++|+|+|++ .+|++|+.||+
T Consensus 298 ~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 298 LHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp ETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred ecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 456899999999999998 59999999985
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.98 E-value=4.7e-30 Score=227.53 Aligned_cols=197 Identities=22% Similarity=0.403 Sum_probs=171.2
Q ss_pred ceeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
.+..++.+|.+.|.+++++ +++|++|+.||.|++|+.. +....+.+|...|.+++|+|++++|++|+.||.|++||
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 4467888999999999874 7799999999999999964 44667889999999999999999999999999999999
Q ss_pred cCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEE
Q 043707 190 VSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKC 269 (347)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~ 269 (347)
+++++.... ..+|...|.+++|+|++.+|++|+.|++|++||++++++
T Consensus 94 ~~~~~~~~~--------------------------------~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 94 VSSGKCLKT--------------------------------LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp TTTCCEEEE--------------------------------EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCcEEEE--------------------------------EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE
Confidence 987753221 124889999999999999999999999999999999999
Q ss_pred EEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 270 LESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 270 ~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+..+..|...|.++.|+|++ +|++++.||.|++||++.... .......+...+..++|+|++++|++++.||.
T Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 215 (312)
T 4ery_A 142 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-----LKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 215 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-----EEEECCSSCCCEEEEEECTTSSEEEEEETTTE
T ss_pred EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce-----eeEEeccCCCceEEEEECCCCCEEEEEcCCCe
Confidence 99999999999999999987 899999999999999985432 22223456678999999999999999999873
No 20
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=1.2e-30 Score=232.13 Aligned_cols=228 Identities=15% Similarity=0.177 Sum_probs=166.6
Q ss_pred eeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCC----cceeeecCCCCeeEEEEeC--CCCEEEEEeCCCcEEEEe
Q 043707 118 SIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK----EFSGFKSNSGLVKAIIITG--DSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 118 ~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp--~~~~l~s~~~Dg~I~vwd 189 (347)
.+.+|++.|+++++ +|++|++|+.|++|+|||... .+..+.+|.+.|.+++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 45689999999886 588999999999999999643 3567889999999999986 488999999999999999
Q ss_pred cCCCCCceeeeec----------cccc--ccceEEeccCCCeEE-EEeecc----eeeeeecCCCeeEEEEcCC------
Q 043707 190 VSRKNPSVHKRVG----------SLPT--FKDYVKSSVNPKNYV-EVRRNR----NVLKIRHYDAVSCLSLNAE------ 246 (347)
Q Consensus 190 ~~~~~~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~-~~~~~~----~~~~~~h~~~V~~l~~~~~------ 246 (347)
+++++........ ..|. ...++....+....+ +..... .....+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 9876432211111 1122 112223333333222 222211 1223468889999999997
Q ss_pred -----------CCEEEEEeCCCcEEEEeCCCC---EEEEEEecCCCcEEEEEeCCCC-----EEEEEeCCCcEEEEEccc
Q 043707 247 -----------QGLLYSGSWDKTLKVWRISDC---KCLESINAHDDAINSVVAGFDS-----LVFTGSADGTVKVWRREL 307 (347)
Q Consensus 247 -----------~~~l~s~s~dg~i~vwdl~~~---~~~~~~~~h~~~v~~i~~~~~~-----~l~s~~~dg~I~vwd~~~ 307 (347)
+.+|++|+.|++|++||++.. +++..+.+|...|.+++|+|++ +|++++.|++|++|+++.
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 468999999999999999765 5778889999999999999973 899999999999999975
Q ss_pred CCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 308 QGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 308 ~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
... .......+..|...|.+++|+|++++|++|+.||+
T Consensus 248 ~~~--~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~ 285 (316)
T 3bg1_A 248 ASS--NTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNK 285 (316)
T ss_dssp TTC--CCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSC
T ss_pred ccc--cchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCe
Confidence 211 00122344678899999999999999999999985
No 21
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=2.3e-29 Score=224.92 Aligned_cols=234 Identities=21% Similarity=0.384 Sum_probs=175.2
Q ss_pred ceeEeeeeccccEEEEeec---CCEEEEecCCCcEEEEeCCC-------cceeeecCCCCeeEEEEeCCCCEEEEEeCCC
Q 043707 114 GLIGSIVRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNLK-------EFSGFKSNSGLVKAIIITGDSNKIFTGHQDG 183 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~~-------~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg 183 (347)
.+..+|++|++.|++++++ +++|+||+.||+|+|||+.+ ....+.+|...|.+++|+|++++|++|+.|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~ 108 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG 108 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc
Confidence 4567899999999999985 56999999999999999542 2456788999999999999999999999999
Q ss_pred cEEEEecCCCCCceeeeec--------ccccccceEEeccCCCeEEEEeecc---eeeeeecCCCeeEEEEcCC--CCEE
Q 043707 184 KIRIWKVSRKNPSVHKRVG--------SLPTFKDYVKSSVNPKNYVEVRRNR---NVLKIRHYDAVSCLSLNAE--QGLL 250 (347)
Q Consensus 184 ~I~vwd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~l~~~~~--~~~l 250 (347)
.|++|+............. ..+....++....+....+...... .....+|...+.+++|+++ ..++
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 109 TLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred cceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 9999999876543222111 1112222222333222222111111 1223468899999999886 4678
Q ss_pred EEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccc-----------------
Q 043707 251 YSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGT----------------- 312 (347)
Q Consensus 251 ~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~----------------- 312 (347)
++++.|+.|++||+++++++..+.+|...|.+++|+|++ +|++|+.||.|++||++......
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSS
T ss_pred EEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCC
Confidence 999999999999999999999999999999999999997 99999999999999987532200
Q ss_pred --------------------------eeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 313 --------------------------KHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 313 --------------------------~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
..........|...|++|+|+|++++|++|+.||+
T Consensus 269 ~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~ 329 (340)
T 4aow_A 269 YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNL 329 (340)
T ss_dssp SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSC
T ss_pred ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 00001123467889999999999999999999985
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.1e-29 Score=229.66 Aligned_cols=202 Identities=14% Similarity=0.192 Sum_probs=173.7
Q ss_pred ceeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
....++.+|.+.|++++++ +++|++|+.||+|+|||.. +....+..|...|.+++|+|++.+|++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 4578899999999999974 7799999999999999954 44566778889999999999999999999999999999
Q ss_pred cCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEE
Q 043707 190 VSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKC 269 (347)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~ 269 (347)
+.......... .......|...|.+++|+|++..|++++.|++|++||++++++
T Consensus 135 ~~~~~~~~~~~--------------------------~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~ 188 (354)
T 2pbi_B 135 LTFDKNENMAA--------------------------KKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQL 188 (354)
T ss_dssp CCCCTTCCSGG--------------------------GCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE
T ss_pred Eeccccccccc--------------------------cceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE
Confidence 87543211000 0111235999999999999999999999999999999999999
Q ss_pred EEEEecCCCcEEEEEeCCC--C-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 270 LESINAHDDAINSVVAGFD--S-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 270 ~~~~~~h~~~v~~i~~~~~--~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
+..+.+|...|.++.++|+ + +|++|+.||.|++||++... +...+..|...|++++|+|++.+|++|+.||
T Consensus 189 ~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~ 262 (354)
T 2pbi_B 189 LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ------CVQAFETHESDVNSVRYYPSGDAFASGSDDA 262 (354)
T ss_dssp EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC------EEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc------EEEEecCCCCCeEEEEEeCCCCEEEEEeCCC
Confidence 9999999999999999874 3 99999999999999998543 4566788999999999999999999999998
Q ss_pred C
Q 043707 347 L 347 (347)
Q Consensus 347 ~ 347 (347)
+
T Consensus 263 ~ 263 (354)
T 2pbi_B 263 T 263 (354)
T ss_dssp C
T ss_pred e
Confidence 5
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=1.9e-29 Score=231.31 Aligned_cols=217 Identities=23% Similarity=0.350 Sum_probs=166.2
Q ss_pred cEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeee
Q 043707 125 HIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKR 200 (347)
Q Consensus 125 ~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~ 200 (347)
.|.++++ ++++|++|+.|+.|+|||.. +....+.+|...|.+++|+|++++|++|+.|++|++||+++++......
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 3778776 57899999999999999965 3466788999999999999999999999999999999998876432221
Q ss_pred e-------cccc-cccceEEeccCCCeEE-EEeecceee--------eeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 043707 201 V-------GSLP-TFKDYVKSSVNPKNYV-EVRRNRNVL--------KIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWR 263 (347)
Q Consensus 201 ~-------~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwd 263 (347)
. ...+ ....++....+....+ +........ ..+|...|.+++|+|++.+|++|+.|++|++||
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 1 1112 1122222222222211 111111111 146889999999999999999999999999999
Q ss_pred CCCC------------EEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEE
Q 043707 264 ISDC------------KCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITAL 330 (347)
Q Consensus 264 l~~~------------~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l 330 (347)
+++. .+...+.+|...|.+++|++++ +|++|+.|+.|++||++.+. +...+.+|...|.++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~------~~~~l~~h~~~v~~v 358 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN------PLLMLQGHRNSVISV 358 (393)
T ss_dssp C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC------EEEEEECCSSCEEEE
T ss_pred CCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe------EEEEECCCCCCEEEE
Confidence 9753 4566788999999999999987 99999999999999997543 456778999999999
Q ss_pred EEcc------CCCEEEEecCCCC
Q 043707 331 AVNQ------ESAVVYCGSSDGL 347 (347)
Q Consensus 331 ~~~p------~~~~l~sgs~DG~ 347 (347)
+|++ ++.+|++|+.||+
T Consensus 359 ~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 359 AVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp EECSSCTTCTTCEEEEEEETTSE
T ss_pred EecCCcCcCCCCCEEEEECCCCc
Confidence 9986 6889999999984
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=3.6e-29 Score=242.24 Aligned_cols=249 Identities=18% Similarity=0.203 Sum_probs=183.9
Q ss_pred CCCCCCCCcccccc------------cceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCC----cceeeecC
Q 043707 99 MPPYSPNENLLSSC------------NGLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK----EFSGFKSN 160 (347)
Q Consensus 99 ~~~~~p~~~~~~~~------------~~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~----~~~~~~~h 160 (347)
...|+|+|+.++.. ...+..+.+|.+.|+++++ +|++|++|+.||+|+|||... ....+.+|
T Consensus 23 ~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~ 102 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVF 102 (611)
T ss_dssp CCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECS
T ss_pred EEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeeccc
Confidence 34577887655432 2356778899999998886 578999999999999999642 23467889
Q ss_pred CCCeeEEEEeCCCCEEEEEeCC----CcEEEEecCCCCC------ceeeeecccccccc-eEEeccCCCeEEEEeec-c-
Q 043707 161 SGLVKAIIITGDSNKIFTGHQD----GKIRIWKVSRKNP------SVHKRVGSLPTFKD-YVKSSVNPKNYVEVRRN-R- 227 (347)
Q Consensus 161 ~~~V~~l~~sp~~~~l~s~~~D----g~I~vwd~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~- 227 (347)
.+.|.+++|+|++++|++++.+ +.|++||...... .....+...|.... ++....+....+..... .
T Consensus 103 ~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~ 182 (611)
T 1nr0_A 103 SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF 182 (611)
T ss_dssp SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE
T ss_pred CCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE
Confidence 9999999999999999999875 4788888532211 01112222233222 33333333222221111 1
Q ss_pred eeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEe-------cCCCcEEEEEeCCCC-EEEEEeCCCc
Q 043707 228 NVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESIN-------AHDDAINSVVAGFDS-LVFTGSADGT 299 (347)
Q Consensus 228 ~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~-------~h~~~v~~i~~~~~~-~l~s~~~dg~ 299 (347)
...+.+|...|.+++|+|++.+|++++.|++|++||+.+++++..+. +|.+.|.+++|+|++ +|++++.|++
T Consensus 183 ~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~ 262 (611)
T 1nr0_A 183 KSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT 262 (611)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe
Confidence 12345799999999999999999999999999999999999998884 799999999999998 8999999999
Q ss_pred EEEEEcccCCcccee-------------------------------------eehhhhhccCCcEEEEEEccCCCEEEEe
Q 043707 300 VKVWRRELQGKGTKH-------------------------------------FLAQVLLKQENAITALAVNQESAVVYCG 342 (347)
Q Consensus 300 I~vwd~~~~~~~~~~-------------------------------------~~~~~~~~h~~~V~~l~~~p~~~~l~sg 342 (347)
|++||++........ .+...+.+|...|++++|+|++++|+++
T Consensus 263 v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~ 342 (611)
T 1nr0_A 263 IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSA 342 (611)
T ss_dssp EEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 999999754321000 0223456899999999999999999999
Q ss_pred cCCCC
Q 043707 343 SSDGL 347 (347)
Q Consensus 343 s~DG~ 347 (347)
+.||+
T Consensus 343 s~D~~ 347 (611)
T 1nr0_A 343 DAEGH 347 (611)
T ss_dssp ETTSC
T ss_pred eCCCc
Confidence 99985
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=9.5e-30 Score=232.23 Aligned_cols=227 Identities=21% Similarity=0.339 Sum_probs=173.4
Q ss_pred eeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec
Q 043707 115 LIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV 190 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~ 190 (347)
...++.+|.+.|++++++ +++|++|+.||+|+|||.. +....+..|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 467899999999999874 7799999999999999954 456778899999999999999999999999999999999
Q ss_pred CCCCCc-----ee----------eeecccccccc-eEEeccCCCeEE-EEeecceeee------eecCCCeeEEEEcC-C
Q 043707 191 SRKNPS-----VH----------KRVGSLPTFKD-YVKSSVNPKNYV-EVRRNRNVLK------IRHYDAVSCLSLNA-E 246 (347)
Q Consensus 191 ~~~~~~-----~~----------~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~------~~h~~~V~~l~~~~-~ 246 (347)
...... .. ..+...+.... ++..+.+....+ ++........ .+|...|.+++|++ +
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence 753211 00 00111122122 333333332222 2222222221 46889999999987 7
Q ss_pred CCEEEEEeCCCcEEEEeCC-CCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhh---
Q 043707 247 QGLLYSGSWDKTLKVWRIS-DCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLL--- 321 (347)
Q Consensus 247 ~~~l~s~s~dg~i~vwdl~-~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~--- 321 (347)
+.+|++|+.|++|++||++ ..+++..+.+|...|.+++|+|++ +|++|+.||+|++||++.+.. ...+.
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~------~~~~~~~~ 291 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ------LQVYNREP 291 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE------EEEECCCC
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE------EEEecccc
Confidence 8999999999999999998 557888999999999999999998 999999999999999985432 22221
Q ss_pred ----ccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 322 ----KQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 322 ----~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
.+...|++++|+|++++|++|+.||.
T Consensus 292 ~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 292 DRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp SSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred cccccccCceEEEEECCCCCEEEEEECCCC
Confidence 22345899999999999999999984
No 26
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=8.4e-30 Score=232.57 Aligned_cols=241 Identities=19% Similarity=0.275 Sum_probs=183.5
Q ss_pred CCCCCccccCCCCCCCCC-----CCCCCCCCCCCCCCCccccccc--------------------ceeEeeeeccccEEE
Q 043707 74 GEASPYLMSPWNNQPVSP-----YTKSPWLMPPYSPNENLLSSCN--------------------GLIGSIVRKEGHIYS 128 (347)
Q Consensus 74 ~~~s~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~--------------------~~i~~l~~h~~~V~~ 128 (347)
..+...+...|+...... ..........|+|++..++... .....+.+|.+.|.+
T Consensus 83 s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~ 162 (380)
T 3iz6_a 83 SASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASS 162 (380)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCC
T ss_pred EEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEE
Confidence 334456677776522111 1122234446888887765432 123457789999988
Q ss_pred Eeec---CCEEEEecCCCcEEEEeCCCc--ceee-----ecCCCCeeEEEEeC-CCCEEEEEeCCCcEEEEecCCCCCce
Q 043707 129 LAAS---GDLLYTGSDSKNIRVWKNLKE--FSGF-----KSNSGLVKAIIITG-DSNKIFTGHQDGKIRIWKVSRKNPSV 197 (347)
Q Consensus 129 l~~~---~~~l~tg~~dg~I~vwd~~~~--~~~~-----~~h~~~V~~l~~sp-~~~~l~s~~~Dg~I~vwd~~~~~~~~ 197 (347)
+.+. +..|++|+.|++|++||.... +..+ .+|...|.+++|++ ++++|++|+.||+|++||++......
T Consensus 163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~ 242 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAV 242 (380)
T ss_dssp CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCC
T ss_pred EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcce
Confidence 8864 457999999999999996543 3333 57899999999987 88899999999999999998543211
Q ss_pred eeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCC
Q 043707 198 HKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHD 277 (347)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~ 277 (347)
.. ..+|...|.+++|+|++.+|++|+.||+|++||+++++++..+..+.
T Consensus 243 ~~-------------------------------~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~ 291 (380)
T 3iz6_a 243 RT-------------------------------YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREP 291 (380)
T ss_dssp EE-------------------------------ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCC
T ss_pred EE-------------------------------ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccc
Confidence 11 12599999999999999999999999999999999999998886543
Q ss_pred C-------cEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 278 D-------AINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 278 ~-------~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
. .|.+++|+|++ +|++|+.||.|++||+..... ...+.....+|...|++++|+|++++|++|+.||+
T Consensus 292 ~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 292 DRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM--VLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp SSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE--EEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred cccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce--EEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 2 48999999998 999999999999999875432 11122233679999999999999999999999985
No 27
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-28 Score=220.76 Aligned_cols=244 Identities=17% Similarity=0.220 Sum_probs=183.5
Q ss_pred CCCcccccccceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEE
Q 043707 104 PNENLLSSCNGLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTG 179 (347)
Q Consensus 104 p~~~~~~~~~~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~ 179 (347)
..+....+.......+.+|.+.|+++++ ++++|++|+.||.|++||.. +....+.+|...|.+++|+|++++|+++
T Consensus 13 ~~~~~~~G~~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 92 (369)
T 3zwl_B 13 GENLYFQGSHMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTG 92 (369)
T ss_dssp CCCCCSSCCSEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CcceEEeccccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEE
Confidence 3333333344456778999999999987 57799999999999999954 5577888999999999999999999999
Q ss_pred eCCCcEEEEecCCCCCceeeee-------cccccccceEEeccC-----CC-eEEEEeecc------------eeeeeec
Q 043707 180 HQDGKIRIWKVSRKNPSVHKRV-------GSLPTFKDYVKSSVN-----PK-NYVEVRRNR------------NVLKIRH 234 (347)
Q Consensus 180 ~~Dg~I~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-----~~-~~~~~~~~~------------~~~~~~h 234 (347)
+.||.|++||+.+++....... ...+....++....+ .. .++++.... ......|
T Consensus 93 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
T 3zwl_B 93 SADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH 172 (369)
T ss_dssp ETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC
T ss_pred eCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC
Confidence 9999999999998865433321 112222222222222 11 222222221 1222344
Q ss_pred CC--CeeEEEEcCCCCEEEEEeCCCcEEEEeCCC-CEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCc
Q 043707 235 YD--AVSCLSLNAEQGLLYSGSWDKTLKVWRISD-CKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 235 ~~--~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~-~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~ 310 (347)
.. .+.+++|+|++.+|++++.||.|++||+++ .+.+..+..|...|.+++|+|++ +|++++.|+.|++||++....
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 173 EGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp TTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 44 899999999999999999999999999998 78999999999999999999998 899999999999999975432
Q ss_pred cce-------------------------------------------------eeehhhhhccCCcEEEEEEccCCCEEEE
Q 043707 311 GTK-------------------------------------------------HFLAQVLLKQENAITALAVNQESAVVYC 341 (347)
Q Consensus 311 ~~~-------------------------------------------------~~~~~~~~~h~~~V~~l~~~p~~~~l~s 341 (347)
... ......+.+|...|++++|+|++++|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 332 (369)
T 3zwl_B 253 LKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYAS 332 (369)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEE
Confidence 000 0112234568889999999999999999
Q ss_pred ecCCCC
Q 043707 342 GSSDGL 347 (347)
Q Consensus 342 gs~DG~ 347 (347)
++.||.
T Consensus 333 ~~~dg~ 338 (369)
T 3zwl_B 333 GGEDGF 338 (369)
T ss_dssp EETTSE
T ss_pred EcCCCe
Confidence 999983
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.6e-30 Score=228.10 Aligned_cols=200 Identities=23% Similarity=0.304 Sum_probs=156.9
Q ss_pred eeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC------CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEE
Q 043707 115 LIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL------KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIR 186 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~------~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~ 186 (347)
++..+.+|++.|.++++ ++++|++|+.|++|++||.. +.+..+.+|...|.+++|+|++.+|++|+.|++|+
T Consensus 99 ~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 46678899999999987 47799999999999999973 23456788999999999999999999999999999
Q ss_pred EEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC--CCEEEEEeCCCcEEEEeC
Q 043707 187 IWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE--QGLLYSGSWDKTLKVWRI 264 (347)
Q Consensus 187 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~dg~i~vwdl 264 (347)
+||+..+..... ..+.+|...|.+++|+|+ +.+|++|+.|++|++||+
T Consensus 179 iW~~~~~~~~~~------------------------------~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 179 IWKDYDDDWECV------------------------------AVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp EEEEETTEEEEE------------------------------EEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEE
T ss_pred EEECCCCCeeEE------------------------------EEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEe
Confidence 999875421111 112259999999999998 678999999999999998
Q ss_pred CCC--------EEEEEEec-CCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCC-cEEEEEEcc
Q 043707 265 SDC--------KCLESINA-HDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQEN-AITALAVNQ 334 (347)
Q Consensus 265 ~~~--------~~~~~~~~-h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~-~V~~l~~~p 334 (347)
+.+ .++..+.. |...|.+++|+++++|++++.||.|++||...+.. ......+..|.. .|.+++|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~---~~~~~~~~~h~~~~v~~v~~~~ 305 (330)
T 2hes_X 229 MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEW---KVFAKRALCHGVYEINVVKWLE 305 (330)
T ss_dssp EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEE---EEEEEESCTTTTSCEEEEEEC-
T ss_pred cCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCce---EEEeccccccccceEEEEEEec
Confidence 754 45555654 89999999999888999999999999999864321 112233456776 899999999
Q ss_pred --CCCEEEEecCCCC
Q 043707 335 --ESAVVYCGSSDGL 347 (347)
Q Consensus 335 --~~~~l~sgs~DG~ 347 (347)
++++|++|+.||+
T Consensus 306 ~~~~~~las~s~Dg~ 320 (330)
T 2hes_X 306 LNGKTILATGGDDGI 320 (330)
T ss_dssp ----CCEEEEETTSE
T ss_pred CCCceEEEEecCCCc
Confidence 6899999999984
No 29
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=5.5e-29 Score=223.95 Aligned_cols=231 Identities=17% Similarity=0.240 Sum_probs=168.4
Q ss_pred ceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
.....+.+|...|.++.+ ++.+|++|+.|++|++||.. +....+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 346778899999999887 47799999999999999965 45678889999999999999999999999999999999
Q ss_pred cCCCCCcee----------eeecccccc----------cceEEeccCCCeEEEEeecc---eeeeeecCCCeeEEEEcCC
Q 043707 190 VSRKNPSVH----------KRVGSLPTF----------KDYVKSSVNPKNYVEVRRNR---NVLKIRHYDAVSCLSLNAE 246 (347)
Q Consensus 190 ~~~~~~~~~----------~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~l~~~~~ 246 (347)
+........ ..+...+.. ..++....+.. +.++... .....+|...|.+++|+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~--i~iwd~~~~~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 147 ILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGR--LKVWNTNFQIRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp SSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSE--EEEEETTTEEEEEEECCSSCEEEEEECTT
T ss_pred ccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCE--EEEEcCCCceeEEEcCccccceEEEECCC
Confidence 974321100 011111111 11222222222 2222221 2234579999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCC-CEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeee-------hh
Q 043707 247 QGLLYSGSWDKTLKVWRISD-CKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFL-------AQ 318 (347)
Q Consensus 247 ~~~l~s~s~dg~i~vwdl~~-~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~-------~~ 318 (347)
+++|++|+.||+|++||++. ..+...+. +...|.+++|+|++.+++++.|+.|++||+..........+ ..
T Consensus 225 g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 225 GKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp SSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred CCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 99999999999999999954 44444443 55679999999999666677899999999975432110000 01
Q ss_pred hhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 319 VLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 319 ~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
...+|...|++++|+|++++|++|+.||+
T Consensus 304 ~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~ 332 (343)
T 2xzm_R 304 GQKGKNPQCTSLAWNALGKKLFAGFTDGV 332 (343)
T ss_dssp TBCCSCCCEEEEEECSSSCCEEEEETTSE
T ss_pred hhcCCCCceEEEEECCCCCeEEEecCCce
Confidence 12368889999999999999999999984
No 30
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=5e-29 Score=222.04 Aligned_cols=192 Identities=19% Similarity=0.334 Sum_probs=165.0
Q ss_pred eeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec
Q 043707 115 LIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV 190 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~ 190 (347)
.+..+.+|...|.++.+ ++++|++|+.|++|+|||.. +....+.+|...|.+++|+|++.+|++|+.|++|++||+
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~ 136 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTI 136 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 47788999999998886 57899999999999999965 456788999999999999999999999999999999999
Q ss_pred CCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC------CCEEEEEeCCCcEEEEeC
Q 043707 191 SRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE------QGLLYSGSWDKTLKVWRI 264 (347)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~------~~~l~s~s~dg~i~vwdl 264 (347)
+.... ....+|...|.+++|.|. +..|++++.|++|++||+
T Consensus 137 ~~~~~---------------------------------~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~ 183 (319)
T 3frx_A 137 KGQCL---------------------------------ATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNL 183 (319)
T ss_dssp TSCEE---------------------------------EEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEET
T ss_pred CCCeE---------------------------------EEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEEC
Confidence 64311 111258999999999985 458999999999999999
Q ss_pred CCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 265 SDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 265 ~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
++++....+.+|...|.+++|+|++ +|++|+.||.|++||++... ....+. +...|.+++|+|++.+|++++
T Consensus 184 ~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~------~~~~~~-~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 184 NQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK------AMYTLS-AQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp TTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE------EEEEEE-CCSCEEEEEECSSSSEEEEEE
T ss_pred CcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc------EEEEec-CCCcEEEEEEcCCCCEEEEEc
Confidence 9999999999999999999999998 99999999999999998543 233333 346899999999999999988
Q ss_pred CCC
Q 043707 344 SDG 346 (347)
Q Consensus 344 ~DG 346 (347)
.++
T Consensus 257 ~~~ 259 (319)
T 3frx_A 257 ATG 259 (319)
T ss_dssp TTE
T ss_pred CCC
Confidence 764
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=2.4e-29 Score=241.19 Aligned_cols=206 Identities=21% Similarity=0.406 Sum_probs=177.2
Q ss_pred CCCCCCcccccc------------cceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC-CcceeeecCCCCee
Q 043707 101 PYSPNENLLSSC------------NGLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL-KEFSGFKSNSGLVK 165 (347)
Q Consensus 101 ~~~p~~~~~~~~------------~~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~-~~~~~~~~h~~~V~ 165 (347)
.|+|++..++.. ..++..+.+|...|.++++ ++++|++|+.|+.|++||.. +.+..+.+|...|.
T Consensus 351 ~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~ 430 (577)
T 2ymu_A 351 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVW 430 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEE
T ss_pred EECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeE
Confidence 567777665432 2367778889999999886 57899999999999999954 45677889999999
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC
Q 043707 166 AIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA 245 (347)
Q Consensus 166 ~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~ 245 (347)
+++|+|++++|++++.|++|++||..... .. ...+|...|.+++|+|
T Consensus 431 ~~~~s~d~~~l~~~~~d~~v~~w~~~~~~-~~--------------------------------~~~~~~~~v~~~~~sp 477 (577)
T 2ymu_A 431 GVAFSPDDQTIASASDDKTVKLWNRNGQL-LQ--------------------------------TLTGHSSSVRGVAFSP 477 (577)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTSCE-EE--------------------------------EEECCSSCEEEEEECT
T ss_pred EEEECCCCCEEEEEcCCCEEEEEECCCCE-EE--------------------------------EEcCCCCCEEEEEEcC
Confidence 99999999999999999999999974321 11 1125899999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccC
Q 043707 246 EQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQE 324 (347)
Q Consensus 246 ~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~ 324 (347)
++++|++++.|++|++||. +++++..+.+|...|++++|+|++ +|++++.||.|+|||.. ++ ++..+.+|.
T Consensus 478 d~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~--~~-----~~~~~~~h~ 549 (577)
T 2ymu_A 478 DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQ-----LLQTLTGHS 549 (577)
T ss_dssp TSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT--SC-----EEEEEECCS
T ss_pred CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC--CC-----EEEEEcCCC
Confidence 9999999999999999995 688999999999999999999998 89999999999999964 22 567788999
Q ss_pred CcEEEEEEccCCCEEEEecCCCC
Q 043707 325 NAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 325 ~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
..|++|+|+||+++|++++.||+
T Consensus 550 ~~v~~~~fs~dg~~l~s~~~D~~ 572 (577)
T 2ymu_A 550 SSVWGVAFSPDGQTIASASSDKT 572 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSC
T ss_pred CCEEEEEEcCCCCEEEEEeCCCE
Confidence 99999999999999999999985
No 32
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=5.7e-30 Score=237.82 Aligned_cols=199 Identities=15% Similarity=0.167 Sum_probs=163.0
Q ss_pred eeEeeeeccccEEEEeec---CCEEEEecCCCcEEEEeCCCc----ceeeecCCCCeeEEEEeC-CCCEEEEEeCCCcEE
Q 043707 115 LIGSIVRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNLKE----FSGFKSNSGLVKAIIITG-DSNKIFTGHQDGKIR 186 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~~~----~~~~~~h~~~V~~l~~sp-~~~~l~s~~~Dg~I~ 186 (347)
+......|+..|+||+|+ +++||+|+.||.|+|||.... ...+.+|.+.|.+|+|+| ++++|++|+.||+|+
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~ 190 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR 190 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE
Confidence 455677899999999985 469999999999999996422 344568999999999998 788999999999999
Q ss_pred EEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 043707 187 IWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISD 266 (347)
Q Consensus 187 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~ 266 (347)
+||++++........ ..+...+.+++|++++.+|++|+.||.|++||++
T Consensus 191 iwd~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~- 239 (435)
T 4e54_B 191 LQDFKGNILRVFASS------------------------------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD- 239 (435)
T ss_dssp EEETTSCEEEEEECC------------------------------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-
T ss_pred EeeccCCceeEEecc------------------------------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-
Confidence 999976532111100 0144567899999999999999999999999986
Q ss_pred CEEEEEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 267 CKCLESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 267 ~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
++++..+.+|...|.+++|+|++ +|++|+.|+.|+|||++.... ........+|...|++|+|+|++.+|++|+.
T Consensus 240 ~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~---~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 240 GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG---KASFLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS---SSCCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccc---cceEEEeeeccccccceeECCCCCeeEEEcC
Confidence 56777889999999999999986 788999999999999985432 1123344679999999999999999999999
Q ss_pred CCC
Q 043707 345 DGL 347 (347)
Q Consensus 345 DG~ 347 (347)
||+
T Consensus 317 D~~ 319 (435)
T 4e54_B 317 KSE 319 (435)
T ss_dssp SSC
T ss_pred CCE
Confidence 984
No 33
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=7.4e-29 Score=221.23 Aligned_cols=231 Identities=14% Similarity=0.145 Sum_probs=163.7
Q ss_pred EeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCC------cceeeecCCCCeeEEEEeC--CCCEEEEEeCCCcEE
Q 043707 117 GSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK------EFSGFKSNSGLVKAIIITG--DSNKIFTGHQDGKIR 186 (347)
Q Consensus 117 ~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~------~~~~~~~h~~~V~~l~~sp--~~~~l~s~~~Dg~I~ 186 (347)
..+.+|++.|+++++ ++++|++|+.||.|++||... ....+.+|...|.+++|+| ++++|++|+.||.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 356789999999997 477999999999999999652 3556778999999999999 589999999999999
Q ss_pred EEecCCCCCce-------eeeec----------cccc--ccceEEeccCCCeE-EEEeecceeee--------------e
Q 043707 187 IWKVSRKNPSV-------HKRVG----------SLPT--FKDYVKSSVNPKNY-VEVRRNRNVLK--------------I 232 (347)
Q Consensus 187 vwd~~~~~~~~-------~~~~~----------~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~--------------~ 232 (347)
+||++.++... ..... ..+. ...++....+.... +++........ .
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99998764211 11111 1111 11111111111111 11111111100 0
Q ss_pred ecCCCeeEEEEcCC---CCEEEEEeCCCcEEEEeCCCCEE--EEEEecCCCcEEEEEeCCCC-----EEEEEeCCCcEEE
Q 043707 233 RHYDAVSCLSLNAE---QGLLYSGSWDKTLKVWRISDCKC--LESINAHDDAINSVVAGFDS-----LVFTGSADGTVKV 302 (347)
Q Consensus 233 ~h~~~V~~l~~~~~---~~~l~s~s~dg~i~vwdl~~~~~--~~~~~~h~~~v~~i~~~~~~-----~l~s~~~dg~I~v 302 (347)
.|...+.+++|+|+ +.+|++++.|+.+.+|+...++. +..+.+|...|.+++|+|++ +|++++.||.|++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 35566777777775 67777777777776666665543 67778899999999999995 8999999999999
Q ss_pred EEcccCCc----------------------------------------cceeeehhhhhccCCcEEEEEEccCCCEEEEe
Q 043707 303 WRRELQGK----------------------------------------GTKHFLAQVLLKQENAITALAVNQESAVVYCG 342 (347)
Q Consensus 303 wd~~~~~~----------------------------------------~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sg 342 (347)
||++.... .....+...+.+|...|++++|+|++++|++|
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 99985321 01123556677899999999999999999999
Q ss_pred cCCCC
Q 043707 343 SSDGL 347 (347)
Q Consensus 343 s~DG~ 347 (347)
+.||.
T Consensus 325 ~~dg~ 329 (351)
T 3f3f_A 325 GDDGK 329 (351)
T ss_dssp ETTSC
T ss_pred cCCCc
Confidence 99984
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.3e-29 Score=230.23 Aligned_cols=201 Identities=12% Similarity=0.049 Sum_probs=162.5
Q ss_pred ceeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCCC-----cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEE
Q 043707 114 GLIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNLK-----EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIR 186 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~~-----~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~ 186 (347)
..+..+.+|.+.|.+++++ +++|++|+.||.|++||... ....+..|...|.+++|+|++++|++|+.|+.|+
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 125 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS 125 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE
Confidence 3567788899999999875 67999999999999999653 3556778999999999999999999999999999
Q ss_pred EEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeee-cCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 043707 187 IWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIR-HYDAVSCLSLNAEQGLLYSGSWDKTLKVWRIS 265 (347)
Q Consensus 187 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~ 265 (347)
+||++.++...... .... |...|.+++|+|++.+|++++.|++|++||++
T Consensus 126 iwd~~~~~~~~~~~-----------------------------~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 126 VCYFEQENDWWVSK-----------------------------HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp ECCC-----CCCCE-----------------------------EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred EEEECCcccceeee-----------------------------EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 99998775210000 0113 88999999999999999999999999999985
Q ss_pred ------------------CCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCc
Q 043707 266 ------------------DCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENA 326 (347)
Q Consensus 266 ------------------~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~ 326 (347)
.++++..+ .|...|.+++|+|++ +|++++.||.|++||++.... .......+..|...
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~~ 253 (377)
T 3dwl_C 177 VRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ--PPRALITVKLSQLP 253 (377)
T ss_dssp CSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS--CEEECCCEECSSSC
T ss_pred ecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC--cceeeEeecCCCCc
Confidence 35677777 899999999999998 899999999999999986542 12236778889999
Q ss_pred EEEEEEccCCCEEEEecCCC
Q 043707 327 ITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 327 V~~l~~~p~~~~l~sgs~DG 346 (347)
|++++|+|++++|++|+.|+
T Consensus 254 v~~~~~s~~~~~l~~~~~~~ 273 (377)
T 3dwl_C 254 LRSLLWANESAIVAAGYNYS 273 (377)
T ss_dssp EEEEEEEETTEEEEEESSSS
T ss_pred eEEEEEcCCCCEEEEEcCCc
Confidence 99999999999999998776
No 35
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1e-28 Score=223.59 Aligned_cols=201 Identities=21% Similarity=0.211 Sum_probs=169.1
Q ss_pred eeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC----CcceeeecCCCCeeEEEEeCC--CCEEEEEeCCCcEE
Q 043707 115 LIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL----KEFSGFKSNSGLVKAIIITGD--SNKIFTGHQDGKIR 186 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~----~~~~~~~~h~~~V~~l~~sp~--~~~l~s~~~Dg~I~ 186 (347)
++..+.+|.+.|++++++ +++|++|+.||.|+|||.. +....+.+|...|.+++|+++ +++|++|+.||.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 567889999999999875 7899999999999999964 335677889999999999986 89999999999999
Q ss_pred EEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC--CCEEEEEeCCCcEEEEeC
Q 043707 187 IWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE--QGLLYSGSWDKTLKVWRI 264 (347)
Q Consensus 187 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~--~~~l~s~s~dg~i~vwdl 264 (347)
+||+.+++...... ...|...|.+++|+|+ +.+|++++.|+.|++||+
T Consensus 83 iwd~~~~~~~~~~~------------------------------~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 83 IWKEENGRWSQIAV------------------------------HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 132 (379)
T ss_dssp EEEEETTEEEEEEE------------------------------ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred EEEcCCCceeEeee------------------------------ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEec
Confidence 99998764211111 1248899999999999 999999999999999999
Q ss_pred CCCE--EEEEEecCCCcEEEEEeCC-------------CC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEE
Q 043707 265 SDCK--CLESINAHDDAINSVVAGF-------------DS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAIT 328 (347)
Q Consensus 265 ~~~~--~~~~~~~h~~~v~~i~~~~-------------~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~ 328 (347)
++.+ ....+..|...|.+++|+| ++ +|++++.||.|++||++.... ...+...+.+|...|+
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~h~~~v~ 210 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ--TYVLESTLEGHSDWVR 210 (379)
T ss_dssp CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT--EEEEEEEECCCSSCEE
T ss_pred CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc--ceeeEEEEecccCcEe
Confidence 8873 4456778999999999999 45 999999999999999985543 3345567778999999
Q ss_pred EEEEccC---CCEEEEecCCCC
Q 043707 329 ALAVNQE---SAVVYCGSSDGL 347 (347)
Q Consensus 329 ~l~~~p~---~~~l~sgs~DG~ 347 (347)
+++|+|+ +.+|++++.||.
T Consensus 211 ~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 211 DVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp EEEECCCCSSSEEEEEEETTSC
T ss_pred EEEECCCCCCCCeEEEEeCCCE
Confidence 9999999 899999999984
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-28 Score=220.86 Aligned_cols=202 Identities=16% Similarity=0.214 Sum_probs=169.1
Q ss_pred eeEeeeeccccEEEEeec----CCEEEEecCCCcEEEEeCCC----cceeeecCCCCeeEEEEeCC--CCEEEEEeCCCc
Q 043707 115 LIGSIVRKEGHIYSLAAS----GDLLYTGSDSKNIRVWKNLK----EFSGFKSNSGLVKAIIITGD--SNKIFTGHQDGK 184 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~----~~~l~tg~~dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp~--~~~l~s~~~Dg~ 184 (347)
.+..+.+|.+.|+++.++ +++|++|+.||.|++||... ....+..|...|.+++|+|+ +.+|++++.||.
T Consensus 47 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~ 126 (379)
T 3jrp_A 47 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 126 (379)
T ss_dssp EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCc
Confidence 556788899999999975 78999999999999999543 45667789999999999998 999999999999
Q ss_pred EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC-------------CCCEEE
Q 043707 185 IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA-------------EQGLLY 251 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~-------------~~~~l~ 251 (347)
|++||++......... ...|...|.+++|+| ++.+|+
T Consensus 127 i~v~d~~~~~~~~~~~------------------------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~ 176 (379)
T 3jrp_A 127 VSVVEFKENGTTSPII------------------------------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFV 176 (379)
T ss_dssp EEEEECCTTSCCCEEE------------------------------EECCTTCEEEEEECCCC----------CTTCEEE
T ss_pred EEEEecCCCCceeeEE------------------------------ecCCCCceEEEEEcCccccccccccCCCCCCEEE
Confidence 9999998774322221 124889999999999 699999
Q ss_pred EEeCCCcEEEEeCCCCE----EEEEEecCCCcEEEEEeCCC---C-EEEEEeCCCcEEEEEcccCCccceeeehhhhhcc
Q 043707 252 SGSWDKTLKVWRISDCK----CLESINAHDDAINSVVAGFD---S-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQ 323 (347)
Q Consensus 252 s~s~dg~i~vwdl~~~~----~~~~~~~h~~~v~~i~~~~~---~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h 323 (347)
+++.||.|++||+++++ ++..+.+|...|.+++|+|+ + +|++++.||.|++||++..... ..........|
T Consensus 177 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~ 255 (379)
T 3jrp_A 177 TGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP-WKKTLLKEEKF 255 (379)
T ss_dssp EEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC-CEEEESSSSCC
T ss_pred EEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc-ceeeeeccccC
Confidence 99999999999997653 56778899999999999998 6 8999999999999999865321 11223334558
Q ss_pred CCcEEEEEEccCCCEEEEecCCCC
Q 043707 324 ENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 324 ~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
...|++++|+|++++|++++.||.
T Consensus 256 ~~~v~~~~~s~~g~~l~~~~~dg~ 279 (379)
T 3jrp_A 256 PDVLWRASWSLSGNVLALSGGDNK 279 (379)
T ss_dssp SSCEEEEEECSSSCCEEEEESSSS
T ss_pred CCcEEEEEEcCCCCEEEEecCCCc
Confidence 889999999999999999999984
No 37
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=5.4e-28 Score=234.01 Aligned_cols=213 Identities=15% Similarity=0.159 Sum_probs=165.1
Q ss_pred EEeecCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec---
Q 043707 128 SLAASGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG--- 202 (347)
Q Consensus 128 ~l~~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~--- 202 (347)
++.++|++|++++ ++.|+||+.. +....+.+|...|.+++|+|+|++|++|+.||+|+|||+.+++........
T Consensus 25 ~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~ 103 (611)
T 1nr0_A 25 GNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFS 103 (611)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSS
T ss_pred eeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccC
Confidence 4556788999998 5699999964 457788999999999999999999999999999999999765433222211
Q ss_pred -------ccccccceEEeccCCC--eEEEEeec--ceeeeeecCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCEEE
Q 043707 203 -------SLPTFKDYVKSSVNPK--NYVEVRRN--RNVLKIRHYDAVSCLSLNAEQG-LLYSGSWDKTLKVWRISDCKCL 270 (347)
Q Consensus 203 -------~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~dg~i~vwdl~~~~~~ 270 (347)
..|....++....+.. ..+.++.. ....+.+|...|.+++|+|++. .|++|+.|++|++||.++++++
T Consensus 104 ~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~ 183 (611)
T 1nr0_A 104 GPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK 183 (611)
T ss_dssp SCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE
T ss_pred CceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEe
Confidence 1122222222222111 12222221 1123457999999999999986 6999999999999999999999
Q ss_pred EEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhh-------hccCCcEEEEEEccCCCEEEEe
Q 043707 271 ESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVL-------LKQENAITALAVNQESAVVYCG 342 (347)
Q Consensus 271 ~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~-------~~h~~~V~~l~~~p~~~~l~sg 342 (347)
..+.+|...|.+++|+|++ +|++|+.|++|++||+..+.. ...+ .+|...|++++|+|++++|++|
T Consensus 184 ~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~------~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~ 257 (611)
T 1nr0_A 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK------TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASA 257 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE------EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEE
T ss_pred eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE------eeeeccccccccccCCCEEEEEECCCCCEEEEE
Confidence 9999999999999999998 999999999999999875432 2222 2799999999999999999999
Q ss_pred cCCCC
Q 043707 343 SSDGL 347 (347)
Q Consensus 343 s~DG~ 347 (347)
+.||+
T Consensus 258 s~D~~ 262 (611)
T 1nr0_A 258 SADKT 262 (611)
T ss_dssp ETTSE
T ss_pred eCCCe
Confidence 99984
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=2.1e-28 Score=240.36 Aligned_cols=195 Identities=22% Similarity=0.390 Sum_probs=166.7
Q ss_pred eeEeeeeccccEEEEeec---CCEEEEecCCCcEEEEeCCC-------cceeeecCCCCeeEEEEeCCCCEEEEEeCCCc
Q 043707 115 LIGSIVRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNLK-------EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGK 184 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~~-------~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~ 184 (347)
+...+.+|.+.|++++++ +++|++|+.||+|++|+... ....+.+|...|.+++|+|++++|++|+.||+
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 456789999999999975 46999999999999999643 23567899999999999999999999999999
Q ss_pred EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 043707 185 IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRI 264 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl 264 (347)
|+|||+.++.... ...+|...|.+++|+|++.+|++++.|++|+|||+
T Consensus 454 v~vwd~~~~~~~~--------------------------------~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 454 LRLWDLAAGVSTR--------------------------------RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEETTTTEEEE--------------------------------EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEEEECCCCccee--------------------------------EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 9999998764221 12259999999999999999999999999999998
Q ss_pred CCCEEEEEE---ecCCCcEEEEEeCCCC---EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCE
Q 043707 265 SDCKCLESI---NAHDDAINSVVAGFDS---LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAV 338 (347)
Q Consensus 265 ~~~~~~~~~---~~h~~~v~~i~~~~~~---~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~ 338 (347)
......... .+|...|.+++|+|++ .|++++.|++|++||++... +...+.+|...|++++|+|++++
T Consensus 502 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~------~~~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 502 LGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK------LRSTLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp TSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC------EEEEECCCSSCEEEEEECTTSSE
T ss_pred CCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc------EEEEEcCCCCCEEEEEEeCCCCE
Confidence 765443332 3688899999999985 79999999999999997443 45677889999999999999999
Q ss_pred EEEecCCCC
Q 043707 339 VYCGSSDGL 347 (347)
Q Consensus 339 l~sgs~DG~ 347 (347)
|++|+.||+
T Consensus 576 l~sg~~Dg~ 584 (694)
T 3dm0_A 576 CASGGKDGV 584 (694)
T ss_dssp EEEEETTSB
T ss_pred EEEEeCCCe
Confidence 999999984
No 39
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=2.1e-27 Score=210.42 Aligned_cols=228 Identities=20% Similarity=0.280 Sum_probs=174.3
Q ss_pred ceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
..+..+.+|...|.++.+ ++++|++|+.||.|++||.. +....+.+|...|.+++|+|++++|++|+.||.|++||
T Consensus 56 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 56 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 135 (312)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 356778889999999987 47799999999999999965 45677889999999999999999999999999999999
Q ss_pred cCCCCCceeeee--------cccccccceEEeccCCCeEE-EEeecceee--eeecCCCeeEEEEcCCCCEEEEEeCCCc
Q 043707 190 VSRKNPSVHKRV--------GSLPTFKDYVKSSVNPKNYV-EVRRNRNVL--KIRHYDAVSCLSLNAEQGLLYSGSWDKT 258 (347)
Q Consensus 190 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~h~~~V~~l~~~~~~~~l~s~s~dg~ 258 (347)
+++++....... ...+....++....+....+ +........ ...+...+.+++|+|++.+|++++.|+.
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~ 215 (312)
T 4ery_A 136 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT 215 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE
T ss_pred CCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe
Confidence 998764322211 11122222333333332222 222222221 2246678999999999999999999999
Q ss_pred EEEEeCCCCEEEEEEecCCCcEEEE--Ee-CCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEcc
Q 043707 259 LKVWRISDCKCLESINAHDDAINSV--VA-GFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQ 334 (347)
Q Consensus 259 i~vwdl~~~~~~~~~~~h~~~v~~i--~~-~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p 334 (347)
|++||+++++++..+.+|...+.++ .+ .+++ +|++|+.||.|++||++... +...+.+|...|.+++|+|
T Consensus 216 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~------~~~~~~~h~~~v~~~~~~p 289 (312)
T 4ery_A 216 LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE------IVQKLQGHTDVVISTACHP 289 (312)
T ss_dssp EEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC------EEEEECCCSSCEEEEEECS
T ss_pred EEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch------hhhhhhccCCcEEEEeecC
Confidence 9999999999999999887654322 33 3444 89999999999999997543 5677889999999999999
Q ss_pred CCCEEEEec--CCCC
Q 043707 335 ESAVVYCGS--SDGL 347 (347)
Q Consensus 335 ~~~~l~sgs--~DG~ 347 (347)
++.+|++++ .||+
T Consensus 290 ~~~~l~s~~~~~d~~ 304 (312)
T 4ery_A 290 TENIIASAALENDKT 304 (312)
T ss_dssp SSSEEEEEECTTTCC
T ss_pred cCCceEEEEccCCcc
Confidence 999999987 5764
No 40
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=5.3e-28 Score=220.94 Aligned_cols=227 Identities=12% Similarity=0.169 Sum_probs=179.7
Q ss_pred ceeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCCC--------cceeeecCCCCeeEEEEeCC----C---CEEEE
Q 043707 114 GLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLK--------EFSGFKSNSGLVKAIIITGD----S---NKIFT 178 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~~--------~~~~~~~h~~~V~~l~~sp~----~---~~l~s 178 (347)
.....+.+|.+.|+++++++++|++|+.||.|++|+... ....+..|...|.+++|+|+ + ++|++
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEEEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 346677899999999999999999999999999999542 46678899999999999999 9 99999
Q ss_pred EeCCCcEEEEecCCCCC-----ceeee-------------eccc----ccccc-eEEeccCCCe-EEEEee------cce
Q 043707 179 GHQDGKIRIWKVSRKNP-----SVHKR-------------VGSL----PTFKD-YVKSSVNPKN-YVEVRR------NRN 228 (347)
Q Consensus 179 ~~~Dg~I~vwd~~~~~~-----~~~~~-------------~~~~----~~~~~-~~~~~~~~~~-~~~~~~------~~~ 228 (347)
++.||.|++||+.+++. ..... +... +.... ++....+... ++++.. ...
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccce
Confidence 99999999999988764 22111 1111 22223 3333333332 233333 222
Q ss_pred e------ee-------eecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEec---C---CCcEEEEEeCCCC
Q 043707 229 V------LK-------IRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINA---H---DDAINSVVAGFDS 289 (347)
Q Consensus 229 ~------~~-------~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~---h---~~~v~~i~~~~~~ 289 (347)
. .. ..|...|.+++|+|++ +|++++.||.|++||+++++++..+.. | ...|.+++|+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~ 245 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG 245 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC
Confidence 2 22 2378899999999999 999999999999999999999999998 9 9999999999987
Q ss_pred -EEEEEeCC---CcEEEEEcccCCccceeeehhhhhc-------------cCCcEEEEEEccCCCEEEEecCCCC
Q 043707 290 -LVFTGSAD---GTVKVWRRELQGKGTKHFLAQVLLK-------------QENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 290 -~l~s~~~d---g~I~vwd~~~~~~~~~~~~~~~~~~-------------h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+|++++.| +.|++||++... ....+.. |...|.+++|+|++++|++++.||.
T Consensus 246 ~~l~~~~~d~~~g~i~i~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 314 (397)
T 1sq9_A 246 SLLAIAHDSNSFGCITLYETEFGE------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGK 314 (397)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCC------EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSE
T ss_pred CEEEEEecCCCCceEEEEECCCCc------ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCe
Confidence 89999999 999999998543 3445555 8999999999999999999999973
No 41
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6e-29 Score=235.41 Aligned_cols=193 Identities=13% Similarity=0.152 Sum_probs=160.6
Q ss_pred EeeeeccccEEEEeecC--------CEEEEecCCCcEEEEeCCCc-------------ceeeecCCCCeeEEEEeCCCCE
Q 043707 117 GSIVRKEGHIYSLAASG--------DLLYTGSDSKNIRVWKNLKE-------------FSGFKSNSGLVKAIIITGDSNK 175 (347)
Q Consensus 117 ~~l~~h~~~V~~l~~~~--------~~l~tg~~dg~I~vwd~~~~-------------~~~~~~h~~~V~~l~~sp~~~~ 175 (347)
.++.+|.+.|.+++|++ .+||+|+.||+|+|||+... ...+.+|...|.+++|++++ .
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 34667788999998763 59999999999999996432 23567899999999999864 8
Q ss_pred EEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEE--EEcCCC-CEEEE
Q 043707 176 IFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCL--SLNAEQ-GLLYS 252 (347)
Q Consensus 176 l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l--~~~~~~-~~l~s 252 (347)
|++|+.||+|++||++++...... ..+|...|.+| +|++++ .+|++
T Consensus 280 lasgs~DgtV~lWD~~~~~~~~~~-------------------------------~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 280 VVCGFKNGFVAEFDLTDPEVPSFY-------------------------------DQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp EEEEETTSEEEEEETTBCSSCSEE-------------------------------EECSSSCEEEEEEECCTTSCCEEEE
T ss_pred EEEEeCCCEEEEEECCCCCCceEE-------------------------------eecccccEEEEEEEcCCCCCeEEEE
Confidence 999999999999999875321111 12599999999 578887 89999
Q ss_pred EeCCCcEEEEeCCCCEEEEEEecCCC--cEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEE
Q 043707 253 GSWDKTLKVWRISDCKCLESINAHDD--AINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITA 329 (347)
Q Consensus 253 ~s~dg~i~vwdl~~~~~~~~~~~h~~--~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~ 329 (347)
++.|++|+|||+++++++..+.+|.. .|.+++|+|++ .|++++.|++|++||++... ....+.+|...|++
T Consensus 329 ~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~------~~~~l~gH~~~V~s 402 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF------AVHPLVSRETTITA 402 (524)
T ss_dssp EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTT------CCEEEEECSSCEEE
T ss_pred eccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccc------cceeeecCCCceEE
Confidence 99999999999999888777777753 58899999987 88999999999999998543 34567789999999
Q ss_pred EEEccCCCEEEEecCCCC
Q 043707 330 LAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 330 l~~~p~~~~l~sgs~DG~ 347 (347)
|+|+|++++|++|+.||+
T Consensus 403 va~Sp~g~~l~Sgs~Dgt 420 (524)
T 2j04_B 403 IGVSRLHPMVLAGSADGS 420 (524)
T ss_dssp EECCSSCCBCEEEETTTE
T ss_pred EEeCCCCCeEEEEECCCE
Confidence 999999999999999984
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=4.5e-28 Score=219.36 Aligned_cols=194 Identities=22% Similarity=0.329 Sum_probs=153.4
Q ss_pred eccccEEEEee--cCCEEEEecC------CCcEEEEeCCC------cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEE
Q 043707 121 RKEGHIYSLAA--SGDLLYTGSD------SKNIRVWKNLK------EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIR 186 (347)
Q Consensus 121 ~h~~~V~~l~~--~~~~l~tg~~------dg~I~vwd~~~------~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~ 186 (347)
.|++.|.+++| +|++|++|+. |+.|++|+... .......|...|.+++|+|++ .+++++.||+|+
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~ 118 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVASDSGAVE 118 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEETTSCEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEECCCEEE
Confidence 58889998886 6889999998 77899998432 233456788999999999997 567788999999
Q ss_pred EEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 043707 187 IWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISD 266 (347)
Q Consensus 187 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~ 266 (347)
|||+.+++....... ...+|...|++++|+|++++|++|+.|++|++||+++
T Consensus 119 lWd~~~~~~~~~~~~----------------------------~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~ 170 (357)
T 4g56_B 119 LWEILEKESLLVNKF----------------------------AKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ 170 (357)
T ss_dssp EC--------CCCCE----------------------------EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EeeccccceeEEEee----------------------------ccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 999988754322111 1125899999999999999999999999999999999
Q ss_pred CEEEEEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCC-CEEEEec
Q 043707 267 CKCLESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQES-AVVYCGS 343 (347)
Q Consensus 267 ~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~-~~l~sgs 343 (347)
++++..+++|...|.+++|++++ ++++++.|+.|++||++.... ........|...|++++|+|++ .+|++|+
T Consensus 171 ~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~----~~~~~~~~~~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 171 KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP----ATRIDFCASDTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC----BCBCCCTTCCSCEEEEEECTTSTTEEEEEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce----eeeeeeccccccccchhhhhcccceEEEee
Confidence 99999999999999999999875 889999999999999985542 1222344567789999999975 7899999
Q ss_pred CCCC
Q 043707 344 SDGL 347 (347)
Q Consensus 344 ~DG~ 347 (347)
.||.
T Consensus 247 ~d~~ 250 (357)
T 4g56_B 247 ETGN 250 (357)
T ss_dssp SSSC
T ss_pred cccc
Confidence 9874
No 43
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=4.5e-28 Score=218.34 Aligned_cols=195 Identities=22% Similarity=0.350 Sum_probs=153.1
Q ss_pred ceeEeeeeccccEEEEeec-----CCEEEEecCCCcEEEEeCCC---cc-eeeecCCCCeeEEEEeCCCCEEEEEeCCCc
Q 043707 114 GLIGSIVRKEGHIYSLAAS-----GDLLYTGSDSKNIRVWKNLK---EF-SGFKSNSGLVKAIIITGDSNKIFTGHQDGK 184 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~-----~~~l~tg~~dg~I~vwd~~~---~~-~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~ 184 (347)
..+..+.+|.+.|++++++ |++|++|+.||.|+|||... .. ..+.+|.+.|.+++|+|++++|++++.||.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 3467788999999999975 37999999999999999653 23 678889999999999999999999999999
Q ss_pred EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEE--cCCCCEEEEEeCCCcEEEE
Q 043707 185 IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSL--NAEQGLLYSGSWDKTLKVW 262 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~--~~~~~~l~s~s~dg~i~vw 262 (347)
|++||+++++.... ..|...|.+++| ++++.+|++++.||.|++|
T Consensus 110 v~iwd~~~~~~~~~---------------------------------~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 110 AKMWDLSSNQAIQI---------------------------------AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp EEEEETTTTEEEEE---------------------------------EECSSCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred EEEEEcCCCCceee---------------------------------ccccCceEEEEEEeCCCCCEEEEccCCCcEEEE
Confidence 99999987753221 135555666666 5555556666666666666
Q ss_pred eCCCCE--------------------------------------------------------------------------
Q 043707 263 RISDCK-------------------------------------------------------------------------- 268 (347)
Q Consensus 263 dl~~~~-------------------------------------------------------------------------- 268 (347)
|+++++
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (368)
T 3mmy_A 157 DTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI 236 (368)
T ss_dssp CSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEET
T ss_pred ECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecC
Confidence 654432
Q ss_pred ----------------EEEEEecCCC------------cEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhh
Q 043707 269 ----------------CLESINAHDD------------AINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQV 319 (347)
Q Consensus 269 ----------------~~~~~~~h~~------------~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~ 319 (347)
.+..+..|.. .|.+++|+|++ +|++++.||.|++||++... ++..
T Consensus 237 dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~------~~~~ 310 (368)
T 3mmy_A 237 EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART------KLKT 310 (368)
T ss_dssp TSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE------EEEE
T ss_pred CCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc------EEEE
Confidence 2334444544 69999999998 99999999999999998543 5667
Q ss_pred hhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 320 LLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 320 ~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+..|...|++++|+|++++|++|+.||.
T Consensus 311 ~~~~~~~v~~~~~s~~g~~l~~~s~d~~ 338 (368)
T 3mmy_A 311 SEQLDQPISACCFNHNGNIFAYASSYDW 338 (368)
T ss_dssp CCCCSSCEEEEEECTTSSCEEEEECCCS
T ss_pred ecCCCCCceEEEECCCCCeEEEEecccc
Confidence 7789999999999999999999999873
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=5.8e-29 Score=225.98 Aligned_cols=197 Identities=13% Similarity=0.117 Sum_probs=156.5
Q ss_pred eeccccEEEEee--cCCEEEEecCCCcEEEEeCC----CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCC
Q 043707 120 VRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL----KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 120 ~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~----~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~ 193 (347)
..|.+.|+++++ ++++|++|+.|+.|+|||.. +....+.+|...|.+++|+|++++|++|+.||+|++||+.++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 346677888776 57899999999999999954 456778899999999999999999999999999999999877
Q ss_pred C-CceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE---E
Q 043707 194 N-PSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK---C 269 (347)
Q Consensus 194 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~---~ 269 (347)
+ ..... ...+|...|.+++|+|++.+|++++.|++|++||+++++ .
T Consensus 88 ~~~~~~~------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 137 (377)
T 3dwl_C 88 GTWKQTL------------------------------VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWV 137 (377)
T ss_dssp -CCCCEE------------------------------ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCC
T ss_pred Cceeeee------------------------------EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccccee
Confidence 5 11111 112489999999999999999999999999999999887 4
Q ss_pred EEEEec-CCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCcc------------ceeeehhhhhccCCcEEEEEEccC
Q 043707 270 LESINA-HDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKG------------TKHFLAQVLLKQENAITALAVNQE 335 (347)
Q Consensus 270 ~~~~~~-h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~------------~~~~~~~~~~~h~~~V~~l~~~p~ 335 (347)
+..+.. |...|.+++|+|++ +|++++.|+.|++||++..... ....+...+ .|...|++++|+|+
T Consensus 138 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~ 216 (377)
T 3dwl_C 138 SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPS 216 (377)
T ss_dssp CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTT
T ss_pred eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCC
Confidence 778887 99999999999997 9999999999999999632210 012344555 89999999999999
Q ss_pred CCEEEEecCCCC
Q 043707 336 SAVVYCGSSDGL 347 (347)
Q Consensus 336 ~~~l~sgs~DG~ 347 (347)
+++|++++.||+
T Consensus 217 ~~~l~~~~~d~~ 228 (377)
T 3dwl_C 217 GNALAYAGHDSS 228 (377)
T ss_dssp SSCEEEEETTTE
T ss_pred CCEEEEEeCCCc
Confidence 999999999973
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=1.6e-27 Score=217.24 Aligned_cols=201 Identities=15% Similarity=0.167 Sum_probs=165.8
Q ss_pred cceeEeeeeccccEEEEeec--C-CEEEEecCCCcEEEEeCCC--cceee--ecCCCCeeEEEEeC-CCCEEEEEeCCCc
Q 043707 113 NGLIGSIVRKEGHIYSLAAS--G-DLLYTGSDSKNIRVWKNLK--EFSGF--KSNSGLVKAIIITG-DSNKIFTGHQDGK 184 (347)
Q Consensus 113 ~~~i~~l~~h~~~V~~l~~~--~-~~l~tg~~dg~I~vwd~~~--~~~~~--~~h~~~V~~l~~sp-~~~~l~s~~~Dg~ 184 (347)
..++..+.+|.+.|++++++ + ++|++|+.||.|+|||... ....+ .+|...|.+++|+| ++++|++++.||.
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 142 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGA 142 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCE
Confidence 34677889999999999975 5 7999999999999999663 33333 36999999999999 7789999999999
Q ss_pred EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 043707 185 IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRI 264 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl 264 (347)
|++||++......... ...|...|.+++|+|++.+|++++.|+.|++||+
T Consensus 143 i~iwd~~~~~~~~~~~------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 143 TTLRDFSGSVIQVFAK------------------------------TDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp EEEEETTSCEEEEEEC------------------------------CCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred EEEEECCCCceEEEec------------------------------cCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence 9999998532111000 0125688999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEcc-CCCEEEE
Q 043707 265 SDCKCLESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQ-ESAVVYC 341 (347)
Q Consensus 265 ~~~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p-~~~~l~s 341 (347)
+++++..+..|...|.+++|+|++ +|++++.|+.|++||++..... ..+...+ .|...|++++|+| ++.+|++
T Consensus 193 -~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~-~~~~~v~~~~~s~~~~~~l~~ 268 (383)
T 3ei3_B 193 -DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK--NSYIAEM-PHEKPVNAAYFNPTDSTKLLT 268 (383)
T ss_dssp -TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST--TCEEEEE-ECSSCEEEEEECTTTSCEEEE
T ss_pred -CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc--cceEEEe-cCCCceEEEEEcCCCCCEEEE
Confidence 578899999999999999999987 7999999999999999863321 1123333 6899999999999 9999999
Q ss_pred ecCCCC
Q 043707 342 GSSDGL 347 (347)
Q Consensus 342 gs~DG~ 347 (347)
++.||.
T Consensus 269 ~~~d~~ 274 (383)
T 3ei3_B 269 TDQRNE 274 (383)
T ss_dssp EESSSE
T ss_pred EcCCCc
Confidence 999873
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=3.4e-27 Score=213.41 Aligned_cols=221 Identities=17% Similarity=0.127 Sum_probs=174.5
Q ss_pred eeeccccEEEEee--cCCEEEEecCCCcEEEEeCCC----cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCC
Q 043707 119 IVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK----EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 119 l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
+..|++.|+++++ ++++|++|+.|+.|++||... ....+.+|...|.+++|+|++++|++++.||.|++||+++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 3458889988887 577999999999999999543 5677889999999999999999999999999999999987
Q ss_pred CCCceeee----------ecccccccceEEeccCCCeE-EEEeecc-----eeeeeecCCCeeEEEEcCCCCEEEEEeCC
Q 043707 193 KNPSVHKR----------VGSLPTFKDYVKSSVNPKNY-VEVRRNR-----NVLKIRHYDAVSCLSLNAEQGLLYSGSWD 256 (347)
Q Consensus 193 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~h~~~V~~l~~~~~~~~l~s~s~d 256 (347)
++...... +...+....++....+.... +++.... ......|...|.+++|+|++.+|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 75322211 11122333333333333332 3333332 12224578999999999999999999999
Q ss_pred CcEEEEeC------------------CCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeeh
Q 043707 257 KTLKVWRI------------------SDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLA 317 (347)
Q Consensus 257 g~i~vwdl------------------~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~ 317 (347)
|.|++||+ ..++++..+..|...|.+++|+|++ +|++++.|+.|++||++... +.
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------~~ 237 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM------AV 237 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT------EE
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc------ee
Confidence 99999995 4678999999999999999999998 99999999999999998543 45
Q ss_pred hhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 318 QVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 318 ~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
..+..|...|++++|+|++.+|++| .||
T Consensus 238 ~~~~~~~~~v~~~~~~~~~~~l~~~-~d~ 265 (372)
T 1k8k_C 238 ATLASETLPLLAVTFITESSLVAAG-HDC 265 (372)
T ss_dssp EEEECSSCCEEEEEEEETTEEEEEE-TTS
T ss_pred EEEccCCCCeEEEEEecCCCEEEEE-eCC
Confidence 6667888899999999999998888 665
No 47
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.96 E-value=2.8e-27 Score=216.87 Aligned_cols=227 Identities=20% Similarity=0.351 Sum_probs=167.4
Q ss_pred eeccccEEEEee--cCCEEEEecCCCcEEEEeCCC--cceeeecCC------------------CCeeEEEEeCCCCEEE
Q 043707 120 VRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK--EFSGFKSNS------------------GLVKAIIITGDSNKIF 177 (347)
Q Consensus 120 ~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~--~~~~~~~h~------------------~~V~~l~~sp~~~~l~ 177 (347)
..|.+.|.++++ +|++|++|+ ++.++||+... ....+..|. ..|.+++|+|++++|+
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 369999999886 578999987 68999999643 233333332 2499999999999999
Q ss_pred EEeCCCcEEEEecCCCCCceeee--------ecccccccceEEeccCCCe-EEEEeecceeeeeecCCCeeEEEEcC-CC
Q 043707 178 TGHQDGKIRIWKVSRKNPSVHKR--------VGSLPTFKDYVKSSVNPKN-YVEVRRNRNVLKIRHYDAVSCLSLNA-EQ 247 (347)
Q Consensus 178 s~~~Dg~I~vwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~h~~~V~~l~~~~-~~ 247 (347)
+|+.||+|+|||+.+++...... +...+....++....+... ++++..........+...+.+++|+| ++
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG 219 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCC
Confidence 99999999999998775432211 1122233333333333322 22223334445556888999999999 89
Q ss_pred CEEEEEeCCCcEEEEeCCCCEEEEEE-------ecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccc------e
Q 043707 248 GLLYSGSWDKTLKVWRISDCKCLESI-------NAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGT------K 313 (347)
Q Consensus 248 ~~l~s~s~dg~i~vwdl~~~~~~~~~-------~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~------~ 313 (347)
.+|++|+.|++|++||+++++.+..+ .+|...|.+++|+|++ +|++|+.|+.|++||++...... .
T Consensus 220 ~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~ 299 (393)
T 1erj_A 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS 299 (393)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------------
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCC
Confidence 99999999999999999999888777 5789999999999998 89999999999999997532210 1
Q ss_pred eeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 314 HFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 314 ~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
......+.+|...|.+++|+|++.+|++|+.||+
T Consensus 300 ~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~ 333 (393)
T 1erj_A 300 GTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 333 (393)
T ss_dssp -CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE
T ss_pred CcceEEEecccCcEEEEEECCCCCEEEEEeCCCe
Confidence 1234456789999999999999999999999983
No 48
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=6.1e-27 Score=214.05 Aligned_cols=234 Identities=15% Similarity=0.212 Sum_probs=174.1
Q ss_pred ceeEeeeeccccEEEEee---cCCEEEEecCCCcEEEEeCCCc--ceee-------------ecCCCCeeEEEEeC-CCC
Q 043707 114 GLIGSIVRKEGHIYSLAA---SGDLLYTGSDSKNIRVWKNLKE--FSGF-------------KSNSGLVKAIIITG-DSN 174 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~---~~~~l~tg~~dg~I~vwd~~~~--~~~~-------------~~h~~~V~~l~~sp-~~~ 174 (347)
.....+.+|.+.|.++++ ++++|++|+.||.|++||.... ...+ .+|...|.+++|+| +++
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 346677889999999997 4679999999999999996532 2222 25999999999999 788
Q ss_pred EEEEEeCCCcEEEEecCCCCCceeeeecc-------cccc---cceEEeccCCCeE-EEEeecce-eeeeecCCCeeEEE
Q 043707 175 KIFTGHQDGKIRIWKVSRKNPSVHKRVGS-------LPTF---KDYVKSSVNPKNY-VEVRRNRN-VLKIRHYDAVSCLS 242 (347)
Q Consensus 175 ~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~-~~~~~~~~-~~~~~h~~~V~~l~ 242 (347)
+|++++.||.|++||+.+++......... .+.. ..++....+.... +++..... .....|...|.+++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 99999999999999999876433322111 1111 1222222222222 22222222 23446899999999
Q ss_pred EcCCCC-EEEEEeCCCcEEEEeCCCCE-EEEEE---------------ecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEE
Q 043707 243 LNAEQG-LLYSGSWDKTLKVWRISDCK-CLESI---------------NAHDDAINSVVAGFDS-LVFTGSADGTVKVWR 304 (347)
Q Consensus 243 ~~~~~~-~l~s~s~dg~i~vwdl~~~~-~~~~~---------------~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd 304 (347)
|+|++. +|++++.||.|++||+++++ ++..+ ..|...|.+++|+|++ +|++++.||.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 999988 69999999999999998765 44554 5788999999999998 899999999999999
Q ss_pred cccCCcc-----------------------------------------ceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 305 RELQGKG-----------------------------------------TKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 305 ~~~~~~~-----------------------------------------~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
++..... ....+...+.+|...|++++|+|++++|++|+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp TTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC
Confidence 9864321 01123445567999999999999999999999
Q ss_pred CCCC
Q 043707 344 SDGL 347 (347)
Q Consensus 344 ~DG~ 347 (347)
.||.
T Consensus 354 ~dg~ 357 (408)
T 4a11_B 354 RDCN 357 (408)
T ss_dssp TTSC
T ss_pred CCCe
Confidence 9984
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=5.5e-27 Score=211.99 Aligned_cols=233 Identities=12% Similarity=0.039 Sum_probs=173.4
Q ss_pred eeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCCCc----ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEE
Q 043707 115 LIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNLKE----FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~~~----~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vw 188 (347)
.+..+.+|.+.|.++.++ +++|++|+.||.|++||.... ...+..|...|.+++|+|++++|++++.||.|++|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~ 123 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISIC 123 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEE
Confidence 678888999999999874 789999999999999996433 23346788999999999999999999999999999
Q ss_pred ecCCCCCceee------------eecccccccceEEeccCCCeEE-EEe------------------ecce-eeeeecCC
Q 043707 189 KVSRKNPSVHK------------RVGSLPTFKDYVKSSVNPKNYV-EVR------------------RNRN-VLKIRHYD 236 (347)
Q Consensus 189 d~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~-~~~------------------~~~~-~~~~~h~~ 236 (347)
|++.+...... .+...+....++....+....+ ++. .... .....|..
T Consensus 124 d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (372)
T 1k8k_C 124 YFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 203 (372)
T ss_dssp EEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred EecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC
Confidence 99987631111 1111222222333333332222 211 1122 22336889
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEccc--CCc----
Q 043707 237 AVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRREL--QGK---- 310 (347)
Q Consensus 237 ~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~--~~~---- 310 (347)
.|.+++|+|++.+|++++.|+.|++||+++++++..+..|...|.+++|+|++.+++++.|+.|++|+++. +.-
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~ 283 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGG 283 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECC
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEee
Confidence 99999999999999999999999999999999999999999999999999999555555999999999986 210
Q ss_pred ----------------------cceeeeh------hhh-hccCCcEEEEEEc-cCC---CEEEEecCCCC
Q 043707 311 ----------------------GTKHFLA------QVL-LKQENAITALAVN-QES---AVVYCGSSDGL 347 (347)
Q Consensus 311 ----------------------~~~~~~~------~~~-~~h~~~V~~l~~~-p~~---~~l~sgs~DG~ 347 (347)
....... ..+ .+|...|++++|. +++ .+|++|+.||+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~ 353 (372)
T 1k8k_C 284 RLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGG 353 (372)
T ss_dssp CCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSE
T ss_pred ccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCc
Confidence 0000000 223 4899999999977 566 99999999984
No 50
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=220.82 Aligned_cols=234 Identities=18% Similarity=0.218 Sum_probs=166.9
Q ss_pred cceeEee-eeccccEEEEeec---CCEEEEecCCCcEEEEeCCC---c--c--eeeecCCCCeeEEEEeCCCCEEEEEeC
Q 043707 113 NGLIGSI-VRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNLK---E--F--SGFKSNSGLVKAIIITGDSNKIFTGHQ 181 (347)
Q Consensus 113 ~~~i~~l-~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~~---~--~--~~~~~h~~~V~~l~~sp~~~~l~s~~~ 181 (347)
..++..+ .+|.+.|++++++ +++|++|+.||+|+|||... . . .....|.+.|.+++|+|++++|++|+.
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 131 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSK 131 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 4567788 8899999999864 57999999999999999533 1 1 112258999999999999999999999
Q ss_pred CCcEEEEecC---CCCCceeee------ecccc----------------cccceEEeccCCCe-EEEEeecceee-eee-
Q 043707 182 DGKIRIWKVS---RKNPSVHKR------VGSLP----------------TFKDYVKSSVNPKN-YVEVRRNRNVL-KIR- 233 (347)
Q Consensus 182 Dg~I~vwd~~---~~~~~~~~~------~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~- 233 (347)
||.|++||++ .++...... +...+ ....++....+... ++++....... ...
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 9999999995 333221111 00001 11112222222221 11222222222 223
Q ss_pred -cCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEe-cCCCcEEEEEeCC----CC-EEEEEeCCCcEEEEEcc
Q 043707 234 -HYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESIN-AHDDAINSVVAGF----DS-LVFTGSADGTVKVWRRE 306 (347)
Q Consensus 234 -h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~-~h~~~v~~i~~~~----~~-~l~s~~~dg~I~vwd~~ 306 (347)
|...|++++|+|++.+|++|+.||+|++||+++++++..+. .|...|.+++|+| ++ +|++|+.||.|++||++
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 78999999999999999999999999999999999999986 7888999997665 45 89999999999999997
Q ss_pred cCCccceee------eh------------hhhhc--cCCcEEEEEEccCCCEEEEecCCCC
Q 043707 307 LQGKGTKHF------LA------------QVLLK--QENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 307 ~~~~~~~~~------~~------------~~~~~--h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
......... .. ..+.+ |...|++++|+ ++++|++|+.||.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~ 351 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSS 351 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTE
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCe
Confidence 543210000 00 01223 77889999999 7799999999973
No 51
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2.7e-27 Score=217.36 Aligned_cols=198 Identities=14% Similarity=0.249 Sum_probs=163.4
Q ss_pred eeEeeeeccccEEEEee---cCCEEEEecCCCcEEEEeCCC---------cceeeecCCCCeeEEEEeCCC-CEEEEEeC
Q 043707 115 LIGSIVRKEGHIYSLAA---SGDLLYTGSDSKNIRVWKNLK---------EFSGFKSNSGLVKAIIITGDS-NKIFTGHQ 181 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~---~~~~l~tg~~dg~I~vwd~~~---------~~~~~~~h~~~V~~l~~sp~~-~~l~s~~~ 181 (347)
.+..+.+|.+.|+++++ ++++|++|+.||.|+|||... ....+.+|...|.+++|+|++ ++|++|+.
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 34567789999999997 467999999999999999543 366788999999999999997 69999999
Q ss_pred CCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 043707 182 DGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKV 261 (347)
Q Consensus 182 Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~v 261 (347)
||.|++||+++++....... ..|...|.+++|+|++.+|++++.||.|++
T Consensus 153 dg~i~iwd~~~~~~~~~~~~------------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 202 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGP------------------------------DVHPDTIYSVDWSRDGALICTSCRDKRVRV 202 (402)
T ss_dssp TSCEEEEETTTTEEEEEECT------------------------------TTCCSCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CCEEEEEECCCCCccEEEec------------------------------CCCCCceEEEEECCCCCEEEEEecCCcEEE
Confidence 99999999987743221100 148899999999999999999999999999
Q ss_pred EeCCCCEEEEEE-ecCCCc-EEEEEeCCCC-EEEEE---eCCCcEEEEEcccCCccceeeehhh-hhccCCcEEEEEEcc
Q 043707 262 WRISDCKCLESI-NAHDDA-INSVVAGFDS-LVFTG---SADGTVKVWRRELQGKGTKHFLAQV-LLKQENAITALAVNQ 334 (347)
Q Consensus 262 wdl~~~~~~~~~-~~h~~~-v~~i~~~~~~-~l~s~---~~dg~I~vwd~~~~~~~~~~~~~~~-~~~h~~~V~~l~~~p 334 (347)
||+++++.+..+ ..|.+. +.++.|+|++ +|++| +.|+.|++||++.... +... ...|...|.+++|+|
T Consensus 203 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~~~~s~ 277 (402)
T 2aq5_A 203 IEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE-----PLSLQELDTSSGVLLPFFDP 277 (402)
T ss_dssp EETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS-----CSEEEECCCCSSCEEEEEET
T ss_pred EeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC-----CceEEeccCCCceeEEEEcC
Confidence 999999999998 788776 8999999998 66677 6999999999986443 1111 224677899999999
Q ss_pred CCCEEEE-ecCCCC
Q 043707 335 ESAVVYC-GSSDGL 347 (347)
Q Consensus 335 ~~~~l~s-gs~DG~ 347 (347)
++++|++ |+.||.
T Consensus 278 ~~~~l~~~g~~dg~ 291 (402)
T 2aq5_A 278 DTNIVYLCGKGDSS 291 (402)
T ss_dssp TTTEEEEEETTCSC
T ss_pred CCCEEEEEEcCCCe
Confidence 9999864 556874
No 52
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=3.7e-27 Score=216.48 Aligned_cols=212 Identities=17% Similarity=0.290 Sum_probs=176.1
Q ss_pred CCCCCCCCcccccc-------------cceeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCC---CcceeeecCCC
Q 043707 99 MPPYSPNENLLSSC-------------NGLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNL---KEFSGFKSNSG 162 (347)
Q Consensus 99 ~~~~~p~~~~~~~~-------------~~~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~---~~~~~~~~h~~ 162 (347)
...|+|++..++.. ...+..+.+|.+.|.++.+++++|++|+.||.|++||.. .....+.+|.+
T Consensus 139 ~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 218 (401)
T 4aez_A 139 SVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS 218 (401)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS
T ss_pred EEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC
Confidence 33678888765443 236777889999999999999999999999999999965 34667889999
Q ss_pred CeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEE
Q 043707 163 LVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLS 242 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 242 (347)
.|.+++|+|++++|++|+.||.|++||+++++.... ...|...|.+++
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~--------------------------------~~~~~~~v~~~~ 266 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT--------------------------------KTNHNAAVKAVA 266 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE--------------------------------ECCCSSCCCEEE
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE--------------------------------ecCCcceEEEEE
Confidence 999999999999999999999999999987643221 114889999999
Q ss_pred EcCCC-CEEEEEe--CCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEE--EeCCCcEEEEEcccCCccceeee
Q 043707 243 LNAEQ-GLLYSGS--WDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFT--GSADGTVKVWRRELQGKGTKHFL 316 (347)
Q Consensus 243 ~~~~~-~~l~s~s--~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s--~~~dg~I~vwd~~~~~~~~~~~~ 316 (347)
|+|++ .++++++ .|+.|++||+++++++..+. +...|.+++|+|++ +|++ |+.||.|++||+..... ..
T Consensus 267 ~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~----~~ 341 (401)
T 4aez_A 267 WCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL----TK 341 (401)
T ss_dssp ECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE----EE
T ss_pred ECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc----ee
Confidence 99975 5666665 79999999999999999887 66789999999998 6666 44899999999975322 23
Q ss_pred hhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 317 AQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 317 ~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
...+.+|...|++++|+|++++|++++.||.
T Consensus 342 ~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~ 372 (401)
T 4aez_A 342 QVDIPAHDTRVLYSALSPDGRILSTAASDEN 372 (401)
T ss_dssp EEEEECCSSCCCEEEECTTSSEEEEECTTSE
T ss_pred EEEecCCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 3456789999999999999999999999984
No 53
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=5.3e-28 Score=221.68 Aligned_cols=219 Identities=8% Similarity=0.087 Sum_probs=145.1
Q ss_pred eEeeeeccccEEEEee----------cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCC-CEEEEEeCC
Q 043707 116 IGSIVRKEGHIYSLAA----------SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDS-NKIFTGHQD 182 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~----------~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~-~~l~s~~~D 182 (347)
+..+.+|++.|.+++| ++++|++|+.|++|+|||.. .....+..|...|.+++|+|++ .+|++|+.|
T Consensus 129 ~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 129 LGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp ECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred ecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 4457789999999997 46799999999999999953 4566777899999999999976 479999999
Q ss_pred CcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEc-CCCCEEEEEeCCCcEEE
Q 043707 183 GKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLN-AEQGLLYSGSWDKTLKV 261 (347)
Q Consensus 183 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~-~~~~~l~s~s~dg~i~v 261 (347)
|+|++||+++++................+...... ........+|...|.++.|. +++..|++++.|+++++
T Consensus 209 ~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~-------~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~v 281 (393)
T 4gq1_A 209 GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP-------LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLR 281 (393)
T ss_dssp SEEEEEETTCCC----------CSCCCSEEEESGG-------GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEE
T ss_pred CEEEEEECCCCcccccccccCCcccceEEeccccc-------ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEE
Confidence 99999999987643222111100000000000000 00011123588899999987 78999999999999999
Q ss_pred EeCCCCEEEEEEecCCCcEEEEE------------------eCC--CC-EEEEEeCCCcEEEEEcccCCccceeeehhhh
Q 043707 262 WRISDCKCLESINAHDDAINSVV------------------AGF--DS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVL 320 (347)
Q Consensus 262 wdl~~~~~~~~~~~h~~~v~~i~------------------~~~--~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~ 320 (347)
||+..++....+..|...+..+. +++ ++ ++++|+.||.|++||+..+. ....+
T Consensus 282 wd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~------~~~~~ 355 (393)
T 4gq1_A 282 WNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKD------SNSIP 355 (393)
T ss_dssp EEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTT------CCEEE
T ss_pred EECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCc------EEEEe
Confidence 99998877766665554444333 332 23 56778899999999997543 34456
Q ss_pred hccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 321 LKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 321 ~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
..|..+|++|+|+|+|++||+++.||+
T Consensus 356 ~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 356 IQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp EECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 678889999999999999999999873
No 54
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.1e-27 Score=207.64 Aligned_cols=192 Identities=21% Similarity=0.311 Sum_probs=167.4
Q ss_pred eeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeC-CCCEEEEEeCCCcEEEEecCCC
Q 043707 115 LIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITG-DSNKIFTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp-~~~~l~s~~~Dg~I~vwd~~~~ 193 (347)
.+..+.+|...|.++.+++++|++|+.||.|++||..+....+..|...|.+++|.| ++++|++++.||.|++||....
T Consensus 96 ~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 175 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKV 175 (313)
T ss_dssp C-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEE
T ss_pred cccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCce
Confidence 466778899999999999999999999999999997778888999999999999998 8999999999999999993221
Q ss_pred CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Q 043707 194 NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESI 273 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~ 273 (347)
.... ...|...|.+++|+|++. +++++.||.|++||+++++++..+
T Consensus 176 --~~~~-------------------------------~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~ 221 (313)
T 3odt_A 176 --IKTF-------------------------------SGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTY 221 (313)
T ss_dssp --EEEE-------------------------------CSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEE
T ss_pred --EEEE-------------------------------eccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhh
Confidence 1000 112888999999999987 999999999999999999999999
Q ss_pred ecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 274 NAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 274 ~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
..|...|.+++|+|++.|++++.||.|++||++... +...+..|...|++++|+|+++ +++++.||.
T Consensus 222 ~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 222 EGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGS------LKQVITLPAISIWSVDCMSNGD-IIVGSSDNL 288 (313)
T ss_dssp ECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCC------EEEEEECSSSCEEEEEECTTSC-EEEEETTSC
T ss_pred hcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCc------eeEEEeccCceEEEEEEccCCC-EEEEeCCCc
Confidence 999999999999999999999999999999998543 4666778888999999999998 556888874
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.1e-27 Score=217.32 Aligned_cols=183 Identities=14% Similarity=0.130 Sum_probs=146.2
Q ss_pred EEEeecCCEEE--EecCCCcEEEEeCCCc--ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec
Q 043707 127 YSLAASGDLLY--TGSDSKNIRVWKNLKE--FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG 202 (347)
Q Consensus 127 ~~l~~~~~~l~--tg~~dg~I~vwd~~~~--~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~ 202 (347)
.+++++|++|+ +++.|++|+|||.... ...+ .|.+.|.+++|+|+|++|++++.| .+++|+..+++......
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~-- 214 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKT-- 214 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEEC--
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeee--
Confidence 44556788765 4557999999996643 3334 477889999999999999999855 56667666654322211
Q ss_pred ccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCC----cEEEEeCCCCEE----EEEEe
Q 043707 203 SLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDK----TLKVWRISDCKC----LESIN 274 (347)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg----~i~vwdl~~~~~----~~~~~ 274 (347)
...|...|.+++|+|++.++++++.|+ ++++|++..... ...+.
T Consensus 215 ----------------------------~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~ 266 (365)
T 4h5i_A 215 ----------------------------DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT 266 (365)
T ss_dssp ----------------------------CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE
T ss_pred ----------------------------cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec
Confidence 114788899999999999999999887 688999877653 45677
Q ss_pred cCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehh-hhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 275 AHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQ-VLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 275 ~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~-~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
.|...|++++|+|++ +||+|+.|++|+|||+++.. ++. .+.+|...|++|+|+|||++||+||.|++
T Consensus 267 ~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~------~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t 335 (365)
T 4h5i_A 267 NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS------MSKIFKQAHSFAITEVTISPDSTYVASVSAANT 335 (365)
T ss_dssp SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE------EEEEETTSSSSCEEEEEECTTSCEEEEEETTSE
T ss_pred CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc------EEEEecCcccCCEEEEEECCCCCEEEEEeCCCe
Confidence 899999999999998 99999999999999998543 344 46789999999999999999999999985
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=2.3e-26 Score=204.78 Aligned_cols=192 Identities=16% Similarity=0.316 Sum_probs=161.1
Q ss_pred eeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCCc-----ceeee--cCCCCeeEEEEeCCCCEEEEEeCCCcEEEE
Q 043707 118 SIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLKE-----FSGFK--SNSGLVKAIIITGDSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 118 ~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~-----~~~~~--~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vw 188 (347)
...+|.+.|.++.+ ++++|++++ ||.|++||.... ...+. .|...|.+++|+|++++|++++.||.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 34479999999886 477999998 999999996532 23333 788999999999999999999999999999
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK 268 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~ 268 (347)
|+++++...... ...|...|.+++|+|++++|++++.||.|++||+++++
T Consensus 125 d~~~~~~~~~~~------------------------------~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 174 (337)
T 1gxr_A 125 DLAAPTPRIKAE------------------------------LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT 174 (337)
T ss_dssp ECCCC--EEEEE------------------------------EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ECCCCCcceeee------------------------------cccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 998775322111 12488899999999999999999999999999999999
Q ss_pred EEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 269 CLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 269 ~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
.+..+..|...|.+++|+|++ +|++++.||.|++||++.... ... ..+...|.+++|+|++++|++++.||.
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~------~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 175 LVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ------LQQ-HDFTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE------EEE-EECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce------Eee-ecCCCceEEEEECCCCCEEEEEcCCCc
Confidence 999999999999999999998 999999999999999985432 222 246788999999999999999998873
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.5e-27 Score=213.74 Aligned_cols=220 Identities=20% Similarity=0.269 Sum_probs=173.1
Q ss_pred ccccEEEEeec--CCEEEEecCCCcEEEEeCC-CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCcee
Q 043707 122 KEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL-KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVH 198 (347)
Q Consensus 122 h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~-~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~ 198 (347)
|.+.|++++++ +++|++|+.||.|++||.. +....+..|...|.+++|+|++++|++++.||.|++||+.+++....
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence 67789999875 7799999999999999943 45677888999999999999999999999999999999988754332
Q ss_pred eeecccc----------------------cccceEEeccCCCeE-EEEeecce-eeeeecCCCeeEEEEcCCCCEEEEEe
Q 043707 199 KRVGSLP----------------------TFKDYVKSSVNPKNY-VEVRRNRN-VLKIRHYDAVSCLSLNAEQGLLYSGS 254 (347)
Q Consensus 199 ~~~~~~~----------------------~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~s~s 254 (347)
....... ....++....+.... ++...... .....|...|.+++|+|++.+|++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSAS 266 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEc
Confidence 2211111 001122222222211 11112121 23346889999999999999999999
Q ss_pred CCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEcc
Q 043707 255 WDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQ 334 (347)
Q Consensus 255 ~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p 334 (347)
.|+.|++||+++++++..+..|...|.++.|+|++++++++.|+.|++||++... ....+..|...|++++|+|
T Consensus 267 ~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~------~~~~~~~~~~~i~~~~~s~ 340 (425)
T 1r5m_A 267 DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNT------LLALSIVDGVPIFAGRISQ 340 (425)
T ss_dssp TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTE------EEEEEECTTCCEEEEEECT
T ss_pred CCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCc------EeEecccCCccEEEEEEcC
Confidence 9999999999999999999999999999999999999999999999999997443 4556677889999999999
Q ss_pred CCCEEEEecCCCC
Q 043707 335 ESAVVYCGSSDGL 347 (347)
Q Consensus 335 ~~~~l~sgs~DG~ 347 (347)
++++|++++.||.
T Consensus 341 ~~~~l~~~~~dg~ 353 (425)
T 1r5m_A 341 DGQKYAVAFMDGQ 353 (425)
T ss_dssp TSSEEEEEETTSC
T ss_pred CCCEEEEEECCCe
Confidence 9999999999984
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=8.9e-27 Score=214.49 Aligned_cols=232 Identities=13% Similarity=0.162 Sum_probs=171.6
Q ss_pred eeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec
Q 043707 115 LIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV 190 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~ 190 (347)
.+..+.+|.+.|.+++++ +++|++|+.||.|++||.. +....+.+|...|.+++|+|++++|++++.||.|++||+
T Consensus 131 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 455557899999999974 7799999999999999965 557788899999999999999999999999999999999
Q ss_pred CCCCCceeeeec--------------------------------ccccccceEEeccCCCeE-EEEeecceeee--eecC
Q 043707 191 SRKNPSVHKRVG--------------------------------SLPTFKDYVKSSVNPKNY-VEVRRNRNVLK--IRHY 235 (347)
Q Consensus 191 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~h~ 235 (347)
++++........ ..+....++....++... +++........ ..|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 290 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT 290 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC
Confidence 987643332211 011222233333333222 22222222222 2478
Q ss_pred CCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCE-EEEEEec-CCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccc
Q 043707 236 DAVSCLSLNAEQG-LLYSGSWDKTLKVWRISDCK-CLESINA-HDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGT 312 (347)
Q Consensus 236 ~~V~~l~~~~~~~-~l~s~s~dg~i~vwdl~~~~-~~~~~~~-h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~ 312 (347)
..|.+++|+|++. +|++|+.||.|++||+++++ ++..+.. |...|.++.+.++.+|++++.|+.|++|++.......
T Consensus 291 ~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~ 370 (420)
T 3vl1_A 291 CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDPESER 370 (420)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCS
T ss_pred CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCc
Confidence 8999999999998 99999999999999999875 4777776 6778888877655599999999999999997543211
Q ss_pred ee---eehhhhhccCCcEEEEEEccCCC---EEEEecCCC
Q 043707 313 KH---FLAQVLLKQENAITALAVNQESA---VVYCGSSDG 346 (347)
Q Consensus 313 ~~---~~~~~~~~h~~~V~~l~~~p~~~---~l~sgs~DG 346 (347)
.. .....+..|...|.+++|+|++. .|++++.+|
T Consensus 371 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g 410 (420)
T 3vl1_A 371 PAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNN 410 (420)
T ss_dssp CEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTT
T ss_pred cceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCc
Confidence 10 11223557888999999999998 666666665
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=4.2e-27 Score=211.45 Aligned_cols=228 Identities=17% Similarity=0.224 Sum_probs=173.0
Q ss_pred eeccccEEEEeec-----CCEEEEecCCCcEEEEeCC--C-cceeeecCCCCeeEEEE------eCCCCEEEEEeCCCcE
Q 043707 120 VRKEGHIYSLAAS-----GDLLYTGSDSKNIRVWKNL--K-EFSGFKSNSGLVKAIII------TGDSNKIFTGHQDGKI 185 (347)
Q Consensus 120 ~~h~~~V~~l~~~-----~~~l~tg~~dg~I~vwd~~--~-~~~~~~~h~~~V~~l~~------sp~~~~l~s~~~Dg~I 185 (347)
.+|.+.|.++.++ +++|++|+.||.|++||.. + ....+.+|...|.+++| +|++++|++++.||.|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 3788999999974 4899999999999999965 3 56788899999999965 6789999999999999
Q ss_pred EEEecCCCCC-ceeeeec----------------ccccccceEEeccCCC-eEEEEeecceeeeeecCCCeeEEEEcC--
Q 043707 186 RIWKVSRKNP-SVHKRVG----------------SLPTFKDYVKSSVNPK-NYVEVRRNRNVLKIRHYDAVSCLSLNA-- 245 (347)
Q Consensus 186 ~vwd~~~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~V~~l~~~~-- 245 (347)
++||+++++. ....... ..+....++....+.. .++++..........|...|.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCC
Confidence 9999998762 2221110 0112222222222222 122223333445567899999999999
Q ss_pred -CCCEEEEEeCCCcEEEEeCCCCEEEEEEe-----cCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccc-----
Q 043707 246 -EQGLLYSGSWDKTLKVWRISDCKCLESIN-----AHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGT----- 312 (347)
Q Consensus 246 -~~~~l~s~s~dg~i~vwdl~~~~~~~~~~-----~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~----- 312 (347)
++.+|++++.||.|++||+++++++..+. .|...|.+++|+|++ +|++++.||.|++||++......
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 301 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE 301 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC
Confidence 89999999999999999998876554444 899999999999987 69999999999999998543210
Q ss_pred --------eeeehhhhhccCCcEEEEEEccCCCEEE-EecCCCC
Q 043707 313 --------KHFLAQVLLKQENAITALAVNQESAVVY-CGSSDGL 347 (347)
Q Consensus 313 --------~~~~~~~~~~h~~~V~~l~~~p~~~~l~-sgs~DG~ 347 (347)
...++..+..|...|++++|+|++++|+ +++.||.
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~ 345 (357)
T 3i2n_A 302 GIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQT 345 (357)
T ss_dssp SCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred CCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCc
Confidence 1135666788999999999999999888 7998873
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.3e-28 Score=227.99 Aligned_cols=199 Identities=11% Similarity=0.052 Sum_probs=158.4
Q ss_pred EeeeeccccEEEEeec-CCEEEEecCCCcEEEEeCCCc---ceeeecCCCCeeEE--EEeCCC-CEEEEEeCCCcEEEEe
Q 043707 117 GSIVRKEGHIYSLAAS-GDLLYTGSDSKNIRVWKNLKE---FSGFKSNSGLVKAI--IITGDS-NKIFTGHQDGKIRIWK 189 (347)
Q Consensus 117 ~~l~~h~~~V~~l~~~-~~~l~tg~~dg~I~vwd~~~~---~~~~~~h~~~V~~l--~~sp~~-~~l~s~~~Dg~I~vwd 189 (347)
..+.+|.+.|++++|+ +..|++|+.||+|++||.... ...+.+|...|.+| +|+|++ .+|+||+.|++|+|||
T Consensus 260 ~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp EEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred EEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 3677899999999985 569999999999999997632 44688999999999 567887 8999999999999999
Q ss_pred cCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecC--CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 043707 190 VSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHY--DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDC 267 (347)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~ 267 (347)
+++.+..... .+|. ..|.+++|+|++..|++++.|++|++||++++
T Consensus 340 ~~~~~~~~~~--------------------------------~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~ 387 (524)
T 2j04_B 340 PKDIATTKTT--------------------------------VSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA 387 (524)
T ss_dssp GGGHHHHCEE--------------------------------EEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT
T ss_pred CCCCCccccc--------------------------------ccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc
Confidence 9876432111 1243 35889999999999999999999999999999
Q ss_pred EEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccc----------------------------------
Q 043707 268 KCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGT---------------------------------- 312 (347)
Q Consensus 268 ~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~---------------------------------- 312 (347)
.++..+.+|.+.|++|+|+|++ +|++|+.||+|++||+.......
T Consensus 388 ~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~ 467 (524)
T 2j04_B 388 FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVY 467 (524)
T ss_dssp TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCC
T ss_pred ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceec
Confidence 9988999999999999999998 89999999999999864210000
Q ss_pred ----eeeehhhhhccCCcEEEEEEccCC---CEEEEecCCCC
Q 043707 313 ----KHFLAQVLLKQENAITALAVNQES---AVVYCGSSDGL 347 (347)
Q Consensus 313 ----~~~~~~~~~~h~~~V~~l~~~p~~---~~l~sgs~DG~ 347 (347)
.......+.+|...|.+|+|+|++ ..|++|+.||+
T Consensus 468 ~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~ 509 (524)
T 2j04_B 468 PLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGL 509 (524)
T ss_dssp C-------------CCCSCCCEEECCSTTTTTEEEEECTTSE
T ss_pred ccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCce
Confidence 012234566789999999999996 49999999984
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=3.8e-27 Score=216.99 Aligned_cols=182 Identities=18% Similarity=0.280 Sum_probs=152.6
Q ss_pred EeecCCEEEEecCCCcEEEEeCCC--cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeeccccc
Q 043707 129 LAASGDLLYTGSDSKNIRVWKNLK--EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPT 206 (347)
Q Consensus 129 l~~~~~~l~tg~~dg~I~vwd~~~--~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~ 206 (347)
+.+++++|++|+.||.|++||... ....+.+|.+.|.+++|+|++++|++|+.||.|++||+++++.....
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~------- 177 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL------- 177 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-------
T ss_pred EecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-------
Confidence 345789999999999999999653 34555789999999999999999999999999999999887543221
Q ss_pred ccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecC---CCcEEEE
Q 043707 207 FKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAH---DDAINSV 283 (347)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h---~~~v~~i 283 (347)
.+|...|.+++|+|++.+|++++.|++|++||+++++++..+..| ...|.++
T Consensus 178 -------------------------~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~ 232 (420)
T 3vl1_A 178 -------------------------IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSI 232 (420)
T ss_dssp -------------------------ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEE
T ss_pred -------------------------cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEE
Confidence 249999999999999999999999999999999999999998753 3444444
Q ss_pred ---------------------EeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCC-EEE
Q 043707 284 ---------------------VAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESA-VVY 340 (347)
Q Consensus 284 ---------------------~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~-~l~ 340 (347)
+|+|++ +|++|+.||.|++||++.... .......|...|++++|+|+++ +|+
T Consensus 233 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~l~ 307 (420)
T 3vl1_A 233 ALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ-----TIQLPSKFTCSCNSLTVDGNNANYIY 307 (420)
T ss_dssp EEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE-----EEEECCTTSSCEEEEEECSSCTTEEE
T ss_pred EEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce-----eEEcccccCCCceeEEEeCCCCCEEE
Confidence 457777 899999999999999986543 3333456888999999999998 999
Q ss_pred EecCCCC
Q 043707 341 CGSSDGL 347 (347)
Q Consensus 341 sgs~DG~ 347 (347)
+|+.||.
T Consensus 308 ~g~~dg~ 314 (420)
T 3vl1_A 308 AGYENGM 314 (420)
T ss_dssp EEETTSE
T ss_pred EEeCCCe
Confidence 9999973
No 62
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=3.4e-26 Score=219.21 Aligned_cols=236 Identities=19% Similarity=0.362 Sum_probs=183.3
Q ss_pred CCCCCCcccccc------------cceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC-CcceeeecCCCCee
Q 043707 101 PYSPNENLLSSC------------NGLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL-KEFSGFKSNSGLVK 165 (347)
Q Consensus 101 ~~~p~~~~~~~~------------~~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~-~~~~~~~~h~~~V~ 165 (347)
.|+|++..+... .+++..+.+|.+.|.++++ ++++|++++.||.|++||.. ..+..+.+|...|.
T Consensus 269 ~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~ 348 (577)
T 2ymu_A 269 AFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW 348 (577)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE
Confidence 466776654322 3456778899999998886 57799999999999999955 45677888999999
Q ss_pred EEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee--------eecccccccceEEeccCCCeEEEEeec---ceeeeeec
Q 043707 166 AIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK--------RVGSLPTFKDYVKSSVNPKNYVEVRRN---RNVLKIRH 234 (347)
Q Consensus 166 ~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~h 234 (347)
+++|+|++++|++++.||.|++||.... ..... .+...+....++....+. .+.++.. ......+|
T Consensus 349 ~~~~s~~g~~l~~~~~dg~v~~~~~~~~-~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~--~v~~~~~~~~~~~~~~~~ 425 (577)
T 2ymu_A 349 GVAFSPDGQTIASASDDKTVKLWNRNGQ-LLQTLTGHSSSVRGVAFSPDGQTIASASDDK--TVKLWNRNGQLLQTLTGH 425 (577)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTCC-EEEEEECCSSCEEEEEECTTSSCEEEEETTS--EEEEECTTCCEEEEEECC
T ss_pred EEEECCCCCEEEEEeCCCEEEEEcCCCC-EEEEecCCCCCeEEEEECCCCCEEEEEeCCC--EEEEEeCCCCEEEEecCC
Confidence 9999999999999999999999996532 21111 111112222222222222 2222221 12334579
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccce
Q 043707 235 YDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTK 313 (347)
Q Consensus 235 ~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~ 313 (347)
...|++++|+|++.+|++++.|++|++||+ +++.+..+.+|...|.+++|+|++ +|++++.|+.|++||.. ++
T Consensus 426 ~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~~--- 499 (577)
T 2ymu_A 426 SSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQ--- 499 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--SC---
T ss_pred CCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--CC---
Confidence 999999999999999999999999999996 678889999999999999999998 99999999999999964 22
Q ss_pred eeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 314 HFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 314 ~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+.+.+.+|...|++|+|+|++++|++++.||+
T Consensus 500 --~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~ 531 (577)
T 2ymu_A 500 --LLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 531 (577)
T ss_dssp --EEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred --EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE
Confidence 56677899999999999999999999999984
No 63
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.5e-27 Score=231.18 Aligned_cols=231 Identities=18% Similarity=0.156 Sum_probs=167.2
Q ss_pred eEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC----CcceeeecCCCCeeEEEEeCC--CCEEEEEeCCCcEEE
Q 043707 116 IGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL----KEFSGFKSNSGLVKAIIITGD--SNKIFTGHQDGKIRI 187 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~----~~~~~~~~h~~~V~~l~~sp~--~~~l~s~~~Dg~I~v 187 (347)
+..+.+|.+.|++++++ +++|++|+.||.|+|||.. +....+.+|.+.|.+++|+|+ +++|++|+.||.|++
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 45677888888888864 6788888889999999854 335567788888999999887 888999999999999
Q ss_pred EecCCCCCceeee----------eccccc--ccceEEeccCCCeEE-EEeec---ceeeeeecCCCeeEEEEcC------
Q 043707 188 WKVSRKNPSVHKR----------VGSLPT--FKDYVKSSVNPKNYV-EVRRN---RNVLKIRHYDAVSCLSLNA------ 245 (347)
Q Consensus 188 wd~~~~~~~~~~~----------~~~~~~--~~~~~~~~~~~~~~~-~~~~~---~~~~~~~h~~~V~~l~~~~------ 245 (347)
||+.+++...... +...+. ...++....++...+ ++... ......+|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEED 161 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC----
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccc
Confidence 9888764211111 111222 222222222222222 22222 1233457899999999999
Q ss_pred -------CCCEEEEEeCCCcEEEEeCCCC----EEEEEEecCCCcEEEEEeCCC---C-EEEEEeCCCcEEEEEcccCCc
Q 043707 246 -------EQGLLYSGSWDKTLKVWRISDC----KCLESINAHDDAINSVVAGFD---S-LVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 246 -------~~~~l~s~s~dg~i~vwdl~~~----~~~~~~~~h~~~v~~i~~~~~---~-~l~s~~~dg~I~vwd~~~~~~ 310 (347)
++.+|++|+.||+|++||++++ .++..+.+|...|.+++|+|+ + +|++++.||.|++||++....
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence 5899999999999999999877 677888999999999999999 6 899999999999999986432
Q ss_pred cceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 311 GTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 311 ~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
. ..........|...|++++|+|++++|++|+.||.
T Consensus 242 ~-~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~ 277 (753)
T 3jro_A 242 P-WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNK 277 (753)
T ss_dssp C-CBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSC
T ss_pred c-ceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCE
Confidence 1 11123344568889999999999999999999984
No 64
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=3.1e-26 Score=212.36 Aligned_cols=232 Identities=18% Similarity=0.244 Sum_probs=174.6
Q ss_pred eEeeeeccccEEEEeec---CCEEEEecCCCcEEEEeCC------------CcceeeecCCCCeeEEEEeCCCC-EEEEE
Q 043707 116 IGSIVRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNL------------KEFSGFKSNSGLVKAIIITGDSN-KIFTG 179 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~------------~~~~~~~~h~~~V~~l~~sp~~~-~l~s~ 179 (347)
+.....|.+.|.++++. +++|++|+.||.|++|+.. +....+.+|...|.+++|+|++. +|++|
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 35566899999999875 4589999999999999954 34567788999999999999888 99999
Q ss_pred eCCCcEEEEecCCCCCce---------------eeeecccccccceEEeccCCCeE--EEEeec----ceeeeeecCCCe
Q 043707 180 HQDGKIRIWKVSRKNPSV---------------HKRVGSLPTFKDYVKSSVNPKNY--VEVRRN----RNVLKIRHYDAV 238 (347)
Q Consensus 180 ~~Dg~I~vwd~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~h~~~V 238 (347)
+.||.|++||+....... ...+...+....++........+ +++... .......|...|
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v 280 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEV 280 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCE
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCe
Confidence 999999999998743210 00111122222333333222222 222222 112334789999
Q ss_pred eEEEEcCCCC-EEEEEeCCCcEEEEeCCC-CEEEEEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccc--
Q 043707 239 SCLSLNAEQG-LLYSGSWDKTLKVWRISD-CKCLESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGT-- 312 (347)
Q Consensus 239 ~~l~~~~~~~-~l~s~s~dg~i~vwdl~~-~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~-- 312 (347)
++++|+|++. +|++|+.||+|++||+++ .+++..+..|...|.++.|+|++ +|++++.|+.|+|||+...+...
T Consensus 281 ~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 281 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 9999999876 799999999999999998 56789999999999999999987 79999999999999998633210
Q ss_pred ------eeeehhhhhccCCcEEEEEEccCCC-EEEEecCCCC
Q 043707 313 ------KHFLAQVLLKQENAITALAVNQESA-VVYCGSSDGL 347 (347)
Q Consensus 313 ------~~~~~~~~~~h~~~V~~l~~~p~~~-~l~sgs~DG~ 347 (347)
...++..+.+|...|++++|+|++. +|++++.||.
T Consensus 361 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~ 402 (430)
T 2xyi_A 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNI 402 (430)
T ss_dssp HHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSE
T ss_pred cccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCC
Confidence 0124556678889999999999998 9999999873
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.5e-26 Score=199.90 Aligned_cols=225 Identities=14% Similarity=0.151 Sum_probs=174.6
Q ss_pred cceeEeeeeccccEEEEee-cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 113 NGLIGSIVRKEGHIYSLAA-SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 113 ~~~i~~l~~h~~~V~~l~~-~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
..++..+.+|.+.|.++.+ ++++|++|+.||.|++||.. +....+..|...|.+++|+|++++|++++.||.|++|+
T Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp CEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 3568899999999999986 68899999999999999954 34667788999999999999999999999999999999
Q ss_pred cCCCCCcee-eeecccc-------cccceEEeccCCCeEEEEeec--ceeeeeecCCCeeEEEEcC-CCCEEEEEeCCCc
Q 043707 190 VSRKNPSVH-KRVGSLP-------TFKDYVKSSVNPKNYVEVRRN--RNVLKIRHYDAVSCLSLNA-EQGLLYSGSWDKT 258 (347)
Q Consensus 190 ~~~~~~~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~dg~ 258 (347)
+........ ....... ....++........ +.++.. .......|...|.+++|.+ ++.+|++++.||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~-i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 166 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKT-AKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKT 166 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSE-EEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSC
T ss_pred eeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCC-EEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCCC
Confidence 976532111 1111000 01112222222222 222222 2233446899999999998 8999999999999
Q ss_pred EEEEeCCCCEEEEEEec-CCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCC
Q 043707 259 LKVWRISDCKCLESINA-HDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESA 337 (347)
Q Consensus 259 i~vwdl~~~~~~~~~~~-h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~ 337 (347)
|++|| ..+.+..+.. |...|.+++|+|++.+++++.||.|++||++... +...+..|...|++++|+|++
T Consensus 167 i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 167 IKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGD------VLRTYEGHESFVYCIKLLPNG- 237 (313)
T ss_dssp EEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCC------EEEEEECCSSCEEEEEECTTS-
T ss_pred EEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchh------hhhhhhcCCceEEEEEEecCC-
Confidence 99999 5677778877 8999999999999999999999999999998543 456677899999999999999
Q ss_pred EEEEecCCCC
Q 043707 338 VVYCGSSDGL 347 (347)
Q Consensus 338 ~l~sgs~DG~ 347 (347)
.|++++.||.
T Consensus 238 ~l~~~~~dg~ 247 (313)
T 3odt_A 238 DIVSCGEDRT 247 (313)
T ss_dssp CEEEEETTSE
T ss_pred CEEEEecCCE
Confidence 5888988873
No 66
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.95 E-value=1.5e-26 Score=227.10 Aligned_cols=196 Identities=22% Similarity=0.397 Sum_probs=163.9
Q ss_pred eeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCC--cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec
Q 043707 115 LIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK--EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV 190 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~--~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~ 190 (347)
....+.+|.+.|.++.+ ++++|++|+.||+|+|||... ....+.+|...|.+++|+|++++|++|+.|++|++||+
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 35678899999999886 578999999999999999653 46778899999999999999999999999999999998
Q ss_pred CCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCC--CEEEEEeCCCcEEEEeCCCCE
Q 043707 191 SRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ--GLLYSGSWDKTLKVWRISDCK 268 (347)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~--~~l~s~s~dg~i~vwdl~~~~ 268 (347)
.......... . ..+|...|.|++|+|++ ..|++++.|++|++||+++++
T Consensus 502 ~~~~~~~~~~--~---------------------------~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 502 LGECKYTISE--G---------------------------GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK 552 (694)
T ss_dssp TSCEEEEECS--S---------------------------TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC
T ss_pred CCCcceeecc--C---------------------------CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc
Confidence 6432110000 0 01488899999999986 689999999999999999999
Q ss_pred EEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 269 CLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 269 ~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
++..+.+|...|.+++|+|++ +|++|+.||.|++||++... .+..+ .+...|.+++|+|++.+|++++.++
T Consensus 553 ~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~------~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 553 LRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGK------KLYSL-EANSVIHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTE------EEECC-BCSSCEEEEEECSSSSEEEEEETTE
T ss_pred EEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc------eEEEe-cCCCcEEEEEEcCCCcEEEEEcCCC
Confidence 999999999999999999998 99999999999999998543 22333 2456899999999999998887553
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=3.9e-26 Score=208.47 Aligned_cols=226 Identities=12% Similarity=0.089 Sum_probs=172.2
Q ss_pred eeEeeeeccccEEEEee--c----C---CEEEEecCCCcEEEEeCC--Cc-----ceeeecC-----CCCeeEEEEe---
Q 043707 115 LIGSIVRKEGHIYSLAA--S----G---DLLYTGSDSKNIRVWKNL--KE-----FSGFKSN-----SGLVKAIIIT--- 170 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~--~----~---~~l~tg~~dg~I~vwd~~--~~-----~~~~~~h-----~~~V~~l~~s--- 170 (347)
++..+.+|...|.++.+ + + ++|++|+.||.|++|+.. +. ...+..| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 57788899999999886 4 7 899999999999999843 33 6677778 5899999999
Q ss_pred -CCCCE-EEEEeCCCcEEEEecCC------CCCce-----eee---------------ecccccccceEEeccCCCeEE-
Q 043707 171 -GDSNK-IFTGHQDGKIRIWKVSR------KNPSV-----HKR---------------VGSLPTFKDYVKSSVNPKNYV- 221 (347)
Q Consensus 171 -p~~~~-l~s~~~Dg~I~vwd~~~------~~~~~-----~~~---------------~~~~~~~~~~~~~~~~~~~~~- 221 (347)
|++++ |++++.||.|++||++. ++... ... +...+.. .++....+....+
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999998 44332 111 1111222 2222222222111
Q ss_pred EEeecceee-eee---c---CCCeeEEEEcCCCCEEEEEeCC---CcEEEEeCCCCEEEEEEec-------------CCC
Q 043707 222 EVRRNRNVL-KIR---H---YDAVSCLSLNAEQGLLYSGSWD---KTLKVWRISDCKCLESINA-------------HDD 278 (347)
Q Consensus 222 ~~~~~~~~~-~~~---h---~~~V~~l~~~~~~~~l~s~s~d---g~i~vwdl~~~~~~~~~~~-------------h~~ 278 (347)
++....... ... | ...|.+++|+|++.+|++++.| +.|++||+++++++..+.. |..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 222222222 234 7 8999999999999999999999 9999999999999999998 999
Q ss_pred cEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhh------cc---------------CCcEEEEEEccCC
Q 043707 279 AINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLL------KQ---------------ENAITALAVNQES 336 (347)
Q Consensus 279 ~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~------~h---------------~~~V~~l~~~p~~ 336 (347)
.|.+++|+|++ +|++++.||.|++||++... +...+. .| ...|++++|+|++
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE------RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTE------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc------eeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 99999999987 99999999999999997543 333444 55 8999999999998
Q ss_pred ----------CEEEEecCCCC
Q 043707 337 ----------AVVYCGSSDGL 347 (347)
Q Consensus 337 ----------~~l~sgs~DG~ 347 (347)
++|++|+.||.
T Consensus 367 ~~~~~~~~~~~~l~s~~~dg~ 387 (397)
T 1sq9_A 367 WRSGMGADLNESLCCVCLDRS 387 (397)
T ss_dssp TSBSTTCTTSCEEEEEETTTE
T ss_pred ccccccccccceEEEecCCCc
Confidence 79999999983
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.1e-26 Score=208.35 Aligned_cols=215 Identities=15% Similarity=0.171 Sum_probs=164.5
Q ss_pred CCCCCCCcccccc------------cceeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCCC--ccee-------
Q 043707 100 PPYSPNENLLSSC------------NGLIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNLK--EFSG------- 156 (347)
Q Consensus 100 ~~~~p~~~~~~~~------------~~~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~~--~~~~------- 156 (347)
..|+|++..++.. ...+..+..|.+.|.++.++ +++|++++.||.|++||... ....
T Consensus 114 ~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 114 LAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence 3577777665432 23667788899999999874 77999999999999998532 1222
Q ss_pred -------------------------------------------------eecCCCCeeEEEEeCCCCEEEEEeCCCcEEE
Q 043707 157 -------------------------------------------------FKSNSGLVKAIIITGDSNKIFTGHQDGKIRI 187 (347)
Q Consensus 157 -------------------------------------------------~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~v 187 (347)
+..|...|.+++|+|++++|++++.||.|++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i 273 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRI 273 (425)
T ss_dssp ------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 2345556666666666666666666666666
Q ss_pred EecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 043707 188 WKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDC 267 (347)
Q Consensus 188 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~ 267 (347)
||+++++... ....|...|.+++|+|++ +|++++.|+.|++||++++
T Consensus 274 ~d~~~~~~~~--------------------------------~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 274 WHGGNGNSQN--------------------------------CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp ECSSSBSCSE--------------------------------EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT
T ss_pred EECCCCccce--------------------------------EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC
Confidence 6665543221 122488999999999999 9999999999999999999
Q ss_pred EEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCcc--------------ceeeehhhhhccCC--cEEEE
Q 043707 268 KCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKG--------------TKHFLAQVLLKQEN--AITAL 330 (347)
Q Consensus 268 ~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~--------------~~~~~~~~~~~h~~--~V~~l 330 (347)
+++..+..|...|.+++|+|++ +|++++.||.|++||++..... ....+...+..|.. .|+++
T Consensus 321 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 400 (425)
T 1r5m_A 321 TLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDL 400 (425)
T ss_dssp EEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEE
T ss_pred cEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEE
Confidence 9999999999999999999997 9999999999999999854310 00114566777866 99999
Q ss_pred EEccCCCEEEEecCCCC
Q 043707 331 AVNQESAVVYCGSSDGL 347 (347)
Q Consensus 331 ~~~p~~~~l~sgs~DG~ 347 (347)
+|+|++++|++++.||.
T Consensus 401 ~~s~~~~~l~~~~~dg~ 417 (425)
T 1r5m_A 401 SWNCAGNKISVAYSLQE 417 (425)
T ss_dssp EECTTSSEEEEEESSSC
T ss_pred EccCCCceEEEEecCce
Confidence 99999999999999984
No 69
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=3.2e-26 Score=211.57 Aligned_cols=214 Identities=16% Similarity=0.273 Sum_probs=176.2
Q ss_pred CCCCCCCCcccccc-------------cceeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCC---CcceeeecCCC
Q 043707 99 MPPYSPNENLLSSC-------------NGLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNL---KEFSGFKSNSG 162 (347)
Q Consensus 99 ~~~~~p~~~~~~~~-------------~~~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~---~~~~~~~~h~~ 162 (347)
...|+|+|..++.. ...+..+.+|...|.++.+++.+|++|+.|+.+++||.. .....+.+|..
T Consensus 152 sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~ 231 (420)
T 4gga_A 152 SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ 231 (420)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS
T ss_pred EEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccccc
Confidence 34689999877543 246788889999999999999999999999999999954 33567889999
Q ss_pred CeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEE
Q 043707 163 LVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLS 242 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 242 (347)
.+..+.|+|+++++++++.|+.|++|+...++...... .....|...|.+++
T Consensus 232 ~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~----------------------------~~~~~~~~~V~~~~ 283 (420)
T 4gga_A 232 EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPL----------------------------QTFTQHQGAVKAVA 283 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCS----------------------------EEECCCSSCEEEEE
T ss_pred ceeeeeecCCCCeeeeeeccccceEEeeccccccceee----------------------------eeecccCCceeeee
Confidence 99999999999999999999999999998775321110 01124889999999
Q ss_pred EcCC-CCEEEEE--eCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEE--eCCCcEEEEEcccCCccceeee
Q 043707 243 LNAE-QGLLYSG--SWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTG--SADGTVKVWRRELQGKGTKHFL 316 (347)
Q Consensus 243 ~~~~-~~~l~s~--s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~--~~dg~I~vwd~~~~~~~~~~~~ 316 (347)
|+|. ..+++++ +.|++|++||+++++++..+..|. .+.++.|++++ .++++ +.|+.|+|||+.... +
T Consensus 284 ~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~------~ 356 (420)
T 4gga_A 284 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS-QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA------K 356 (420)
T ss_dssp ECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS-CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC------E
T ss_pred eCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc-ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc------E
Confidence 9996 4566554 579999999999999999998664 57888888886 55544 379999999998543 5
Q ss_pred hhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 317 AQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 317 ~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+..+.+|...|++|+|+|+|++|++|+.||+
T Consensus 357 v~~l~gH~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 357 VAELKGHTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 6778899999999999999999999999984
No 70
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.95 E-value=3.4e-26 Score=206.02 Aligned_cols=222 Identities=14% Similarity=0.241 Sum_probs=166.5
Q ss_pred ccccEEEEeec------CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeC-CCCEEEEEeCCCcEEEEecCC
Q 043707 122 KEGHIYSLAAS------GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITG-DSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 122 h~~~V~~l~~~------~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp-~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
|.+.|++++++ +.+|++|+.||.|++||.. +....+.+|...|.+++|+| ++++|++|+.||.|++||+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 45679888864 4499999999999999954 55677889999999999999 899999999999999999987
Q ss_pred CCCceeee-----------ecccccccceEEeccCCCeEE-EEeeccee-----------------------------ee
Q 043707 193 KNPSVHKR-----------VGSLPTFKDYVKSSVNPKNYV-EVRRNRNV-----------------------------LK 231 (347)
Q Consensus 193 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----------------------------~~ 231 (347)
++...... +...+....++....+....+ +....... ..
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 75433221 111122222233333222222 11111110 11
Q ss_pred eecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC--------------EEEEEEecCCCcEEEEEeCCC--C-EEEEE
Q 043707 232 IRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDC--------------KCLESINAHDDAINSVVAGFD--S-LVFTG 294 (347)
Q Consensus 232 ~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~--------------~~~~~~~~h~~~v~~i~~~~~--~-~l~s~ 294 (347)
..|...|.+++|+ +.+|++++.|+.|++||++++ ..+..+..|...|.+++|+|+ + +|++|
T Consensus 228 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~ 305 (366)
T 3k26_A 228 DIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALG 305 (366)
T ss_dssp SSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEE
T ss_pred cCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEE
Confidence 1288999999999 679999999999999999876 348888999999999999998 6 99999
Q ss_pred eCCCcEEEEEcccCCccceeeehhhhhcc--CCcEEEEEEccCCCEEEEecCCCC
Q 043707 295 SADGTVKVWRRELQGKGTKHFLAQVLLKQ--ENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 295 ~~dg~I~vwd~~~~~~~~~~~~~~~~~~h--~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+.||.|++||++.... .......+..| ...|++++|+|++++|++|+.||.
T Consensus 306 ~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 358 (366)
T 3k26_A 306 NQVGKLYVWDLEVEDP--HKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDAS 358 (366)
T ss_dssp CTTSCEEEEECCSSSG--GGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred ecCCcEEEEECCCCCC--ccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCE
Confidence 9999999999986542 11122355566 789999999999999999999984
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=9.8e-26 Score=210.54 Aligned_cols=222 Identities=22% Similarity=0.334 Sum_probs=173.4
Q ss_pred eeEeeeecccc-EEEEeecCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecC
Q 043707 115 LIGSIVRKEGH-IYSLAASGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 115 ~i~~l~~h~~~-V~~l~~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~ 191 (347)
....+.+|.+. +.++.+++++|++|+.||+|++||.. +....+.+|.+.|.+++|+|++ +|++|+.||+|++||++
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~ 191 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIK 191 (464)
T ss_dssp EEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETT
T ss_pred ceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECC
Confidence 45688899887 58899999999999999999999954 4567788999999999999988 99999999999999998
Q ss_pred CCCCceeeeec--------cc--ccccceEEeccCCCeEE-EEeecc------------------------eeeeeecCC
Q 043707 192 RKNPSVHKRVG--------SL--PTFKDYVKSSVNPKNYV-EVRRNR------------------------NVLKIRHYD 236 (347)
Q Consensus 192 ~~~~~~~~~~~--------~~--~~~~~~~~~~~~~~~~~-~~~~~~------------------------~~~~~~h~~ 236 (347)
+++........ .. +....++....+....+ ++.... .....+|..
T Consensus 192 ~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (464)
T 3v7d_B 192 KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 271 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS
T ss_pred CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc
Confidence 87543222110 01 11122233333322222 222111 123446777
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceee
Q 043707 237 AVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHF 315 (347)
Q Consensus 237 ~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~ 315 (347)
.|.++ ++++.+|++++.||.|++||+++++++..+.+|...|.+++|+|++ +|++|+.||.|++||++.+.
T Consensus 272 ~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~------ 343 (464)
T 3v7d_B 272 SVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE------ 343 (464)
T ss_dssp CEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE------
T ss_pred eEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc------
Confidence 77776 5678999999999999999999999999999999999999999987 99999999999999997543
Q ss_pred ehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 316 LAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 316 ~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+...+.+|...|.+++|+ +.+|++|+.||+
T Consensus 344 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~ 373 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLS--DKFLVSAAADGS 373 (464)
T ss_dssp EEEEECCCSSCEEEEEEC--SSEEEEEETTSE
T ss_pred EEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc
Confidence 566778899999999997 589999999984
No 72
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.7e-26 Score=212.16 Aligned_cols=198 Identities=15% Similarity=0.236 Sum_probs=166.1
Q ss_pred eccccEEEEee--cCCEEEEecCCCcEEEEeCCC------cceeeecCCCCeeEEEEeCC-CCEEEEEeCCCcEEEEecC
Q 043707 121 RKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK------EFSGFKSNSGLVKAIIITGD-SNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 121 ~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~------~~~~~~~h~~~V~~l~~sp~-~~~l~s~~~Dg~I~vwd~~ 191 (347)
.|...|.++++ ++++|++|+.||.|++|+... ....+.+|...|.+++|+|+ +++|++++.||.|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 57888999887 577999999999999999654 56678889999999999998 8999999999999999998
Q ss_pred CCCCceee-eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCEE
Q 043707 192 RKNPSVHK-RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE-QGLLYSGSWDKTLKVWRISDCKC 269 (347)
Q Consensus 192 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~l~s~s~dg~i~vwdl~~~~~ 269 (347)
+.+..... ..... .....|...|.+++|+|+ +.+|++++.||.|++||++++++
T Consensus 145 ~~~~~~~~~~~~~~------------------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~ 200 (416)
T 2pm9_A 145 KCTESPSNYTPLTP------------------------GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE 200 (416)
T ss_dssp TTSSCTTTCCCBCC------------------------CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE
T ss_pred CCcccccccccccc------------------------ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc
Confidence 87521100 00000 001248899999999998 78999999999999999999999
Q ss_pred EEEEecC------CCcEEEEEeCCCC--EEEEEeCCC---cEEEEEcccCCccceeeehhhhh-ccCCcEEEEEEcc-CC
Q 043707 270 LESINAH------DDAINSVVAGFDS--LVFTGSADG---TVKVWRRELQGKGTKHFLAQVLL-KQENAITALAVNQ-ES 336 (347)
Q Consensus 270 ~~~~~~h------~~~v~~i~~~~~~--~l~s~~~dg---~I~vwd~~~~~~~~~~~~~~~~~-~h~~~V~~l~~~p-~~ 336 (347)
+..+..| ...|.+++|+|++ +|++++.|+ .|++||++.... +...+. +|...|++++|+| ++
T Consensus 201 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~ 275 (416)
T 2pm9_A 201 VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-----PLQTLNQGHQKGILSLDWCHQDE 275 (416)
T ss_dssp EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-----CSBCCCSCCSSCEEEEEECSSCS
T ss_pred ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-----CcEEeecCccCceeEEEeCCCCC
Confidence 9999877 7889999999986 899999999 999999986533 456666 8999999999999 89
Q ss_pred CEEEEecCCCC
Q 043707 337 AVVYCGSSDGL 347 (347)
Q Consensus 337 ~~l~sgs~DG~ 347 (347)
++|++++.||+
T Consensus 276 ~~l~s~~~dg~ 286 (416)
T 2pm9_A 276 HLLLSSGRDNT 286 (416)
T ss_dssp SCEEEEESSSE
T ss_pred CeEEEEeCCCC
Confidence 99999999973
No 73
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=2.9e-26 Score=212.62 Aligned_cols=218 Identities=15% Similarity=0.237 Sum_probs=160.3
Q ss_pred eccccEEEEee--cCCEEEEecCCCcEEEEeCCC-------------cceeeecCC------------CCeeEEEEeCCC
Q 043707 121 RKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK-------------EFSGFKSNS------------GLVKAIIITGDS 173 (347)
Q Consensus 121 ~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~-------------~~~~~~~h~------------~~V~~l~~sp~~ 173 (347)
.|.+.|+++++ ++++|++|+.||.|+||+... ....+.+|. +.|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 46778888886 477999999999999998542 255778898 889999999987
Q ss_pred --CEEEEEeCCCcEEEEecCCCCCce------------------------------------------------eeeecc
Q 043707 174 --NKIFTGHQDGKIRIWKVSRKNPSV------------------------------------------------HKRVGS 203 (347)
Q Consensus 174 --~~l~s~~~Dg~I~vwd~~~~~~~~------------------------------------------------~~~~~~ 203 (347)
.+|++++.||+|++||+..+.... ...+..
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 789999999999999987632110 001111
Q ss_pred cccccceEEeccCCCeEEEEeecc---ee-e--------eeecCCCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCEE-
Q 043707 204 LPTFKDYVKSSVNPKNYVEVRRNR---NV-L--------KIRHYDAVSCLSLNAEQ-GLLYSGSWDKTLKVWRISDCKC- 269 (347)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~---~~-~--------~~~h~~~V~~l~~~~~~-~~l~s~s~dg~i~vwdl~~~~~- 269 (347)
.+.. .++.... ...+.++.-. .. . ..+|...|.+++|+|++ .+|++|+.||+|++||+++++.
T Consensus 186 ~~~~-~~l~s~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 186 NSDY-ETYLSAD--DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp CTTS-SEEEEEC--SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred cCCC-CEEEEeC--CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 1222 2233332 2333333222 11 1 23689999999999998 9999999999999999999887
Q ss_pred ---EEEEecCCC------------cEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCc-------
Q 043707 270 ---LESINAHDD------------AINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENA------- 326 (347)
Q Consensus 270 ---~~~~~~h~~------------~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~------- 326 (347)
+..+..|.. .|.+++|+|++ +|++++. +.|++||++..++ +...+..|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~-----~~~~~~~~~~~~~~l~~~ 336 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENR-----PVETYQVHEYLRSKLCSL 336 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSS-----CSCCEESCGGGTTTHHHH
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcc-----ccceeecccccccccccc
Confidence 788888876 89999999998 8888888 9999999985333 45555555421
Q ss_pred --------EEEEEEccCCCEEEEecCCCC
Q 043707 327 --------ITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 327 --------V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+..++|+|++++|++|+.||.
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~ 365 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNF 365 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTE
T ss_pred ccccccccceEEEECCCCCEEEEeccCCE
Confidence 345999999999999999984
No 74
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=1.7e-25 Score=199.21 Aligned_cols=192 Identities=16% Similarity=0.284 Sum_probs=164.7
Q ss_pred eeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec
Q 043707 115 LIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV 190 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~ 190 (347)
....+..|...|.++.+ ++++|++++.||.|++||.. +....+..|...|.+++|+|++++|++++.||.|++||+
T Consensus 133 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 212 (337)
T 1gxr_A 133 IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212 (337)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEEC
Confidence 45567778888998886 57799999999999999965 446677889999999999999999999999999999999
Q ss_pred CCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEE
Q 043707 191 SRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCL 270 (347)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~ 270 (347)
++++.... ..+...+.+++|+|++.+|++++.|+.|++||+++++..
T Consensus 213 ~~~~~~~~---------------------------------~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 213 REGRQLQQ---------------------------------HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp TTTEEEEE---------------------------------EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred CCCceEee---------------------------------ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE
Confidence 87642211 137788999999999999999999999999999988754
Q ss_pred EEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 271 ESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 271 ~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
.+..|...|.+++|+|++ +|++++.||.|++||++.... . ....|...|++++|+|++++|++++.||.
T Consensus 260 -~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~------~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 260 -QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS------I-FQSKESSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp -EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE------E-EEEECSSCEEEEEECTTSCEEEEEETTSC
T ss_pred -EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeE------E-EEecCCCcEEEEEECCCCCEEEEecCCCe
Confidence 677899999999999987 899999999999999985542 1 23457889999999999999999999984
No 75
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=9.4e-26 Score=201.68 Aligned_cols=221 Identities=15% Similarity=0.148 Sum_probs=172.0
Q ss_pred eEeeeeccccEEEEee--cCC-EEEEecCCCcEEEEeC-CC-cceeeec--CCCCeeEEEEeCCCCEEEEEeCCCcEEEE
Q 043707 116 IGSIVRKEGHIYSLAA--SGD-LLYTGSDSKNIRVWKN-LK-EFSGFKS--NSGLVKAIIITGDSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~--~~~-~l~tg~~dg~I~vwd~-~~-~~~~~~~--h~~~V~~l~~sp~~~~l~s~~~Dg~I~vw 188 (347)
+..+..|...|.++.+ +++ +|++|+.||.|++||. .. ....+.. |...|.+++|+| +++|++++.||.|++|
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iw 127 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVI 127 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEE
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEE
Confidence 5566689999999886 588 9999999999999997 53 4566778 999999999999 9999999999999999
Q ss_pred ecCC---------CCCceeee-------ecccccccceEEeccCCCeEE-EEee-cc---eeeeeecCCCeeEEEEcC-C
Q 043707 189 KVSR---------KNPSVHKR-------VGSLPTFKDYVKSSVNPKNYV-EVRR-NR---NVLKIRHYDAVSCLSLNA-E 246 (347)
Q Consensus 189 d~~~---------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~-~~---~~~~~~h~~~V~~l~~~~-~ 246 (347)
|+++ .+...... +...+.. ++....+....+ ++.. .. ......|...|.+++|+| +
T Consensus 128 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 128 DPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE 205 (342)
T ss_dssp CHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG
T ss_pred cccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC
Confidence 9986 44322111 1111111 222222222222 2222 11 123445788999999999 9
Q ss_pred CCEEEEEeCCCcEEEEeCCCC------EEEEEEecCCC---------cEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCc
Q 043707 247 QGLLYSGSWDKTLKVWRISDC------KCLESINAHDD---------AINSVVAGFDS-LVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 247 ~~~l~s~s~dg~i~vwdl~~~------~~~~~~~~h~~---------~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~ 310 (347)
+.+|++++.||.|++|+++.. +.+..++.|.. .|.+++|+|++ +|++++.||.|++||++...
T Consensus 206 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~- 284 (342)
T 1yfq_A 206 QEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK- 284 (342)
T ss_dssp GCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE-
T ss_pred CCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh-
Confidence 999999999999999999887 77888888865 99999999987 89999999999999997543
Q ss_pred cceeeehhhhhcc-CCcEEEEEEccCCCEEEEecCCCC
Q 043707 311 GTKHFLAQVLLKQ-ENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 311 ~~~~~~~~~~~~h-~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+...+..| ...|++++ |++++|++|+.||+
T Consensus 285 -----~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 285 -----KIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp -----EEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred -----HhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 45667787 99999999 99999999999984
No 76
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-26 Score=212.80 Aligned_cols=201 Identities=15% Similarity=0.237 Sum_probs=167.1
Q ss_pred eeEeeeeccccEEEEeec---CCEEEEecCCCcEEEEeCCCcc-----------eeeecCCCCeeEEEEeCC-CCEEEEE
Q 043707 115 LIGSIVRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNLKEF-----------SGFKSNSGLVKAIIITGD-SNKIFTG 179 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~~~~-----------~~~~~h~~~V~~l~~sp~-~~~l~s~ 179 (347)
.+..+.+|.+.|.++.++ +++|++|+.||.|++||..... ..+..|...|.+++|+|+ +.+|+++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 677788899999999875 6799999999999999965432 223578999999999998 7899999
Q ss_pred eCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCC-CEEEEEeCCC-
Q 043707 180 HQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ-GLLYSGSWDK- 257 (347)
Q Consensus 180 ~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~s~s~dg- 257 (347)
+.||.|++||+++++.......... ..+|...|.+++|+|++ .+|++++.|+
T Consensus 185 ~~dg~v~iwd~~~~~~~~~~~~~~~--------------------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~ 238 (416)
T 2pm9_A 185 GSSNFASIWDLKAKKEVIHLSYTSP--------------------------NSGIKQQLSVVEWHPKNSTRVATATGSDN 238 (416)
T ss_dssp SSSSCEEEEETTTTEEEEEECCCCC--------------------------SSCCCCCEEEEEECSSCTTEEEEEECCSS
T ss_pred cCCCCEEEEECCCCCcceEEecccc--------------------------ccccCCceEEEEECCCCCCEEEEEECCCC
Confidence 9999999999988653322211100 01247889999999986 6999999998
Q ss_pred --cEEEEeCCCC-EEEEEEe-cCCCcEEEEEeCC-CC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEE
Q 043707 258 --TLKVWRISDC-KCLESIN-AHDDAINSVVAGF-DS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALA 331 (347)
Q Consensus 258 --~i~vwdl~~~-~~~~~~~-~h~~~v~~i~~~~-~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 331 (347)
.|++||++++ +++..+. +|...|.+++|+| ++ +|++++.||.|++||++... +...+..|...|++++
T Consensus 239 ~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~------~~~~~~~~~~~v~~~~ 312 (416)
T 2pm9_A 239 DPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE------QLSQFPARGNWCFKTK 312 (416)
T ss_dssp SCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC------EEEEEECSSSCCCCEE
T ss_pred CceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc------cceeecCCCCceEEEE
Confidence 9999999986 6778888 8999999999999 65 99999999999999998543 4666778999999999
Q ss_pred EccCC-CEEEEecCCCC
Q 043707 332 VNQES-AVVYCGSSDGL 347 (347)
Q Consensus 332 ~~p~~-~~l~sgs~DG~ 347 (347)
|+|++ .+|++++.||.
T Consensus 313 ~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 313 FAPEAPDLFACASFDNK 329 (416)
T ss_dssp ECTTCTTEEEECCSSSE
T ss_pred ECCCCCCEEEEEecCCc
Confidence 99999 89999999973
No 77
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=3.5e-25 Score=205.44 Aligned_cols=191 Identities=23% Similarity=0.426 Sum_probs=150.6
Q ss_pred eeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCC
Q 043707 115 LIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
.+..+.+|.+.|.++.+++++|++|+.||.|++||.. +....+.+|...|.+++|+++ .|++|+.||.|++||+++
T Consensus 165 ~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT--EEEEEETTSCEEEEECSS
T ss_pred EEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC--EEEEeeCCCcEEEEeCCC
Confidence 4556667777777777777777777777777777743 345566677777777777543 777777777777777766
Q ss_pred CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Q 043707 193 KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLES 272 (347)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~ 272 (347)
+...... ....+|...|.+++| ++.+|++|+.||.|++||+++++++..
T Consensus 243 ~~~~~~~-----------------------------~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 243 PTDITLR-----------------------------RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRT 291 (435)
T ss_dssp SSCCEEE-----------------------------EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCceee-----------------------------eEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEE
Confidence 5432111 122358999999999 678999999999999999999999999
Q ss_pred EecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 273 INAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 273 ~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+..|...|.++.+. +.++++|+.||.|++||++.+. ....+.+|...|.+++| ++.+|++|+.||+
T Consensus 292 ~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~~------~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 292 LNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECGA------CLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp EECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTCC------EEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred EcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCCC------EEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 99999999999994 4599999999999999998543 56677889999999999 7899999999984
No 78
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=2.1e-25 Score=198.81 Aligned_cols=195 Identities=14% Similarity=0.272 Sum_probs=150.3
Q ss_pred eeEeeeeccccEEEEeec----CCEEEEecCCCcEEEEeCCC-----------cceeeecCCCCeeEEEEeCC--CCEEE
Q 043707 115 LIGSIVRKEGHIYSLAAS----GDLLYTGSDSKNIRVWKNLK-----------EFSGFKSNSGLVKAIIITGD--SNKIF 177 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~----~~~l~tg~~dg~I~vwd~~~-----------~~~~~~~h~~~V~~l~~sp~--~~~l~ 177 (347)
++..+.+|.+.|.+++++ +++|++|+.||.|++||... ....+..|...|.+++|+|+ +.+|+
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 128 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLA 128 (351)
T ss_dssp EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEE
Confidence 566778899999999974 78999999999999999543 25677889999999999998 99999
Q ss_pred EEeCCCcEEEEecCCCCCceeeeec---------------------cccc---ccceEEeccCCCeEEEEeecce----e
Q 043707 178 TGHQDGKIRIWKVSRKNPSVHKRVG---------------------SLPT---FKDYVKSSVNPKNYVEVRRNRN----V 229 (347)
Q Consensus 178 s~~~Dg~I~vwd~~~~~~~~~~~~~---------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~----~ 229 (347)
+++.||.|++||+++++........ ..|. ...++....+....+....... .
T Consensus 129 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (351)
T 3f3f_A 129 CLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAA 208 (351)
T ss_dssp EEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEE
T ss_pred EecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeee
Confidence 9999999999999887643322110 0010 1122222222222222222221 2
Q ss_pred eeeecCCCeeEEEEcCCC----CEEEEEeCCCcEEEEeCCCC--------------------------------------
Q 043707 230 LKIRHYDAVSCLSLNAEQ----GLLYSGSWDKTLKVWRISDC-------------------------------------- 267 (347)
Q Consensus 230 ~~~~h~~~V~~l~~~~~~----~~l~s~s~dg~i~vwdl~~~-------------------------------------- 267 (347)
...+|...|++++|+|++ .+|++++.||.|++||++.+
T Consensus 209 ~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
T 3f3f_A 209 KLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKA 288 (351)
T ss_dssp ECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------------------------------
T ss_pred ecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceee
Confidence 233689999999999998 89999999999999999865
Q ss_pred --------EEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCC
Q 043707 268 --------KCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 268 --------~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~ 309 (347)
+++..+.+|...|++++|+|++ +|++++.||.|++||+...+
T Consensus 289 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 289 ELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp --CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred eecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 6778888999999999999998 89999999999999998544
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=5.7e-25 Score=193.75 Aligned_cols=195 Identities=15% Similarity=0.252 Sum_probs=145.9
Q ss_pred ceeEeeeeccccEEEEeec----CCEEEEecCCCcEEEEeCCC----cceeeecCCCCeeEEEEeCC--CCEEEEEeCCC
Q 043707 114 GLIGSIVRKEGHIYSLAAS----GDLLYTGSDSKNIRVWKNLK----EFSGFKSNSGLVKAIIITGD--SNKIFTGHQDG 183 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~----~~~l~tg~~dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp~--~~~l~s~~~Dg 183 (347)
.++.++.+|++.|++++++ +++|++|+.||+|+|||... ....+..|...|.+++|+|+ +.+|++|+.||
T Consensus 44 ~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~ 123 (297)
T 2pm7_B 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG 123 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC
Confidence 3567889999999999974 68999999999999999653 34567789999999999997 88999999999
Q ss_pred cEEEEecCCCCCceeee----------eccccc-------------ccceEEeccCCCe-EEEEeecc-----eeeeeec
Q 043707 184 KIRIWKVSRKNPSVHKR----------VGSLPT-------------FKDYVKSSVNPKN-YVEVRRNR-----NVLKIRH 234 (347)
Q Consensus 184 ~I~vwd~~~~~~~~~~~----------~~~~~~-------------~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~h 234 (347)
+|++||++......... +...|. ...++....+... ++++.... ...+.+|
T Consensus 124 ~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 124 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 99999998763211111 111111 1123333334332 23333322 1234579
Q ss_pred CCCeeEEEEcCCC---CEEEEEeCCCcEEEEeCCCCE---EEEEE--ecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEc
Q 043707 235 YDAVSCLSLNAEQ---GLLYSGSWDKTLKVWRISDCK---CLESI--NAHDDAINSVVAGFDS-LVFTGSADGTVKVWRR 305 (347)
Q Consensus 235 ~~~V~~l~~~~~~---~~l~s~s~dg~i~vwdl~~~~---~~~~~--~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~ 305 (347)
...|.+++|+|++ .+|++++.|++|+|||++..+ ....+ ..|...|.+++|+|++ +|++++.|+.|+||+.
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 9999999999984 899999999999999997642 22233 4678899999999998 8999999999999998
Q ss_pred ccC
Q 043707 306 ELQ 308 (347)
Q Consensus 306 ~~~ 308 (347)
...
T Consensus 284 ~~~ 286 (297)
T 2pm7_B 284 NLE 286 (297)
T ss_dssp CTT
T ss_pred CCC
Confidence 643
No 80
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1e-25 Score=226.63 Aligned_cols=194 Identities=9% Similarity=0.003 Sum_probs=155.2
Q ss_pred eeeeccccEEEEeec--CCEEEEecCCCcEEEEeCCCcce-eeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCC
Q 043707 118 SIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNLKEFS-GFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKN 194 (347)
Q Consensus 118 ~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~~~~~-~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~ 194 (347)
...+|.+.|++++++ +++||+|+.||+|+||+...... ....|...|.+++|+| +++|++++.|++|+|||+++++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 345899999999874 77999999999999999654322 2234788999999999 7799999999999999998875
Q ss_pred CceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEE----
Q 043707 195 PSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCL---- 270 (347)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~---- 270 (347)
..... .|...|++++|+|++.+|++|+.||+|++||++++++.
T Consensus 91 ~~~~~---------------------------------~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 91 VLTTV---------------------------------FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp EEEEE---------------------------------ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred EEEEE---------------------------------cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
Confidence 32111 26678999999999999999999999999999988764
Q ss_pred -------EEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeeh-------------hhhhccCCcEE
Q 043707 271 -------ESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLA-------------QVLLKQENAIT 328 (347)
Q Consensus 271 -------~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~-------------~~~~~h~~~V~ 328 (347)
..+++|.+.|.+++|+|++ .|++|+.||.| +||++..... ..... .....|...|+
T Consensus 138 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~h~~~V~ 215 (902)
T 2oaj_A 138 DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIK-QSFIYELPPFAPGGDFSEKTNEKRTPKVI 215 (902)
T ss_dssp CCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEE-EEECCCBCTTCCCSTTCCCTTSCBCCCEE
T ss_pred ccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceE-EEEecccCCcCCCcccccccccccCCCeE
Confidence 2235688999999999973 89999999999 9999854320 00000 01233567899
Q ss_pred EEEEccCCCEEEEecCCCC
Q 043707 329 ALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 329 ~l~~~p~~~~l~sgs~DG~ 347 (347)
+++|+|+|++|++|+.||+
T Consensus 216 ~v~fspdg~~lasgs~Dg~ 234 (902)
T 2oaj_A 216 QSLYHPNSLHIITIHEDNS 234 (902)
T ss_dssp EEEECTTSSEEEEEETTCC
T ss_pred EEEEcCCCCEEEEEECCCe
Confidence 9999999999999999985
No 81
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=3.2e-25 Score=220.91 Aligned_cols=228 Identities=18% Similarity=0.245 Sum_probs=180.7
Q ss_pred ceeEeeeeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
.+.+.+.+|.+.|.+++++ +.+|++|+.||.|+|||.. +....+..|.+.|.+++|+|++++|++|+.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3467889999999999875 7799999999999999964 45678889999999999999999999999999999999
Q ss_pred cCCCCCceeee--------ecccccccceEEeccCCCeEEEE-eec--ceeeeeecCCCeeEEEEcC-CCCEEEEEeCCC
Q 043707 190 VSRKNPSVHKR--------VGSLPTFKDYVKSSVNPKNYVEV-RRN--RNVLKIRHYDAVSCLSLNA-EQGLLYSGSWDK 257 (347)
Q Consensus 190 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~dg 257 (347)
+.+++...... +...+....++....++...+.. ... ......+|...|.+++|+| ++..|++++.||
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 99886533222 11122222333333332222221 112 1234456899999999999 889999999999
Q ss_pred cEEEEeCCCCEEEEEEecCC-CcEEEEEeCC--CC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEc
Q 043707 258 TLKVWRISDCKCLESINAHD-DAINSVVAGF--DS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVN 333 (347)
Q Consensus 258 ~i~vwdl~~~~~~~~~~~h~-~~v~~i~~~~--~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~ 333 (347)
+|++||+++++....+..+. ..+.++.|+| ++ +|++++.||.|++||++... ....+..|...|++++|+
T Consensus 164 ~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~------~~~~~~~~~~~v~~~~~~ 237 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS------CVATLEGHMSNVSFAVFH 237 (814)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE------EEEEEECCSSCEEEEEEC
T ss_pred eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc------EEEEEcCCCCCEEEEEEc
Confidence 99999999888887777665 8899999998 66 99999999999999997433 456677899999999999
Q ss_pred cCCCEEEEecCCCC
Q 043707 334 QESAVVYCGSSDGL 347 (347)
Q Consensus 334 p~~~~l~sgs~DG~ 347 (347)
|++++|++++.||.
T Consensus 238 ~~~~~l~~~~~dg~ 251 (814)
T 3mkq_A 238 PTLPIIISGSEDGT 251 (814)
T ss_dssp SSSSEEEEEETTSC
T ss_pred CCCCEEEEEeCCCe
Confidence 99999999999984
No 82
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=2.6e-25 Score=200.26 Aligned_cols=190 Identities=16% Similarity=0.220 Sum_probs=156.5
Q ss_pred eeeeccccEEEEeecC------CEEEEecCCCcEEEEeCC--Ccceeeec-----CCCCeeEEEEeCC----CCEEEEEe
Q 043707 118 SIVRKEGHIYSLAASG------DLLYTGSDSKNIRVWKNL--KEFSGFKS-----NSGLVKAIIITGD----SNKIFTGH 180 (347)
Q Consensus 118 ~l~~h~~~V~~l~~~~------~~l~tg~~dg~I~vwd~~--~~~~~~~~-----h~~~V~~l~~sp~----~~~l~s~~ 180 (347)
...+|.+.|++++++. .++++++.++.|++||.. +.+..+.. |...|.+++|+|+ +++|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 3447999999999872 356666667799999965 23334433 5678999999998 67999999
Q ss_pred CCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC-CCCEEEEEeCCCcE
Q 043707 181 QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA-EQGLLYSGSWDKTL 259 (347)
Q Consensus 181 ~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~dg~i 259 (347)
.||.|++||+.+++..... .+|...|.+++|+| ++.+|++++.||.|
T Consensus 93 ~dg~i~v~d~~~~~~~~~~--------------------------------~~~~~~i~~~~~~~~~~~~l~s~~~dg~i 140 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHY--------------------------------VGHGNAINELKFHPRDPNLLLSVSKDHAL 140 (366)
T ss_dssp TTCEEEEECTTTCCEEEEE--------------------------------ESCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred CCCEEEEEEchhceEeeee--------------------------------cCCCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 9999999999877532211 24899999999999 89999999999999
Q ss_pred EEEeCCCCEEEEEE---ecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhh--------------
Q 043707 260 KVWRISDCKCLESI---NAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLL-------------- 321 (347)
Q Consensus 260 ~vwdl~~~~~~~~~---~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~-------------- 321 (347)
++||+++++.+..+ ..|...|.+++|+|++ +|++++.||.|++||++... ....+.
T Consensus 141 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~~~~~~~~~ 214 (366)
T 3k26_A 141 RLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR------MMNAIKESYDYNPNKTNRPF 214 (366)
T ss_dssp EEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHH------HHHHHHHHHTCCGGGCSSCC
T ss_pred EEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCc------cccccceeEEecCCCCcccc
Confidence 99999999999998 6899999999999987 99999999999999997432 222222
Q ss_pred --------------ccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 322 --------------KQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 322 --------------~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
.|...|.+++|+ +++|++++.||.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~ 252 (366)
T 3k26_A 215 ISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENA 252 (366)
T ss_dssp CCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSE
T ss_pred cceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCE
Confidence 389999999999 789999999873
No 83
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.9e-26 Score=203.62 Aligned_cols=187 Identities=10% Similarity=0.031 Sum_probs=142.1
Q ss_pred ccEEEEeecCCEEEEecCCCcEEEEeCCCc-----------ceeee-cCCCCeeEEEEeC--CCCEEEEEeCCCcEEEEe
Q 043707 124 GHIYSLAASGDLLYTGSDSKNIRVWKNLKE-----------FSGFK-SNSGLVKAIIITG--DSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 124 ~~V~~l~~~~~~l~tg~~dg~I~vwd~~~~-----------~~~~~-~h~~~V~~l~~sp--~~~~l~s~~~Dg~I~vwd 189 (347)
+.|.++.+... +++|+.|++|++|+.... +..+. .|.+.|.+++|+| ++++|++|+.||+|++||
T Consensus 77 ~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd 155 (343)
T 3lrv_A 77 PNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQS 155 (343)
T ss_dssp ECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEE
T ss_pred CCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEE
Confidence 34445555555 999999999999975422 22222 5668899999999 999999999999999999
Q ss_pred cCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEE
Q 043707 190 VSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKC 269 (347)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~ 269 (347)
+++++...... ..|...|.+++|+|++.+|++|+.||.|++||+++++.
T Consensus 156 ~~~~~~~~~~~-------------------------------~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 156 YEDDSQYIVHS-------------------------------AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp SSSSCEEEEEC-------------------------------CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred CCCCcEEEEEe-------------------------------cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 99876421111 12566799999999999999999999999999999988
Q ss_pred E-EEEec-CCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcE--EEEEEccCCCEEEEecC
Q 043707 270 L-ESINA-HDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAI--TALAVNQESAVVYCGSS 344 (347)
Q Consensus 270 ~-~~~~~-h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V--~~l~~~p~~~~l~sgs~ 344 (347)
+ ..+.. |...|.+++|+|++ +|++++ |+.|++||++..... .....+..|...+ .+++|+|++++|++++.
T Consensus 205 ~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 205 ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT---LAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC---BSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc---eeecccccccccccceEEEECCCCCEEEEecC
Confidence 7 88888 99999999999998 788888 559999999865320 0112222233344 46999999999999876
Q ss_pred -CC
Q 043707 345 -DG 346 (347)
Q Consensus 345 -DG 346 (347)
|+
T Consensus 281 ~d~ 283 (343)
T 3lrv_A 281 ESN 283 (343)
T ss_dssp TTT
T ss_pred CCC
Confidence 64
No 84
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.94 E-value=8.9e-25 Score=200.58 Aligned_cols=191 Identities=16% Similarity=0.211 Sum_probs=158.9
Q ss_pred eEeeee-ccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec
Q 043707 116 IGSIVR-KEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV 190 (347)
Q Consensus 116 i~~l~~-h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~ 190 (347)
...+.. |.+.|.++++ ++++|++|+.||.|++||.. +....+.+|...|.+++|++ ++|++|+.||.|++||+
T Consensus 126 ~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~i~d~ 203 (401)
T 4aez_A 126 SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR--HVLSSGSRSGAIHHHDV 203 (401)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEET
T ss_pred eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECC--CEEEEEcCCCCEEEEec
Confidence 333433 7889999987 57799999999999999965 45777889999999999954 59999999999999999
Q ss_pred CCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEE
Q 043707 191 SRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCL 270 (347)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~ 270 (347)
+........ ..+|...|.+++|+|++.+|++++.|+.|++||+++++++
T Consensus 204 ~~~~~~~~~-------------------------------~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 204 RIANHQIGT-------------------------------LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK 252 (401)
T ss_dssp TSSSCEEEE-------------------------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE
T ss_pred ccCcceeeE-------------------------------EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc
Confidence 854322111 2248999999999999999999999999999999999999
Q ss_pred EEEecCCCcEEEEEeCCCC--EEEEEe--CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEE--ecC
Q 043707 271 ESINAHDDAINSVVAGFDS--LVFTGS--ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYC--GSS 344 (347)
Q Consensus 271 ~~~~~h~~~v~~i~~~~~~--~l~s~~--~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~s--gs~ 344 (347)
..+..|...|.+++|+|++ ++++++ .|+.|++||++... +...+ .+...|.+++|+|++++|++ |+.
T Consensus 253 ~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~------~~~~~-~~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 253 FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA------RVNTV-DAGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp EEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC------EEEEE-ECSSCEEEEEECSSSSEEEEEECTT
T ss_pred EEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC------EEEEE-eCCCcEEEEEECCCCCeEEEEeecC
Confidence 9999999999999999976 777765 79999999998543 23333 36678999999999999999 447
Q ss_pred CC
Q 043707 345 DG 346 (347)
Q Consensus 345 DG 346 (347)
||
T Consensus 326 dg 327 (401)
T 4aez_A 326 DN 327 (401)
T ss_dssp TC
T ss_pred CC
Confidence 76
No 85
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=3.4e-25 Score=203.33 Aligned_cols=187 Identities=19% Similarity=0.225 Sum_probs=152.7
Q ss_pred EeecCC---EEEEecCCCcEEEEeCCC------cceeeecCCCCeeEEEEeC-CCCEEEEEeCCCcEEEEecCCCCCcee
Q 043707 129 LAASGD---LLYTGSDSKNIRVWKNLK------EFSGFKSNSGLVKAIIITG-DSNKIFTGHQDGKIRIWKVSRKNPSVH 198 (347)
Q Consensus 129 l~~~~~---~l~tg~~dg~I~vwd~~~------~~~~~~~h~~~V~~l~~sp-~~~~l~s~~~Dg~I~vwd~~~~~~~~~ 198 (347)
+.++++ ++++|+.||.|+||+..+ ....+.+|.+.|.+++|+| ++++|++|+.||+|+|||+.++.....
T Consensus 40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~ 119 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLP 119 (402)
T ss_dssp EEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSC
T ss_pred EEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccc
Confidence 445554 344578999999999643 3556788999999999999 999999999999999999988743210
Q ss_pred eeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCEEEEEE--ec
Q 043707 199 KRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ-GLLYSGSWDKTLKVWRISDCKCLESI--NA 275 (347)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~s~s~dg~i~vwdl~~~~~~~~~--~~ 275 (347)
.. .......+|...|.+++|+|++ .+|++++.||+|++||+++++++..+ ..
T Consensus 120 ~~-------------------------~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 174 (402)
T 2aq5_A 120 LR-------------------------EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV 174 (402)
T ss_dssp BC-------------------------SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT
T ss_pred cC-------------------------CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC
Confidence 00 0111223599999999999997 79999999999999999999999999 88
Q ss_pred CCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhh-hccCCc-EEEEEEccCCCEEEEe---cCCC
Q 043707 276 HDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVL-LKQENA-ITALAVNQESAVVYCG---SSDG 346 (347)
Q Consensus 276 h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~-~~h~~~-V~~l~~~p~~~~l~sg---s~DG 346 (347)
|...|.+++|+|++ +|++++.||.|++||++... ....+ ..|... +.+++|+|++++|++| +.||
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGT------VVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE------EEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCc------eeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 99999999999998 89999999999999998543 34444 567665 8999999999999998 6665
No 86
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=4.3e-25 Score=199.60 Aligned_cols=232 Identities=12% Similarity=0.102 Sum_probs=154.2
Q ss_pred eeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEE-EEEeCCCcEEEEecC
Q 043707 115 LIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKI-FTGHQDGKIRIWKVS 191 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l-~s~~~Dg~I~vwd~~ 191 (347)
.+..+..|.+.|+++++ +|++|++|+.++ ++||+..........+...+..+++.++++.+ ++++.|++|++||+.
T Consensus 11 ~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~ 89 (355)
T 3vu4_A 11 PIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDV 89 (355)
T ss_dssp --------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETT
T ss_pred CccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECC
Confidence 35566788889988886 477899888775 78998664433333333457888888877776 567788899999988
Q ss_pred CCCCceeeeecc-------cc-----------------cc----c-------------ceEEe---ccCCC-eEEEEeec
Q 043707 192 RKNPSVHKRVGS-------LP-----------------TF----K-------------DYVKS---SVNPK-NYVEVRRN 226 (347)
Q Consensus 192 ~~~~~~~~~~~~-------~~-----------------~~----~-------------~~~~~---~~~~~-~~~~~~~~ 226 (347)
+++......... .+ .. . .++.. ..++. .++++...
T Consensus 90 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~ 169 (355)
T 3vu4_A 90 KKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSS 169 (355)
T ss_dssp TTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-
T ss_pred CCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCC
Confidence 775432211100 00 00 0 01111 11111 11222221
Q ss_pred c-----------------eeeeeecCCCeeEEEEcCCCCEEEEEeCCCc-EEEEeCCCCEEEEEEe-c-CCCcEEEEEeC
Q 043707 227 R-----------------NVLKIRHYDAVSCLSLNAEQGLLYSGSWDKT-LKVWRISDCKCLESIN-A-HDDAINSVVAG 286 (347)
Q Consensus 227 ~-----------------~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~-i~vwdl~~~~~~~~~~-~-h~~~v~~i~~~ 286 (347)
. .....+|...|++++|+|++.+|++|+.|++ |+|||+++++++..+. + |...|.+++|+
T Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 170 GSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp -----------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEEC
T ss_pred CccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEEC
Confidence 1 3445679999999999999999999999999 9999999999999998 5 99999999999
Q ss_pred CCC-EEEEEeCCCcEEEEEcccCCccceeeehh-----------------hhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 287 FDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQ-----------------VLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 287 ~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~-----------------~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
|++ +|++++.|++|++||++.........+.. ....+......++|++++++|++++.||.
T Consensus 250 ~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~ 328 (355)
T 3vu4_A 250 TDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRM 328 (355)
T ss_dssp TTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTE
T ss_pred CCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCe
Confidence 998 99999999999999997543211111100 00111223467999999999999999983
No 87
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=6.9e-25 Score=194.98 Aligned_cols=193 Identities=16% Similarity=0.279 Sum_probs=143.9
Q ss_pred eeEeeeeccccEEEEeec----CCEEEEecCCCcEEEEeCCC----cceeeecCCCCeeEEEEeCC--CCEEEEEeCCCc
Q 043707 115 LIGSIVRKEGHIYSLAAS----GDLLYTGSDSKNIRVWKNLK----EFSGFKSNSGLVKAIIITGD--SNKIFTGHQDGK 184 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~----~~~l~tg~~dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp~--~~~l~s~~~Dg~ 184 (347)
++..+.+|.+.|+++++. +++|++|+.|++|++||... ....+.+|...|.+++|+|+ +.+|++|+.||+
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~ 128 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGA 128 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSC
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCC
Confidence 467788999999999974 68999999999999999753 34567789999999999997 789999999999
Q ss_pred EEEEecCCCCCcee-e----------eeccccc-----------------ccceEEeccCCC-eEEEEeec----ceeee
Q 043707 185 IRIWKVSRKNPSVH-K----------RVGSLPT-----------------FKDYVKSSVNPK-NYVEVRRN----RNVLK 231 (347)
Q Consensus 185 I~vwd~~~~~~~~~-~----------~~~~~~~-----------------~~~~~~~~~~~~-~~~~~~~~----~~~~~ 231 (347)
|++||++....... . .+...|. ...++....+.. .+++.... ....+
T Consensus 129 i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 129 ISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp EEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC
T ss_pred EEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec
Confidence 99999986532100 0 0000111 012222233332 23333322 12234
Q ss_pred eecCCCeeEEEEcCCC----CEEEEEeCCCcEEEEeCCCC---E-EEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEE
Q 043707 232 IRHYDAVSCLSLNAEQ----GLLYSGSWDKTLKVWRISDC---K-CLESINAHDDAINSVVAGFDS-LVFTGSADGTVKV 302 (347)
Q Consensus 232 ~~h~~~V~~l~~~~~~----~~l~s~s~dg~i~vwdl~~~---~-~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~v 302 (347)
.+|...|.+++|+|++ .+|++++.|++|+|||+++. + ....+..|...|.+++|+|++ +|++++.|++|++
T Consensus 209 ~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~l 288 (316)
T 3bg1_A 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTL 288 (316)
T ss_dssp BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEE
T ss_pred ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEE
Confidence 5799999999999986 89999999999999999762 1 233456789999999999998 8999999999999
Q ss_pred EEccc
Q 043707 303 WRREL 307 (347)
Q Consensus 303 wd~~~ 307 (347)
|+...
T Consensus 289 w~~~~ 293 (316)
T 3bg1_A 289 WKESV 293 (316)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 99863
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=2.2e-24 Score=201.37 Aligned_cols=224 Identities=17% Similarity=0.331 Sum_probs=171.0
Q ss_pred ceeEeeeeccccEEEEeecC-CEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEe--CCCCEEEEEeCCCcEEEE
Q 043707 114 GLIGSIVRKEGHIYSLAASG-DLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIIT--GDSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~-~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~s--p~~~~l~s~~~Dg~I~vw 188 (347)
..+..+.+|.+.|+++.+.. .+|++|+.||+|++||.. +....+.+|.+.|.+++|+ +++.+|++|+.||.|++|
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred cEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 46788889999999999863 499999999999999965 4567788899999999998 577899999999999999
Q ss_pred ecCCCCCceeee---------------------ecc-------c-ccccceEEeccCCCeEE-EEeecce-eeeeecCCC
Q 043707 189 KVSRKNPSVHKR---------------------VGS-------L-PTFKDYVKSSVNPKNYV-EVRRNRN-VLKIRHYDA 237 (347)
Q Consensus 189 d~~~~~~~~~~~---------------------~~~-------~-~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~h~~~ 237 (347)
|+++........ ... + +....++....+....+ ++..... ....+|...
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 312 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDR 312 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCC
Confidence 998875432110 000 0 00111222222222221 2122222 223468999
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeeh
Q 043707 238 VSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLA 317 (347)
Q Consensus 238 V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~ 317 (347)
|.+++|+|++.+|++|+.||+|++||+++++++..+.+|...|.++.++ +.+|++++.||.|++||++.... .
T Consensus 313 v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~v~vwd~~~~~~------~ 385 (464)
T 3v7d_B 313 IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-DKFLVSAAADGSIRGWDANDYSR------K 385 (464)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-SSEEEEEETTSEEEEEETTTCCE------E
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc-CCEEEEEeCCCcEEEEECCCCce------e
Confidence 9999999999999999999999999999999999999999999999997 46999999999999999985432 1
Q ss_pred hhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 318 QVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 318 ~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
....|...+..++|++++++|++|+ ||
T Consensus 386 -~~~~~~~~~~~~~~~~~~~~l~~~~-dg 412 (464)
T 3v7d_B 386 -FSYHHTNLSAITTFYVSDNILVSGS-EN 412 (464)
T ss_dssp -EEEECTTCCCEEEEEECSSEEEEEE-TT
T ss_pred -eeecCCCCccEEEEEeCCCEEEEec-CC
Confidence 1123566788899999999999998 65
No 89
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=4e-25 Score=197.58 Aligned_cols=228 Identities=14% Similarity=0.091 Sum_probs=165.7
Q ss_pred EeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCC-c----ceeeecCCCCeeEEEEeCCCC-EEEEEeCCCcEEEE
Q 043707 117 GSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK-E----FSGFKSNSGLVKAIIITGDSN-KIFTGHQDGKIRIW 188 (347)
Q Consensus 117 ~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~-~----~~~~~~h~~~V~~l~~sp~~~-~l~s~~~Dg~I~vw 188 (347)
....+|.+.|+++++ ++++|++|+.||.|++|+... . ...+..|...|.+++|+|+++ +|++|+.||.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 344579999999886 578999999999999999542 2 456678999999999999999 99999999999999
Q ss_pred ec-CCCCCceeee---------ecccccccceEEeccCCCeE-EEEee---------cceeeeeecCCCeeEEEEcCCCC
Q 043707 189 KV-SRKNPSVHKR---------VGSLPTFKDYVKSSVNPKNY-VEVRR---------NRNVLKIRHYDAVSCLSLNAEQG 248 (347)
Q Consensus 189 d~-~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~~~~~~h~~~V~~l~~~~~~~ 248 (347)
|+ .+++...... +...+ ...++....+.... ++... ........|...|.+++|++++
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR- 162 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-
T ss_pred EeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-
Confidence 99 7764311111 11112 12222222222111 11122 2223334588999999999887
Q ss_pred EEEEEeCCCcEEEEeCCC-CE--EEEEEecCCCcEEEEEeCC-CC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhcc
Q 043707 249 LLYSGSWDKTLKVWRISD-CK--CLESINAHDDAINSVVAGF-DS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQ 323 (347)
Q Consensus 249 ~l~s~s~dg~i~vwdl~~-~~--~~~~~~~h~~~v~~i~~~~-~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h 323 (347)
+++++.|+.|++||+++ ++ .......|...|.+++|+| ++ +|++++.||.|++|+++..+..........+..|
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 99999999999999988 54 3334456888999999999 76 9999999999999999865100001134445555
Q ss_pred C---------CcEEEEEEccCCCEEEEecCCCC
Q 043707 324 E---------NAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 324 ~---------~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
. ..|++++|+|++++|++|+.||.
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 274 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI 274 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC
T ss_pred cccccccccceeEEEEEEcCCCCEEEEecCCce
Confidence 4 49999999999999999999984
No 90
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.7e-25 Score=208.61 Aligned_cols=193 Identities=13% Similarity=0.148 Sum_probs=152.9
Q ss_pred eccccEEEEee--cCCEEEEecCCCcEEEEeCCCcceeeecCCC-----CeeEEEEeCCCCEEEEEeCCCcEEEEecCCC
Q 043707 121 RKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLKEFSGFKSNSG-----LVKAIIITGDSNKIFTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 121 ~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~~~~~~~h~~-----~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~ 193 (347)
.|+..|++++| +|++||+++.||.|+|||....+..+. |.. .|.+++|+|+|++|++|+.||+|+|||+.++
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 45788998886 578999999999999999766666666 665 4999999999999999999999999999887
Q ss_pred CCcee--eeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEE--
Q 043707 194 NPSVH--KRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKC-- 269 (347)
Q Consensus 194 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~-- 269 (347)
..... ..+..+. ....+|...|.+++|+|++ +++++.|+++++||+..++.
T Consensus 162 ~l~~~~~i~l~ti~-----------------------~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 162 SENTPEFYFESSIR-----------------------LSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp TTTCCCCEEEEEEE-----------------------CSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC
T ss_pred ccccccceeeeeee-----------------------cccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc
Confidence 53110 0000000 0001478899999999998 88888999999999988773
Q ss_pred -EEEE-ecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEE--ccCCCEEEEecCC
Q 043707 270 -LESI-NAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAV--NQESAVVYCGSSD 345 (347)
Q Consensus 270 -~~~~-~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~--~p~~~~l~sgs~D 345 (347)
..++ .+|...|.+++|+ +..||+++ +++|++||+..+. ......+|...|..++| +|++..|+++++|
T Consensus 217 ~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~------~~~~~~gh~~~V~~va~~~s~d~~~La~a~ed 288 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYS------ISSLKTGSLENFHIIPLNHEKESTILLMSNKT 288 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTE------EEEEECSCCSCCCEEEETTCSSCEEEEECSSC
T ss_pred ceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCe------EEEEEcCCCceEEEEEeeeCCCCCEEEEEcCC
Confidence 3567 4788999999999 67888887 6999999997432 21223379999999999 9999999999998
Q ss_pred CC
Q 043707 346 GL 347 (347)
Q Consensus 346 G~ 347 (347)
|+
T Consensus 289 G~ 290 (588)
T 2j04_A 289 SY 290 (588)
T ss_dssp EE
T ss_pred CC
Confidence 84
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=2e-25 Score=215.07 Aligned_cols=222 Identities=16% Similarity=0.201 Sum_probs=172.9
Q ss_pred ceeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCC
Q 043707 114 GLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~ 193 (347)
..+..+.+|.+.|.++.+ ++ |++|+.||.|++|+.. .+. ..|...|.+++| +++..|++++.|+.|++||+...
T Consensus 330 ~~~~~~~~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~-~~~--~~~~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~ 403 (615)
T 1pgu_A 330 EVLKTISGHNKGITALTV-NP-LISGSYDGRIMEWSSS-SMH--QDHSNLIVSLDN-SKAQEYSSISWDDTLKVNGITKH 403 (615)
T ss_dssp EEEEEECCCSSCEEEEET-TT-TEEEETTSCEEETTTT-EEE--CCCCSCEEEEEC-CSTTCCEEEETTTEEEETTEEEE
T ss_pred cEEEEEeCCCCCEEEEEe-cC-cEEECCCCeEEEEEch-hhc--CcccCceEEEEE-CCCcEEEEEeCCCCEEEEEcccC
Confidence 467788899999999999 88 9999999999999987 333 789999999999 66779999999999999998754
Q ss_pred CCce----------------------------------eeeeccccc----ccceEEecc--CCCe-EEEEeecce--ee
Q 043707 194 NPSV----------------------------------HKRVGSLPT----FKDYVKSSV--NPKN-YVEVRRNRN--VL 230 (347)
Q Consensus 194 ~~~~----------------------------------~~~~~~~~~----~~~~~~~~~--~~~~-~~~~~~~~~--~~ 230 (347)
+... ......... ...++.... +... +++...... ..
T Consensus 404 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~ 483 (615)
T 1pgu_A 404 EFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDL 483 (615)
T ss_dssp ECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEEC
T ss_pred cccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccc
Confidence 3100 000000000 011222222 2211 111111111 33
Q ss_pred eeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEec-CCCcEEEEEeCC----------CC-EEEEEeCCC
Q 043707 231 KIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINA-HDDAINSVVAGF----------DS-LVFTGSADG 298 (347)
Q Consensus 231 ~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~-h~~~v~~i~~~~----------~~-~l~s~~~dg 298 (347)
...|...|.+++|+|++.+|++++.||.|++||+.+++++..+.+ |...|++++|+| ++ +|++++.||
T Consensus 484 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg 563 (615)
T 1pgu_A 484 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT 563 (615)
T ss_dssp SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS
T ss_pred cCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCC
Confidence 346899999999999999999999999999999999999999988 999999999999 77 999999999
Q ss_pred cEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 299 TVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 299 ~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
.|++||+....+ +...+.+|...|++++|+|+++ |++++.||+
T Consensus 564 ~i~iw~~~~~~~-----~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~ 606 (615)
T 1pgu_A 564 NIFIYSVKRPMK-----IIKALNAHKDGVNNLLWETPST-LVSSGADAC 606 (615)
T ss_dssp CEEEEESSCTTC-----CEEETTSSTTCEEEEEEEETTE-EEEEETTSC
T ss_pred cEEEEECCCCce-----echhhhcCccceEEEEEcCCCC-eEEecCCce
Confidence 999999986533 5667889999999999999999 999999985
No 92
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.94 E-value=4.7e-25 Score=204.61 Aligned_cols=195 Identities=19% Similarity=0.371 Sum_probs=164.6
Q ss_pred ceeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCCCc--c---eeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEE
Q 043707 114 GLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLKE--F---SGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~~~--~---~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vw 188 (347)
..+..+.+|.+.|.++.+++++|++|+.||.|++||.... . ..+.+|...|.+++| ++++|++|+.||.|++|
T Consensus 204 ~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW 281 (435)
T ss_dssp CEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred cEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEE
Confidence 4677888999999999999999999999999999996533 2 567789999999999 66799999999999999
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK 268 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~ 268 (347)
|+++++..... .+|...|.+++++ +.+|++|+.||+|++||+++++
T Consensus 282 d~~~~~~~~~~--------------------------------~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~ 327 (435)
T 1p22_A 282 NTSTCEFVRTL--------------------------------NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 327 (435)
T ss_dssp ETTTCCEEEEE--------------------------------ECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC
T ss_pred ECCcCcEEEEE--------------------------------cCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCC
Confidence 99887532221 1488899999994 6899999999999999999999
Q ss_pred EEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccc---eeeehhhhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 269 CLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGT---KHFLAQVLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 269 ~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~---~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
++..+.+|...|.++.| ...+|++|+.||.|++||++...... .......+.+|...|++++| ++.+|++|+.|
T Consensus 328 ~~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~D 404 (435)
T 1p22_A 328 CLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHD 404 (435)
T ss_dssp EEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSS
T ss_pred EEEEEeCCcCcEEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCC
Confidence 99999999999999999 34599999999999999997543210 11145567789999999999 68899999999
Q ss_pred CC
Q 043707 346 GL 347 (347)
Q Consensus 346 G~ 347 (347)
|+
T Consensus 405 g~ 406 (435)
T 1p22_A 405 DT 406 (435)
T ss_dssp SE
T ss_pred CE
Confidence 84
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.94 E-value=2.7e-24 Score=214.19 Aligned_cols=227 Identities=17% Similarity=0.290 Sum_probs=175.6
Q ss_pred ceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
..+..+..|.+.|.++.| ++++|++|+.||.|++||.. +....+.+|.+.|.+++|+|++++|++++.||.|++||
T Consensus 46 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 125 (814)
T 3mkq_A 46 VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (814)
T ss_dssp EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEE
Confidence 367788889999999886 57899999999999999954 45677889999999999999999999999999999999
Q ss_pred cCCCCCceeee---------ecccc-cccceEEeccCCCeEE-EEeecce--eeeeecCCCeeEEEEcC--CCCEEEEEe
Q 043707 190 VSRKNPSVHKR---------VGSLP-TFKDYVKSSVNPKNYV-EVRRNRN--VLKIRHYDAVSCLSLNA--EQGLLYSGS 254 (347)
Q Consensus 190 ~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~h~~~V~~l~~~~--~~~~l~s~s 254 (347)
+.++....... +...| ....++....+....+ +...... .....+...+.+++|+| ++.+|++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 98763221111 11122 1122222222222111 1111111 22223458899999999 899999999
Q ss_pred CCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEc
Q 043707 255 WDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVN 333 (347)
Q Consensus 255 ~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~ 333 (347)
.||.|++||+++++++..+..|...|.+++|+|++ +|++++.||.|++||+.... ....+..|...|.+++|+
T Consensus 206 ~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~------~~~~~~~~~~~v~~~~~~ 279 (814)
T 3mkq_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK------VEKTLNVGLERSWCIATH 279 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS------EEEEECCSSSSEEEEEEC
T ss_pred CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc------EEEEeecCCCcEEEEEEc
Confidence 99999999999999999999999999999999998 99999999999999997543 456667788899999999
Q ss_pred cCCC--EEEEecCCC
Q 043707 334 QESA--VVYCGSSDG 346 (347)
Q Consensus 334 p~~~--~l~sgs~DG 346 (347)
|++. ++++++.++
T Consensus 280 ~~~~~~~~~~~~~~~ 294 (814)
T 3mkq_A 280 PTGRKNYIASGFDNG 294 (814)
T ss_dssp TTCGGGEEEEEETTE
T ss_pred cCCCceEEEEEeCCC
Confidence 9986 577776554
No 94
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=4e-25 Score=194.35 Aligned_cols=191 Identities=10% Similarity=0.027 Sum_probs=141.1
Q ss_pred eeccccEEEEeecCCEEEEec--CCCcEEEEeC---CCcceeeecCCCCeeEEEEeC---CCCEEEEEeCCCcEEEEecC
Q 043707 120 VRKEGHIYSLAASGDLLYTGS--DSKNIRVWKN---LKEFSGFKSNSGLVKAIIITG---DSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 120 ~~h~~~V~~l~~~~~~l~tg~--~dg~I~vwd~---~~~~~~~~~h~~~V~~l~~sp---~~~~l~s~~~Dg~I~vwd~~ 191 (347)
.+|...|..+ ..++++.+++ .|+.|++|++ .+.+..+..|...+..++|++ ++..|++|+.|++|+|||++
T Consensus 133 ~g~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~ 211 (356)
T 2w18_A 133 SGNIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK 211 (356)
T ss_dssp EEEEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT
T ss_pred CCCeEEEEec-CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC
Confidence 3455556665 3555666643 6999999996 344667789999999999999 77999999999999999999
Q ss_pred CCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEE------------EEEeCCCcE
Q 043707 192 RKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLL------------YSGSWDKTL 259 (347)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l------------~s~s~dg~i 259 (347)
+++......... .+...+.+++|+|++.++ ++|+.|++|
T Consensus 212 TGk~l~tL~g~~-----------------------------~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tI 262 (356)
T 2w18_A 212 TGQLLKKMHIDD-----------------------------SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQL 262 (356)
T ss_dssp TCCEEEEEECCC--------------------------------CCCEEEEEEETTEEEEEEC------------CCEEE
T ss_pred CCcEEEEEcCCC-----------------------------cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEE
Confidence 987433322100 023467788899988776 668889999
Q ss_pred EEEeCCCCEEEEEE-----ecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEE-EEEEc
Q 043707 260 KVWRISDCKCLESI-----NAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAIT-ALAVN 333 (347)
Q Consensus 260 ~vwdl~~~~~~~~~-----~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~-~l~~~ 333 (347)
++||..+++++..+ .+|...+.+..++ ..++++++.|++|+|||+.++. +.+++.+|...+. .++|+
T Consensus 263 klWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk------~l~tL~gH~~~vvs~vafS 335 (356)
T 2w18_A 263 IVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQ------CTALLPPVSDQHWSFVKWS 335 (356)
T ss_dssp EEEETTTTEEEEEEEECCCTTCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTCS------EEEEECCC--CCCCEEEEC
T ss_pred EEEECCCCEEEEEEEeeccCCCcceeEccccC-CCEEEEEcCCCcEEEEECCCCc------EEEEecCCCCCeEEEEEEC
Confidence 99999999988766 3666555444443 3388999999999999998554 5677788877655 68999
Q ss_pred cCCCEEEEecCCCC
Q 043707 334 QESAVVYCGSSDGL 347 (347)
Q Consensus 334 p~~~~l~sgs~DG~ 347 (347)
|+|++|++|+.||+
T Consensus 336 PDG~~LaSGS~D~T 349 (356)
T 2w18_A 336 GTDSHLLAGQKDGN 349 (356)
T ss_dssp SSSSEEEEECTTSC
T ss_pred CCCCEEEEEECCCc
Confidence 99999999999986
No 95
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=1.8e-24 Score=225.11 Aligned_cols=226 Identities=15% Similarity=0.177 Sum_probs=175.7
Q ss_pred eEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecC
Q 043707 116 IGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~ 191 (347)
...+.+|.+.|+++++ ++++|++|+.||+|++||.. +....+.+|.+.|.+++|+|++++|++|+.||.|++||+.
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 3467789999999886 57799999999999999965 4567888999999999999999999999999999999999
Q ss_pred CCCCceeeeec--------ccccccc-eEEe-ccCCCe-EEEEeecc-eeeeeecCCCeeEEEEcCCCCEEEEEeCCCcE
Q 043707 192 RKNPSVHKRVG--------SLPTFKD-YVKS-SVNPKN-YVEVRRNR-NVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTL 259 (347)
Q Consensus 192 ~~~~~~~~~~~--------~~~~~~~-~~~~-~~~~~~-~~~~~~~~-~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i 259 (347)
+++........ ..+.... ++.. ..+... ++++.... .....+|...|.+++|+|++.+|++++.||+|
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v 767 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL 767 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeE
Confidence 88654332211 1111111 1222 222221 12222222 22345799999999999999999999999999
Q ss_pred EEEeCCCCEEEEEEe-------------------------------------------------------cCCCcEEEEE
Q 043707 260 KVWRISDCKCLESIN-------------------------------------------------------AHDDAINSVV 284 (347)
Q Consensus 260 ~vwdl~~~~~~~~~~-------------------------------------------------------~h~~~v~~i~ 284 (347)
++||+++++....+. +|...|.+++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 999998776554432 5777889999
Q ss_pred eCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 285 AGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 285 ~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
|+|++ ++++++.||.|++||+.... ....+.+|...|++++|+|++++|++++.||+
T Consensus 848 ~sp~~~~l~~~~~dg~v~vwd~~~~~------~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~ 905 (1249)
T 3sfz_A 848 FSPYDHLAVIALSQYCVELWNIDSRL------KVADCRGHLSWVHGVMFSPDGSSFLTASDDQT 905 (1249)
T ss_dssp ECSSTTEEEEECSSSCEEEEETTTTE------EEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCc------eeeecCCCccceEEEEECCCCCEEEEEeCCCe
Confidence 99987 89999999999999997543 45667789999999999999999999999984
No 96
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.94 E-value=1.8e-24 Score=201.19 Aligned_cols=230 Identities=19% Similarity=0.304 Sum_probs=176.8
Q ss_pred ccceeEeeeeccccEEEEeecCCEEEEecCCCcEEEEe--CCCcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 112 CNGLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWK--NLKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 112 ~~~~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd--~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
....+..+.+|...|.++.+++++|++|+.||.|++|| ..+....+.+|...|.+++| ++++|++|+.||.|++||
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd 265 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 265 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEE
T ss_pred cCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEE
Confidence 47778899999999999999999999999999999998 88888888999999999999 677999999999999999
Q ss_pred cCCCCCceeeeeccc-----c-cccceEEeccCCCeEE-EEeecce-eeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 043707 190 VSRKNPSVHKRVGSL-----P-TFKDYVKSSVNPKNYV-EVRRNRN-VLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKV 261 (347)
Q Consensus 190 ~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~v 261 (347)
+++++.......... . ....++....+....+ +...... ....+|...+.++.++ +++|++|+.||.|++
T Consensus 266 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~v 343 (445)
T 2ovr_B 266 PETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKI 343 (445)
T ss_dssp GGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEE
T ss_pred CCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEE
Confidence 988765443331111 1 1122223333322222 2222222 2234688888888875 679999999999999
Q ss_pred EeCCCCEEEEEEec---CCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCE
Q 043707 262 WRISDCKCLESINA---HDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAV 338 (347)
Q Consensus 262 wdl~~~~~~~~~~~---h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~ 338 (347)
||+++++++..+.. |...|.+++|+ ..+|++|+.||.|++||+..+... ..........|...|++++|+|++.+
T Consensus 344 wd~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~ 421 (445)
T 2ovr_B 344 WDIKTGQCLQTLQGPNKHQSAVTCLQFN-KNFVITSSDDGTVKLWDLKTGEFI-RNLVTLESGGSGGVVWRIRASNTKLV 421 (445)
T ss_dssp EETTTCCEEEEECSTTSCSSCEEEEEEC-SSEEEEEETTSEEEEEETTTCCEE-EEEEECTTGGGTCEEEEEEECSSEEE
T ss_pred EECCCCcEEEEEccCCCCCCCEEEEEEC-CCEEEEEeCCCeEEEEECCCCcee-eeeeccccCCCCceEEEEEecCCEEE
Confidence 99999999999986 88899999996 359999999999999999865421 10101122568889999999999999
Q ss_pred EEEecCCCC
Q 043707 339 VYCGSSDGL 347 (347)
Q Consensus 339 l~sgs~DG~ 347 (347)
|++|+.||+
T Consensus 422 la~~~~dg~ 430 (445)
T 2ovr_B 422 CAVGSRNGT 430 (445)
T ss_dssp EEEECSSSS
T ss_pred EEEcccCCC
Confidence 999999984
No 97
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=3.7e-25 Score=201.52 Aligned_cols=195 Identities=14% Similarity=0.151 Sum_probs=153.7
Q ss_pred eeEeeeecc---ccEEEEee--cCCEEEEecCCCcEEEEeCC-CcceeeecCCCCeeEEEEeCCCC-EEEEEeCCCcEEE
Q 043707 115 LIGSIVRKE---GHIYSLAA--SGDLLYTGSDSKNIRVWKNL-KEFSGFKSNSGLVKAIIITGDSN-KIFTGHQDGKIRI 187 (347)
Q Consensus 115 ~i~~l~~h~---~~V~~l~~--~~~~l~tg~~dg~I~vwd~~-~~~~~~~~h~~~V~~l~~sp~~~-~l~s~~~Dg~I~v 187 (347)
.+..+..|. ..|.++++ ++++|++|+.||.|++||.. +....+..|...|.+++|+|+++ +|++|+.|+.|++
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 344444443 67888876 57899999999999999964 45677889999999999999998 8999999999999
Q ss_pred EecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCC
Q 043707 188 WKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA-EQGLLYSGSWDKTLKVWRISD 266 (347)
Q Consensus 188 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~dg~i~vwdl~~ 266 (347)
||+++.+.... .....+|...|.+++|+| ++.+|++++.|+.|++||+++
T Consensus 232 wd~~~~~~~~~-----------------------------~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 232 WDLRNIKDKNS-----------------------------YIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp EEGGGCCSTTC-----------------------------EEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred EeCCCCCcccc-----------------------------eEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 99987542110 011124889999999999 999999999999999999998
Q ss_pred CEEEEEEecCC-----------------CcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhc--cCCcE
Q 043707 267 CKCLESINAHD-----------------DAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLK--QENAI 327 (347)
Q Consensus 267 ~~~~~~~~~h~-----------------~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~--h~~~V 327 (347)
++.+..+..|. ..+..++++|++.+ +++.|+.|++||+..+. ++..+.. |...+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~------~~~~l~~~~~~~~~ 355 (383)
T 3ei3_B 283 WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGG------LVHQLRDPNAAGII 355 (383)
T ss_dssp TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCC------EEEEECBTTBCSCC
T ss_pred CccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCc------eeeeecCCCCCceE
Confidence 88776666543 23444666777644 77899999999997544 3445554 56778
Q ss_pred EEEEEccCCCEEEEecCCC
Q 043707 328 TALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 328 ~~l~~~p~~~~l~sgs~DG 346 (347)
..++|+|++++|++|+ ||
T Consensus 356 ~~~~~s~~g~~l~s~s-d~ 373 (383)
T 3ei3_B 356 SLNKFSPTGDVLASGM-GF 373 (383)
T ss_dssp CEEEECTTSSEEEEEE-TT
T ss_pred EEEEEecCccEEEEec-CC
Confidence 8889999999999997 76
No 98
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=1.8e-24 Score=191.21 Aligned_cols=213 Identities=16% Similarity=0.263 Sum_probs=172.5
Q ss_pred CCCCCCCcccccc-------------cceeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCC---CcceeeecCCCC
Q 043707 100 PPYSPNENLLSSC-------------NGLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNL---KEFSGFKSNSGL 163 (347)
Q Consensus 100 ~~~~p~~~~~~~~-------------~~~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~---~~~~~~~~h~~~ 163 (347)
..|+|+++.++.. .+.+..+.+|...+.++.+.+.+|++|+.++.+++|+.. .....+.+|...
T Consensus 73 v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (318)
T 4ggc_A 73 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQE 152 (318)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC
T ss_pred EEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCc
Confidence 3688888776543 236788889999999999999999999999999999854 335677889999
Q ss_pred eeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEE
Q 043707 164 VKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSL 243 (347)
Q Consensus 164 V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~ 243 (347)
+..+++.+++++|++++.||.|++||+++++....... ....+...|.++.+
T Consensus 153 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----------------------------~~~~~~~~v~~~~~ 204 (318)
T 4ggc_A 153 VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ----------------------------TFTQHQGAVKAVAW 204 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSE----------------------------EECCCCSCEEEEEE
T ss_pred eEEEEEcCCCCEEEEEecCcceeEEECCCCccccccee----------------------------eecccCCceEEEEe
Confidence 99999999999999999999999999987753221111 11137788999999
Q ss_pred cCCCC-EE--EEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEE--EeCCCcEEEEEcccCCccceeeeh
Q 043707 244 NAEQG-LL--YSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFT--GSADGTVKVWRRELQGKGTKHFLA 317 (347)
Q Consensus 244 ~~~~~-~l--~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s--~~~dg~I~vwd~~~~~~~~~~~~~ 317 (347)
++++. .+ ++++.+++|++||.+......... +...+..+.|.+++ .+++ |+.|+.|++||++... ++
T Consensus 205 ~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~------~~ 277 (318)
T 4ggc_A 205 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA------KV 277 (318)
T ss_dssp CTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC------EE
T ss_pred cCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc------EE
Confidence 99754 33 456778999999999888776665 66678999998886 4443 4589999999998543 56
Q ss_pred hhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 318 QVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 318 ~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
..+.+|...|++|+|+|++++|++||.||+
T Consensus 278 ~~l~gH~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 278 AELKGHTSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTTE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEecCCe
Confidence 778899999999999999999999999984
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.93 E-value=2e-24 Score=208.09 Aligned_cols=219 Identities=12% Similarity=0.069 Sum_probs=167.5
Q ss_pred eccccEEEEe--ecCCEEEEecCCCcEEEEeCC------CcceeeecCCCC-eeEEEEeC--CCCEEEEEeCCCcEEEEe
Q 043707 121 RKEGHIYSLA--ASGDLLYTGSDSKNIRVWKNL------KEFSGFKSNSGL-VKAIIITG--DSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 121 ~h~~~V~~l~--~~~~~l~tg~~dg~I~vwd~~------~~~~~~~~h~~~-V~~l~~sp--~~~~l~s~~~Dg~I~vwd 189 (347)
.|.+.|.+++ +++++|++++ ++.|++|+.. +....+.+|.+. |.+++|+| ++++|++|+.||.|++||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 3556666655 5688999998 7899999965 456778899999 99999999 999999999999999999
Q ss_pred cCCC------CCceeeeec----------ccccccceEEeccCCC--eEEEEeecc--eeeeeecCCCeeEEEEcCCCC-
Q 043707 190 VSRK------NPSVHKRVG----------SLPTFKDYVKSSVNPK--NYVEVRRNR--NVLKIRHYDAVSCLSLNAEQG- 248 (347)
Q Consensus 190 ~~~~------~~~~~~~~~----------~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~h~~~V~~l~~~~~~~- 248 (347)
+.++ ......... ..+....++....+.. ..+.++... .....+|...|.+++|+|++.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~ 174 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM 174 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSC
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCc
Confidence 9754 111111111 1122222222222111 222222211 223346899999999999987
Q ss_pred EEEEEeCCCcEEEEeCCCCEEEEEEecCCC---cEEEEEeCCC-C-EEEEEeCCCcEEEEEcccCCccceeeehhhh-h-
Q 043707 249 LLYSGSWDKTLKVWRISDCKCLESINAHDD---AINSVVAGFD-S-LVFTGSADGTVKVWRRELQGKGTKHFLAQVL-L- 321 (347)
Q Consensus 249 ~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~---~v~~i~~~~~-~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~-~- 321 (347)
+|++++.|+.|++||+++++++..+..|.. .|.+++|+|+ + +|++++.||.|++||++... ....+ .
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~------~~~~~~~~ 248 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE------FLKYIEDD 248 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC------EEEECCBT
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC------EeEEeccc
Confidence 899999999999999999999999999999 9999999999 7 89999999999999997543 34444 4
Q ss_pred --ccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 322 --KQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 322 --~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
.|...|.+++|+ ++++|++++.||.
T Consensus 249 ~~~~~~~v~~~~~~-~~~~l~~~~~d~~ 275 (615)
T 1pgu_A 249 QEPVQGGIFALSWL-DSQKFATVGADAT 275 (615)
T ss_dssp TBCCCSCEEEEEES-SSSEEEEEETTSE
T ss_pred ccccCCceEEEEEc-CCCEEEEEcCCCc
Confidence 789999999999 9999999999873
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.93 E-value=1.9e-24 Score=193.98 Aligned_cols=194 Identities=13% Similarity=0.177 Sum_probs=154.5
Q ss_pred eEeeeeccccEEEEeec--CC-EEEEecC---CCcEEEEeCCCc--c-eeeecCCCCeeEEEEeCC---CCEEEEEeCCC
Q 043707 116 IGSIVRKEGHIYSLAAS--GD-LLYTGSD---SKNIRVWKNLKE--F-SGFKSNSGLVKAIIITGD---SNKIFTGHQDG 183 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~~--~~-~l~tg~~---dg~I~vwd~~~~--~-~~~~~h~~~V~~l~~sp~---~~~l~s~~~Dg 183 (347)
...+.+|.+.|.+++++ +. ++++|+. ||.|+|||.... . .....|...|.+++|+|+ +++|++|+.||
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 44557799999999986 43 6667776 999999996543 2 223378999999999998 69999999999
Q ss_pred cEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEE------EcCCCCEEEEEeCCC
Q 043707 184 KIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLS------LNAEQGLLYSGSWDK 257 (347)
Q Consensus 184 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~------~~~~~~~l~s~s~dg 257 (347)
.|++||+.+++..... ..+|...|.++. |++++.+|++++.||
T Consensus 91 ~i~iwd~~~~~~~~~~-------------------------------~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~ 139 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYS-------------------------------VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG 139 (357)
T ss_dssp CEEEECTTSCSSCSEE-------------------------------ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTS
T ss_pred eEEEEeCCCCCccEEE-------------------------------EEecccceEEEeeccccccCCCccEEEEEeCCC
Confidence 9999999987521111 114889999995 467899999999999
Q ss_pred cEEEEeCCCCE-EEEEEecCCC----cEEEEE----eCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcE
Q 043707 258 TLKVWRISDCK-CLESINAHDD----AINSVV----AGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAI 327 (347)
Q Consensus 258 ~i~vwdl~~~~-~~~~~~~h~~----~v~~i~----~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V 327 (347)
.|++||+++++ ++..+..|.. .+.++. |++++ +|++++.||.|++||++.... .....|...|
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-------~~~~~~~~~v 212 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-------RWETNIKNGV 212 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE-------EEEEECSSCE
T ss_pred eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce-------eeecCCCCce
Confidence 99999999887 7888876655 788998 67776 999999999999999985431 2335678899
Q ss_pred EEEEEcc---CCCEEEEecCCCC
Q 043707 328 TALAVNQ---ESAVVYCGSSDGL 347 (347)
Q Consensus 328 ~~l~~~p---~~~~l~sgs~DG~ 347 (347)
.+++|+| ++.+|++|+.||.
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~dg~ 235 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATSLEGK 235 (357)
T ss_dssp EEEEESCSSSSCCEEEEEESTTE
T ss_pred EEEEcCCCCCCCCEEEEECCCCe
Confidence 9999999 9999999999873
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.3e-25 Score=206.45 Aligned_cols=195 Identities=13% Similarity=0.226 Sum_probs=150.0
Q ss_pred ccccEEEEe----ecCCEEEEecCCCcEEEEeCC--Ccceeeec--CCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCC
Q 043707 122 KEGHIYSLA----ASGDLLYTGSDSKNIRVWKNL--KEFSGFKS--NSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 122 h~~~V~~l~----~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~--h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~ 193 (347)
+...+.++. .++.+|++|+.||.|++||.. +.+..+.. |.+.|.+++|+|++++|++|+.||.|++||++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 344555555 247799999999999999965 44667777 8899999999999999999999999999999876
Q ss_pred CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC----CCCEEEEEeCCCcEEEEeCCCCEE
Q 043707 194 NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA----EQGLLYSGSWDKTLKVWRISDCKC 269 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~----~~~~l~s~s~dg~i~vwdl~~~~~ 269 (347)
+....... .|...|.+++|+| ++.+|++|+.||+|++||++++++
T Consensus 247 ~~~~~~~~-------------------------------~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 247 VLIRSWSF-------------------------------GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp EEEEEEBC-------------------------------TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred cEEEEEec-------------------------------CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 43222111 3677899996665 577999999999999999999999
Q ss_pred EEEEecC--------------------------CCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceee--------
Q 043707 270 LESINAH--------------------------DDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHF-------- 315 (347)
Q Consensus 270 ~~~~~~h--------------------------~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~-------- 315 (347)
+..+.+| ...|.+++|+++.+|++|+.|+.|++||+..........
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 375 (437)
T 3gre_A 296 QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDV 375 (437)
T ss_dssp EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCE
T ss_pred EEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEecccccCce
Confidence 8888754 455788888844489999999999999997544210000
Q ss_pred -----------------------ehhhhhccCCcEEEEEEccC--CCEEEEecCCCC
Q 043707 316 -----------------------LAQVLLKQENAITALAVNQE--SAVVYCGSSDGL 347 (347)
Q Consensus 316 -----------------------~~~~~~~h~~~V~~l~~~p~--~~~l~sgs~DG~ 347 (347)
.......|...|++|+|+++ +.+|++|+.||+
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 376 FIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp EEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred EEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCce
Confidence 00112348999999999998 789999999985
No 102
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=4.4e-24 Score=198.50 Aligned_cols=220 Identities=20% Similarity=0.360 Sum_probs=164.0
Q ss_pred eeEeeeecccc-EEEEeecCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecC
Q 043707 115 LIGSIVRKEGH-IYSLAASGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 115 ~i~~l~~h~~~-V~~l~~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~ 191 (347)
....+.+|.+. +.|+.+++++|++|+.||+|++||.. +....+.+|.+.|.+++|++ +.|++|+.||+|++||+.
T Consensus 110 ~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD--NIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp CCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET--TEEEEEETTSCEEEEETT
T ss_pred eeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC--CEEEEEeCCCeEEEEECC
Confidence 46778899886 68999999999999999999999954 55778889999999999984 599999999999999998
Q ss_pred CCCCceeeeecc-----cccccc-eEEeccCCCeE-EEEeecce-eeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 043707 192 RKNPSVHKRVGS-----LPTFKD-YVKSSVNPKNY-VEVRRNRN-VLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWR 263 (347)
Q Consensus 192 ~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~-~~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwd 263 (347)
+++......... +..... ++....++... ++...... ....+|...|.+++| ++.+|++|+.||.|++||
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd 265 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWD 265 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEE
T ss_pred cCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEE
Confidence 875432221110 000011 22222222211 11122222 233468888888888 888888888899999999
Q ss_pred CCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 264 ISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 264 l~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
+++++++..+.+|...|.++.| ...++++++.||.|++||++.. .....+.+|...+.++.+ ++++|++|+
T Consensus 266 ~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~v~~~~~--~~~~l~~~~ 336 (445)
T 2ovr_B 266 PETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETG------NCIHTLTGHQSLTSGMEL--KDNILVSGN 336 (445)
T ss_dssp GGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTC------CEEEEECCCCSCEEEEEE--ETTEEEEEE
T ss_pred CCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCC------CEEEEEcCCcccEEEEEE--eCCEEEEEe
Confidence 8888888888888888888888 4348888888999999988743 377788888888887765 888888888
Q ss_pred CCCC
Q 043707 344 SDGL 347 (347)
Q Consensus 344 ~DG~ 347 (347)
.||.
T Consensus 337 ~dg~ 340 (445)
T 2ovr_B 337 ADST 340 (445)
T ss_dssp TTSC
T ss_pred CCCe
Confidence 8874
No 103
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=1.4e-24 Score=201.40 Aligned_cols=208 Identities=14% Similarity=0.189 Sum_probs=154.4
Q ss_pred eeeccccEEEEee--cCCEEEEecCCCcEEEEeCCCc---ce-------eeecCCCCeeEEEEeCCC-CEEEEEeCCCcE
Q 043707 119 IVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLKE---FS-------GFKSNSGLVKAIIITGDS-NKIFTGHQDGKI 185 (347)
Q Consensus 119 l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~---~~-------~~~~h~~~V~~l~~sp~~-~~l~s~~~Dg~I 185 (347)
+.+|.+.|.++++ ++++|++| .||.|++||.... .. .+.+|...|.+++|+|++ ++|++|+.||.|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 3679999999887 57799999 7999999997732 22 356899999999999998 999999999999
Q ss_pred EEEecCCCCCcee--eeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEe
Q 043707 186 RIWKVSRKNPSVH--KRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWR 263 (347)
Q Consensus 186 ~vwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwd 263 (347)
++||+++++.... ........ ........+|...|.+++|+|++.+|++++. +.|++||
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd 312 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPED------------------PSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWD 312 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----------------------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEE
T ss_pred EEEECcCCccccceeeEeccCCC------------------ccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEe
Confidence 9999998764110 00000000 0000011124459999999999999999998 9999999
Q ss_pred CCC-CEEEEEEecCCCc---------------EEEEEeCCCC-EEEEEeCCCcEEEEEcccCCcccee------------
Q 043707 264 ISD-CKCLESINAHDDA---------------INSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKH------------ 314 (347)
Q Consensus 264 l~~-~~~~~~~~~h~~~---------------v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~------------ 314 (347)
+++ ++++..+..|... +..++|+|++ +|++|+.||.|++||+.........
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 392 (447)
T 3dw8_B 313 LNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVL 392 (447)
T ss_dssp TTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBC
T ss_pred CCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeeccccccccccc
Confidence 997 8889999888642 2348999998 8999999999999999854321000
Q ss_pred --------------eehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 315 --------------FLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 315 --------------~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
........+...|..++|+|++.+||+++.|+
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 393 KPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp CCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred CCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce
Confidence 00001123456799999999999999999886
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.9e-24 Score=200.14 Aligned_cols=199 Identities=13% Similarity=0.143 Sum_probs=156.2
Q ss_pred eeeccccEEEEeec--CCEE-EEecCCCcEEEEeCC----Ccceeee--cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 119 IVRKEGHIYSLAAS--GDLL-YTGSDSKNIRVWKNL----KEFSGFK--SNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 119 l~~h~~~V~~l~~~--~~~l-~tg~~dg~I~vwd~~----~~~~~~~--~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
...|.+.|.+++++ +++| ++|+.||.|+|||.. +....+. .|...|.+++|+|++++|++|+.||.|++|+
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 45678889998874 6675 899999999999965 3445554 5678999999999999999999999999999
Q ss_pred cCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC---CCEEEEEeCCCcEEEEeCCC
Q 043707 190 VSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE---QGLLYSGSWDKTLKVWRISD 266 (347)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~---~~~l~s~s~dg~i~vwdl~~ 266 (347)
+.+.+.... . .....+|...|.+++|+|+ +.+|++++.|++|++||+++
T Consensus 178 ~~~~~~~~~-~---------------------------~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 178 INSIPEEKF-T---------------------------QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp TTSCCCSSC-C---------------------------CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred cCCcccccc-c---------------------------ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 987753320 0 0011258899999999999 99999999999999999999
Q ss_pred CEEEEE-EecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehh---hh----------------hccCC
Q 043707 267 CKCLES-INAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQ---VL----------------LKQEN 325 (347)
Q Consensus 267 ~~~~~~-~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~---~~----------------~~h~~ 325 (347)
++++.. +.+|...|.+++|+ ++ +|++++.|+.|++||++.+.......... .+ .....
T Consensus 230 ~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (450)
T 2vdu_B 230 CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEF 308 (450)
T ss_dssp TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCC
T ss_pred CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceE
Confidence 988877 55899999999999 76 99999999999999998654211111000 00 02345
Q ss_pred cEEEEEEccCCCEEEEec-CCC
Q 043707 326 AITALAVNQESAVVYCGS-SDG 346 (347)
Q Consensus 326 ~V~~l~~~p~~~~l~sgs-~DG 346 (347)
.|.+++|+|++++|++++ .||
T Consensus 309 ~v~~i~~~~~~~~l~~~~~~d~ 330 (450)
T 2vdu_B 309 AVSKIIKSKNLPFVAFFVEATK 330 (450)
T ss_dssp CEEEEEECSSSSEEEEEETTCS
T ss_pred EEEEEEEeCCCCEEEEEECCCC
Confidence 799999999999999998 665
No 105
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.93 E-value=2.7e-24 Score=223.72 Aligned_cols=208 Identities=15% Similarity=0.248 Sum_probs=160.6
Q ss_pred CCCCCCCCcccccc-------------cceeEeeeeccccEEEEeec----CCEEEEecCCCcEEEEeCC--Ccceeeec
Q 043707 99 MPPYSPNENLLSSC-------------NGLIGSIVRKEGHIYSLAAS----GDLLYTGSDSKNIRVWKNL--KEFSGFKS 159 (347)
Q Consensus 99 ~~~~~p~~~~~~~~-------------~~~i~~l~~h~~~V~~l~~~----~~~l~tg~~dg~I~vwd~~--~~~~~~~~ 159 (347)
...|+|++..++.. ...+..+.+|.+.|.++.+. +.++++|+.||.|++||.. +....+.+
T Consensus 662 ~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~ 741 (1249)
T 3sfz_A 662 CCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG 741 (1249)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC
T ss_pred EEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC
Confidence 34688888776543 23677888999999999984 3489999999999999965 44667889
Q ss_pred CCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec---------------------ccccccceEEeccCCC
Q 043707 160 NSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG---------------------SLPTFKDYVKSSVNPK 218 (347)
Q Consensus 160 h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~ 218 (347)
|.+.|.+++|+|++++|++|+.||.|++||+.+++........ ..+....++.......
T Consensus 742 h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v 821 (1249)
T 3sfz_A 742 HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKV 821 (1249)
T ss_dssp CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEE
T ss_pred CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcE
Confidence 9999999999999999999999999999999877543222111 1112222222221111
Q ss_pred eEEEEeeccee--eeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEe
Q 043707 219 NYVEVRRNRNV--LKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGS 295 (347)
Q Consensus 219 ~~~~~~~~~~~--~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~ 295 (347)
.++........ ...+|...|.+++|+|++.++++++.||.|++||+.+++.+..+.+|...|.+++|+|++ +|++++
T Consensus 822 ~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s 901 (1249)
T 3sfz_A 822 LLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS 901 (1249)
T ss_dssp EEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEe
Confidence 11111111211 223688999999999999999999999999999999999999999999999999999998 899999
Q ss_pred CCCcEEEEEcc
Q 043707 296 ADGTVKVWRRE 306 (347)
Q Consensus 296 ~dg~I~vwd~~ 306 (347)
.||.|++|++.
T Consensus 902 ~dg~v~vw~~~ 912 (1249)
T 3sfz_A 902 DDQTIRVWETK 912 (1249)
T ss_dssp TTSCEEEEEHH
T ss_pred CCCeEEEEEcc
Confidence 99999999975
No 106
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=4.7e-25 Score=204.69 Aligned_cols=189 Identities=16% Similarity=0.189 Sum_probs=144.6
Q ss_pred eEeeeeccccEEEEeec---CCEEEEecCCCcEEEEeCCCc-ceeee---cCCCCeeEEEEeCCCCEEEEEeCCCcEEEE
Q 043707 116 IGSIVRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNLKE-FSGFK---SNSGLVKAIIITGDSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~~~-~~~~~---~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vw 188 (347)
+..+.+|.+.|++++|+ +++|++|+.||+|++||+... ...+. .+...+.+++|+|++++|++|+.||.|++|
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 34456899999999974 679999999999999997643 23332 234568899999999999999999999999
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCC
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQG-LLYSGSWDKTLKVWRISDC 267 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~dg~i~vwdl~~~ 267 (347)
|++...... +.+|...|.+++|+|++. +|++|+.|++|+|||+++.
T Consensus 237 d~~~~~~~~---------------------------------~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 237 NMDGKELWN---------------------------------LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQV 283 (435)
T ss_dssp ESSSCBCCC---------------------------------SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTC
T ss_pred ccCcceeEE---------------------------------EecccceEEeeeecCCCceEEEEecCcceeeEEecccc
Confidence 997542111 114899999999999865 7889999999999999887
Q ss_pred EEEEE---EecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhcc------CCcEEEEEEccCCC
Q 043707 268 KCLES---INAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQ------ENAITALAVNQESA 337 (347)
Q Consensus 268 ~~~~~---~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h------~~~V~~l~~~p~~~ 337 (347)
+.... ..+|...|++++|+|++ +|++++.||.|+|||+..... ...+..| ...+..+.|+|++.
T Consensus 284 ~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (435)
T 4e54_B 284 RGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC------PLGLIPHPHRHFQHLTPIKAAWHPRYN 357 (435)
T ss_dssp CSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS------EEEECCCCCCCCSSSCCCBCEECSSSS
T ss_pred cccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc------ceEEecccccccccceeEEEEEcCCCC
Confidence 65433 35799999999999998 999999999999999985542 1111112 11234556777776
Q ss_pred EEEEec
Q 043707 338 VVYCGS 343 (347)
Q Consensus 338 ~l~sgs 343 (347)
++++++
T Consensus 358 ~~~~~~ 363 (435)
T 4e54_B 358 LIVVGR 363 (435)
T ss_dssp CEEEEC
T ss_pred EEEEEE
Confidence 666654
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=7.9e-25 Score=196.71 Aligned_cols=183 Identities=8% Similarity=-0.006 Sum_probs=141.3
Q ss_pred ecCCEEEEecCCCcEEEEeCCCc--ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeeccccccc
Q 043707 131 ASGDLLYTGSDSKNIRVWKNLKE--FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFK 208 (347)
Q Consensus 131 ~~~~~l~tg~~dg~I~vwd~~~~--~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~ 208 (347)
.++++|++|+.||.|++||.... +..+. ...|.++.|+|+ +++++.|++|++|+........ ...
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~--~~~------ 112 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITIL--DSK------ 112 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEE--ETT------
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEe--ecC------
Confidence 46779999999999999996533 33343 467888889888 9999999999999887421000 000
Q ss_pred ceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCEEEEEEe-cCCCcEEEEEe
Q 043707 209 DYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA--EQGLLYSGSWDKTLKVWRISDCKCLESIN-AHDDAINSVVA 285 (347)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~--~~~~l~s~s~dg~i~vwdl~~~~~~~~~~-~h~~~v~~i~~ 285 (347)
.... ......+|...|.+++|+| ++.+|++++.||+|++||+++++++..+. .|...|.+++|
T Consensus 113 --------~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~ 178 (343)
T 3lrv_A 113 --------TNKV------LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVL 178 (343)
T ss_dssp --------TCCE------EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEE
T ss_pred --------Ccce------eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEE
Confidence 0000 0011224778899999999 99999999999999999999999877764 45568999999
Q ss_pred CCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhc-cCCcEEEEEEccCCCEEEEecCC
Q 043707 286 GFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLK-QENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 286 ~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
+|++ +|++|+.||.|++||++.... ....+.. |...|++|+|+|++.+|++++.|
T Consensus 179 ~pdg~~lasg~~dg~i~iwd~~~~~~-----~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~ 235 (343)
T 3lrv_A 179 HKDSLLLALYSPDGILDVYNLSSPDQ-----ASSRFPVDEEAKIKEVKFADNGYWMVVECDQ 235 (343)
T ss_dssp CTTSCEEEEECTTSCEEEEESSCTTS-----CCEECCCCTTSCEEEEEECTTSSEEEEEESS
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCCC-----CccEEeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 9998 888999999999999986543 2244555 99999999999999999999954
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=2.5e-24 Score=195.30 Aligned_cols=177 Identities=16% Similarity=0.155 Sum_probs=139.1
Q ss_pred CCCCCCccccccc----c-----------eeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCC-Cc---ceeeec
Q 043707 101 PYSPNENLLSSCN----G-----------LIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL-KE---FSGFKS 159 (347)
Q Consensus 101 ~~~p~~~~~~~~~----~-----------~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~-~~---~~~~~~ 159 (347)
.|+|+|+.++... + .+..+ .|.+.|+++++ +|++|++++.++ +++|+.. .. ......
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~ 217 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFD 217 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCC
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCC
Confidence 5889998764221 1 33334 57788988886 578999998665 5555533 22 224456
Q ss_pred CCCCeeEEEEeCCCCEEEEEeCCC----cEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecC
Q 043707 160 NSGLVKAIIITGDSNKIFTGHQDG----KIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHY 235 (347)
Q Consensus 160 h~~~V~~l~~sp~~~~l~s~~~Dg----~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 235 (347)
|...|.+++|+|+++++++++.|+ .+++|++......... .....+|.
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~----------------------------~~~~~~~~ 269 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLR----------------------------SKQVTNRF 269 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEE----------------------------EEEEESSC
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceeccee----------------------------eeeecCCC
Confidence 888999999999999999999887 6888888765321111 11223588
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEE-ecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEccc
Q 043707 236 DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESI-NAHDDAINSVVAGFDS-LVFTGSADGTVKVWRREL 307 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~-~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~ 307 (347)
..|++++|+|++++|++|+.|++|+|||+++++++..+ ++|...|++|+|+||+ +|++|+.|++|+|||+..
T Consensus 270 ~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999999999999999999999999999999886 7899999999999998 999999999999999963
No 109
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.3e-24 Score=216.83 Aligned_cols=204 Identities=14% Similarity=0.112 Sum_probs=150.8
Q ss_pred ccccEEEEee------------cCCEEEEecCCCcEEEEeCCCc--c-------ee------------------------
Q 043707 122 KEGHIYSLAA------------SGDLLYTGSDSKNIRVWKNLKE--F-------SG------------------------ 156 (347)
Q Consensus 122 h~~~V~~l~~------------~~~~l~tg~~dg~I~vwd~~~~--~-------~~------------------------ 156 (347)
|.+.|.++.+ ++..+++++.||.|++|+.... . ..
T Consensus 341 ~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~ 420 (902)
T 2oaj_A 341 TNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGA 420 (902)
T ss_dssp SSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHH
T ss_pred CCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHH
Confidence 4566766653 2337888999999999996321 1 01
Q ss_pred ----------eecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeec
Q 043707 157 ----------FKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRN 226 (347)
Q Consensus 157 ----------~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (347)
+.+|...+..++|+|+++.|++|+.||+||+||+.++......... ...
T Consensus 421 ~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~--------------------~~l- 479 (902)
T 2oaj_A 421 LSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFE--------------------VNL- 479 (902)
T ss_dssp HHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEE--------------------EEH-
T ss_pred HhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEE--------------------eec-
Confidence 2334445555666788999999999999999999887421100000 000
Q ss_pred ceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCC---------------------------------------
Q 043707 227 RNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDC--------------------------------------- 267 (347)
Q Consensus 227 ~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~--------------------------------------- 267 (347)
.+....+|...|.+++|+|++++|++|+.||+|+|||+.++
T Consensus 480 ~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 559 (902)
T 2oaj_A 480 SRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPT 559 (902)
T ss_dssp HHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCT
T ss_pred hhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCC
Confidence 00001158899999999999999999999999999999765
Q ss_pred ------EEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhh-ccCCcEEEEEEc-----cC
Q 043707 268 ------KCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLL-KQENAITALAVN-----QE 335 (347)
Q Consensus 268 ------~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~-~h~~~V~~l~~~-----p~ 335 (347)
+++..+.+|.+.|++|+|+|+|+||+|+.|++|+|||++....... .....+. +|...|++|+|+ ||
T Consensus 560 ~~~~g~~~~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~~~~~-~~~~~~~~gh~~~V~sv~Fs~~~~~~D 638 (902)
T 2oaj_A 560 GVRQGFMPSTAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPAIIYM-ENIREISGAQSACVTCIEFVIMEYGDD 638 (902)
T ss_dssp TCSEEEEEEEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTEEEEE-EEGGGTCSSCCCCEEEEEEEEEECTTS
T ss_pred CCCCccceeEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCeEEEE-eehhHhccccccceEEEEEEEEecCCC
Confidence 3577888999999999999999999999999999999864321000 1124554 899999999999 88
Q ss_pred C---CEEEEecCCCC
Q 043707 336 S---AVVYCGSSDGL 347 (347)
Q Consensus 336 ~---~~l~sgs~DG~ 347 (347)
| ++|++|+.||+
T Consensus 639 g~~~~~l~sgs~D~t 653 (902)
T 2oaj_A 639 GYSSILMVCGTDMGE 653 (902)
T ss_dssp SSEEEEEEEEETTSE
T ss_pred CCcceEEEEEecCCc
Confidence 5 89999999984
No 110
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.1e-24 Score=200.21 Aligned_cols=199 Identities=11% Similarity=0.086 Sum_probs=149.6
Q ss_pred CCCCCCCcccccccc--------eeEeeeeccccEEEEeecCCEEEEecCCCcEEEEeCCCcceeee-cCCCCeeEEEEe
Q 043707 100 PPYSPNENLLSSCNG--------LIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLKEFSGFK-SNSGLVKAIIIT 170 (347)
Q Consensus 100 ~~~~p~~~~~~~~~~--------~i~~l~~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~~~~~~~~~-~h~~~V~~l~~s 170 (347)
..|+|+|..+++... ....+.+|...|++++++++- .++.+.+|+..... .+. .|...|.+++|+
T Consensus 21 v~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg-----~~~~~~~~~~~~~~-~~~~~~~~~V~~vawS 94 (588)
T 2j04_A 21 LTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE-----FENKLDFELAQQNG-LLNSQPVCYPRVCKPS 94 (588)
T ss_dssp EEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC-----CCCTTTTSCCCSSC-SSTTSCSCCEEEEEEC
T ss_pred EEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCC-----CcceEEEEeCCCce-EeecCCCCcEEEEEEC
Confidence 368899988765422 223347899999988875432 46666666543222 222 457899999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecC-----CCeeEEEEcC
Q 043707 171 GDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHY-----DAVSCLSLNA 245 (347)
Q Consensus 171 p~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~V~~l~~~~ 245 (347)
|+|++|++++.||.|++||... .. ... .|. ..|.+++|+|
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~---~l-~~l-------------------------------~~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNK---ML-TNL-------------------------------DSKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTE---EE-EEC-------------------------------CCSSCSTTTCEEEEEECS
T ss_pred CCCCEEEEEeCCCcEEEEeCCc---ee-eec-------------------------------cCCCccccccEEEEEEcC
Confidence 9999999999999999999543 00 000 122 3599999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCE-------EEEEE----ecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCcccee
Q 043707 246 EQGLLYSGSWDKTLKVWRISDCK-------CLESI----NAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKH 314 (347)
Q Consensus 246 ~~~~l~s~s~dg~i~vwdl~~~~-------~~~~~----~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~ 314 (347)
+|++|++|+.||+|+|||+.+++ .+.++ .+|...|.+++|+|++ +++++.|+.|++||+..... .
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~---~ 215 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSH---Q 215 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSS---C
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCcc---c
Confidence 99999999999999999999875 36777 5677899999999999 99999999999999974431 0
Q ss_pred eehhhh-hccCCcEEEEEEccCCCEEEEecCCC
Q 043707 315 FLAQVL-LKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 315 ~~~~~~-~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
...+.+ .+|...|.+++|+ ++.||+++ ||
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~ 245 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--DYKVVLTC-PG 245 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS
T ss_pred cceeeecccccCcEEEEEEE--CCEEEEEe-CC
Confidence 012334 3688899999999 68999987 44
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.3e-22 Score=189.02 Aligned_cols=208 Identities=13% Similarity=0.113 Sum_probs=161.3
Q ss_pred CCCCCCCccc-ccc---------------cceeEeee--eccccEEEEee--cCCEEEEecCCCcEEEEeCCC------c
Q 043707 100 PPYSPNENLL-SSC---------------NGLIGSIV--RKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK------E 153 (347)
Q Consensus 100 ~~~~p~~~~~-~~~---------------~~~i~~l~--~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~------~ 153 (347)
..|+|++..+ +.. .+.+..+. .|...|.++++ ++++|++|+.||.|++|+... .
T Consensus 108 ~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 108 LRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccccc
Confidence 3577888764 322 12344444 45678888887 477999999999999998542 2
Q ss_pred ceeeecCCCCeeEEEEeCC---CCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceee
Q 043707 154 FSGFKSNSGLVKAIIITGD---SNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVL 230 (347)
Q Consensus 154 ~~~~~~h~~~V~~l~~sp~---~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (347)
...+.+|...|.+++|+|+ +++|++|+.|++|++||+.+++......
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~------------------------------ 237 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL------------------------------ 237 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC------------------------------
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee------------------------------
Confidence 3367889999999999999 9999999999999999998775432211
Q ss_pred eeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecC-------------------------CCcEEEEEe
Q 043707 231 KIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAH-------------------------DDAINSVVA 285 (347)
Q Consensus 231 ~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h-------------------------~~~v~~i~~ 285 (347)
.+|...|.+++|+ ++.+|++++.|++|++||+++++++..+..+ ...|..++|
T Consensus 238 -~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 238 -FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp -CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred -cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 1489999999999 9999999999999999999999999888633 356899999
Q ss_pred CCCC-EEEEEe-CCCcEEEEEc--ccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 286 GFDS-LVFTGS-ADGTVKVWRR--ELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 286 ~~~~-~l~s~~-~dg~I~vwd~--~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
+|++ +|++++ .|+.|++|++ .... .......+..| ..|.+++|+|++.++++++
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~---~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQKG---DLALKQIITFP-YNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSSTT---CEEEEEEEECS-SCEEEEEEETTEEEEEECC
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCCCC---ceeeccEeccC-CceEEEEecCCcEEEEEec
Confidence 9987 787777 8999999999 3221 22345556666 7899999999654444444
No 112
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=5.9e-23 Score=183.14 Aligned_cols=161 Identities=22% Similarity=0.358 Sum_probs=121.2
Q ss_pred ceeeecCCCCeeEEEEeCC-CCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeee
Q 043707 154 FSGFKSNSGLVKAIIITGD-SNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKI 232 (347)
Q Consensus 154 ~~~~~~h~~~V~~l~~sp~-~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (347)
..++++|.+.|++|+|+|+ +++|+||+.||+|+|||+...+....... ..+.
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~---------------------------~~l~ 83 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQ---------------------------RALR 83 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEE---------------------------EEEC
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceee---------------------------EEEe
Confidence 3468899999999999996 68999999999999999987653222111 1123
Q ss_pred ecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCC-----------------------------------
Q 043707 233 RHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHD----------------------------------- 277 (347)
Q Consensus 233 ~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~----------------------------------- 277 (347)
+|...|.+++|+|++.+|++++.|+.|++|+............+.
T Consensus 84 ~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~ 163 (340)
T 4aow_A 84 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY 163 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceE
Confidence 599999999999999999999999999999998766554444433
Q ss_pred --------CcEEEEEeCCCC---EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 278 --------DAINSVVAGFDS---LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 278 --------~~v~~i~~~~~~---~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
..+..++|++++ ++++++.|+.|++||++.. .+...+.+|...|++|+|+|++++|++|+.||
T Consensus 164 ~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~------~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 164 TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC------KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC------ceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 444555554442 4555555556666655432 23455678999999999999999999999998
Q ss_pred C
Q 043707 347 L 347 (347)
Q Consensus 347 ~ 347 (347)
+
T Consensus 238 ~ 238 (340)
T 4aow_A 238 Q 238 (340)
T ss_dssp E
T ss_pred e
Confidence 4
No 113
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=3.2e-23 Score=182.23 Aligned_cols=162 Identities=10% Similarity=0.004 Sum_probs=119.4
Q ss_pred eeEeeeecccc--EEEEee---cCCEEEEecCCCcEEEEeCC--CcceeeecCC---CCeeEEEEeCCCCEE--------
Q 043707 115 LIGSIVRKEGH--IYSLAA---SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNS---GLVKAIIITGDSNKI-------- 176 (347)
Q Consensus 115 ~i~~l~~h~~~--V~~l~~---~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~---~~V~~l~~sp~~~~l-------- 176 (347)
.+..+..|... +.++++ ++++|++|+.|++|+|||.. +.++.+.+|. ..|.+++|+|++.++
T Consensus 170 ~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~ 249 (356)
T 2w18_A 170 GKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCA 249 (356)
T ss_dssp EEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----
T ss_pred eeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCC
Confidence 35565666654 556666 56899999999999999965 5567777653 467888999999876
Q ss_pred ----EEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEE
Q 043707 177 ----FTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYS 252 (347)
Q Consensus 177 ----~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s 252 (347)
++|+.|++|++||..+++......... + .+|...+.+..+ ++.++++
T Consensus 250 ~w~laSGs~D~tIklWd~~tgk~l~v~~~~~-p--------------------------~Gh~~~~lsg~~--sg~~lAS 300 (356)
T 2w18_A 250 KESESLRSPVFQLIVINPKTTLSVGVMLYCL-P--------------------------PGQAGRFLEGDV--KDHCAAA 300 (356)
T ss_dssp --------CCEEEEEEETTTTEEEEEEEECC-C--------------------------TTCCCCEEEEEE--ETTEEEE
T ss_pred cceeeccCCCcEEEEEECCCCEEEEEEEeec-c--------------------------CCCcceeEcccc--CCCEEEE
Confidence 568899999999998875432211110 1 034444444444 3789999
Q ss_pred EeCCCcEEEEeCCCCEEEEEEecCCCcEE-EEEeCCCC-EEEEEeCCCcEEEEEc
Q 043707 253 GSWDKTLKVWRISDCKCLESINAHDDAIN-SVVAGFDS-LVFTGSADGTVKVWRR 305 (347)
Q Consensus 253 ~s~dg~i~vwdl~~~~~~~~~~~h~~~v~-~i~~~~~~-~l~s~~~dg~I~vwd~ 305 (347)
++.|++|+|||+.+++++.++++|...+. +++|+|++ +|++|+.|++|+|||+
T Consensus 301 gS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 301 ILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 99999999999999999999999987655 58999998 8999999999999996
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=6e-24 Score=194.72 Aligned_cols=147 Identities=13% Similarity=0.162 Sum_probs=115.4
Q ss_pred ecCCEEEEecCCCcEEEEeCCCc-------ceeeecCCCCeeEEEEeC--------CCCEEEEEeCCCcEEEEecCCCCC
Q 043707 131 ASGDLLYTGSDSKNIRVWKNLKE-------FSGFKSNSGLVKAIIITG--------DSNKIFTGHQDGKIRIWKVSRKNP 195 (347)
Q Consensus 131 ~~~~~l~tg~~dg~I~vwd~~~~-------~~~~~~h~~~V~~l~~sp--------~~~~l~s~~~Dg~I~vwd~~~~~~ 195 (347)
+.+.+|++|+.|++|+|||.... +..+.+|.+.|.+++|+| ++++|++|+.|++|+|||++++..
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 34668999999999999985422 345778999999999998 788999999999999999987642
Q ss_pred ceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCEEEEEE-
Q 043707 196 SVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ-GLLYSGSWDKTLKVWRISDCKCLESI- 273 (347)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~s~s~dg~i~vwdl~~~~~~~~~- 273 (347)
... ...|...|.+++|+|++ .+|++++.|++|++||+++++.....
T Consensus 179 ~~~--------------------------------~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~ 226 (393)
T 4gq1_A 179 ILA--------------------------------GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENS 226 (393)
T ss_dssp EEE--------------------------------EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC------
T ss_pred eee--------------------------------ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccccc
Confidence 211 22588999999999986 58999999999999999887643322
Q ss_pred ------------------------ecCCCcEEEEEeC-CCC-EEEEEeCCCcEEEEEcccCC
Q 043707 274 ------------------------NAHDDAINSVVAG-FDS-LVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 274 ------------------------~~h~~~v~~i~~~-~~~-~l~s~~~dg~I~vwd~~~~~ 309 (347)
.+|...+.++.|. +++ .|++++.|+++++||+....
T Consensus 227 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 227 QTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp ----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred ccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 3567788889886 676 89999999999999997543
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.8e-22 Score=199.74 Aligned_cols=193 Identities=16% Similarity=0.268 Sum_probs=148.4
Q ss_pred eeEeeeeccccEEEEeec----CCEEEEecCCCcEEEEeCCC----cceeeecCCCCeeEEEEeCC--CCEEEEEeCCCc
Q 043707 115 LIGSIVRKEGHIYSLAAS----GDLLYTGSDSKNIRVWKNLK----EFSGFKSNSGLVKAIIITGD--SNKIFTGHQDGK 184 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~----~~~l~tg~~dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp~--~~~l~s~~~Dg~ 184 (347)
.+..+.+|.+.|+++.++ +++|++|+.||.|++||... ....+..|...|.+++|+|+ +++|++|+.||.
T Consensus 45 ~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~ 124 (753)
T 3jro_A 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGK 124 (753)
T ss_dssp EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCc
Confidence 566788899999999975 78999999999999999543 45667789999999999998 999999999999
Q ss_pred EEEEecCCCCCceeeee----------ccccc-------------ccceEEeccCCCe-EEEEeecc-----eeeeeecC
Q 043707 185 IRIWKVSRKNPSVHKRV----------GSLPT-------------FKDYVKSSVNPKN-YVEVRRNR-----NVLKIRHY 235 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~----------~~~~~-------------~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~h~ 235 (347)
|++||++.+........ ...+. ...++....++.. +++..... .....+|.
T Consensus 125 I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~ 204 (753)
T 3jro_A 125 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (753)
T ss_dssp EEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC
Confidence 99999988743222111 11221 2233333333332 23333221 12334689
Q ss_pred CCeeEEEEcCC---CCEEEEEeCCCcEEEEeCCCCE-----EEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcc
Q 043707 236 DAVSCLSLNAE---QGLLYSGSWDKTLKVWRISDCK-----CLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRE 306 (347)
Q Consensus 236 ~~V~~l~~~~~---~~~l~s~s~dg~i~vwdl~~~~-----~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~ 306 (347)
..|.+++|+|+ +.+|++++.||+|++||+++++ .+.....|...|.+++|+|++ +|++|+.||.|++|++.
T Consensus 205 ~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 205 DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 99999999999 8999999999999999998864 333345688899999999998 89999999999999997
Q ss_pred c
Q 043707 307 L 307 (347)
Q Consensus 307 ~ 307 (347)
.
T Consensus 285 ~ 285 (753)
T 3jro_A 285 L 285 (753)
T ss_dssp S
T ss_pred C
Confidence 4
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.89 E-value=3.1e-21 Score=178.07 Aligned_cols=187 Identities=19% Similarity=0.270 Sum_probs=152.3
Q ss_pred eeccccEEEEeec--CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCC
Q 043707 120 VRKEGHIYSLAAS--GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNP 195 (347)
Q Consensus 120 ~~h~~~V~~l~~~--~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~ 195 (347)
.+|...|++++|+ |++|++|+.||.|+|||.. +.+..+.+|...|.++.+++ ..|++|+.|+.+++||......
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~--~~l~sgs~d~~i~~~d~~~~~~ 221 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS--YILSSGSRSGHIHHHDVRVAEH 221 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEETTSSSC
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC--CEEEEEeCCCceeEeeecccce
Confidence 4577789999974 7899999999999999965 45778889999999998865 5999999999999999987643
Q ss_pred ceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE----EEE
Q 043707 196 SVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK----CLE 271 (347)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~----~~~ 271 (347)
.... ..+|...+.++.|++++.++++++.|+.+++||+.+++ .+.
T Consensus 222 ~~~~-------------------------------~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~ 270 (420)
T 4gga_A 222 HVAT-------------------------------LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQ 270 (420)
T ss_dssp EEEE-------------------------------EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSE
T ss_pred eeEE-------------------------------ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeee
Confidence 2221 12589999999999999999999999999999998764 456
Q ss_pred EEecCCCcEEEEEeCCCC--EEEE--EeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec--CC
Q 043707 272 SINAHDDAINSVVAGFDS--LVFT--GSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS--SD 345 (347)
Q Consensus 272 ~~~~h~~~v~~i~~~~~~--~l~s--~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs--~D 345 (347)
....|...|.+++|+|.+ ++++ |+.|++|++||+..+. +...+. +...|.++.|+++++.|++++ .|
T Consensus 271 ~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~------~~~~~~-~~~~v~~~~~~~~~~~lv~~sg~~d 343 (420)
T 4gga_A 271 TFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA------CLSAVD-AHSQVCSILWSPHYKELISGHGFAQ 343 (420)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE------EEEEEE-CSSCEEEEEEETTTTEEEEEECTTT
T ss_pred eecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc------cceeec-cccceeeeeecCCCCeEEEEEecCC
Confidence 778899999999999975 5554 4579999999998543 233333 345899999999999888764 56
Q ss_pred C
Q 043707 346 G 346 (347)
Q Consensus 346 G 346 (347)
|
T Consensus 344 ~ 344 (420)
T 4gga_A 344 N 344 (420)
T ss_dssp C
T ss_pred C
Confidence 5
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=2.7e-21 Score=170.72 Aligned_cols=212 Identities=12% Similarity=0.173 Sum_probs=150.6
Q ss_pred EEEeecC-CEEEEecCCCcEEEEeCC--Ccceee--ecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeee
Q 043707 127 YSLAASG-DLLYTGSDSKNIRVWKNL--KEFSGF--KSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRV 201 (347)
Q Consensus 127 ~~l~~~~-~~l~tg~~dg~I~vwd~~--~~~~~~--~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~ 201 (347)
.+|+|+. ++|++| .|++|+|||.. +..+.+ .+|...|.+++|+|++++|++|+.||+|++||+++++.......
T Consensus 29 ~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence 4566753 466665 58999999965 334444 46778899999999999999999999999999998865433221
Q ss_pred ccc-----ccccceEEeccCCCeEEEEee----cceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE----
Q 043707 202 GSL-----PTFKDYVKSSVNPKNYVEVRR----NRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK---- 268 (347)
Q Consensus 202 ~~~-----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~---- 268 (347)
... .....++.............. .......+|...+.++.+.+++.+|++++.|++|++||+++++
T Consensus 108 h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 187 (318)
T 4ggc_A 108 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 187 (318)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSC
T ss_pred ccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccccc
Confidence 111 111122222222222222211 1123345799999999999999999999999999999998764
Q ss_pred EEEEEecCCCcEEEEEeCCCC----EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec-
Q 043707 269 CLESINAHDDAINSVVAGFDS----LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS- 343 (347)
Q Consensus 269 ~~~~~~~h~~~v~~i~~~~~~----~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs- 343 (347)
.......|...|.++.+.+++ .+++++.++.|++||.+.... .....+...+..++|+|++..+++++
T Consensus 188 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 188 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-------LSAVDAHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp CSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE-------EEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred ceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc-------cccccceeeeeeeeecccccceEEEEE
Confidence 345566788899999999875 345677899999999975432 22345677899999999998887654
Q ss_pred -CCC
Q 043707 344 -SDG 346 (347)
Q Consensus 344 -~DG 346 (347)
.||
T Consensus 261 ~~d~ 264 (318)
T 4ggc_A 261 FAQN 264 (318)
T ss_dssp TTTC
T ss_pred cCCC
Confidence 566
No 118
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.89 E-value=3e-21 Score=176.14 Aligned_cols=205 Identities=14% Similarity=0.172 Sum_probs=153.7
Q ss_pred CcEEEEe--CCCcceeeecCCCCeeEEEEeC-CCCEEEEEeCCCcEEEEecCCCCCceeeee------------------
Q 043707 143 KNIRVWK--NLKEFSGFKSNSGLVKAIIITG-DSNKIFTGHQDGKIRIWKVSRKNPSVHKRV------------------ 201 (347)
Q Consensus 143 g~I~vwd--~~~~~~~~~~h~~~V~~l~~sp-~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~------------------ 201 (347)
+.+++|+ ..+....+.+|.+.|.+++|+| ++++|++|+.||.|++||+.++........
T Consensus 23 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 102 (408)
T 4a11_B 23 STRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSV 102 (408)
T ss_dssp HHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCE
T ss_pred CcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcE
Confidence 4456665 4456677888999999999999 999999999999999999998764332221
Q ss_pred ---ccccccc-ceEEeccCCC-eEEEEeecceeeeeecCCCeeEEEEcCC---CCEEEEEeCCCcEEEEeCCCCEEEEEE
Q 043707 202 ---GSLPTFK-DYVKSSVNPK-NYVEVRRNRNVLKIRHYDAVSCLSLNAE---QGLLYSGSWDKTLKVWRISDCKCLESI 273 (347)
Q Consensus 202 ---~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~V~~l~~~~~---~~~l~s~s~dg~i~vwdl~~~~~~~~~ 273 (347)
...+... .++....+.. .++++..........+...+.++.+++. +.++++++.|+.|++||+++++++..+
T Consensus 103 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 182 (408)
T 4a11_B 103 ETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL 182 (408)
T ss_dssp EEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE
T ss_pred EEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee
Confidence 1112111 1222222222 1222233344455668889999999984 459999999999999999999999999
Q ss_pred ecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccc----------eeeehhhhhccCCcEEEEEEccCCCEEEE
Q 043707 274 NAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGT----------KHFLAQVLLKQENAITALAVNQESAVVYC 341 (347)
Q Consensus 274 ~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~----------~~~~~~~~~~h~~~V~~l~~~p~~~~l~s 341 (347)
..|...|.+++|+|++ +|++++.||.|++||++...... ..........|...|++++|+|++++|++
T Consensus 183 ~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 183 QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE
T ss_pred cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEE
Confidence 9999999999999987 68999999999999997554210 11123334678899999999999999999
Q ss_pred ecCCCC
Q 043707 342 GSSDGL 347 (347)
Q Consensus 342 gs~DG~ 347 (347)
++.||.
T Consensus 263 ~~~dg~ 268 (408)
T 4a11_B 263 VGTDNR 268 (408)
T ss_dssp EETTSC
T ss_pred ecCCCe
Confidence 999984
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.89 E-value=1.9e-21 Score=174.83 Aligned_cols=190 Identities=15% Similarity=0.198 Sum_probs=141.8
Q ss_pred EeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCCc-ceeeecCCCCeeEEEE--eCCCCEEEEEeCCCcEEEEecC
Q 043707 117 GSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLKE-FSGFKSNSGLVKAIII--TGDSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 117 ~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~-~~~~~~h~~~V~~l~~--sp~~~~l~s~~~Dg~I~vwd~~ 191 (347)
..+.+|.+.|.++.+ ++++|++|+.||.|++||.... ...+..|...|.+++| +|++++|++++.||.|++||++
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 678889999999987 4779999999999999996533 4456789999999999 8899999999999999999999
Q ss_pred CCCCceeeeecccc---------------------------------------ccc-------------c-eEEeccCCC
Q 043707 192 RKNPSVHKRVGSLP---------------------------------------TFK-------------D-YVKSSVNPK 218 (347)
Q Consensus 192 ~~~~~~~~~~~~~~---------------------------------------~~~-------------~-~~~~~~~~~ 218 (347)
+++........... ... . ++....+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 239 (368)
T 3mmy_A 160 SSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR 239 (368)
T ss_dssp CSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE
T ss_pred CCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc
Confidence 87654332211100 000 0 111111111
Q ss_pred eEEEE-eec----ceeeeeecCC------------CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEE
Q 043707 219 NYVEV-RRN----RNVLKIRHYD------------AVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAIN 281 (347)
Q Consensus 219 ~~~~~-~~~----~~~~~~~h~~------------~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~ 281 (347)
..+.. ... .......|.. .|.+++|+|++.+|++++.||.|++||+++++++..+..|...|.
T Consensus 240 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 319 (368)
T 3mmy_A 240 VAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIS 319 (368)
T ss_dssp EEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEE
T ss_pred EEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCce
Confidence 11111 111 1112223433 799999999999999999999999999999999999999999999
Q ss_pred EEEeCCCC-EEEEEeCCCcEEEEEcc
Q 043707 282 SVVAGFDS-LVFTGSADGTVKVWRRE 306 (347)
Q Consensus 282 ~i~~~~~~-~l~s~~~dg~I~vwd~~ 306 (347)
+++|+|++ +|++++.|+..+.|++.
T Consensus 320 ~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 320 ACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEEECCCCCeEEEEeccccccccccc
Confidence 99999998 89999998866666654
No 120
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.4e-21 Score=170.36 Aligned_cols=159 Identities=13% Similarity=0.142 Sum_probs=138.9
Q ss_pred eEeeeeccc--cEEEEee--cCCEEEEecCCCcEEEEeCCC---cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEE
Q 043707 116 IGSIVRKEG--HIYSLAA--SGDLLYTGSDSKNIRVWKNLK---EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 116 i~~l~~h~~--~V~~l~~--~~~~l~tg~~dg~I~vwd~~~---~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vw 188 (347)
+..+..|.+ .+.++.+ ++++|++|+.||.|++||... ....+..|...|.+++|+|++++|++++.||.|++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLV 245 (369)
T ss_dssp SEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEE
Confidence 444555655 7888776 578999999999999999754 466788899999999999999999999999999999
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCC-----------
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDK----------- 257 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg----------- 257 (347)
|+++++..... .+...+.+++|+|++.++++++.++
T Consensus 246 d~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (369)
T 3zwl_B 246 DVSTLQVLKKY---------------------------------ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANE 292 (369)
T ss_dssp ETTTCCEEEEE---------------------------------ECSSCEEEEEECSSSSEEEEEECCC-----------
T ss_pred ECCCCceeeee---------------------------------cCCCCceeEEecCCCceEEEeecCCCceEEEEecCC
Confidence 99877532221 2678899999999999999999988
Q ss_pred ---cEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEccc
Q 043707 258 ---TLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRREL 307 (347)
Q Consensus 258 ---~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~ 307 (347)
.+++||+.+++++..+.+|...|.+++|+|++ +|++++.||.|++|+++.
T Consensus 293 ~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 293 GKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp --CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred CcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 89999999999999999999999999999997 999999999999999974
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.88 E-value=5.9e-21 Score=176.81 Aligned_cols=161 Identities=17% Similarity=0.279 Sum_probs=136.3
Q ss_pred eEeeeeccccEEEEeec---CCEEEEecCCCcEEEEeCC-----CcceeeecCCCCeeEEEEeCCCC-EEEEEeCCCcEE
Q 043707 116 IGSIVRKEGHIYSLAAS---GDLLYTGSDSKNIRVWKNL-----KEFSGFKSNSGLVKAIIITGDSN-KIFTGHQDGKIR 186 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~~---~~~l~tg~~dg~I~vwd~~-----~~~~~~~~h~~~V~~l~~sp~~~-~l~s~~~Dg~I~ 186 (347)
...+.+|.+.|.++.++ +.+|++++.||.|++||.. +....+..|...|.+++|+|++. .|++|+.||.|+
T Consensus 224 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~ 303 (430)
T 2xyi_A 224 KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA 303 (430)
T ss_dssp SEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEE
Confidence 45566899999999984 5699999999999999965 34566778999999999999887 688999999999
Q ss_pred EEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCC-CEEEEEeCCCcEEEEeCC
Q 043707 187 IWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ-GLLYSGSWDKTLKVWRIS 265 (347)
Q Consensus 187 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~s~s~dg~i~vwdl~ 265 (347)
+||++........ ...|...|.+++|+|++ .+|++++.|+.|+|||++
T Consensus 304 vwd~~~~~~~~~~-------------------------------~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 304 LWDLRNLKLKLHS-------------------------------FESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EEETTCTTSCSEE-------------------------------EECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred EEeCCCCCCCeEE-------------------------------eecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 9999875321111 11488999999999987 579999999999999998
Q ss_pred C--------------CEEEEEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEccc
Q 043707 266 D--------------CKCLESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRREL 307 (347)
Q Consensus 266 ~--------------~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~ 307 (347)
. .+.+..+.+|...|.+++|+|++ +|++++.||.|+||++..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 6 36778888999999999999986 799999999999999973
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=1.3e-21 Score=181.41 Aligned_cols=193 Identities=10% Similarity=0.092 Sum_probs=138.8
Q ss_pred cEEEEeecCCEEEEecCCCcEEEEeCCC------------cce-----eeecCCCCeeEEEEeCCCCEEE----EEeCCC
Q 043707 125 HIYSLAASGDLLYTGSDSKNIRVWKNLK------------EFS-----GFKSNSGLVKAIIITGDSNKIF----TGHQDG 183 (347)
Q Consensus 125 ~V~~l~~~~~~l~tg~~dg~I~vwd~~~------------~~~-----~~~~h~~~V~~l~~sp~~~~l~----s~~~Dg 183 (347)
...++...+.++++|+.++ |+||+... ... ....+.+.|.+++|+|++++|+ +|+.|+
T Consensus 40 n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~ 118 (434)
T 2oit_A 40 SLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGS 118 (434)
T ss_dssp BCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEE
T ss_pred cEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCc
Confidence 3446667788999999888 88886211 000 1123556799999999999999 788999
Q ss_pred cEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC-CCEEEEEeCCCcEEEE
Q 043707 184 KIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE-QGLLYSGSWDKTLKVW 262 (347)
Q Consensus 184 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~l~s~s~dg~i~vw 262 (347)
.|+|||+++........... +. ......+|...|.+++|+|+ +.+|++++.||+|++|
T Consensus 119 ~v~iwd~~~~~~~~~~~~~~----------------~~-----~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 119 IIAFFDVRTFSNEAKQQKRP----------------FA-----YHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EEEEEEHHHHHCTTCSSCCC----------------SE-----EEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred eEEEEEccccccCCcCCcce----------------ee-----eeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 99999997641000000000 00 00111248899999999997 8899999999999999
Q ss_pred eCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehh-hh-hccCCcEEEEEEccCCCEE
Q 043707 263 RISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQ-VL-LKQENAITALAVNQESAVV 339 (347)
Q Consensus 263 dl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~-~~-~~h~~~V~~l~~~p~~~~l 339 (347)
|+++++.+.....|...|.+++|+|++ +|++|+.||.|++||++ ... ....... .. ..|...|.+++|++++.++
T Consensus 178 D~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~-~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 178 QVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQE-KKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCE-EEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccc-cccccCCcccCCCCceeEEEEEEecCceEE
Confidence 999998887778899999999999998 99999999999999997 221 0111111 11 1244589999999988877
Q ss_pred EE
Q 043707 340 YC 341 (347)
Q Consensus 340 ~s 341 (347)
++
T Consensus 256 ~~ 257 (434)
T 2oit_A 256 IV 257 (434)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.87 E-value=2.2e-21 Score=175.21 Aligned_cols=188 Identities=17% Similarity=0.131 Sum_probs=127.8
Q ss_pred CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec------ccccccceEEeccCCCeEEEEe-
Q 043707 152 KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG------SLPTFKDYVKSSVNPKNYVEVR- 224 (347)
Q Consensus 152 ~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~- 224 (347)
+.+.....|...|.+++|+|++++|++|+.|+ ++|||+...+........ ..+....++...... ..+.++
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~v~iWd 87 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVK-EVVHIWD 87 (355)
T ss_dssp ---------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSST-TEEEEEE
T ss_pred CCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCc-cEEEEEE
Confidence 44556688999999999999999999998775 789998866433222111 111111121222221 233333
Q ss_pred --ecceeeeeecCCCeeEEEEcCCC-----------------------------------CEEEE--EeCCCcEEEEeCC
Q 043707 225 --RNRNVLKIRHYDAVSCLSLNAEQ-----------------------------------GLLYS--GSWDKTLKVWRIS 265 (347)
Q Consensus 225 --~~~~~~~~~h~~~V~~l~~~~~~-----------------------------------~~l~s--~s~dg~i~vwdl~ 265 (347)
.......+.+...|.+++|+++. .+++. |+.||.|++||++
T Consensus 88 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~ 167 (355)
T 3vu4_A 88 DVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQ 167 (355)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECC
T ss_pred CCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECC
Confidence 23344445577778888777642 23444 5789999999998
Q ss_pred CCE---------------E-EEEEecCCCcEEEEEeCCCC-EEEEEeCCCc-EEEEEcccCCccceeeehhhhh-c-cCC
Q 043707 266 DCK---------------C-LESINAHDDAINSVVAGFDS-LVFTGSADGT-VKVWRRELQGKGTKHFLAQVLL-K-QEN 325 (347)
Q Consensus 266 ~~~---------------~-~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~-I~vwd~~~~~~~~~~~~~~~~~-~-h~~ 325 (347)
+++ + +..+.+|...|.+++|+|++ +|++|+.|++ |++||++.+. .+..+. + |..
T Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~------~~~~~~~g~h~~ 241 (355)
T 3vu4_A 168 SSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV------LVREFRRGLDRA 241 (355)
T ss_dssp C------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC------EEEEEECTTCCS
T ss_pred CCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc------EEEEEEcCCCCC
Confidence 765 2 78889999999999999998 9999999998 9999998544 345555 4 899
Q ss_pred cEEEEEEccCCCEEEEecCCCC
Q 043707 326 AITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 326 ~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
.|++++|+|++++|++|+.||+
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCE
T ss_pred cEEEEEECCCCCEEEEEECCCE
Confidence 9999999999999999999974
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.86 E-value=1.1e-19 Score=167.89 Aligned_cols=220 Identities=11% Similarity=0.082 Sum_probs=157.6
Q ss_pred eeeccccEEEEee--cCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEE-EeCCCcEEEEecCCC
Q 043707 119 IVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFT-GHQDGKIRIWKVSRK 193 (347)
Q Consensus 119 l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s-~~~Dg~I~vwd~~~~ 193 (347)
+.+|.+.|.++.+ ++.++++++.|+.|++||.. +....+..|...+.+++|+|+++++++ ++.|+.|++||++++
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 3467778888887 57799999999999999965 446667788899999999999988854 558999999999877
Q ss_pred CCceeeee-------cccccccceEEeccC------CCeEEEEe---ecceeeeeecCCCeeEEEEcCCCCE-EEEEeCC
Q 043707 194 NPSVHKRV-------GSLPTFKDYVKSSVN------PKNYVEVR---RNRNVLKIRHYDAVSCLSLNAEQGL-LYSGSWD 256 (347)
Q Consensus 194 ~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~---~~~~~~~~~h~~~V~~l~~~~~~~~-l~s~s~d 256 (347)
+....... ...+....++..... ....+.++ .........|...+.+++|+|+++. +++++.|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 324 (433)
T 3bws_A 245 LEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC 324 (433)
T ss_dssp EEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT
T ss_pred cEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCC
Confidence 54322211 111222222222211 11122222 2333344456678999999999975 5666889
Q ss_pred CcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeC---------------CCcEEEEEcccCCccceeeehhhh
Q 043707 257 KTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSA---------------DGTVKVWRRELQGKGTKHFLAQVL 320 (347)
Q Consensus 257 g~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~---------------dg~I~vwd~~~~~~~~~~~~~~~~ 320 (347)
+.|++||+++++.+..+. +...+.+++|+|++ ++++++. ||.|++||+.... ....+
T Consensus 325 ~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~------~~~~~ 397 (433)
T 3bws_A 325 SKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT------VKEFW 397 (433)
T ss_dssp TEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE------EEEEE
T ss_pred CEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc------EEEEe
Confidence 999999999999988887 67789999999998 6777665 5799999997543 22333
Q ss_pred hccCCcEEEEEEccCCCEEEEecC-CC
Q 043707 321 LKQENAITALAVNQESAVVYCGSS-DG 346 (347)
Q Consensus 321 ~~h~~~V~~l~~~p~~~~l~sgs~-DG 346 (347)
.. ...+.+++|+|++++|++++. ||
T Consensus 398 ~~-~~~~~~~~~s~dg~~l~~~~~~d~ 423 (433)
T 3bws_A 398 EA-GNQPTGLDVSPDNRYLVISDFLDH 423 (433)
T ss_dssp EC-SSSEEEEEECTTSCEEEEEETTTT
T ss_pred cC-CCCCceEEEcCCCCEEEEEECCCC
Confidence 33 457999999999999988765 65
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.84 E-value=6.9e-19 Score=160.18 Aligned_cols=188 Identities=12% Similarity=0.163 Sum_probs=143.3
Q ss_pred ceeEeeeeccccEEEEee--cCCEE-EEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEE-EeCCCcEEE
Q 043707 114 GLIGSIVRKEGHIYSLAA--SGDLL-YTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFT-GHQDGKIRI 187 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~--~~~~l-~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s-~~~Dg~I~v 187 (347)
.++..+..|. .+.++.+ ++++| ++++.|+.|++||.. +....+..+ ..+.+++|+|++++|+. +..|+.|++
T Consensus 23 ~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 23 KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSV 100 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-CCccceEECCCCCEEEEEECCCCEEEE
Confidence 3455665554 4777776 56655 788899999999964 334445444 48999999999998755 456799999
Q ss_pred EecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEE-EEEeCCCcEEEEeCCC
Q 043707 188 WKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLL-YSGSWDKTLKVWRISD 266 (347)
Q Consensus 188 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~s~s~dg~i~vwdl~~ 266 (347)
||+.+++..... .+...+.+++|+|+++.| ++++.|+.|++||+++
T Consensus 101 ~d~~~~~~~~~~---------------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 101 IDTTSNTVAGTV---------------------------------KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT 147 (391)
T ss_dssp EETTTTEEEEEE---------------------------------ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EECCCCeEEEEE---------------------------------eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 999877432211 245578999999999877 6788899999999999
Q ss_pred CEEEEEEecCCCcEEEEEeCCCC-EE-EEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 267 CKCLESINAHDDAINSVVAGFDS-LV-FTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 267 ~~~~~~~~~h~~~v~~i~~~~~~-~l-~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
++.+..+..+. .+.+++|+|++ .| ++++.|+.|++||++.... ... ..+...+.+++|+|++++|++++.
T Consensus 148 ~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~------~~~-~~~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 148 KAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV------IDT-VKVEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE------EEE-EECSSEEEEEEECTTSSEEEEEEE
T ss_pred CcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE------EEE-EecCCCccceEECCCCCEEEEEec
Confidence 99999888664 46899999998 55 6778899999999975431 222 235568999999999999998873
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=6.2e-20 Score=170.09 Aligned_cols=192 Identities=15% Similarity=0.036 Sum_probs=136.3
Q ss_pred eccccEEEEeec--CCEEE----EecCCCcEEEEeCCCc-------------ceeeecCCCCeeEEEEeCC-CCEEEEEe
Q 043707 121 RKEGHIYSLAAS--GDLLY----TGSDSKNIRVWKNLKE-------------FSGFKSNSGLVKAIIITGD-SNKIFTGH 180 (347)
Q Consensus 121 ~h~~~V~~l~~~--~~~l~----tg~~dg~I~vwd~~~~-------------~~~~~~h~~~V~~l~~sp~-~~~l~s~~ 180 (347)
.|.+.|.+++|+ +++|+ +|+.|+.|+|||.... ...+.+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 456779888875 77888 8999999999984321 3456679999999999997 88999999
Q ss_pred CCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEE
Q 043707 181 QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLK 260 (347)
Q Consensus 181 ~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~ 260 (347)
.||+|++||++++..... ..+|...|.+++|+|++++|++|+.||+|+
T Consensus 170 ~Dg~v~iwD~~~~~~~~~--------------------------------~~~~~~~v~~v~wspdg~~lasgs~dg~v~ 217 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCA--------------------------------TLPSTVAVTSVCWSPKGKQLAVGKQNGTVV 217 (434)
T ss_dssp TTSCEEEEEESSSEEEEE--------------------------------EECGGGCEEEEEECTTSSCEEEEETTSCEE
T ss_pred CCCeEEEEEcCCCcceee--------------------------------ccCCCCceeEEEEcCCCCEEEEEcCCCcEE
Confidence 999999999987632110 113788999999999999999999999999
Q ss_pred EEeCCCCEEEEEEecCC-------CcEEEEEeCCCCEEE--EEeCCCc------EEEEEcccCCcc--ceeeehhhh---
Q 043707 261 VWRISDCKCLESINAHD-------DAINSVVAGFDSLVF--TGSADGT------VKVWRRELQGKG--TKHFLAQVL--- 320 (347)
Q Consensus 261 vwdl~~~~~~~~~~~h~-------~~v~~i~~~~~~~l~--s~~~dg~------I~vwd~~~~~~~--~~~~~~~~~--- 320 (347)
+||++ ++....+..|. ..|.++.|++++.++ .+..||. +++|+++..+.. .........
T Consensus 218 iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~ 296 (434)
T 2oit_A 218 QYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYG 296 (434)
T ss_dssp EECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCC
T ss_pred EEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCC
Confidence 99998 66666665442 379999999988433 3344433 899999854321 111111100
Q ss_pred -hccCCcEEEEEEccCCCEEEEecCC
Q 043707 321 -LKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 321 -~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
.....+-..+.+.++.+++++++..
T Consensus 297 ~~~~r~~~~~~~~l~dw~l~~v~s~~ 322 (434)
T 2oit_A 297 SCTERQHHYYLSYIEEWDLVLAASAA 322 (434)
T ss_dssp CCSSSCCCEEEEEEGGGTEEEEEETT
T ss_pred CCCCcCcceeeehhccCCEEEEecCC
Confidence 0122222344455777887777653
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.83 E-value=2.5e-18 Score=156.51 Aligned_cols=189 Identities=11% Similarity=0.097 Sum_probs=141.3
Q ss_pred eeEeeeeccccEEEEeec--CCEE-EEecCCCcEEEEeCCCc--ceeeecCCCCeeEEEEeCCCCEE-EEEeCCCcEEEE
Q 043707 115 LIGSIVRKEGHIYSLAAS--GDLL-YTGSDSKNIRVWKNLKE--FSGFKSNSGLVKAIIITGDSNKI-FTGHQDGKIRIW 188 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~--~~~l-~tg~~dg~I~vwd~~~~--~~~~~~h~~~V~~l~~sp~~~~l-~s~~~Dg~I~vw 188 (347)
++..+..|. .+.+++++ +++| +++..++.|++||.... ...+. +...+.+++|+|++++| ++++.|+.|++|
T Consensus 66 ~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 143 (391)
T 1l0q_A 66 VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVI 143 (391)
T ss_dssp EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 344444443 77777764 6666 56667899999996533 33444 44578999999999877 688889999999
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEE-EEEeCCCcEEEEeCCCC
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLL-YSGSWDKTLKVWRISDC 267 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~s~s~dg~i~vwdl~~~ 267 (347)
|+.+++..... .....+.+++|+|+++.| ++++.|+.|++||++++
T Consensus 144 d~~~~~~~~~~---------------------------------~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 144 NTVTKAVINTV---------------------------------SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp ETTTTEEEEEE---------------------------------ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred ECCCCcEEEEE---------------------------------ecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 99876432211 134567899999999877 56778999999999999
Q ss_pred EEEEEEecCCCcEEEEEeCCCC-EEEEEe---CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEE-EEe
Q 043707 268 KCLESINAHDDAINSVVAGFDS-LVFTGS---ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVV-YCG 342 (347)
Q Consensus 268 ~~~~~~~~h~~~v~~i~~~~~~-~l~s~~---~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l-~sg 342 (347)
+++..+. +...+.+++|+|++ +|++++ .++.|++||++... ....+..|. .+.+++|+|++++| +++
T Consensus 191 ~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~------~~~~~~~~~-~~~~~~~s~dg~~l~~s~ 262 (391)
T 1l0q_A 191 SVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK------ITARIPVGP-DPAGIAVTPDGKKVYVAL 262 (391)
T ss_dssp EEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE------EEEEEECCS-SEEEEEECTTSSEEEEEE
T ss_pred eEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe------EEEEEecCC-CccEEEEccCCCEEEEEc
Confidence 9888876 45678999999998 677666 79999999997543 233444443 57999999999887 566
Q ss_pred cCCC
Q 043707 343 SSDG 346 (347)
Q Consensus 343 s~DG 346 (347)
+.||
T Consensus 263 ~~d~ 266 (391)
T 1l0q_A 263 SFXN 266 (391)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7675
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=1e-18 Score=161.11 Aligned_cols=191 Identities=13% Similarity=-0.001 Sum_probs=146.9
Q ss_pred ceeEeeeeccccEEEEee--cCCEEEEecCCC---cEEEEeCCC-cceeeecCCCCeeEEEEeCCCCEEE-EEeCCCc--
Q 043707 114 GLIGSIVRKEGHIYSLAA--SGDLLYTGSDSK---NIRVWKNLK-EFSGFKSNSGLVKAIIITGDSNKIF-TGHQDGK-- 184 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg---~I~vwd~~~-~~~~~~~h~~~V~~l~~sp~~~~l~-s~~~Dg~-- 184 (347)
+.+..+..|.+.|.++++ +|++|++++.++ .|++||... ....+..|.+.+.+++|+|+|++|+ +++.|+.
T Consensus 169 ~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~ 248 (415)
T 2hqs_A 169 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLN 248 (415)
T ss_dssp CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCce
Confidence 356777889999988876 578999998875 999999653 3445677888999999999999887 6766665
Q ss_pred EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-CC--cEEE
Q 043707 185 IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-DK--TLKV 261 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-dg--~i~v 261 (347)
|++||+.+++.. .+ ..|...+.+++|+|+++.|+.++. ++ .|.+
T Consensus 249 i~~~d~~~~~~~---~l------------------------------~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 249 LYVMDLASGQIR---QV------------------------------TDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp EEEEETTTCCEE---EC------------------------------CCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred EEEEECCCCCEE---eC------------------------------cCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 999999876531 11 137778999999999998888876 45 6778
Q ss_pred EeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCC---CcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCC
Q 043707 262 WRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSAD---GTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESA 337 (347)
Q Consensus 262 wdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~d---g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~ 337 (347)
||+.+++. ..+..+...+.+++|+|++ +|++++.+ ..|++||+..+.. ..+..+. .+.+++|+|+|+
T Consensus 296 ~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-------~~l~~~~-~~~~~~~spdg~ 366 (415)
T 2hqs_A 296 VNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-------QVLSSTF-LDETPSLAPNGT 366 (415)
T ss_dssp EETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-------EECCCSS-SCEEEEECTTSS
T ss_pred EECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-------EEecCCC-CcCCeEEcCCCC
Confidence 89987763 4556677889999999998 66666543 5899999975431 2334444 899999999999
Q ss_pred EEEEecCCC
Q 043707 338 VVYCGSSDG 346 (347)
Q Consensus 338 ~l~sgs~DG 346 (347)
+|++++.|+
T Consensus 367 ~l~~~s~~~ 375 (415)
T 2hqs_A 367 MVIYSSSQG 375 (415)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEcCC
Confidence 999988765
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.83 E-value=3.2e-19 Score=164.41 Aligned_cols=172 Identities=10% Similarity=-0.047 Sum_probs=134.3
Q ss_pred CCEEEEecCC------CcEEEEeCC-CcceeeecCCCCeeEEEEeCCCCEEEEEeCCC---cEEEEecCCCCCceeeeec
Q 043707 133 GDLLYTGSDS------KNIRVWKNL-KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDG---KIRIWKVSRKNPSVHKRVG 202 (347)
Q Consensus 133 ~~~l~tg~~d------g~I~vwd~~-~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg---~I~vwd~~~~~~~~~~~~~ 202 (347)
+..++.++.+ +.|++||.. .....+..|...|.+++|+|+|++|++++.|+ .|++||+.+++...
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~----- 217 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ----- 217 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-----
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-----
Confidence 5566665554 799999965 45677888999999999999999999999885 99999998875321
Q ss_pred ccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCEEEEEEecCCCc
Q 043707 203 SLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLY-SGSWDKT--LKVWRISDCKCLESINAHDDA 279 (347)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~dg~--i~vwdl~~~~~~~~~~~h~~~ 279 (347)
...|...+.+++|+|+++.|+ +++.|+. |++||+++++. ..+..|...
T Consensus 218 ----------------------------l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~ 268 (415)
T 2hqs_A 218 ----------------------------VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSN 268 (415)
T ss_dssp ----------------------------EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSC
T ss_pred ----------------------------eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCc
Confidence 113677899999999999777 6666665 99999998776 567778889
Q ss_pred EEEEEeCCCC-EEEEEeC-CC--cEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 280 INSVVAGFDS-LVFTGSA-DG--TVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 280 v~~i~~~~~~-~l~s~~~-dg--~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
+.+++|+|++ .|++++. ++ .|++||+..+. ...+..+...+.+++|+|+|++|++++.+
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~-------~~~l~~~~~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-------PQRITWEGSQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-------CEECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-------EEEEecCCCcccCeEECCCCCEEEEEECc
Confidence 9999999998 6776665 55 56777776432 22344566789999999999999988765
No 130
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.82 E-value=1.5e-18 Score=160.05 Aligned_cols=221 Identities=11% Similarity=0.122 Sum_probs=155.3
Q ss_pred eEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCCc--ce-----eeecCCCCeeEEEEeCCCCEEEEEeCCCcEE
Q 043707 116 IGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLKE--FS-----GFKSNSGLVKAIIITGDSNKIFTGHQDGKIR 186 (347)
Q Consensus 116 i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~--~~-----~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~ 186 (347)
+..+..+. .+.++.+ ++.++++++.++.|++||.... .. .+.+|.+.|.+++|+++++++++++.|+.|+
T Consensus 116 ~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~ 194 (433)
T 3bws_A 116 ISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVH 194 (433)
T ss_dssp EEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEE
T ss_pred EEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEE
Confidence 44444443 3335554 4668888899999999996532 22 3457889999999999999999999999999
Q ss_pred EEecCCCCCceeeee--------cccccccceEEeccCCCeEE--EEeecceeeeeecCCCeeEEEEcCCCCEEEEEe--
Q 043707 187 IWKVSRKNPSVHKRV--------GSLPTFKDYVKSSVNPKNYV--EVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS-- 254 (347)
Q Consensus 187 vwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s-- 254 (347)
+||+++++....... ...+....++........+. +...........+...+.+++|+|++++|++++
T Consensus 195 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 195 VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEE
T ss_pred EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECC
Confidence 999988764332221 11122222323332222222 222223333344556799999999999999988
Q ss_pred ------CCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCc
Q 043707 255 ------WDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENA 326 (347)
Q Consensus 255 ------~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~ 326 (347)
.|+.|++||+++++.+..+. |...+.+++|+|++ ++++++.|+.|++||+.... ....+ .+...
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~------~~~~~-~~~~~ 346 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK------VQKSI-PVFDK 346 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE------EEEEE-ECSSS
T ss_pred CCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc------EEEEe-cCCCC
Confidence 58899999999998877764 55688999999998 55677899999999997432 22222 35678
Q ss_pred EEEEEEccCCCEEEEecCC
Q 043707 327 ITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 327 V~~l~~~p~~~~l~sgs~D 345 (347)
+.+++|+|++++|++++.+
T Consensus 347 ~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 347 PNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp EEEEEECTTSSEEEEEECC
T ss_pred CCeEEEcCCCCEEEEEecC
Confidence 9999999999998888763
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.78 E-value=2.9e-17 Score=142.68 Aligned_cols=195 Identities=10% Similarity=0.045 Sum_probs=141.8
Q ss_pred cceeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCC---cceeeecC-CCCeeEEEEeCCCCEEEEEe--CCCc
Q 043707 113 NGLIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK---EFSGFKSN-SGLVKAIIITGDSNKIFTGH--QDGK 184 (347)
Q Consensus 113 ~~~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~---~~~~~~~h-~~~V~~l~~sp~~~~l~s~~--~Dg~ 184 (347)
.+.+..+..|.+.|.++.+ ++++|++++ ++.|++||... .......+ ...|.+++|+|++++|++++ .++.
T Consensus 31 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 109 (297)
T 2ojh_A 31 TRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGK 109 (297)
T ss_dssp TTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSS
T ss_pred CCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCc
Confidence 3445567778888888876 577888887 78999999655 33334444 36789999999999999999 4456
Q ss_pred EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEE-EEeCCCcEEEEe
Q 043707 185 IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLY-SGSWDKTLKVWR 263 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s~dg~i~vwd 263 (347)
++||.++...... ..+ .+...+.+++|+|+++.|+ ++..|+.++||+
T Consensus 110 ~~l~~~~~~~~~~-~~~-------------------------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~ 157 (297)
T 2ojh_A 110 SAIYLLPSTGGTP-RLM-------------------------------TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYS 157 (297)
T ss_dssp CEEEEEETTCCCC-EEC-------------------------------CSSSSEEEEEECTTSSEEEEEEEETTEEEEEE
T ss_pred ceEEEEECCCCce-EEe-------------------------------ecCCCccceEECCCCCEEEEEECCCCceEEEE
Confidence 6666654322111 111 1333588899999999777 778899999998
Q ss_pred CC-CCEEEEEEecCCCcEEEEEeCCCC-EEEEEe-CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEE
Q 043707 264 IS-DCKCLESINAHDDAINSVVAGFDS-LVFTGS-ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVY 340 (347)
Q Consensus 264 l~-~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~-~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~ 340 (347)
++ .......+..+...+.++.|+|++ +|+.++ .++.+++|++..... ....+..|...+..++|+|++++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~ 232 (297)
T 2ojh_A 158 MDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-----SVERITDSAYGDWFPHPSPSGDKVV 232 (297)
T ss_dssp EETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-----CEEECCCCSEEEEEEEECTTSSEEE
T ss_pred EECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-----CcEEEecCCcccCCeEECCCCCEEE
Confidence 63 233445666788889999999998 555544 699999999874333 2345566777899999999999999
Q ss_pred EecCC
Q 043707 341 CGSSD 345 (347)
Q Consensus 341 sgs~D 345 (347)
+++.|
T Consensus 233 ~~~~~ 237 (297)
T 2ojh_A 233 FVSYD 237 (297)
T ss_dssp EEEEE
T ss_pred EEEcC
Confidence 88765
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.77 E-value=1.5e-16 Score=151.43 Aligned_cols=227 Identities=11% Similarity=0.083 Sum_probs=154.5
Q ss_pred eeEeee-eccccEEEEeecCCEEEEecCCCcEEEEeC--CC--cceeeecCCCCeeEEEEeC----CCCEEEEEeC-CCc
Q 043707 115 LIGSIV-RKEGHIYSLAASGDLLYTGSDSKNIRVWKN--LK--EFSGFKSNSGLVKAIIITG----DSNKIFTGHQ-DGK 184 (347)
Q Consensus 115 ~i~~l~-~h~~~V~~l~~~~~~l~tg~~dg~I~vwd~--~~--~~~~~~~h~~~V~~l~~sp----~~~~l~s~~~-Dg~ 184 (347)
++.++. +|..+..+++++|++|++++.|++|++||. .+ .+..+. +...+..++|+| +|+++++++. +++
T Consensus 171 ~~~~i~~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~ 249 (543)
T 1nir_A 171 IVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQ 249 (543)
T ss_dssp EEEEEECSTTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSE
T ss_pred EEEEEecCcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCe
Confidence 566666 344233445568999999999999999998 33 234444 455689999999 9999999884 899
Q ss_pred EEEEecCCCCCceeeeecc-------------------cccccceEEeccCCCeEEEEeecc----eeeeeecCCCeeEE
Q 043707 185 IRIWKVSRKNPSVHKRVGS-------------------LPTFKDYVKSSVNPKNYVEVRRNR----NVLKIRHYDAVSCL 241 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~h~~~V~~l 241 (347)
|.|||..+.+......... .+....++........+..+.... ....+.+...+..+
T Consensus 250 v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~ 329 (543)
T 1nir_A 250 FAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDG 329 (543)
T ss_dssp EEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCE
T ss_pred EEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCc
Confidence 9999998876544333211 011112222222222222222111 11234566778899
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEeCCCCEEEEEEec----CCCcEEEEEeCCC-C-EEEEEe-CCCcEEEEEcccCCcc-c
Q 043707 242 SLNAEQGLLYSGS-WDKTLKVWRISDCKCLESINA----HDDAINSVVAGFD-S-LVFTGS-ADGTVKVWRRELQGKG-T 312 (347)
Q Consensus 242 ~~~~~~~~l~s~s-~dg~i~vwdl~~~~~~~~~~~----h~~~v~~i~~~~~-~-~l~s~~-~dg~I~vwd~~~~~~~-~ 312 (347)
.|+|++++|++++ .+++|.+||+.+++++..+.. |.+....+ ++|+ + +++++. .|++|.|||+...+.. .
T Consensus 330 ~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~ 408 (543)
T 1nir_A 330 GWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQY 408 (543)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTT
T ss_pred eECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchh
Confidence 9999999877655 589999999999999998874 54433333 4676 4 556665 6899999999863211 1
Q ss_pred eeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 313 KHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 313 ~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
....++.+..|...+..|+++|++++|++++
T Consensus 409 ~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 409 AWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp BTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred cCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 1346778888888899999999999999986
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=6e-17 Score=140.62 Aligned_cols=187 Identities=10% Similarity=-0.001 Sum_probs=134.2
Q ss_pred ccEEE--EeecCCEEEEec--CCCcEEEE--eCCC-cceeeecCCCCeeEEEEeCCCCEEE-EEeCCCcEEEEecCCCCC
Q 043707 124 GHIYS--LAASGDLLYTGS--DSKNIRVW--KNLK-EFSGFKSNSGLVKAIIITGDSNKIF-TGHQDGKIRIWKVSRKNP 195 (347)
Q Consensus 124 ~~V~~--l~~~~~~l~tg~--~dg~I~vw--d~~~-~~~~~~~h~~~V~~l~~sp~~~~l~-s~~~Dg~I~vwd~~~~~~ 195 (347)
..|.+ +.+++++|++++ .++.+.|| +... ....+..+ ..+..++|+|++++|+ ++..|+.++||+++....
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~ 163 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG 163 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC
Confidence 34444 445788888888 33455555 4332 23333333 3589999999999877 788999999999754321
Q ss_pred ceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCEEEEEE
Q 043707 196 SVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS-WDKTLKVWRIS-DCKCLESI 273 (347)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s-~dg~i~vwdl~-~~~~~~~~ 273 (347)
.... ...+...+.+++|+|++++|+.++ .++.++||++. .+..+..+
T Consensus 164 ~~~~-------------------------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 164 VETR-------------------------------LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp CEEE-------------------------------CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC
T ss_pred cceE-------------------------------cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE
Confidence 1111 113667899999999999887766 58999999986 56667778
Q ss_pred ecCCCcEEEEEeCCCC-EEEEEeCC-----------CcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEE
Q 043707 274 NAHDDAINSVVAGFDS-LVFTGSAD-----------GTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYC 341 (347)
Q Consensus 274 ~~h~~~v~~i~~~~~~-~l~s~~~d-----------g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~s 341 (347)
..|...+..+.|+|++ +|++++.+ +.|++||+..... ..+..+..|...+..++|+|++++|++
T Consensus 213 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 213 TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV----ETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC----EEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc----eeeeccCCCCcccccceECCCCCEEEE
Confidence 8888889999999998 67666655 5699999975432 123334467888999999999999988
Q ss_pred ecCCC
Q 043707 342 GSSDG 346 (347)
Q Consensus 342 gs~DG 346 (347)
++.|.
T Consensus 289 ~~~~~ 293 (297)
T 2ojh_A 289 VRYFP 293 (297)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 87653
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.74 E-value=6.7e-17 Score=153.82 Aligned_cols=179 Identities=8% Similarity=0.088 Sum_probs=138.2
Q ss_pred EEEEeecCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec--CCCCCceeeee
Q 043707 126 IYSLAASGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV--SRKNPSVHKRV 201 (347)
Q Consensus 126 V~~l~~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~--~~~~~~~~~~~ 201 (347)
...+.+++.++++++.|++|.+||.. +.+..+..+.. +..++|+|++++|++++.|++|++||+ .+.+....
T Consensus 142 ~~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~--- 217 (543)
T 1nir_A 142 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE--- 217 (543)
T ss_dssp CSCCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE---
T ss_pred ccccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE---
Confidence 34466778899999999999999954 44566663333 899999999999999999999999999 54432111
Q ss_pred cccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC----CCCEEEEEeC-CCcEEEEeCCCCEEEEEEecC
Q 043707 202 GSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA----EQGLLYSGSW-DKTLKVWRISDCKCLESINAH 276 (347)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~----~~~~l~s~s~-dg~i~vwdl~~~~~~~~~~~h 276 (347)
+.+...+..++|+| ++++|++++. +++|.|||..+++++..+..+
T Consensus 218 ------------------------------i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~ 267 (543)
T 1nir_A 218 ------------------------------IKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 267 (543)
T ss_dssp ------------------------------EECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECC
T ss_pred ------------------------------EecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeeccc
Confidence 12455678999999 9999999885 899999999999999988752
Q ss_pred -----------CCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 277 -----------DDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 277 -----------~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
...+..+.+++++ ++++...+++|.+||+..... +......+...+.+++|+|++++|++++
T Consensus 268 g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~-----l~~~~i~~~~~~~~~~~spdg~~l~va~ 342 (543)
T 1nir_A 268 GMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDN-----LTVTSIGAAPFLHDGGWDSSHRYFMTAA 342 (543)
T ss_dssp EECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSS-----CEEEEEECCSSCCCEEECTTSCEEEEEE
T ss_pred CcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCc-----ceeEEeccCcCccCceECCCCCEEEEEe
Confidence 2368899999976 777888999999999975432 1111123456788999999999877654
No 135
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.70 E-value=1.6e-15 Score=155.35 Aligned_cols=220 Identities=11% Similarity=0.028 Sum_probs=154.5
Q ss_pred eEeeeeccc-cEEEEeecCCEEEEecCCCcEEEEeCCC-cceeeec-----------CCCCeeEEEEe-CCCCEEEEEeC
Q 043707 116 IGSIVRKEG-HIYSLAASGDLLYTGSDSKNIRVWKNLK-EFSGFKS-----------NSGLVKAIIIT-GDSNKIFTGHQ 181 (347)
Q Consensus 116 i~~l~~h~~-~V~~l~~~~~~l~tg~~dg~I~vwd~~~-~~~~~~~-----------h~~~V~~l~~s-p~~~~l~s~~~ 181 (347)
...+..|.. ...+++++|++|+.+. ++.|++|+... .+..+.. |...+.+++|+ |+|++|++++
T Consensus 238 ~~~l~~~~~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~- 315 (1045)
T 1k32_A 238 LRKHTSFTDYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS- 315 (1045)
T ss_dssp CEECCCCCSSCEEEEEESSSCEEEEE-TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-
T ss_pred ceEecCCCCcceeeEcCCCCEEEEEe-CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-
Confidence 344444443 3557788999888874 88999999632 2222222 33479999999 9999999888
Q ss_pred CCcEEEEecCCCCCceee--------eecccccccceEEeccCCCeEEEEee---cceeeeeecCCCeeEEEEcCCCCEE
Q 043707 182 DGKIRIWKVSRKNPSVHK--------RVGSLPTFKDYVKSSVNPKNYVEVRR---NRNVLKIRHYDAVSCLSLNAEQGLL 250 (347)
Q Consensus 182 Dg~I~vwd~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~h~~~V~~l~~~~~~~~l 250 (347)
++.|++|++..+...... .+... ....++.... ...++.+.. ........|...+..++|+|++++|
T Consensus 316 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~l 393 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFA 393 (1045)
T ss_dssp TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEE
T ss_pred cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEecCCccceeeeEECCCCCEE
Confidence 889999999876432110 01111 1112222222 222221222 2222233677889999999999999
Q ss_pred EEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCC----------CcEEEEEcccCCccceeeehhh
Q 043707 251 YSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSAD----------GTVKVWRRELQGKGTKHFLAQV 319 (347)
Q Consensus 251 ~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~d----------g~I~vwd~~~~~~~~~~~~~~~ 319 (347)
++++.++.|++||+.+++....+..|...+..++|+||+ +|++++.+ +.|++||+..+. ...
T Consensus 394 a~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-------~~~ 466 (1045)
T 1k32_A 394 VVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-------IFA 466 (1045)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-------EEE
T ss_pred EEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-------EEE
Confidence 999999999999999999888887899999999999998 67766654 499999997431 345
Q ss_pred hhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 320 LLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 320 ~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
+..|...+..++|+|+|++|+.++.++
T Consensus 467 l~~~~~~~~~~~~spdG~~l~~~s~~~ 493 (1045)
T 1k32_A 467 ATTENSHDYAPAFDADSKNLYYLSYRS 493 (1045)
T ss_dssp CSCSSSBEEEEEECTTSCEEEEEESCC
T ss_pred eeCCCcccCCceEcCCCCEEEEEeccc
Confidence 566777899999999999999888754
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.69 E-value=9.8e-16 Score=136.23 Aligned_cols=180 Identities=12% Similarity=0.244 Sum_probs=123.3
Q ss_pred EEEEecCCCcEEEEeCC--Cc--ceeeecCCCCeeEEEEeCCCCEEEEEeCC-CcEEEEecC--CCCCceeeeecccccc
Q 043707 135 LLYTGSDSKNIRVWKNL--KE--FSGFKSNSGLVKAIIITGDSNKIFTGHQD-GKIRIWKVS--RKNPSVHKRVGSLPTF 207 (347)
Q Consensus 135 ~l~tg~~dg~I~vwd~~--~~--~~~~~~h~~~V~~l~~sp~~~~l~s~~~D-g~I~vwd~~--~~~~~~~~~~~~~~~~ 207 (347)
++++++.|+.|++|+.. .. ......+...+.+++|+|++++|++++.+ +.|++|+++ +++.......
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~------ 80 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES------ 80 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE------
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc------
Confidence 45555889999999864 21 22224567789999999999999998887 999999997 3332111111
Q ss_pred cceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCC---CCEEEEEEecCCCcEEEE
Q 043707 208 KDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-DKTLKVWRIS---DCKCLESINAHDDAINSV 283 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-dg~i~vwdl~---~~~~~~~~~~h~~~v~~i 283 (347)
.....+..++|+|++++|++++. ++.|.+||+. ..+.+..+..+ ..+.++
T Consensus 81 -------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~ 134 (343)
T 1ri6_A 81 -------------------------ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSA 134 (343)
T ss_dssp -------------------------ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCC
T ss_pred -------------------------ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEE
Confidence 12337889999999998877765 8889999994 44455555544 458889
Q ss_pred EeCCCC-EEEEEe-CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec-CCC
Q 043707 284 VAGFDS-LVFTGS-ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS-SDG 346 (347)
Q Consensus 284 ~~~~~~-~l~s~~-~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs-~DG 346 (347)
+|+|++ ++++++ .++.|++||+...++................+..++|+|++++|++++ .++
T Consensus 135 ~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 135 NISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred EECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 999998 666666 899999999975332110000011112345788999999999776554 443
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=2e-16 Score=155.57 Aligned_cols=182 Identities=8% Similarity=0.014 Sum_probs=127.4
Q ss_pred ecCCEEEEecCCCcEEEEeCC--CcceeeecCCC---CeeEEEEeCCCCEEEEEeCC---------CcEEEEecCCCCCc
Q 043707 131 ASGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSG---LVKAIIITGDSNKIFTGHQD---------GKIRIWKVSRKNPS 196 (347)
Q Consensus 131 ~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~---~V~~l~~sp~~~~l~s~~~D---------g~I~vwd~~~~~~~ 196 (347)
++|+++++ +.||+|++||.. +....+..|.. .|.+++|+|||++|++++.+ +.|++||+.+++..
T Consensus 26 pdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 104 (723)
T 1xfd_A 26 SDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ 104 (723)
T ss_dssp SSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE
T ss_pred CCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE
Confidence 34555555 578999999954 33445555554 49999999999999999875 77889999987641
Q ss_pred eeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecC
Q 043707 197 VHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAH 276 (347)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h 276 (347)
.... .. .|...+..++|+|||+.|+.++. +.|++||+.+++.......+
T Consensus 105 ~l~~---~~---------------------------~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~ 153 (723)
T 1xfd_A 105 SLDP---PE---------------------------VSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTG 153 (723)
T ss_dssp ECCC---TT---------------------------CCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCC
T ss_pred eccC---Cc---------------------------cccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCC
Confidence 1111 00 25556889999999999999885 79999999988776665554
Q ss_pred CCcE------------------EEEEeCCCC-EEEEEeCCC----------------------------------cEEEE
Q 043707 277 DDAI------------------NSVVAGFDS-LVFTGSADG----------------------------------TVKVW 303 (347)
Q Consensus 277 ~~~v------------------~~i~~~~~~-~l~s~~~dg----------------------------------~I~vw 303 (347)
...+ .++.|+||| .|++++.|+ .|++|
T Consensus 154 ~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~ 233 (723)
T 1xfd_A 154 KEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVI 233 (723)
T ss_dssp BTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEE
T ss_pred CCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEE
Confidence 4333 789999998 777766443 78999
Q ss_pred EcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 304 RRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 304 d~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
|+..............+..+...+..++|+|||++|++.+.
T Consensus 234 d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~ 274 (723)
T 1xfd_A 234 GLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLN 274 (723)
T ss_dssp ESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEE
T ss_pred ECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEc
Confidence 98754310000001112234678999999999998877643
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.69 E-value=1.1e-14 Score=129.30 Aligned_cols=220 Identities=9% Similarity=0.173 Sum_probs=133.6
Q ss_pred eccccEEEEe--ecCCEEEEecCC-CcEEEEeCC--C-c---ceeeecCCCCeeEEEEeCCCCEEEEEeC-CCcEEEEec
Q 043707 121 RKEGHIYSLA--ASGDLLYTGSDS-KNIRVWKNL--K-E---FSGFKSNSGLVKAIIITGDSNKIFTGHQ-DGKIRIWKV 190 (347)
Q Consensus 121 ~h~~~V~~l~--~~~~~l~tg~~d-g~I~vwd~~--~-~---~~~~~~h~~~V~~l~~sp~~~~l~s~~~-Dg~I~vwd~ 190 (347)
.|...+.+++ +++++|++++.+ +.|++|++. . . +..+..+ ..+.+++|+|++++|++++. ++.|++||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 3555555454 568888887776 999999864 1 2 2233333 37899999999998877664 889999999
Q ss_pred CCCC---Cceeee-------ecccccccceEEec-cCCC-eEEEEeeccee-------eeeecCCCeeEEEEcCCCCEEE
Q 043707 191 SRKN---PSVHKR-------VGSLPTFKDYVKSS-VNPK-NYVEVRRNRNV-------LKIRHYDAVSCLSLNAEQGLLY 251 (347)
Q Consensus 191 ~~~~---~~~~~~-------~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~-------~~~~h~~~V~~l~~~~~~~~l~ 251 (347)
..+. ...... +...+....++... .+.. .++.+...... ........+..++|+|++++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp ETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 5221 111111 11112222233333 2222 22223221211 1122345788999999999776
Q ss_pred EEe-CCCcEEEEeCCC--CE--EEEEEec---C---CCcEEEEEeCCCC-EEE-EEeCCCcEEEEEcccCCccceeeehh
Q 043707 252 SGS-WDKTLKVWRISD--CK--CLESINA---H---DDAINSVVAGFDS-LVF-TGSADGTVKVWRRELQGKGTKHFLAQ 318 (347)
Q Consensus 252 s~s-~dg~i~vwdl~~--~~--~~~~~~~---h---~~~v~~i~~~~~~-~l~-s~~~dg~I~vwd~~~~~~~~~~~~~~ 318 (347)
+++ .++.|.+||+.. ++ .+..+.. . ...+..++|+|++ +|+ ++..++.|++||+..... ......
T Consensus 194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~--~~~~~~ 271 (343)
T 1ri6_A 194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGS--VLSKEG 271 (343)
T ss_dssp EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC--CEEEEE
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCC--ceEEee
Confidence 555 789999999953 32 2333321 1 2356789999998 555 556899999999973221 112233
Q ss_pred hhhccCCcEEEEEEccCCCEEEEecC
Q 043707 319 VLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 319 ~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.+..+.. +..++|+|++++|++++.
T Consensus 272 ~~~~~~~-~~~~~~s~dg~~l~~~~~ 296 (343)
T 1ri6_A 272 FQPTETQ-PRGFNVDHSGKYLIAAGQ 296 (343)
T ss_dssp EEECSSS-CCCEEECTTSSEEEEECT
T ss_pred eecCCCc-cceEEECCCCCEEEEecC
Confidence 3333333 889999999998888874
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.68 E-value=7.4e-15 Score=130.33 Aligned_cols=230 Identities=7% Similarity=0.063 Sum_probs=140.4
Q ss_pred eEeeeeccccE-EEEeecCCEEEEe-cCCCcEEEEeCC--Cc-ceeeecCCCCeeEEEEeCCCCEEEEEeCCC---cEEE
Q 043707 116 IGSIVRKEGHI-YSLAASGDLLYTG-SDSKNIRVWKNL--KE-FSGFKSNSGLVKAIIITGDSNKIFTGHQDG---KIRI 187 (347)
Q Consensus 116 i~~l~~h~~~V-~~l~~~~~~l~tg-~~dg~I~vwd~~--~~-~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg---~I~v 187 (347)
+..+..+...+ .++.+++++|+++ ..++.|++||.. +. ...+..+..+..+++|+|++++++++..++ .|++
T Consensus 33 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v 112 (331)
T 3u4y_A 33 LNQITLGYDFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQS 112 (331)
T ss_dssp EEEEECCCCEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEE
T ss_pred eeeEEccCCcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEE
Confidence 44444444444 3344567755555 448999999964 33 445556666666699999999999655553 8999
Q ss_pred EecCCCCCceeeeec-------ccccccceEEeccCCCe---EEEEeecce-----eeeeecCCCeeEEEEcCCCCEEEE
Q 043707 188 WKVSRKNPSVHKRVG-------SLPTFKDYVKSSVNPKN---YVEVRRNRN-----VLKIRHYDAVSCLSLNAEQGLLYS 252 (347)
Q Consensus 188 wd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~h~~~V~~l~~~~~~~~l~s 252 (347)
||+.+++........ ..|....++........ .+.+..... .........+..++|+|++++|+.
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEE
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEE
Confidence 999887643332221 12233333333333222 222211111 122234566899999999996655
Q ss_pred Ee-CCCcEEEEeCCCCEE---EEEEecCCCcEEEEEeCCCC-EEEE-EeCCCcEEEEEcccCCccceeeehhhhh---cc
Q 043707 253 GS-WDKTLKVWRISDCKC---LESINAHDDAINSVVAGFDS-LVFT-GSADGTVKVWRRELQGKGTKHFLAQVLL---KQ 323 (347)
Q Consensus 253 ~s-~dg~i~vwdl~~~~~---~~~~~~h~~~v~~i~~~~~~-~l~s-~~~dg~I~vwd~~~~~~~~~~~~~~~~~---~h 323 (347)
++ .++.|.+||+.+++. +..+..+ ..+..++|+|++ ++++ ...++.|.+||+..+...........+. ..
T Consensus 193 ~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 271 (331)
T 3u4y_A 193 ANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRP 271 (331)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGG
T ss_pred EeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCC
Confidence 54 689999999998887 7777744 567889999998 4544 4468899999997543211111111111 11
Q ss_pred CCcEEEEEEccCCCEEEEecCCC
Q 043707 324 ENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 324 ~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
...+..++|+|++++|++++.++
T Consensus 272 ~~~~~~~~~spdg~~l~v~~~~~ 294 (331)
T 3u4y_A 272 LFGANQMALNKTETKLFISANIS 294 (331)
T ss_dssp GTTCCCEEECTTSSEEEEEETTT
T ss_pred cccccceEECCCCCEEEEecCCC
Confidence 12236699999999887766543
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.68 E-value=2e-14 Score=129.40 Aligned_cols=196 Identities=11% Similarity=0.152 Sum_probs=127.7
Q ss_pred ccccEEEEeecCCEEEEec-CCCcEEEEeCCCc--ce---eeec-----------CCCCeeEEEEeCCCCEEEEEe-CCC
Q 043707 122 KEGHIYSLAASGDLLYTGS-DSKNIRVWKNLKE--FS---GFKS-----------NSGLVKAIIITGDSNKIFTGH-QDG 183 (347)
Q Consensus 122 h~~~V~~l~~~~~~l~tg~-~dg~I~vwd~~~~--~~---~~~~-----------h~~~V~~l~~sp~~~~l~s~~-~Dg 183 (347)
+......+.+++++|++++ .++.|.+|+.... +. .... +...+.+++|+|++++|++++ .++
T Consensus 98 ~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 98 MGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp SSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCC
Confidence 4445666667888766665 6889999985421 11 1111 123468899999999766655 588
Q ss_pred cEEEEecCCCCC------ceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe-CC
Q 043707 184 KIRIWKVSRKNP------SVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS-WD 256 (347)
Q Consensus 184 ~I~vwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s-~d 256 (347)
.|++|++..... ...... .......+...+..++|+|++++|++++ .+
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 232 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGT-------------------------PEAFKVAPGSGPRHLIFNSDGKFAYLINEIG 232 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEE-------------------------EEEEECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred EEEEEEEcCCCCcccccceeeccc-------------------------ccceecCCCCCCeEEEEcCCCCEEEEEcCCC
Confidence 999999886542 110000 0001112455678899999999888777 58
Q ss_pred CcEEEEeCCCCEE--EEEEe---cCCCcEEEEEeCCCC-EEEEEeC--CCcEEEEEcccCCccceeeehhhhhccCCcEE
Q 043707 257 KTLKVWRISDCKC--LESIN---AHDDAINSVVAGFDS-LVFTGSA--DGTVKVWRRELQGKGTKHFLAQVLLKQENAIT 328 (347)
Q Consensus 257 g~i~vwdl~~~~~--~~~~~---~h~~~v~~i~~~~~~-~l~s~~~--dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~ 328 (347)
+.|.+||+.+++. +..+. .+......++|+||+ +|+++.. ++.|.+|++..... .......+.. ...+.
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g--~~~~~~~~~~-g~~~~ 309 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNG--TLTKVGYQLT-GIHPR 309 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTC--CEEEEEEEEC-SSCCC
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCC--cEEEeeEecC-CCCCc
Confidence 9999999987754 33333 233457899999998 6655554 58999999963211 1112222222 45678
Q ss_pred EEEEccCCCEEEEecCC
Q 043707 329 ALAVNQESAVVYCGSSD 345 (347)
Q Consensus 329 ~l~~~p~~~~l~sgs~D 345 (347)
+++|+|+|++|++++.+
T Consensus 310 ~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 310 NFIITPNGKYLLVACRD 326 (361)
T ss_dssp EEEECTTSCEEEEEETT
T ss_pred eEEECCCCCEEEEEECC
Confidence 99999999998888743
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=1.1e-14 Score=130.21 Aligned_cols=183 Identities=11% Similarity=0.147 Sum_probs=133.1
Q ss_pred EEEEe--ecCCEEEEec--CCCcEEEEeCCCc--ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee
Q 043707 126 IYSLA--ASGDLLYTGS--DSKNIRVWKNLKE--FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 126 V~~l~--~~~~~l~tg~--~dg~I~vwd~~~~--~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~ 199 (347)
+.++. ++++++++++ .++.|.+||.... ...+..+...+.+++|+|++++++++..++.|.+||+.+++.....
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~ 222 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRK 222 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEE
Confidence 44444 4677666665 5789999996533 4444445566899999999999999999999999999887543222
Q ss_pred eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCEEEEEEecCCC
Q 043707 200 RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-DKTLKVWRISDCKCLESINAHDD 278 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-dg~i~vwdl~~~~~~~~~~~h~~ 278 (347)
.... .++...+..++|+|+++.|++++. ++.|.+||+.+++.+..+.....
T Consensus 223 ~~~~----------------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 274 (353)
T 3vgz_A 223 KLLD----------------------------DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES 274 (353)
T ss_dssp ECCC----------------------------SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC
T ss_pred EcCC----------------------------CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 2110 024556788999999997777765 49999999999999888875443
Q ss_pred cEEEEEeCCCC-EEE-EEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 279 AINSVVAGFDS-LVF-TGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 279 ~v~~i~~~~~~-~l~-s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
..++|+|++ +++ +...++.|.+||+.... ....+. ....+.+++|+|++++|+.+..+
T Consensus 275 --~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~------~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 275 --LAVLFNPARNEAYVTHRQAGKVSVIDAKSYK------VVKTFD-TPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp --CCEEEETTTTEEEEEETTTTEEEEEETTTTE------EEEEEE-CCSEEEEEEECTTSCEEEEEEEC
T ss_pred --ceEEECCCCCEEEEEECCCCeEEEEECCCCe------EEEEEe-cCCCCCeEEEcCCCCEEEEEEcc
Confidence 568999997 444 55579999999997543 222222 23478999999999987777655
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.67 E-value=1.4e-15 Score=150.10 Aligned_cols=177 Identities=7% Similarity=0.012 Sum_probs=129.9
Q ss_pred EEeecCCEEEEecC-CC-----cEEEEeCCCc--ceeeecCCC------------------------CeeEEEEeCCCCE
Q 043707 128 SLAASGDLLYTGSD-SK-----NIRVWKNLKE--FSGFKSNSG------------------------LVKAIIITGDSNK 175 (347)
Q Consensus 128 ~l~~~~~~l~tg~~-dg-----~I~vwd~~~~--~~~~~~h~~------------------------~V~~l~~sp~~~~ 175 (347)
+++++|++|++++. |+ .|++||.... ...+..+.. .|.+++|+|||++
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~ 122 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQR 122 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSE
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCE
Confidence 44557889999988 88 8999996532 233333322 3789999999999
Q ss_pred EEEEeCCCcEEEEecCCC---CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEE
Q 043707 176 IFTGHQDGKIRIWKVSRK---NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYS 252 (347)
Q Consensus 176 l~s~~~Dg~I~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s 252 (347)
|++++. +.|++||+.++ ..... ..|...+.+++|+|||++|+.
T Consensus 123 l~~~~~-~~i~~~d~~~~~~~~~~~l---------------------------------~~~~~~~~~~~~SPDG~~la~ 168 (741)
T 2ecf_A 123 LLFPLG-GELYLYDLKQEGKAAVRQL---------------------------------THGEGFATDAKLSPKGGFVSF 168 (741)
T ss_dssp EEEEET-TEEEEEESSSCSTTSCCBC---------------------------------CCSSSCEEEEEECTTSSEEEE
T ss_pred EEEEeC-CcEEEEECCCCCcceEEEc---------------------------------ccCCcccccccCCCCCCEEEE
Confidence 999986 89999999887 32111 126678999999999999999
Q ss_pred EeCCCcEEEEeCCCCEEEEEEecCCCc----------------EEEEEeCCCC-EEEEEeCCC-----------------
Q 043707 253 GSWDKTLKVWRISDCKCLESINAHDDA----------------INSVVAGFDS-LVFTGSADG----------------- 298 (347)
Q Consensus 253 ~s~dg~i~vwdl~~~~~~~~~~~h~~~----------------v~~i~~~~~~-~l~s~~~dg----------------- 298 (347)
++ ++.|++||+.+++.......+... +..+.|+||+ +|++++.|+
T Consensus 169 ~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~ 247 (741)
T 2ecf_A 169 IR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTD 247 (741)
T ss_dssp EE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred Ee-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCccc
Confidence 88 569999999998876555444332 4779999998 677776655
Q ss_pred ----------------cEEEEEccc-CCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 299 ----------------TVKVWRREL-QGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 299 ----------------~I~vwd~~~-~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.|++||+.. +.. . .+.....|...+..++| |||++|+.++.
T Consensus 248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~--~--~~~~~~~~~~~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 248 VIEQRYPAAGDANVQVKLGVISPAEQAQT--Q--WIDLGKEQDIYLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp EEEEECCBTTSCCCEEEEEEECSSTTCCC--E--EECCCSCSSEEEEEEEE-EETTEEEEEEE
T ss_pred ceEeecCCCCCCCCeeEEEEEECCCCCce--E--EecCCCCcceEEEEEEe-CCCCEEEEEEe
Confidence 788888874 321 1 11111247778999999 99999987654
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.67 E-value=1.2e-15 Score=146.59 Aligned_cols=213 Identities=9% Similarity=-0.013 Sum_probs=143.0
Q ss_pred cccEEEEe--ecCCEEEEecC-CCcEEEEeCC-CcceeeecCC-CCeeEEEEeCCCCEEEEEeC---CCcEEEEecCC--
Q 043707 123 EGHIYSLA--ASGDLLYTGSD-SKNIRVWKNL-KEFSGFKSNS-GLVKAIIITGDSNKIFTGHQ---DGKIRIWKVSR-- 192 (347)
Q Consensus 123 ~~~V~~l~--~~~~~l~tg~~-dg~I~vwd~~-~~~~~~~~h~-~~V~~l~~sp~~~~l~s~~~---Dg~I~vwd~~~-- 192 (347)
..+|+++. ++|++||.++. ||+++||++. .....+..|. ..+..++|+|+ +.++++.. +...++|.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 34577765 67999998877 9999999853 2234445555 58999999999 77777775 55667766654
Q ss_pred CCCceee-------eecccccccc-eEE-eccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC----CcE
Q 043707 193 KNPSVHK-------RVGSLPTFKD-YVK-SSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD----KTL 259 (347)
Q Consensus 193 ~~~~~~~-------~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d----g~i 259 (347)
....... .....+.... .+. ...+...++++..........+.. ..++|+|||++|+.++.| +.|
T Consensus 100 ~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i 177 (582)
T 3o4h_A 100 PGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSL 177 (582)
T ss_dssp TTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEE
T ss_pred CCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEE
Confidence 2111110 0011112211 111 122222333443333333333433 789999999999988877 789
Q ss_pred EEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCC--cEEEEEcccCCccceeeehhhhhccCCcEEEEE-----
Q 043707 260 KVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADG--TVKVWRRELQGKGTKHFLAQVLLKQENAITALA----- 331 (347)
Q Consensus 260 ~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg--~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~----- 331 (347)
++||+.+++.. .+..|...+..++|+||| .|+++..++ .|++||+..+.. . .+..|...+..++
T Consensus 178 ~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~------~-~~~~~~~~~~~~~~~~~~ 249 (582)
T 3o4h_A 178 FTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV------E-DLELPSKDFSSYRPTAIT 249 (582)
T ss_dssp EEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE------E-ECCCSCSHHHHHCCSEEE
T ss_pred EEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE------E-EccCCCcChhhhhhcccc
Confidence 99999887754 677888889999999998 777788888 899999975432 2 4455666666666
Q ss_pred ---EccCCCEEEEecCCC
Q 043707 332 ---VNQESAVVYCGSSDG 346 (347)
Q Consensus 332 ---~~p~~~~l~sgs~DG 346 (347)
|+|||.++++++.||
T Consensus 250 ~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 250 WLGYLPDGRLAVVARREG 267 (582)
T ss_dssp EEEECTTSCEEEEEEETT
T ss_pred ceeEcCCCcEEEEEEcCC
Confidence 999998888888876
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=2e-14 Score=127.59 Aligned_cols=175 Identities=7% Similarity=0.101 Sum_probs=125.1
Q ss_pred CCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeC-CCcEEEEecCCCCC-ceeeeeccccccc
Q 043707 133 GDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQ-DGKIRIWKVSRKNP-SVHKRVGSLPTFK 208 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~-Dg~I~vwd~~~~~~-~~~~~~~~~~~~~ 208 (347)
+.+++++..++.|++||.. +....+..+...+ +++|+|+++++++++. ++.|.+||+.+++. .....
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-------- 80 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-------- 80 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE--------
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc--------
Confidence 3368888999999999954 3344555555667 9999999997776665 89999999988764 11111
Q ss_pred ceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCC---cEEEEeCCCCEEEEEEecCCCcEEEEEe
Q 043707 209 DYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDK---TLKVWRISDCKCLESINAHDDAINSVVA 285 (347)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg---~i~vwdl~~~~~~~~~~~h~~~v~~i~~ 285 (347)
.+.....+++|+|++++|+++..++ .|.+||+.+++.+..+..+. ....++|
T Consensus 81 ------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~ 135 (331)
T 3u4y_A 81 ------------------------EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAI 135 (331)
T ss_dssp ------------------------ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEE
T ss_pred ------------------------cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEE
Confidence 2444444599999999999655553 89999999999988887544 4689999
Q ss_pred CCCC--EEEEEeCCCc-EEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 286 GFDS--LVFTGSADGT-VKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 286 ~~~~--~l~s~~~dg~-I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
+|++ ++++...++. |.+|++...+...... .........+..++|+|+|++|+.++
T Consensus 136 spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 136 SPNGNGLILIDRSSANTVRRFKIDADGVLFDTG--QEFISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE--EEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred CCCCCEEEEEecCCCceEEEEEECCCCcEeecC--CccccCCCCccceEECCCCCEEEEEe
Confidence 9998 4445566688 9999997443211111 11123345689999999999766554
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.66 E-value=2e-15 Score=148.39 Aligned_cols=187 Identities=6% Similarity=-0.069 Sum_probs=125.8
Q ss_pred EEE--EeecCCEEEEecCC---------CcEEEEeCCCc-ceee---ecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEec
Q 043707 126 IYS--LAASGDLLYTGSDS---------KNIRVWKNLKE-FSGF---KSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKV 190 (347)
Q Consensus 126 V~~--l~~~~~~l~tg~~d---------g~I~vwd~~~~-~~~~---~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~ 190 (347)
|.+ ++++|++|++++.+ +.|++||.... ...+ ..|...+..++|+|||++|+.++. +.|++||+
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~ 141 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAH 141 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESS
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEEC
Confidence 555 45678899998764 78889996533 2223 344556899999999999999886 79999999
Q ss_pred CCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeec---------CCCeeEEEEcCCCCEEEEEeCCC----
Q 043707 191 SRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRH---------YDAVSCLSLNAEQGLLYSGSWDK---- 257 (347)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---------~~~V~~l~~~~~~~~l~s~s~dg---- 257 (347)
.+++........... ....++ ...+.+++|+|||+.|+.++.|+
T Consensus 142 ~~g~~~~~~~~~~~~-----------------------~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~ 198 (723)
T 1xfd_A 142 VGKQAIRVVSTGKEG-----------------------VIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVP 198 (723)
T ss_dssp SSSCCEEEECCCBTT-----------------------TEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSC
T ss_pred CCCceEEEecCCCCC-----------------------ceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccc
Confidence 887643221110000 000011 12347899999999998887553
Q ss_pred ------------------------------cEEEEeCCCCEEEEEEecC------CCcEEEEEeCCCC-EEEEEe----C
Q 043707 258 ------------------------------TLKVWRISDCKCLESINAH------DDAINSVVAGFDS-LVFTGS----A 296 (347)
Q Consensus 258 ------------------------------~i~vwdl~~~~~~~~~~~h------~~~v~~i~~~~~~-~l~s~~----~ 296 (347)
.|++||+.+++....+..+ ...+..+.|+||+ +|++.. .
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 278 (723)
T 1xfd_A 199 IMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQN 278 (723)
T ss_dssp EEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSC
T ss_pred eEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCC
Confidence 7999999988866666654 6678999999999 554443 3
Q ss_pred CCcEEEEEcccCCccceeeehhhhh-ccCCcE----EEEEEccCCCEEEEe
Q 043707 297 DGTVKVWRRELQGKGTKHFLAQVLL-KQENAI----TALAVNQESAVVYCG 342 (347)
Q Consensus 297 dg~I~vwd~~~~~~~~~~~~~~~~~-~h~~~V----~~l~~~p~~~~l~sg 342 (347)
+..|++||+..+.. ...+. .+...+ ..++|+|||+.|+..
T Consensus 279 ~~~i~~~d~~~g~~------~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 279 VSILTLCDATTGVC------TKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EEEEEEEETTTCCE------EEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eEEEEEEeCCCCcc------eEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 36899999875432 22222 233333 378999999877754
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.66 E-value=2e-14 Score=128.62 Aligned_cols=194 Identities=11% Similarity=0.135 Sum_probs=128.9
Q ss_pred eeccccEE--EEeecCCEEEEec-CCCcEEEEeCCC--c---ceeeec---------CCCCeeEEEEeCCCCEEEEEeCC
Q 043707 120 VRKEGHIY--SLAASGDLLYTGS-DSKNIRVWKNLK--E---FSGFKS---------NSGLVKAIIITGDSNKIFTGHQD 182 (347)
Q Consensus 120 ~~h~~~V~--~l~~~~~~l~tg~-~dg~I~vwd~~~--~---~~~~~~---------h~~~V~~l~~sp~~~~l~s~~~D 182 (347)
..+...+. ++.++|++|++++ .++.|.+|+... . +..+.. +...+.+++|+|+++.+++...+
T Consensus 82 ~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 82 VAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp EEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred ecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC
Confidence 33444443 4456788777776 789999999641 1 122211 12348899999999966666778
Q ss_pred CcEEEEecC-CCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEE-EeCCCcEE
Q 043707 183 GKIRIWKVS-RKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYS-GSWDKTLK 260 (347)
Q Consensus 183 g~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s-~s~dg~i~ 260 (347)
+.|++|++. +++....... .......+..++|+|++++|++ +..++.|.
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~-----------------------------~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~ 212 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVL-----------------------------TMEAGFGPRHLVFSPDGQYAFLAGELSSQIA 212 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEE-----------------------------ECCTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CEEEEEEECCCCcEEEeeeE-----------------------------EcCCCCCCceEEECCCCCEEEEEeCCCCEEE
Confidence 899999998 3321111100 0012335678999999996666 45688999
Q ss_pred EEeCCC--CEE--EEEEecCC------CcEEEEEeCCCC-EE-EEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEE
Q 043707 261 VWRISD--CKC--LESINAHD------DAINSVVAGFDS-LV-FTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAIT 328 (347)
Q Consensus 261 vwdl~~--~~~--~~~~~~h~------~~v~~i~~~~~~-~l-~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~ 328 (347)
+|++.. ++. +..+.... ..+..++|+|++ +| ++...++.|.+|++...+ .......+..+...+.
T Consensus 213 v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g---~~~~~~~~~~~~~~~~ 289 (347)
T 3hfq_A 213 SLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG---HLTLIQQISTEGDFPR 289 (347)
T ss_dssp EEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG---CEEEEEEEECSSSCCC
T ss_pred EEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC---cEEEeEEEecCCCCcC
Confidence 999874 543 33343332 458899999998 45 556679999999996332 1223444455566789
Q ss_pred EEEEccCCCEEEEecCC
Q 043707 329 ALAVNQESAVVYCGSSD 345 (347)
Q Consensus 329 ~l~~~p~~~~l~sgs~D 345 (347)
.++|+|+|++|++++.+
T Consensus 290 ~~~~spdg~~l~v~~~~ 306 (347)
T 3hfq_A 290 DFDLDPTEAFVVVVNQN 306 (347)
T ss_dssp EEEECTTSSEEEEEETT
T ss_pred eEEECCCCCEEEEEEcC
Confidence 99999999998888765
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.64 E-value=3.4e-14 Score=126.96 Aligned_cols=196 Identities=7% Similarity=0.022 Sum_probs=134.7
Q ss_pred ccEEEE--eecCCEEEEecC-------CCcEEEEeCCC--cceeeecCCCCeeEEEEeCCCCEEEE-EeCCCcEEEEecC
Q 043707 124 GHIYSL--AASGDLLYTGSD-------SKNIRVWKNLK--EFSGFKSNSGLVKAIIITGDSNKIFT-GHQDGKIRIWKVS 191 (347)
Q Consensus 124 ~~V~~l--~~~~~~l~tg~~-------dg~I~vwd~~~--~~~~~~~h~~~V~~l~~sp~~~~l~s-~~~Dg~I~vwd~~ 191 (347)
..+..+ .++++++++++. ++.|.+||... ....+.. ...+..++|+|++++++. ...++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 344444 456777777764 56899999653 3334433 345789999999986554 4567999999998
Q ss_pred CCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCEE
Q 043707 192 RKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS--WDKTLKVWRISDCKC 269 (347)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s--~dg~i~vwdl~~~~~ 269 (347)
+++............. .......+.+++|+|+++++++++ .++.|.+||+.+++.
T Consensus 120 ~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRT-----------------------EEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKL 176 (353)
T ss_dssp TCCEEEEEESCCCCCC-----------------------SSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE
T ss_pred CCeeEEEEecCCCccc-----------------------cccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCce
Confidence 8764333222100000 000112368899999999888776 478899999999999
Q ss_pred EEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 270 LESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 270 ~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
+..+..+...+..++|+|++ ++++++.++.|.+||+..... .........++...+..++|+|++++|++++.+
T Consensus 177 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 251 (353)
T 3vgz_A 177 KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI--LSRKKLLDDGKEHFFINISLDTARQRAFITDSK 251 (353)
T ss_dssp EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE--EEEEECCCSSSCCCEEEEEEETTTTEEEEEESS
T ss_pred EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE--EEEEEcCCCCCCcccceEEECCCCCEEEEEeCC
Confidence 98888666668899999997 788888999999999975432 111111112345578899999999988777654
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.63 E-value=3.5e-14 Score=125.78 Aligned_cols=202 Identities=10% Similarity=0.060 Sum_probs=127.6
Q ss_pred CEEEEecCCCcEEEEeCCC--cceeeecCCC--CeeEEEEeCCCCEE-EEEeCCCcEEEEecCCCCCceeeeecc-----
Q 043707 134 DLLYTGSDSKNIRVWKNLK--EFSGFKSNSG--LVKAIIITGDSNKI-FTGHQDGKIRIWKVSRKNPSVHKRVGS----- 203 (347)
Q Consensus 134 ~~l~tg~~dg~I~vwd~~~--~~~~~~~h~~--~V~~l~~sp~~~~l-~s~~~Dg~I~vwd~~~~~~~~~~~~~~----- 203 (347)
++|++++.++.|++||... ....+..... .+..++|+|+++++ +++..++.|.+||+.+++.........
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999653 2333332221 57889999998765 455567899999998876543332211
Q ss_pred --------cccccceEEecc-----------CCCeEE--EEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEE
Q 043707 204 --------LPTFKDYVKSSV-----------NPKNYV--EVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVW 262 (347)
Q Consensus 204 --------~~~~~~~~~~~~-----------~~~~~~--~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vw 262 (347)
.+....++.... ....+. +.........+.....+.+++|+|++++|+++ ++.|.+|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 111112222210 011111 11111222233345567889999999988887 6889999
Q ss_pred eCCCCEEEEEEecCC-----------------------------------------------------------------
Q 043707 263 RISDCKCLESINAHD----------------------------------------------------------------- 277 (347)
Q Consensus 263 dl~~~~~~~~~~~h~----------------------------------------------------------------- 277 (347)
|+.+++.+..+..+.
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 998888766554322
Q ss_pred -CcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 278 -DAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 278 -~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
..+..++|+|++ +++++ ++.|++||+..... ...+. ....+.+++|+|++++|++++.|+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~------~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 301 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNAS------IKRVP-LPHSYYSVNVSTDGSTVWLGGALG 301 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEE------EEEEE-CSSCCCEEEECTTSCEEEEESBSS
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcC------cceec-CCCceeeEEECCCCCEEEEEcCCC
Confidence 124468899998 66666 79999999975432 22222 234678999999999999887765
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.63 E-value=5.3e-15 Score=145.09 Aligned_cols=193 Identities=10% Similarity=0.169 Sum_probs=131.1
Q ss_pred EeeeeccccEEE--EeecCCEEEEecCCCcEEEEeCCC-------cceeeecCCCC--------------eeEEEEeCCC
Q 043707 117 GSIVRKEGHIYS--LAASGDLLYTGSDSKNIRVWKNLK-------EFSGFKSNSGL--------------VKAIIITGDS 173 (347)
Q Consensus 117 ~~l~~h~~~V~~--l~~~~~~l~tg~~dg~I~vwd~~~-------~~~~~~~h~~~--------------V~~l~~sp~~ 173 (347)
..+..+.+.+.+ ++++|++|+.+ .++.|++|+... .......+... +.+++|+|||
T Consensus 114 ~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg 192 (706)
T 2z3z_A 114 TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG 192 (706)
T ss_dssp EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS
T ss_pred EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC
Confidence 334445444543 44578888885 579999999654 22222233332 5899999999
Q ss_pred CEEEEEe---------------------------------CCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeE
Q 043707 174 NKIFTGH---------------------------------QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNY 220 (347)
Q Consensus 174 ~~l~s~~---------------------------------~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
++|++++ .+..|++||+.+++......
T Consensus 193 ~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~-------------------- 252 (706)
T 2z3z_A 193 SCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQT-------------------- 252 (706)
T ss_dssp SEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCC--------------------
T ss_pred CEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeecc--------------------
Confidence 9999987 33567777776553211100
Q ss_pred EEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCEEEEEEe--cCCC---cEEEEEeCC--C
Q 043707 221 VEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDK-----TLKVWRISDCKCLESIN--AHDD---AINSVVAGF--D 288 (347)
Q Consensus 221 ~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg-----~i~vwdl~~~~~~~~~~--~h~~---~v~~i~~~~--~ 288 (347)
...|...+.+++|+|+++.|++++.++ .|++||+.+++....+. .+.. .+..+.|+| +
T Consensus 253 ----------~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~d 322 (706)
T 2z3z_A 253 ----------GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSN 322 (706)
T ss_dssp ----------CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCS
T ss_pred ----------CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCC
Confidence 002667799999999999999987776 89999999984333332 2222 246789999 8
Q ss_pred C-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEE-EEEccCCCEEEEecCC
Q 043707 289 S-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITA-LAVNQESAVVYCGSSD 345 (347)
Q Consensus 289 ~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~-l~~~p~~~~l~sgs~D 345 (347)
+ +++++..|+.++||++...+. ....+..+...+.. ++|+|+++.|+.++.+
T Consensus 323 g~~l~~~~~~g~~~l~~~~~~~~-----~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 323 NQFIWQSRRDGWNHLYLYDTTGR-----LIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp SEEEEEECTTSSCEEEEEETTSC-----EEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred CEEEEEEccCCccEEEEEECCCC-----EEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 8 777888999999998873332 34455567777877 8999999887765544
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.63 E-value=1.4e-14 Score=142.82 Aligned_cols=207 Identities=9% Similarity=0.056 Sum_probs=141.5
Q ss_pred EEeecCCEEEEecCCCcEEEEeCCC----cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeee---
Q 043707 128 SLAASGDLLYTGSDSKNIRVWKNLK----EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKR--- 200 (347)
Q Consensus 128 ~l~~~~~~l~tg~~dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~--- 200 (347)
+++++|++|++++. +.|++||... ....+..|...+.+++|+|||++|+.++ ++.|++||+.+++......
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 45567889998886 8999999653 4566777888999999999999999887 5699999998764322111
Q ss_pred ---------------------ecccccccceEEeccCCC-------------------------------eEEEEee---
Q 043707 201 ---------------------VGSLPTFKDYVKSSVNPK-------------------------------NYVEVRR--- 225 (347)
Q Consensus 201 ---------------------~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~--- 225 (347)
+...|....++....+.. ..+.+..
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 112233333333322210 0111111
Q ss_pred -cceeeee---ecCCCeeEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCEEEEEEecCCC----cEEEEEeCCCC-EE
Q 043707 226 -NRNVLKI---RHYDAVSCLSLNAEQGLLYSGSW-----DKTLKVWRISDCKCLESINAHDD----AINSVVAGFDS-LV 291 (347)
Q Consensus 226 -~~~~~~~---~h~~~V~~l~~~~~~~~l~s~s~-----dg~i~vwdl~~~~~~~~~~~h~~----~v~~i~~~~~~-~l 291 (347)
....... .|...+..++| ||++.|+.++. +..|++||+.++++...+..+.. .+..++|+||+ ++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 1111111 36677899999 99999987754 56799999999988777765543 45688999998 77
Q ss_pred EEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEE-EEccCCCEEEEec
Q 043707 292 FTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITAL-AVNQESAVVYCGS 343 (347)
Q Consensus 292 ~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l-~~~p~~~~l~sgs 343 (347)
++++.||.++||.+...+. ...+..|...|..+ .|+|+++.|+..+
T Consensus 352 ~~~~~~g~~~l~~~~~~~~------~~~l~~~~~~v~~~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 352 WSSERTGFQHLYRIDSKGK------AAALTHGNWSVDELLAVDEKAGLAYFRA 398 (741)
T ss_dssp EEECTTSSCEEEEECSSSC------EEESCCSSSCEEEEEEEETTTTEEEEEE
T ss_pred EEecCCCccEEEEEcCCCC------eeeeeecceEEEeEeEEeCCCCEEEEEE
Confidence 8888999999998764332 34455677788887 5999998775543
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.62 E-value=9.1e-15 Score=149.72 Aligned_cols=219 Identities=10% Similarity=0.034 Sum_probs=152.3
Q ss_pred ceeEeeeeccccEEEEeecCC-EEEEecCCCcEEEEeC---CCcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 114 GLIGSIVRKEGHIYSLAASGD-LLYTGSDSKNIRVWKN---LKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~~-~l~tg~~dg~I~vwd~---~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
+....+.+|.+.+.++.|+++ ++++++.|+.+.||.. ......+..|. .+..++|+|+|++|+.+. ++.|++||
T Consensus 194 ~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d 271 (1045)
T 1k32_A 194 GAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFN 271 (1045)
T ss_dssp TEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEEC
T ss_pred CCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEec
Confidence 345566889999999999876 5567788899999963 23344555554 467789999999988884 89999999
Q ss_pred cCCCCCceeee-------------------eccc-ccccceEEeccCCCeEEEE--eecceeeeeecCC-CeeEEEEcCC
Q 043707 190 VSRKNPSVHKR-------------------VGSL-PTFKDYVKSSVNPKNYVEV--RRNRNVLKIRHYD-AVSCLSLNAE 246 (347)
Q Consensus 190 ~~~~~~~~~~~-------------------~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~h~~-~V~~l~~~~~ 246 (347)
+...... ... +... |....++... . ..+... ..........|.. .+..++|+ +
T Consensus 272 ~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-d 347 (1045)
T 1k32_A 272 PDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-R-GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-T 347 (1045)
T ss_dssp TTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-T-TEEEEECTTSSBEEECSCCSCEEEEEECSS-S
T ss_pred CCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-c-CEEEEEcCCCCceEEccCCCcceEEeeeEc-C
Confidence 8443221 100 0011 2222222211 1 111111 1122222334666 78999999 9
Q ss_pred CCEEEEEeCCCcEE-EEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccC
Q 043707 247 QGLLYSGSWDKTLK-VWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQE 324 (347)
Q Consensus 247 ~~~l~s~s~dg~i~-vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~ 324 (347)
++.|+.++.++.+. +||+..++.. .+..|...+..++|+||+ +|++++.++.|++||+..+. ....+..|.
T Consensus 348 g~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~------~~~~~~~~~ 420 (1045)
T 1k32_A 348 KVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK------PTVIERSRE 420 (1045)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC------EEEEEECSS
T ss_pred CCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc------eEEeccCCC
Confidence 99999999888888 9999877654 344788889999999998 88899999999999997543 233344688
Q ss_pred CcEEEEEEccCCCEEEEecCC
Q 043707 325 NAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 325 ~~V~~l~~~p~~~~l~sgs~D 345 (347)
..|.+++|+|||++|++++.+
T Consensus 421 ~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 421 AMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp SCCCCEEECTTSCEEEEEEEE
T ss_pred CCccceEECCCCCeEEEEecC
Confidence 889999999999999988764
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.62 E-value=6.6e-15 Score=141.32 Aligned_cols=173 Identities=12% Similarity=0.054 Sum_probs=131.7
Q ss_pred EEEEeecCC-EEEEecCCCcEEEEeCCCc-ceeeecCCCCeeEEEEeCCCCEEEEEeCC----CcEEEEecCCCCCceee
Q 043707 126 IYSLAASGD-LLYTGSDSKNIRVWKNLKE-FSGFKSNSGLVKAIIITGDSNKIFTGHQD----GKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 126 V~~l~~~~~-~l~tg~~dg~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~~~~l~s~~~D----g~I~vwd~~~~~~~~~~ 199 (347)
+.+++++|+ .+++.+.++.+.+||.... ...+..+.. .+++|+|||++|++++.| +.|++||+.+++....
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l- 190 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF- 190 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE-
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe-
Confidence 668888886 3344444455669985432 333333333 899999999999988877 7899999988764211
Q ss_pred eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCC--cEEEEeCCCCEEEEEEecCC
Q 043707 200 RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDK--TLKVWRISDCKCLESINAHD 277 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg--~i~vwdl~~~~~~~~~~~h~ 277 (347)
..|...+..++|+|||+.|+++..++ .|++||+.+++.. .+..|.
T Consensus 191 --------------------------------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~ 237 (582)
T 3o4h_A 191 --------------------------------DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS 237 (582)
T ss_dssp --------------------------------CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC
T ss_pred --------------------------------ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC
Confidence 13777889999999999999888888 8999999998887 777787
Q ss_pred CcEEEEE--------eCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 278 DAINSVV--------AGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 278 ~~v~~i~--------~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
..+..+. |+||+ ++++++.|+++++|++ ++ ... .+...|.+++|+ +++++++++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~---g~-----~~~---~~~~~v~~~~~s-dg~~l~~~s~~~ 303 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID---GE-----RVE---APQGNHGRVVLW-RGKLVTSHTSLS 303 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET---TE-----EEC---CCSSEEEEEEEE-TTEEEEEEEETT
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE---CC-----eec---cCCCceEEEEec-CCEEEEEEcCCC
Confidence 7777777 99998 7788899999999998 22 111 234678999999 999998887764
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.61 E-value=6.9e-14 Score=125.09 Aligned_cols=193 Identities=11% Similarity=0.164 Sum_probs=122.4
Q ss_pred EEEeecCCEEEEecC---CCcEEEEeCCC----cceeeecCCCCeeEEEEeCCCCEEEEEe-CCCcEEEEecCCC-CCce
Q 043707 127 YSLAASGDLLYTGSD---SKNIRVWKNLK----EFSGFKSNSGLVKAIIITGDSNKIFTGH-QDGKIRIWKVSRK-NPSV 197 (347)
Q Consensus 127 ~~l~~~~~~l~tg~~---dg~I~vwd~~~----~~~~~~~h~~~V~~l~~sp~~~~l~s~~-~Dg~I~vwd~~~~-~~~~ 197 (347)
.++.++|+ |++++. ++.|++|+... .+..+..+...+..++|+|++++|++++ .++.|++|++... ....
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 34556777 554443 68999999632 2333445677899999999999888888 7899999999643 2111
Q ss_pred eeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC-CCEEE--EEEe
Q 043707 198 HKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRIS-DCKCL--ESIN 274 (347)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~-~~~~~--~~~~ 274 (347)
......... ... ...+...+.+++|+|+++++++...++.|.+||+. +++.. ..+.
T Consensus 124 ~~~~~~~~~--------------------~p~-~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~ 182 (347)
T 3hfq_A 124 TDTVQHSGH--------------------GPR-PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT 182 (347)
T ss_dssp EEEEECCCC--------------------CSS-TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE
T ss_pred cceeecCCC--------------------CCC-ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE
Confidence 111100000 000 00133458899999999966666678899999998 55432 2333
Q ss_pred cC-CCcEEEEEeCCCC-EEE-EEeCCCcEEEEEcccCCccceeeehhhhhcc------CCcEEEEEEccCCCEEEEec
Q 043707 275 AH-DDAINSVVAGFDS-LVF-TGSADGTVKVWRRELQGKGTKHFLAQVLLKQ------ENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 275 ~h-~~~v~~i~~~~~~-~l~-s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h------~~~V~~l~~~p~~~~l~sgs 343 (347)
.+ ...+..++|+|++ +++ ++..++.|.+|++..... .......+... ...+..++|+|+|++|+++.
T Consensus 183 ~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 183 MEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred cCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 33 3367889999998 444 456789999999874211 11111111111 24689999999999885543
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.61 E-value=6.4e-14 Score=124.83 Aligned_cols=178 Identities=7% Similarity=0.054 Sum_probs=122.2
Q ss_pred EEEeecCCE-EEEecCCCcEEEEeCCCc--ceeeecC------CCCeeEEEEeCCCCEEEEEeCC------------CcE
Q 043707 127 YSLAASGDL-LYTGSDSKNIRVWKNLKE--FSGFKSN------SGLVKAIIITGDSNKIFTGHQD------------GKI 185 (347)
Q Consensus 127 ~~l~~~~~~-l~tg~~dg~I~vwd~~~~--~~~~~~h------~~~V~~l~~sp~~~~l~s~~~D------------g~I 185 (347)
.++.+++++ ++++..++.|++||.... ...+... ...+.+++|+|++++|++++.+ +.|
T Consensus 48 ~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 48 AMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEE
T ss_pred eEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeE
Confidence 455567775 456667899999996533 3333322 2237899999999999999866 899
Q ss_pred EEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 043707 186 RIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRIS 265 (347)
Q Consensus 186 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~ 265 (347)
.+||+.+++....... ..+...+.+++|+|+++ +++++ +.|.+||+.
T Consensus 128 ~~~d~~~~~~~~~~~~------------------------------~~~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~ 174 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRT------------------------------FPMPRQVYLMRAADDGS-LYVAG--PDIYKMDVK 174 (349)
T ss_dssp EEEEGGGGGGBCCSEE------------------------------EECCSSCCCEEECTTSC-EEEES--SSEEEECTT
T ss_pred EEEECCCccccceeee------------------------------ccCCCcccceeECCCCc-EEEcc--CcEEEEeCC
Confidence 9999987542211110 12444688899999999 66654 349999999
Q ss_pred CCEEEEEEecCC--------------------------------------------------------------------
Q 043707 266 DCKCLESINAHD-------------------------------------------------------------------- 277 (347)
Q Consensus 266 ~~~~~~~~~~h~-------------------------------------------------------------------- 277 (347)
+++.+..+..+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (349)
T 1jmx_B 175 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLT 254 (349)
T ss_dssp TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECS
T ss_pred CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCC
Confidence 988877765332
Q ss_pred CcEEEEEeCC-CC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 278 DAINSVVAGF-DS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 278 ~~v~~i~~~~-~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
..+..++++| ++ +++++ ++.|.+||+..... ...+. ....+.+++|+|++++|++++.++
T Consensus 255 ~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~------~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKL------IKAAN-LDHTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEE------EEEEE-CSSCCCEEEECSSSSCEEEESBSS
T ss_pred CcceeeEecCCCCCEEEEE--cCeEEEEECccCeE------EEEEc-CCCCccceEECCCCCEEEEecCCC
Confidence 1344567778 87 66666 89999999975431 22222 233577999999999888877665
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.60 E-value=1.2e-14 Score=142.57 Aligned_cols=200 Identities=9% Similarity=0.080 Sum_probs=133.9
Q ss_pred ccEEEEeecC-CEEEEecCCCcEEEEeCCC-cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCC-----CCCc
Q 043707 124 GHIYSLAASG-DLLYTGSDSKNIRVWKNLK-EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSR-----KNPS 196 (347)
Q Consensus 124 ~~V~~l~~~~-~~l~tg~~dg~I~vwd~~~-~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~-----~~~~ 196 (347)
..|.+++++. +.++.+ .++.|++||... ....+..+...+.+++|+|+|++|+++ .|+.|++||+.+ ++..
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcE
Confidence 3477776643 444444 359999999754 344555677789999999999999985 689999999987 5432
Q ss_pred eeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe----------------------
Q 043707 197 VHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS---------------------- 254 (347)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s---------------------- 254 (347)
........ .+. ... . ....+...+.+++|+||+++|++++
T Consensus 160 ~~~~~~~~----~~~-~g~------------~-~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~ 221 (706)
T 2z3z_A 160 AVTIDGTE----TLV-YGQ------------A-VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESK 221 (706)
T ss_dssp ESCSCCBT----TEE-ESS------------C-CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEE
T ss_pred EeccCCCC----CeE-ccc------------c-hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceE
Confidence 21111000 000 000 0 0011234468899999999999987
Q ss_pred -----------CCCcEEEEeCCCCEEEEEEe--cCCCcEEEEEeCCCC-EEEEEeCCC-----cEEEEEcccCCccceee
Q 043707 255 -----------WDKTLKVWRISDCKCLESIN--AHDDAINSVVAGFDS-LVFTGSADG-----TVKVWRRELQGKGTKHF 315 (347)
Q Consensus 255 -----------~dg~i~vwdl~~~~~~~~~~--~h~~~v~~i~~~~~~-~l~s~~~dg-----~I~vwd~~~~~~~~~~~ 315 (347)
.+..|++||+.+++...... .|...+..++|+||+ .|++++.++ .|++||+..+.. ...
T Consensus 222 ~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~--~~~ 299 (706)
T 2z3z_A 222 PLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF--VRT 299 (706)
T ss_dssp EECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE--EEE
T ss_pred EeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce--eeE
Confidence 45779999999988654442 467789999999998 677777665 999999975422 001
Q ss_pred ehhhhhccC---CcEEEEEEcc--CCCEEEEecCCCC
Q 043707 316 LAQVLLKQE---NAITALAVNQ--ESAVVYCGSSDGL 347 (347)
Q Consensus 316 ~~~~~~~h~---~~V~~l~~~p--~~~~l~sgs~DG~ 347 (347)
+.. ..+. ..+..++|+| +|++|++++.||+
T Consensus 300 ~~~--~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 300 LFV--ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp EEE--EECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred EEE--ccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 110 1122 1346789999 9999999988763
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.59 E-value=5.2e-15 Score=145.51 Aligned_cols=180 Identities=7% Similarity=0.025 Sum_probs=123.5
Q ss_pred EEeecCCEEEEecCCCcEEEEeCCC--cceeeecCCC---CeeEEEEeCCCCEEEEEeC---------CCcEEEEecCCC
Q 043707 128 SLAASGDLLYTGSDSKNIRVWKNLK--EFSGFKSNSG---LVKAIIITGDSNKIFTGHQ---------DGKIRIWKVSRK 193 (347)
Q Consensus 128 ~l~~~~~~l~tg~~dg~I~vwd~~~--~~~~~~~h~~---~V~~l~~sp~~~~l~s~~~---------Dg~I~vwd~~~~ 193 (347)
++.+++++++++ .|+.|++||... ....+..|.. .|.+++|+|||++|++++. |+.|++||+.++
T Consensus 22 ~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g 100 (719)
T 1z68_A 22 NWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG 100 (719)
T ss_dssp EESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred EECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC
Confidence 344556445544 589999999653 2333333332 3899999999999999876 789999999887
Q ss_pred CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Q 043707 194 NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESI 273 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~ 273 (347)
+...... ....+..++|+|||+.|+.+. |+.|++||+.++++....
T Consensus 101 ~~~~~~~---------------------------------l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~ 146 (719)
T 1z68_A 101 EFVRGNE---------------------------------LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQIT 146 (719)
T ss_dssp EECCSSC---------------------------------CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECC
T ss_pred cccccee---------------------------------cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEe
Confidence 5311011 124577899999999999886 789999999888765432
Q ss_pred -ecCCCcE-----------------EEEEeCCCC-EEEEEeCCC----------------------------------cE
Q 043707 274 -NAHDDAI-----------------NSVVAGFDS-LVFTGSADG----------------------------------TV 300 (347)
Q Consensus 274 -~~h~~~v-----------------~~i~~~~~~-~l~s~~~dg----------------------------------~I 300 (347)
.++...| .++.|+||| .|+.++.|. .|
T Consensus 147 ~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l 226 (719)
T 1z68_A 147 FNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI 226 (719)
T ss_dssp CCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred cCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence 2222222 489999998 777776542 78
Q ss_pred EEEEcccCCcc--ceeeehhhhhccCCcEEEEEEccCCCEEEEe
Q 043707 301 KVWRRELQGKG--TKHFLAQVLLKQENAITALAVNQESAVVYCG 342 (347)
Q Consensus 301 ~vwd~~~~~~~--~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sg 342 (347)
++||+...... ........+..|...+..++|+||++++++.
T Consensus 227 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~ 270 (719)
T 1z68_A 227 FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQW 270 (719)
T ss_dssp EEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEE
T ss_pred EEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEE
Confidence 89998743210 0111113456788899999999998777664
No 157
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=1.4e-12 Score=113.97 Aligned_cols=224 Identities=10% Similarity=0.064 Sum_probs=149.2
Q ss_pred cceeEeeeeccccEEEEee--cCC-EEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEe
Q 043707 113 NGLIGSIVRKEGHIYSLAA--SGD-LLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWK 189 (347)
Q Consensus 113 ~~~i~~l~~h~~~V~~l~~--~~~-~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd 189 (347)
...+..+..+.....++.+ +++ +++++..++.|++|+.......+..+...+.+++++++++++++...++.|.+||
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 3344555555455555554 577 7888999999999997655666777778899999999998887777778999999
Q ss_pred cCCCCCceeeee------------cccccccceEEe----cc-------------CCCeEEEEee-cceeeeeecCCCee
Q 043707 190 VSRKNPSVHKRV------------GSLPTFKDYVKS----SV-------------NPKNYVEVRR-NRNVLKIRHYDAVS 239 (347)
Q Consensus 190 ~~~~~~~~~~~~------------~~~~~~~~~~~~----~~-------------~~~~~~~~~~-~~~~~~~~h~~~V~ 239 (347)
..+++....... ...+.. .++.. .. ....++.+.. ........+.....
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~ 175 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPN 175 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCc
Confidence 977753222110 011111 12221 00 0112333322 12222334566778
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCC-CCEE---EEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceee
Q 043707 240 CLSLNAEQGLLYSGSWDKTLKVWRIS-DCKC---LESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHF 315 (347)
Q Consensus 240 ~l~~~~~~~~l~s~s~dg~i~vwdl~-~~~~---~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~ 315 (347)
.++|+|+++.|++.+.++.|.+||+. +++. ...+..+...+..+++.++|.|.++. ++.|.+|+.. ++
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~--g~----- 247 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD--GD----- 247 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT--SC-----
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC--CC-----
Confidence 99999999988777778999999986 4544 33343455567789999999665555 8899999986 22
Q ss_pred ehhhhhccCCcEEEEEE-ccCCCEEEEecCCC
Q 043707 316 LAQVLLKQENAITALAV-NQESAVVYCGSSDG 346 (347)
Q Consensus 316 ~~~~~~~h~~~V~~l~~-~p~~~~l~sgs~DG 346 (347)
....+..+.. +++++| .|+++.|++++.+|
T Consensus 248 ~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 248 ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp EEEEEECSSC-CCEEEEESTTSCEEEEEETTE
T ss_pred EEEEEECCCC-ceeEEEECCCCCEEEEEcCCe
Confidence 3344445555 899999 58999999888765
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.54 E-value=3.8e-14 Score=139.32 Aligned_cols=190 Identities=10% Similarity=0.029 Sum_probs=124.0
Q ss_pred EEEeecCCEEEEecC---------CCcEEEEeCCCccee-eecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCc
Q 043707 127 YSLAASGDLLYTGSD---------SKNIRVWKNLKEFSG-FKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPS 196 (347)
Q Consensus 127 ~~l~~~~~~l~tg~~---------dg~I~vwd~~~~~~~-~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~ 196 (347)
.+++++|++|+.++. ++.|++||....... .......+..++|+|||+.|+.+. |+.|++||+.+++..
T Consensus 65 ~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~ 143 (719)
T 1z68_A 65 YGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPF 143 (719)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred EEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcE
Confidence 345567889988876 789999996543220 011135688999999999999886 789999999887642
Q ss_pred eeeeecccccccceEEeccCCCeEEEEeecceeeeeecCC---------CeeEEEEcCCCCEEEEEeCCC----------
Q 043707 197 VHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYD---------AVSCLSLNAEQGLLYSGSWDK---------- 257 (347)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---------~V~~l~~~~~~~~l~s~s~dg---------- 257 (347)
.....+. ...+..++.+ ...+++|+|||+.|+.++.|.
T Consensus 144 ~l~~~~~-----------------------~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~ 200 (719)
T 1z68_A 144 QITFNGR-----------------------ENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSY 200 (719)
T ss_dssp ECCCCCB-----------------------TTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEE
T ss_pred EEecCCC-----------------------cCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeec
Confidence 2111000 0001112322 235899999999999987652
Q ss_pred ------------------------cEEEEeCCCCEEE--------EEEecCCCcEEEEEeCCCCE-EEEEeC--C--CcE
Q 043707 258 ------------------------TLKVWRISDCKCL--------ESINAHDDAINSVVAGFDSL-VFTGSA--D--GTV 300 (347)
Q Consensus 258 ------------------------~i~vwdl~~~~~~--------~~~~~h~~~v~~i~~~~~~~-l~s~~~--d--g~I 300 (347)
.|++||+.+++.+ ..+..|...+..++|+||+. +++... + ..|
T Consensus 201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL 280 (719)
T ss_dssp CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence 7889999887642 11335788899999999994 444322 2 247
Q ss_pred EEEE----cccCCccceeeehhhh----hccCCcEE-----EEEEccCCCEEEE--ecCCC
Q 043707 301 KVWR----RELQGKGTKHFLAQVL----LKQENAIT-----ALAVNQESAVVYC--GSSDG 346 (347)
Q Consensus 301 ~vwd----~~~~~~~~~~~~~~~~----~~h~~~V~-----~l~~~p~~~~l~s--gs~DG 346 (347)
.+|| +..+. ....+ ..|...|. .++|+|||+.|+. +..||
T Consensus 281 ~~~d~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g 335 (719)
T 1z68_A 281 SICDFREDWQTWD------CPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG 335 (719)
T ss_dssp EEEEECSSSSSEE------CCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS
T ss_pred EEEcccCCCCCCc------eEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC
Confidence 8888 54321 23333 35666666 8899999986554 44444
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.52 E-value=5.4e-13 Score=120.46 Aligned_cols=189 Identities=10% Similarity=0.096 Sum_probs=123.2
Q ss_pred EEEeecCCEEEEecCCCcEEEEeCC-C-cceeeecC--CCCeeEEEEeCCCCE--EEEEe-------------CCCcEEE
Q 043707 127 YSLAASGDLLYTGSDSKNIRVWKNL-K-EFSGFKSN--SGLVKAIIITGDSNK--IFTGH-------------QDGKIRI 187 (347)
Q Consensus 127 ~~l~~~~~~l~tg~~dg~I~vwd~~-~-~~~~~~~h--~~~V~~l~~sp~~~~--l~s~~-------------~Dg~I~v 187 (347)
.++.+++++|++++.+ .|.+|+.. . .+.....+ .+.+.+++|+|+|++ ++++. .+|.+++
T Consensus 45 ~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 45 MTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 3456678889888887 99999853 2 22211111 134667899999984 55553 6899999
Q ss_pred EecCC-CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCC
Q 043707 188 WKVSR-KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-DKTLKVWRIS 265 (347)
Q Consensus 188 wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-dg~i~vwdl~ 265 (347)
|++.. ++....... ....+...+.+++|+|++++|+++.. ++.|++||+.
T Consensus 124 ~~~~~~g~~~~~~~~----------------------------~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~ 175 (365)
T 1jof_A 124 FSVSETGKLEKNVQN----------------------------YEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKL 175 (365)
T ss_dssp EEECTTCCEEEEEEE----------------------------EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EccCCCCcCcceEee----------------------------EEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEEC
Confidence 99974 331111000 00024567899999999998888764 6799999998
Q ss_pred -CCEEE--EEEe--cCCCcEEEEEeCCCC-EEEEEe-CCCcEEEEEcccCCccce--eeehhhhh----ccCC------c
Q 043707 266 -DCKCL--ESIN--AHDDAINSVVAGFDS-LVFTGS-ADGTVKVWRRELQGKGTK--HFLAQVLL----KQEN------A 326 (347)
Q Consensus 266 -~~~~~--~~~~--~h~~~v~~i~~~~~~-~l~s~~-~dg~I~vwd~~~~~~~~~--~~~~~~~~----~h~~------~ 326 (347)
+++.. ..+. .|...+..++|+|++ ++++++ .++.|.+|++........ ...+..+. +|.. .
T Consensus 176 ~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 255 (365)
T 1jof_A 176 ASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLY 255 (365)
T ss_dssp TTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSE
T ss_pred CCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccc
Confidence 67543 3444 245678999999998 666665 478999998763211000 01111221 2232 5
Q ss_pred EEEEE-EccCCCEEEEecC
Q 043707 327 ITALA-VNQESAVVYCGSS 344 (347)
Q Consensus 327 V~~l~-~~p~~~~l~sgs~ 344 (347)
+..++ |+|||++|+++..
T Consensus 256 ~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 256 RADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEEECTTSSEEEEEEE
T ss_pred cccEEEECCCCCEEEEECC
Confidence 89999 9999999887653
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.51 E-value=4.6e-13 Score=132.19 Aligned_cols=193 Identities=9% Similarity=0.034 Sum_probs=125.2
Q ss_pred EEEeecCCEEEEecCC---------CcEEEEeCCC-cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCc
Q 043707 127 YSLAASGDLLYTGSDS---------KNIRVWKNLK-EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPS 196 (347)
Q Consensus 127 ~~l~~~~~~l~tg~~d---------g~I~vwd~~~-~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~ 196 (347)
..++++|++|+.++.+ +.+++||... ....+..|.+.+...+|+|||+.|+.+. |+.|++|++.+++..
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSY 145 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCE
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceE
Confidence 5667889999998876 5667999664 3455667778899999999999999885 789999999887632
Q ss_pred eeeeecccccccceEEeccCCCeEEEEeecceeeeeecC---------CCeeEEEEcCCCCEEEEEeCCC----------
Q 043707 197 VHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHY---------DAVSCLSLNAEQGLLYSGSWDK---------- 257 (347)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~V~~l~~~~~~~~l~s~s~dg---------- 257 (347)
.....+.. .....++. .....+.|+|||+.|+..+.|.
T Consensus 146 ~lt~~g~~-----------------------~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~ 202 (740)
T 4a5s_A 146 RITWTGKE-----------------------DIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSF 202 (740)
T ss_dssp ECCSCCBT-----------------------TTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEE
T ss_pred EEcCCCCc-----------------------cceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEe
Confidence 21111100 00001122 2234578899988888765322
Q ss_pred --------------------------cEEEEeCCC---CE--EEEEEe------cCCCcEEEEEeCCCCE-EEEEe----
Q 043707 258 --------------------------TLKVWRISD---CK--CLESIN------AHDDAINSVVAGFDSL-VFTGS---- 295 (347)
Q Consensus 258 --------------------------~i~vwdl~~---~~--~~~~~~------~h~~~v~~i~~~~~~~-l~s~~---- 295 (347)
+|++||+.+ ++ ....+. .|...+..++|+||+. ++...
T Consensus 203 ~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~ 282 (740)
T 4a5s_A 203 YSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ 282 (740)
T ss_dssp CCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST
T ss_pred ecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC
Confidence 588899988 73 223343 3778899999999993 44332
Q ss_pred CCCcEEEEEcccCCccceeeehhhh--hccCCcEE-----EEEEccCCCEEE-Eec
Q 043707 296 ADGTVKVWRRELQGKGTKHFLAQVL--LKQENAIT-----ALAVNQESAVVY-CGS 343 (347)
Q Consensus 296 ~dg~I~vwd~~~~~~~~~~~~~~~~--~~h~~~V~-----~l~~~p~~~~l~-sgs 343 (347)
.+..|++||+.++...........+ ..|...|. .++|+|||+.|+ ..+
T Consensus 283 ~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s 338 (740)
T 4a5s_A 283 NYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338 (740)
T ss_dssp TEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE
T ss_pred CEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE
Confidence 2347999999865410001112222 34555544 789999999876 554
No 161
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.51 E-value=9.1e-13 Score=118.92 Aligned_cols=171 Identities=11% Similarity=-0.009 Sum_probs=122.8
Q ss_pred EEEeecCCEEEEecCCCcEEEEeCCCc------------ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCC
Q 043707 127 YSLAASGDLLYTGSDSKNIRVWKNLKE------------FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKN 194 (347)
Q Consensus 127 ~~l~~~~~~l~tg~~dg~I~vwd~~~~------------~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~ 194 (347)
.++.....++++|+.++ +++|+.... ......+.. |..|+| ++++|+++ .++.|++||+.+..
T Consensus 43 Lais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~ 117 (388)
T 1xip_A 43 LDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS 117 (388)
T ss_dssp EEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT
T ss_pred EEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh
Confidence 36666788999999885 666973211 112234566 999999 88899999 88999999998765
Q ss_pred CceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEe
Q 043707 195 PSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESIN 274 (347)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~ 274 (347)
...... .|...+..+.+.+. .++++..||.|.+||+.+++...
T Consensus 118 ~~~~~~--------------------------------~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~--- 160 (388)
T 1xip_A 118 EFRTVT--------------------------------SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ--- 160 (388)
T ss_dssp CEEEEE--------------------------------ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---
T ss_pred ccCccc--------------------------------eeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---
Confidence 322111 25556667666554 38888999999999999887643
Q ss_pred cCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCc--cceeeehhhhh---ccCCcEEEEEEccCCCEEEE
Q 043707 275 AHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGK--GTKHFLAQVLL---KQENAITALAVNQESAVVYC 341 (347)
Q Consensus 275 ~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~--~~~~~~~~~~~---~h~~~V~~l~~~p~~~~l~s 341 (347)
+...|+|++|+|+| ++.|..||.|++|+...... .........+. +|...|.+|.|.+++.+|++
T Consensus 161 -~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 161 -LAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp -EEESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred -ccCCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 34579999999999 67899999999998875441 00111112223 47789999999999988876
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.51 E-value=3.7e-12 Score=114.52 Aligned_cols=174 Identities=8% Similarity=0.121 Sum_probs=115.2
Q ss_pred EEeecCCEEE-EecCCCcEEEEeCCCc--------c-------eeeecCCCCeeEEEEeCCCCEEEEEe-CCCcEEEEec
Q 043707 128 SLAASGDLLY-TGSDSKNIRVWKNLKE--------F-------SGFKSNSGLVKAIIITGDSNKIFTGH-QDGKIRIWKV 190 (347)
Q Consensus 128 ~l~~~~~~l~-tg~~dg~I~vwd~~~~--------~-------~~~~~h~~~V~~l~~sp~~~~l~s~~-~Dg~I~vwd~ 190 (347)
++.++|++|+ ++..++.|++|+.... + .....+...+..++|+|+++++++++ .++.|.+||+
T Consensus 161 ~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 161 RITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEe
Confidence 4455787554 4555889999974421 1 11123345678999999999887777 6899999999
Q ss_pred CCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC--CcEEEEeCC--C
Q 043707 191 SRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD--KTLKVWRIS--D 266 (347)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d--g~i~vwdl~--~ 266 (347)
.+++......+...+ .+...+..++|+|++++|+++..+ +.|.+|++. +
T Consensus 241 ~~g~~~~~~~~~~~~---------------------------~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 241 ADGMLDEIQTVAADT---------------------------VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp ETTEEEEEEEEESCS---------------------------SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred cCCceEEeEEEecCC---------------------------CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 865422221111111 134556899999999998777665 899999995 3
Q ss_pred CE--EEEEEecCCCcEEEEEeCCCC-EEEEEe-CCCcEEEEEcccCCccceeeehhhh-hccCCcEEEEEEc
Q 043707 267 CK--CLESINAHDDAINSVVAGFDS-LVFTGS-ADGTVKVWRRELQGKGTKHFLAQVL-LKQENAITALAVN 333 (347)
Q Consensus 267 ~~--~~~~~~~h~~~v~~i~~~~~~-~l~s~~-~dg~I~vwd~~~~~~~~~~~~~~~~-~~h~~~V~~l~~~ 333 (347)
++ .+..+.. ...+..++|+|++ +|++++ .++.|.+|++..... .+.... ..+...+.||+|.
T Consensus 294 g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g----~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 294 GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG----LLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC----CEEECSCCEECSSEEEEEEE
T ss_pred CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC----cEeecceeeeCCCCeEEEEc
Confidence 44 4555555 5678899999998 666666 689999987753221 011111 2244578899886
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.50 E-value=6.5e-13 Score=129.25 Aligned_cols=176 Identities=10% Similarity=0.071 Sum_probs=122.0
Q ss_pred ecCCE-EEEec-CCCcEEEEeCC----Ccceeeec-----CCCCeeEEEEeCCCCEEEEEeCC----------CcEEEEe
Q 043707 131 ASGDL-LYTGS-DSKNIRVWKNL----KEFSGFKS-----NSGLVKAIIITGDSNKIFTGHQD----------GKIRIWK 189 (347)
Q Consensus 131 ~~~~~-l~tg~-~dg~I~vwd~~----~~~~~~~~-----h~~~V~~l~~sp~~~~l~s~~~D----------g~I~vwd 189 (347)
++|++ |+... .+..|++|+.. .....+.. |...+.+++|+|||+.|+.++.| ..|++||
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 67887 66554 36778888865 55555555 66788999999999999999877 5899999
Q ss_pred cCC------CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCC------
Q 043707 190 VSR------KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDK------ 257 (347)
Q Consensus 190 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg------ 257 (347)
+.+ ++..... . .+...+..++|+|||++|+.++.++
T Consensus 168 ~~~~~~~~~~~~~~l~--~------------------------------~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~ 215 (662)
T 3azo_A 168 LDGSAAADRSAVRELS--D------------------------------DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWE 215 (662)
T ss_dssp TTSTTTTCGGGSEESS--C------------------------------SCSSEECCCEECTTSSEEEEEEECTTCCTTT
T ss_pred CCCCccccCCceeEEE--e------------------------------cCCCcccCceECCCCCEEEEEECCCCCCCCC
Confidence 987 3321100 0 1345677789999999998877553
Q ss_pred --cEEEEeCC-CC---EEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCc--EEEEEcccCCccceeeehhhhhccCCc--
Q 043707 258 --TLKVWRIS-DC---KCLESINAHDDAINSVVAGFDS-LVFTGSADGT--VKVWRRELQGKGTKHFLAQVLLKQENA-- 326 (347)
Q Consensus 258 --~i~vwdl~-~~---~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~--I~vwd~~~~~~~~~~~~~~~~~~h~~~-- 326 (347)
.|++||+. ++ +.......|...+..+.|+||+ +++++..++. |.+||+..+. .......+...
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~------~~~l~~~~~~~~~ 289 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA------ATQLCRREEEFAG 289 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC------EEESSCCSSBSSC
T ss_pred CcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc------eeecccccccccC
Confidence 79999998 56 4444445567889999999998 6777778884 4455543221 11111122111
Q ss_pred ------EEEEEEccCCCEEEEecC
Q 043707 327 ------ITALAVNQESAVVYCGSS 344 (347)
Q Consensus 327 ------V~~l~~~p~~~~l~sgs~ 344 (347)
+..++|+|+++++++++.
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBS
T ss_pred ccccccCceEeEeCCCEEEEEEEc
Confidence 567899999999988865
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.49 E-value=1.4e-12 Score=117.75 Aligned_cols=175 Identities=9% Similarity=0.032 Sum_probs=114.4
Q ss_pred CCCcEEEEeCCC---cceeee----cCCCCeeEEEEeCCCCEEEEEeC-CCcEEEEecC-CCCCceeeeecccccccceE
Q 043707 141 DSKNIRVWKNLK---EFSGFK----SNSGLVKAIIITGDSNKIFTGHQ-DGKIRIWKVS-RKNPSVHKRVGSLPTFKDYV 211 (347)
Q Consensus 141 ~dg~I~vwd~~~---~~~~~~----~h~~~V~~l~~sp~~~~l~s~~~-Dg~I~vwd~~-~~~~~~~~~~~~~~~~~~~~ 211 (347)
.+|.+.+|+... ....+. .+...+.+++|+|+|++|+++.. ++.|++||+. +++........
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~--------- 187 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD--------- 187 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE---------
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEe---------
Confidence 689999998642 222222 24567999999999998887764 6799999998 55421111100
Q ss_pred EeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCC--CCEEE---EEEec-------CCC
Q 043707 212 KSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-DKTLKVWRIS--DCKCL---ESINA-------HDD 278 (347)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-dg~i~vwdl~--~~~~~---~~~~~-------h~~ 278 (347)
...|...+..++|+|++++|++++. +++|.+|++. +++.. ..+.. |..
T Consensus 188 -------------------~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~ 248 (365)
T 1jof_A 188 -------------------APDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDP 248 (365)
T ss_dssp -------------------CSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCT
T ss_pred -------------------cCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccc
Confidence 0013566889999999999988775 7899999765 55542 22321 122
Q ss_pred ------cEEEEE-eCCCC-EEEEEeCC-C-----cEEEEEcccCCccceeeehhhhhccCCcEEEEEEcc---CCCEEEE
Q 043707 279 ------AINSVV-AGFDS-LVFTGSAD-G-----TVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQ---ESAVVYC 341 (347)
Q Consensus 279 ------~v~~i~-~~~~~-~l~s~~~d-g-----~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p---~~~~l~s 341 (347)
.+..++ |+||+ +|+++..+ + .|.+|++...++ ..........+...+..++|+| +|++|++
T Consensus 249 ~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~--~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v 326 (365)
T 1jof_A 249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS--IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAI 326 (365)
T ss_dssp TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC--EEEEEEEEECSSCCTTCCCEEECTTCTTEEEE
T ss_pred ccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC--EEEeeeeeecCCCCcccceecCCCcCCCEEEE
Confidence 588999 99998 66655432 2 899999963222 1110111222444567899999 8999999
Q ss_pred ecCC
Q 043707 342 GSSD 345 (347)
Q Consensus 342 gs~D 345 (347)
++.+
T Consensus 327 ~~~~ 330 (365)
T 1jof_A 327 TDDQ 330 (365)
T ss_dssp ECSS
T ss_pred EEcC
Confidence 8765
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.48 E-value=5.6e-13 Score=118.70 Aligned_cols=152 Identities=11% Similarity=0.140 Sum_probs=104.9
Q ss_pred EeecCCEEEEecCCCcEEEEeCCCc--ceeeecCC-CCeeEEEEeCCCCEEE-EEeCCCcEEEEecCCCCCceeeeeccc
Q 043707 129 LAASGDLLYTGSDSKNIRVWKNLKE--FSGFKSNS-GLVKAIIITGDSNKIF-TGHQDGKIRIWKVSRKNPSVHKRVGSL 204 (347)
Q Consensus 129 l~~~~~~l~tg~~dg~I~vwd~~~~--~~~~~~h~-~~V~~l~~sp~~~~l~-s~~~Dg~I~vwd~~~~~~~~~~~~~~~ 204 (347)
+..++.++++++.++.|++||.... ...+..+. ..+..++|+|++++++ ++..++.|.+||+.+++..........
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 3445678999999999999996533 34444332 2578999999998655 555789999999987753322211100
Q ss_pred ccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC------------CcEEEEeCCCC---EE
Q 043707 205 PTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD------------KTLKVWRISDC---KC 269 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d------------g~i~vwdl~~~---~~ 269 (347)
+. .....+..++|+|++++|++++.+ +.|.+||+.++ +.
T Consensus 87 ~~--------------------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 140 (349)
T 1jmx_B 87 PG--------------------------EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP 140 (349)
T ss_dssp TT--------------------------EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC
T ss_pred cc--------------------------cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccce
Confidence 00 002336789999999999998865 89999999874 33
Q ss_pred EEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCC
Q 043707 270 LESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 270 ~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~ 309 (347)
+..+..+ ..+.+++|+|++.+++++. .|.+||+....
T Consensus 141 ~~~~~~~-~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~~ 177 (349)
T 1jmx_B 141 VRTFPMP-RQVYLMRAADDGSLYVAGP--DIYKMDVKTGK 177 (349)
T ss_dssp SEEEECC-SSCCCEEECTTSCEEEESS--SEEEECTTTCC
T ss_pred eeeccCC-CcccceeECCCCcEEEccC--cEEEEeCCCCc
Confidence 4445433 3588899999986555543 49999987543
No 166
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.47 E-value=7.4e-12 Score=110.70 Aligned_cols=176 Identities=11% Similarity=0.119 Sum_probs=118.9
Q ss_pred EEeecCCEEEEec------------CCCcEEEEeCCCc--ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCC
Q 043707 128 SLAASGDLLYTGS------------DSKNIRVWKNLKE--FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 128 ~l~~~~~~l~tg~------------~dg~I~vwd~~~~--~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~ 193 (347)
++.+++++|+++. .++.|++||.... ...+.. ...+.+++|+|++++|+++ ++.|++||+.++
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~ 164 (337)
T 1pby_B 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAG 164 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTT
T ss_pred EECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCC
Confidence 4556788888885 5799999997543 333332 4568899999999988888 689999999887
Q ss_pred CCceeeeecc-------cccccceEEeccCCCeE-------------------------EEEeecce--eeeeecCCCee
Q 043707 194 NPSVHKRVGS-------LPTFKDYVKSSVNPKNY-------------------------VEVRRNRN--VLKIRHYDAVS 239 (347)
Q Consensus 194 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~--~~~~~h~~~V~ 239 (347)
+......... .+....++........+ ++...... .....+...+.
T Consensus 165 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 244 (337)
T 1pby_B 165 TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYF 244 (337)
T ss_dssp EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEE
T ss_pred cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCcee
Confidence 6433222211 01111111111111111 11111111 11223556788
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCC
Q 043707 240 CLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 240 ~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~ 309 (347)
+++|+|++++|+++ ++.|.+||+.+++.+..+..+ ..+.+++|+|++ +|++++.++.|++||+....
T Consensus 245 ~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 245 STAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred eEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 89999999999988 799999999999998888754 457899999998 78888889999999997554
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.47 E-value=1.1e-11 Score=111.67 Aligned_cols=217 Identities=14% Similarity=0.127 Sum_probs=135.8
Q ss_pred ceeEeeeeccccEEEEeecCCEEEEec----------CCCcEEEEeCCC--cceeeec------CCCCeeEEEEeCCCCE
Q 043707 114 GLIGSIVRKEGHIYSLAASGDLLYTGS----------DSKNIRVWKNLK--EFSGFKS------NSGLVKAIIITGDSNK 175 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~~~l~tg~----------~dg~I~vwd~~~--~~~~~~~------h~~~V~~l~~sp~~~~ 175 (347)
+++..+..+..+-.++++++++|+++. .++.|.+||... ....+.. +......++++|+|++
T Consensus 42 ~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 42 KFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp CEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred eEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 345566555555446667899888876 367899999653 3334432 2345778999999999
Q ss_pred EEEEeC--CCcEEEEecCCCCCcee-eeecc------cccc-cceEEeccCCCeEE-EEee-------------------
Q 043707 176 IFTGHQ--DGKIRIWKVSRKNPSVH-KRVGS------LPTF-KDYVKSSVNPKNYV-EVRR------------------- 225 (347)
Q Consensus 176 l~s~~~--Dg~I~vwd~~~~~~~~~-~~~~~------~~~~-~~~~~~~~~~~~~~-~~~~------------------- 225 (347)
|+++.. ++.|.+||+.+++.... ..... .|.. ..++....++...+ ....
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~ 201 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDD 201 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTS
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCC
Confidence 998874 58999999988754332 11110 1111 11111111111100 0000
Q ss_pred ------------------cceeeeeec------------------------CCCeeEEEEcCCCCEEEEEeC--------
Q 043707 226 ------------------NRNVLKIRH------------------------YDAVSCLSLNAEQGLLYSGSW-------- 255 (347)
Q Consensus 226 ------------------~~~~~~~~h------------------------~~~V~~l~~~~~~~~l~s~s~-------- 255 (347)
........- ......++|+|+++.++++..
T Consensus 202 ~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~ 281 (361)
T 2oiz_A 202 PIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTH 281 (361)
T ss_dssp CBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCT
T ss_pred ceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccc
Confidence 000000000 001112788999888877643
Q ss_pred ---CCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEE
Q 043707 256 ---DKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALA 331 (347)
Q Consensus 256 ---dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~ 331 (347)
+++|.+||+.+++.+.++..+. +..|+|+||+ +|++++. +.|.+||..+... ..+..+..+......++
T Consensus 282 ~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l----~~~~~i~~~G~~P~~~~ 354 (361)
T 2oiz_A 282 KFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEP----KLLRTIEGAAEASLQVQ 354 (361)
T ss_dssp TCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSC----EEEEEETTSCSSEEEEE
T ss_pred cCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcc----eeeEEeccCCCCcEEEE
Confidence 3479999999999999999887 8999999998 7777776 9999999986410 13455455667788999
Q ss_pred EccCCC
Q 043707 332 VNQESA 337 (347)
Q Consensus 332 ~~p~~~ 337 (347)
++|+|+
T Consensus 355 ~~p~G~ 360 (361)
T 2oiz_A 355 FHPVGG 360 (361)
T ss_dssp ECCCSC
T ss_pred ecCCCC
Confidence 999985
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.46 E-value=7e-13 Score=130.92 Aligned_cols=178 Identities=9% Similarity=0.046 Sum_probs=119.3
Q ss_pred EeecCCEEEEecCCCcEEEEeCC--CcceeeecCCC-----CeeEEEEeCCCCEEEEEeCC---------CcEEEEecCC
Q 043707 129 LAASGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSG-----LVKAIIITGDSNKIFTGHQD---------GKIRIWKVSR 192 (347)
Q Consensus 129 l~~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~-----~V~~l~~sp~~~~l~s~~~D---------g~I~vwd~~~ 192 (347)
+.+++++++++ ||+|++||.. +....+..|.. ....++|+|||++|+.++.+ +.+.+||+.+
T Consensus 24 w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~ 101 (740)
T 4a5s_A 24 WISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNK 101 (740)
T ss_dssp ECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCC
Confidence 33457788886 8999999954 33444555543 23458999999999999876 5567999998
Q ss_pred CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Q 043707 193 KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLES 272 (347)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~ 272 (347)
++.... ..|...+...+|+|||+.|+.+. |+.|++||+.+++....
T Consensus 102 ~~~~~l---------------------------------~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 102 RQLITE---------------------------------ERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp TEECCS---------------------------------SCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC
T ss_pred CcEEEc---------------------------------ccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEE
Confidence 753211 12667799999999999998885 78999999988764432
Q ss_pred -EecCCCcE-----------------EEEEeCCCC-EEEEEeCCC-----------------------------------
Q 043707 273 -INAHDDAI-----------------NSVVAGFDS-LVFTGSADG----------------------------------- 298 (347)
Q Consensus 273 -~~~h~~~v-----------------~~i~~~~~~-~l~s~~~dg----------------------------------- 298 (347)
..++...+ ..+.|+||| .||.++.|.
T Consensus 148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~ 227 (740)
T 4a5s_A 148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPT 227 (740)
T ss_dssp CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCE
T ss_pred cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCe
Confidence 12222222 348899999 676654322
Q ss_pred -cEEEEEccc---CC--ccceeeehhhhhccCCcEEEEEEccCCCEEEEe
Q 043707 299 -TVKVWRREL---QG--KGTKHFLAQVLLKQENAITALAVNQESAVVYCG 342 (347)
Q Consensus 299 -~I~vwd~~~---~~--~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sg 342 (347)
+|++||+.. +. +.........+.+|...+..++|+|||+.++..
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~ 277 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQW 277 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEE
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEE
Confidence 477777765 31 100111111223477789999999999866654
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.42 E-value=7.2e-12 Score=113.48 Aligned_cols=190 Identities=8% Similarity=-0.038 Sum_probs=124.7
Q ss_pred ceeEeeeeccccEEE-------EeecCCEEEEecC-CCc--EEEEeCCCc--ceeeecCCCCeeEEEEeCCCCEEEEEeC
Q 043707 114 GLIGSIVRKEGHIYS-------LAASGDLLYTGSD-SKN--IRVWKNLKE--FSGFKSNSGLVKAIIITGDSNKIFTGHQ 181 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~-------l~~~~~~l~tg~~-dg~--I~vwd~~~~--~~~~~~h~~~V~~l~~sp~~~~l~s~~~ 181 (347)
+.+..+..|.+.... ++++|++|+.++. +|. |.+||.... ......+...+..++|+|+++.|+.++.
T Consensus 21 ~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 21 AQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred cceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence 345666666665544 5677888888776 674 777785432 3333445455557889999999999999
Q ss_pred CCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEE--EEcCCCCEEEEE------
Q 043707 182 DGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCL--SLNAEQGLLYSG------ 253 (347)
Q Consensus 182 Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l--~~~~~~~~l~s~------ 253 (347)
++.|++||+.+++...... .+...+... .+++++.+++..
T Consensus 101 ~~~l~~~d~~~g~~~~~~~--------------------------------~~~~~~~~~~~~~~~dg~~l~~~~~~~~~ 148 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVYQ--------------------------------VPAEWVGYGTWVANSDCTKLVGIEIRRED 148 (388)
T ss_dssp TTEEEEEETTTCCEEEEEE--------------------------------CCTTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred CCeEEEEECCCCcceeeee--------------------------------chhhcccccceeECCCCCeeccccccCcc
Confidence 9999999999876322211 122223222 347788777642
Q ss_pred ----------------eCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCC-CC-EEEEEeCC------CcEEEEEcccCC
Q 043707 254 ----------------SWDKTLKVWRISDCKCLESINAHDDAINSVVAGF-DS-LVFTGSAD------GTVKVWRRELQG 309 (347)
Q Consensus 254 ----------------s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~-~~-~l~s~~~d------g~I~vwd~~~~~ 309 (347)
..+..|.+||+.+++.. .+..+...+..+.|+| ++ .|+....+ ..|.++|+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 149 WVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp CCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred cccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 23478999999988654 3445667789999999 87 56555543 367777765321
Q ss_pred ccceeeehhhhhccC--CcEEEEEEccCCCEEEEec
Q 043707 310 KGTKHFLAQVLLKQE--NAITALAVNQESAVVYCGS 343 (347)
Q Consensus 310 ~~~~~~~~~~~~~h~--~~V~~l~~~p~~~~l~sgs 343 (347)
...+..+. ..+..++|+|||+.|+..+
T Consensus 228 -------~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 228 -------MRKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp -------CEESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred -------eEEeeeCCCCcccccceECCCCCEEEEEe
Confidence 22223333 3588899999998776544
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.41 E-value=6e-12 Score=122.44 Aligned_cols=179 Identities=6% Similarity=-0.043 Sum_probs=120.9
Q ss_pred ccccEEEEe--ecCCEEEEecCC----------CcEEEEeCCC-------cceeee-cCCCCeeEEEEeCCCCEEEEEeC
Q 043707 122 KEGHIYSLA--ASGDLLYTGSDS----------KNIRVWKNLK-------EFSGFK-SNSGLVKAIIITGDSNKIFTGHQ 181 (347)
Q Consensus 122 h~~~V~~l~--~~~~~l~tg~~d----------g~I~vwd~~~-------~~~~~~-~h~~~V~~l~~sp~~~~l~s~~~ 181 (347)
|...+.++. ++|+.|+.++.+ ..|++||... ....+. .+...+..++|+|||++|+.++.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~ 207 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAW 207 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEEC
Confidence 445555554 578889888776 5899999654 344555 56678889999999999998876
Q ss_pred CC--------cEEEEecC-CCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEE
Q 043707 182 DG--------KIRIWKVS-RKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYS 252 (347)
Q Consensus 182 Dg--------~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s 252 (347)
++ .|++||+. ++....... +..+|...+..++|+||++++++
T Consensus 208 ~~~~~~~~~~~i~~~d~~~~g~~~~~~~-----------------------------l~~~~~~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 208 DHPRMPWEGTELKTARVTEDGRFADTRT-----------------------------LLGGPEEAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp CTTCCTTTCEEEEEEEECTTSCEEEEEE-----------------------------EEEETTBCEEEEEECTTSCEEEE
T ss_pred CCCCCCCCCcEEEEEEECCCCcccccEE-----------------------------eCCCCCceEcceEECCCCeEEEE
Confidence 53 79999998 442111111 11135678899999999998888
Q ss_pred EeCCC--cEEEEeCCCCEEEEEEecCCCc--------EEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhh
Q 043707 253 GSWDK--TLKVWRISDCKCLESINAHDDA--------INSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLL 321 (347)
Q Consensus 253 ~s~dg--~i~vwdl~~~~~~~~~~~h~~~--------v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~ 321 (347)
+..++ .|.+||+.+++.......+... +..++|++++ +++++.. +.++||.+..... ....+.
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~-----~~~~l~ 332 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG-----ELVDAA 332 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT-----EEEECC
T ss_pred ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC-----cEEEec
Confidence 88888 5666777666654433333222 4678888877 7777778 9999996653322 134455
Q ss_pred ccCCcEEEE-EEccC
Q 043707 322 KQENAITAL-AVNQE 335 (347)
Q Consensus 322 ~h~~~V~~l-~~~p~ 335 (347)
.|...+..+ +++.+
T Consensus 333 ~~~~~~~~~~s~~~~ 347 (662)
T 3azo_A 333 GPWTEWAATLTVSGT 347 (662)
T ss_dssp SSCCEEEEEEEEETT
T ss_pred CCCCeEEEEEecCCC
Confidence 666677777 55433
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.38 E-value=9.3e-10 Score=97.48 Aligned_cols=227 Identities=15% Similarity=0.051 Sum_probs=134.6
Q ss_pred eeEeeeeccccEEEEee--cCCEEEEecCCCcEEEEeCCC-cceeee-cCCCCeeEEEEeCCCCEEEEEeCC----CcEE
Q 043707 115 LIGSIVRKEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLK-EFSGFK-SNSGLVKAIIITGDSNKIFTGHQD----GKIR 186 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~-~~~~~~-~h~~~V~~l~~sp~~~~l~s~~~D----g~I~ 186 (347)
.+..+..+...+.++.+ ++++++++..++.|++||... ....+. .+...+.+++++++++++++...+ +.|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 45555556566666665 477788888899999999653 233332 466789999999999887777766 6899
Q ss_pred EEecCCCCCceeee-ec---------ccccccceEEeccC------CCeEEEEeec--ceeeeeecCCCeeEEEEcCCCC
Q 043707 187 IWKVSRKNPSVHKR-VG---------SLPTFKDYVKSSVN------PKNYVEVRRN--RNVLKIRHYDAVSCLSLNAEQG 248 (347)
Q Consensus 187 vwd~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~------~~~~~~~~~~--~~~~~~~h~~~V~~l~~~~~~~ 248 (347)
+||.+++....... .. ..+.. .++..... ...++.+... .......+...+..++|+|+++
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSS
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCC
Confidence 99988775431111 00 01111 11111111 1122222111 1112222334578899999998
Q ss_pred EEEEE-eCCCcEEEEeCCC-CEEEEE--------EecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeeh
Q 043707 249 LLYSG-SWDKTLKVWRISD-CKCLES--------INAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLA 317 (347)
Q Consensus 249 ~l~s~-s~dg~i~vwdl~~-~~~~~~--------~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~ 317 (347)
.|+.+ +.++.|.+||+++ ++.+.. +..+ ..+..+++.+++ ++++...++.|.+||.. +.. ......
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~-~~~~~~ 271 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYP-IGQILI 271 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCE-EEEEEC
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC-CCE-EEEEEc
Confidence 66544 5578999999963 332211 1122 467889999988 44455567899999984 221 111100
Q ss_pred hh-hhccCCcEEEEEEccCCCEEEEecCC
Q 043707 318 QV-LLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 318 ~~-~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
.. ..+|...+.+++|+|+++.|+.++.+
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCccccccCcceEEECCCCCEEEEEeCc
Confidence 00 01223368999999998888766655
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.38 E-value=7.5e-10 Score=98.29 Aligned_cols=215 Identities=12% Similarity=0.079 Sum_probs=134.3
Q ss_pred cEEEEe--ecCCEEEEecCC------------------------CcEEEEeCC--Ccceeee-cCCCCeeEEEEeCCCCE
Q 043707 125 HIYSLA--ASGDLLYTGSDS------------------------KNIRVWKNL--KEFSGFK-SNSGLVKAIIITGDSNK 175 (347)
Q Consensus 125 ~V~~l~--~~~~~l~tg~~d------------------------g~I~vwd~~--~~~~~~~-~h~~~V~~l~~sp~~~~ 175 (347)
.+.+++ ++|+++++...+ +.|++||.. +....+. .+-.....|+++|+|+.
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l 104 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY 104 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence 344554 457788877766 479999964 2232222 23357899999999998
Q ss_pred EEEEeCCCcEEEEecCCCC-Cceeee-----------------ecccccccceEEecc-CCCeEEEEeecce-eeeee--
Q 043707 176 IFTGHQDGKIRIWKVSRKN-PSVHKR-----------------VGSLPTFKDYVKSSV-NPKNYVEVRRNRN-VLKIR-- 233 (347)
Q Consensus 176 l~s~~~Dg~I~vwd~~~~~-~~~~~~-----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~-- 233 (347)
+++...++.|++||..... ...... +...+....++.+.. ....+..+..... ....+
T Consensus 105 ~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~ 184 (329)
T 3fvz_A 105 WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEE 184 (329)
T ss_dssp EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccC
Confidence 8888889999999986542 111110 011111122222221 1222222221111 11111
Q ss_pred ---------cCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEe--cCCCcEEEEEeCCCCEEE-EE------
Q 043707 234 ---------HYDAVSCLSLNAE-QGLLYSGSWDKTLKVWRISDCKCLESIN--AHDDAINSVVAGFDSLVF-TG------ 294 (347)
Q Consensus 234 ---------h~~~V~~l~~~~~-~~~l~s~s~dg~i~vwdl~~~~~~~~~~--~h~~~v~~i~~~~~~~l~-s~------ 294 (347)
+......|+++|+ +.++++...+++|++||..+++.+..+. .+...+..++++| ++++ +.
T Consensus 185 g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~ 263 (329)
T 3fvz_A 185 SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFG 263 (329)
T ss_dssp CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTT
T ss_pred CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEec
Confidence 1233789999998 6677777778999999999899988884 4566788999999 5332 22
Q ss_pred -eCCCcEEEEEcccCCccceeeehhhh---hccCCcEEEEEEccCCCEEEEecCCC
Q 043707 295 -SADGTVKVWRRELQGKGTKHFLAQVL---LKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 295 -~~dg~I~vwd~~~~~~~~~~~~~~~~---~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
..+..|++|+...+. .+..+ ..+...+..|+++|+|.++++...++
T Consensus 264 ~~~~~~v~~~~~~~g~------~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 264 DQEPVQGFVMNFSSGE------IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp CSCCCCEEEEETTTCC------EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred cCCCcEEEEEEcCCCe------EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 234589999987543 22222 35667799999999997777766554
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.37 E-value=1.4e-10 Score=100.62 Aligned_cols=182 Identities=11% Similarity=0.137 Sum_probs=124.8
Q ss_pred ccEEEEee--cCCEEEEecCCCcEEEEeCCCc-ceeee------cCCCCeeEEEEe-CCCCEEEEEeC-CCcEEEEecCC
Q 043707 124 GHIYSLAA--SGDLLYTGSDSKNIRVWKNLKE-FSGFK------SNSGLVKAIIIT-GDSNKIFTGHQ-DGKIRIWKVSR 192 (347)
Q Consensus 124 ~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~-~~~~~------~h~~~V~~l~~s-p~~~~l~s~~~-Dg~I~vwd~~~ 192 (347)
....++.. +++++++...++.|++||.... ...+. .+...+.++++. ++++.+++... ++.|++||. +
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~ 108 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-Y 108 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-T
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-C
Confidence 34555554 5778888888999999986533 22332 234578999995 66655555543 889999994 3
Q ss_pred CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Q 043707 193 KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLES 272 (347)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~ 272 (347)
++....... .+...+..++++++++++++...++.|.+||. +++.+..
T Consensus 109 g~~~~~~~~-------------------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 156 (286)
T 1q7f_A 109 GQFVRKFGA-------------------------------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHK 156 (286)
T ss_dssp SCEEEEECT-------------------------------TTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEE
T ss_pred CcEEEEecC-------------------------------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEE
Confidence 332111100 13456789999999998888778899999996 4666666
Q ss_pred Ee--cCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhh--ccCCcEEEEEEccCCCEEEEecCC
Q 043707 273 IN--AHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLL--KQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 273 ~~--~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~--~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
+. .+...+..|++++++ ++++...++.|++||... + ....+. ++...+..|+++++|+++++...+
T Consensus 157 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~-----~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 157 FGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG--Q-----YLRQIGGEGITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp EECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC--C-----EEEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred eCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC--C-----EEEEEccCCccCCCcEEEECCCCCEEEEeCCC
Confidence 64 344568999999998 455556789999999752 1 112222 233578999999999988887655
No 174
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.37 E-value=1.3e-10 Score=100.78 Aligned_cols=183 Identities=14% Similarity=0.226 Sum_probs=123.2
Q ss_pred ccEEEEee---cCCEEEEecC-CCcEEEEeCCCc-ceeee-cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCce
Q 043707 124 GHIYSLAA---SGDLLYTGSD-SKNIRVWKNLKE-FSGFK-SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSV 197 (347)
Q Consensus 124 ~~V~~l~~---~~~~l~tg~~-dg~I~vwd~~~~-~~~~~-~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~ 197 (347)
..+.++++ +++++++... ++.|++|+.... +..+. .+...+.++++.++++.+++...++.|++||.... ...
T Consensus 77 ~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~ 155 (286)
T 1q7f_A 77 LYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN-VLH 155 (286)
T ss_dssp SSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSC-EEE
T ss_pred cCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCC-EEE
Confidence 45666665 3445555533 789999994433 33332 23457899999999988888788899999996432 111
Q ss_pred eeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecC-
Q 043707 198 HKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAH- 276 (347)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h- 276 (347)
.... ..+...+..|+++++++++++...++.|++||. +++.+..+..+
T Consensus 156 ~~~~------------------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g 204 (286)
T 1q7f_A 156 KFGC------------------------------SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEG 204 (286)
T ss_dssp EEEC------------------------------TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTT
T ss_pred EeCC------------------------------CCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCC
Confidence 1000 014456889999999988888778999999997 56667777543
Q ss_pred -CCcEEEEEeCCCC-EEEEEeCCC-cEEEEEcccCCccceeeehhhhhcc--CCcEEEEEEccCCCEEEEecCCC
Q 043707 277 -DDAINSVVAGFDS-LVFTGSADG-TVKVWRRELQGKGTKHFLAQVLLKQ--ENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 277 -~~~v~~i~~~~~~-~l~s~~~dg-~I~vwd~~~~~~~~~~~~~~~~~~h--~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
...+..|++++++ ++++...++ .|.+||.. ++ .+..+..+ ...+.+++++|+|+++++ +.|+
T Consensus 205 ~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~--g~-----~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~ 271 (286)
T 1q7f_A 205 ITNYPIGVGINSNGEILIADNHNNFNLTIFTQD--GQ-----LISALESKVKHAQCFDVALMDDGSVVLA-SKDY 271 (286)
T ss_dssp TSCSEEEEEECTTCCEEEEECSSSCEEEEECTT--SC-----EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTT
T ss_pred ccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC--CC-----EEEEEcccCCCCcceeEEECCCCcEEEE-CCCC
Confidence 3578899999998 555555565 99999964 22 12222222 235789999999987776 4454
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.26 E-value=4.6e-10 Score=99.92 Aligned_cols=201 Identities=11% Similarity=0.103 Sum_probs=121.8
Q ss_pred EEeecCCEEEEecCC---C--cEEEEeCCC-cceeeecCCCCeeEEEEeCCCCEEEEEeCC-------------------
Q 043707 128 SLAASGDLLYTGSDS---K--NIRVWKNLK-EFSGFKSNSGLVKAIIITGDSNKIFTGHQD------------------- 182 (347)
Q Consensus 128 ~l~~~~~~l~tg~~d---g--~I~vwd~~~-~~~~~~~h~~~V~~l~~sp~~~~l~s~~~D------------------- 182 (347)
+++++|++|+..+.+ + .|++|+... ....+..+.. +..++|+|+++.|+.++.+
T Consensus 65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g 143 (347)
T 2gop_A 65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDD 143 (347)
T ss_dssp EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---
T ss_pred EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecC
Confidence 455678888877643 3 377777543 2333333334 9999999999998888743
Q ss_pred --------CcEEEEecCCCCC-ceeee-----ecccccccceEEeccC--------CCeEEEEeecceeeeeecCCCeeE
Q 043707 183 --------GKIRIWKVSRKNP-SVHKR-----VGSLPTFKDYVKSSVN--------PKNYVEVRRNRNVLKIRHYDAVSC 240 (347)
Q Consensus 183 --------g~I~vwd~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~h~~~V~~ 240 (347)
..|.+||+.+++. ..... +...+.. -++..... ...++.+..........+ ..+..
T Consensus 144 ~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~ 221 (347)
T 2gop_A 144 LGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYA 221 (347)
T ss_dssp ------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEE
T ss_pred cccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceee
Confidence 5689999987754 21111 0111222 11112111 112222222222222233 34443
Q ss_pred EEEcCCCCEEEEEeCC--------CcEEEEeCCCCEEEEEEecCCCcEEE-EEeCCCCEEEEEeCCCcEEEEEcccCCcc
Q 043707 241 LSLNAEQGLLYSGSWD--------KTLKVWRISDCKCLESINAHDDAINS-VVAGFDSLVFTGSADGTVKVWRRELQGKG 311 (347)
Q Consensus 241 l~~~~~~~~l~s~s~d--------g~i~vwdl~~~~~~~~~~~h~~~v~~-i~~~~~~~l~s~~~dg~I~vwd~~~~~~~ 311 (347)
++|+|+.|+.++.+ ..|.+|| +++.......+...+.. +.|+ ++++++++.++.++|| +. .++
T Consensus 222 --~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~-~g~- 293 (347)
T 2gop_A 222 --VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IW-DGE- 293 (347)
T ss_dssp --EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EE-SSS-
T ss_pred --ECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-CcEEEEEecCCcEEEE-Ec-CCc-
Confidence 48999988877654 3688888 56554444556777886 8999 7888888999999999 87 332
Q ss_pred ceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 312 TKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 312 ~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
. ..+..+...|.+++|+| .++++++.++
T Consensus 294 ----~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~ 321 (347)
T 2gop_A 294 ----I-KPIAKGRHWIMGFDVDE--IVVYLKETAT 321 (347)
T ss_dssp ----E-EEEECSSSEEEEEEESS--SEEEEEECSS
T ss_pred ----e-EEEecCCCeEEeeeeeC--cEEEEEcCCC
Confidence 1 22334467899999999 6777776654
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.25 E-value=2.1e-10 Score=102.18 Aligned_cols=164 Identities=12% Similarity=0.092 Sum_probs=107.5
Q ss_pred cCCEEEEec---------CCCcEEEEeCCCc-ceeeecCCCCeeEEEEeCCCCEEEEEeCC---Cc--EEEEecCCCCCc
Q 043707 132 SGDLLYTGS---------DSKNIRVWKNLKE-FSGFKSNSGLVKAIIITGDSNKIFTGHQD---GK--IRIWKVSRKNPS 196 (347)
Q Consensus 132 ~~~~l~tg~---------~dg~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~~~~l~s~~~D---g~--I~vwd~~~~~~~ 196 (347)
+|+.++... .++.|++|+.... ...+ ..+..++|+|+|++|+.++.+ +. |.+||+.+++..
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~ 98 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK 98 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE
Confidence 777655431 2567899986533 2233 568899999999999888754 33 777777665321
Q ss_pred eeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC--------------------
Q 043707 197 VHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD-------------------- 256 (347)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d-------------------- 256 (347)
... .+.. +..++|+|+++.|+.++.+
T Consensus 99 ~l~---------------------------------~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 99 KIL---------------------------------EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp EEE---------------------------------EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC----
T ss_pred EEE---------------------------------cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 111 1223 8899999999988887632
Q ss_pred -------CcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCC-------cEEEEEcccCCccceeeehhhhhc
Q 043707 257 -------KTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADG-------TVKVWRRELQGKGTKHFLAQVLLK 322 (347)
Q Consensus 257 -------g~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg-------~I~vwd~~~~~~~~~~~~~~~~~~ 322 (347)
..|.+||+.+++.+..+.. . .+..+.|+|+++++++..++ ...||.+. .++ ...+..
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d-~~~------~~~l~~ 215 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE-DGK------EEKMFE 215 (347)
T ss_dssp -----CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE-TTE------EEEEEE
T ss_pred ccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeC-CCc------eEEecc
Confidence 5699999999887555554 3 78889999999555555442 45666655 332 112222
Q ss_pred cCCcEEEEEEccCCCEEEEecCC
Q 043707 323 QENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 323 h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
+ ..+..+ +|+|+.|+.++.+
T Consensus 216 ~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 216 K-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp E-ESEEEE--EECSSCEEEEECC
T ss_pred C-cceeeE--CCCCCEEEEEEcc
Confidence 3 445544 9999988877654
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.24 E-value=1.4e-09 Score=93.13 Aligned_cols=182 Identities=8% Similarity=0.031 Sum_probs=122.3
Q ss_pred EEEEe--ecCCEEEEecCCCcEEEEeCCCcc-eeee-cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeee
Q 043707 126 IYSLA--ASGDLLYTGSDSKNIRVWKNLKEF-SGFK-SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRV 201 (347)
Q Consensus 126 V~~l~--~~~~~l~tg~~dg~I~vwd~~~~~-~~~~-~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~ 201 (347)
+.++. .+++++++.. ++.|++||..... ..+. .....+.++++.++++.+++...++.|.+|+..+.......
T Consensus 69 p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-- 145 (270)
T 1rwi_B 69 PQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-- 145 (270)
T ss_dssp CCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC--
T ss_pred cceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec--
Confidence 33444 4567666655 8899999965432 2222 22257899999999987777777889999975443211100
Q ss_pred cccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEE
Q 043707 202 GSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAIN 281 (347)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~ 281 (347)
......+..++++++++++++...++.|.+||............+...+.
T Consensus 146 ------------------------------~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~ 195 (270)
T 1rwi_B 146 ------------------------------FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPW 195 (270)
T ss_dssp ------------------------------CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEE
T ss_pred ------------------------------cccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCce
Confidence 01234577899999998777777788999999887665443333446688
Q ss_pred EEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 282 SVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 282 ~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
.|++.+++ ++++...++.|.+|+...... ......+...+.+++++++|+++++...++
T Consensus 196 ~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~------~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHNTNQVVKLLAGSTTS------TVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp EEEECTTCCEEEEETTTSCEEEECTTCSCC------EECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred EEEECCCCCEEEEECCCCcEEEEcCCCCcc------eeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 99999998 444555688999999863221 111122335789999999999777776554
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.23 E-value=4.7e-10 Score=97.17 Aligned_cols=171 Identities=8% Similarity=-0.027 Sum_probs=121.6
Q ss_pred CCEEEEecCCCcEEEEeCC--CcceeeecCC-CCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccc
Q 043707 133 GDLLYTGSDSKNIRVWKNL--KEFSGFKSNS-GLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKD 209 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~-~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~ 209 (347)
+++|++++.++.|++||.. +.+..+..+. ..+.++++.|+|+.|+ +.++.|+.||. +++.......
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~-------- 73 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA-------- 73 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC--------
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC--------
Confidence 5689999999999999963 4455666555 4789999999999888 34778999998 5653322211
Q ss_pred eEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCEEEEEEec------CCCcEEE
Q 043707 210 YVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-DKTLKVWRISDCKCLESINA------HDDAINS 282 (347)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-dg~i~vwdl~~~~~~~~~~~------h~~~v~~ 282 (347)
.....+.++.+.++++++++.+. ++.+..+|. +++.+..+.. +......
T Consensus 74 -----------------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 74 -----------------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQ 129 (276)
T ss_dssp -----------------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSC
T ss_pred -----------------------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccC
Confidence 12245778899999999999887 778888885 7888777652 1123445
Q ss_pred EEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 283 VVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 283 i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
+...+++ ++++...++.|.+||.. ++. +..+... ..+.++.+.++++.|++++.++
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~~-G~~------~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~ 186 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAPN-GQL------LNSVKLS-GTPFSSAFLDNGDCLVACGDAH 186 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECTT-SCE------EEEEECS-SCCCEEEECTTSCEEEECBTTS
T ss_pred ceECCCCCEEEEecCCCEEEEECCC-CCE------EEEEECC-CCccceeEcCCCCEEEEeCCCC
Confidence 5677777 88888899999999987 432 2222222 3455677888898888876653
No 179
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.22 E-value=8.4e-11 Score=106.07 Aligned_cols=145 Identities=6% Similarity=0.030 Sum_probs=106.0
Q ss_pred CeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEE
Q 043707 163 LVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLS 242 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 242 (347)
.+..+++++...++++|+.+ .+++|++...+......... -.......+.. |+.|+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~----------------------~~~~~~~~lp~-V~~l~ 94 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTP----------------------LTFKWEKEIPD-VIFVC 94 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCC----------------------CCCSEEEECTT-EEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhcccccc----------------------ccceEEeeCCC-eeEEE
Confidence 68999999999999999988 56669876432100000000 00011223666 99999
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhc
Q 043707 243 LNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLK 322 (347)
Q Consensus 243 ~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~ 322 (347)
| ++.+|+++ .++.|++||+++......+..|...+.++.+.+.. ++++..||.|.+||+..... . .
T Consensus 95 f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~------~----~ 160 (388)
T 1xip_A 95 F--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKST------K----Q 160 (388)
T ss_dssp E--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCE------E----E
T ss_pred E--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcc------c----c
Confidence 9 88999999 78999999998877666777788889888876543 88899999999999974332 1 1
Q ss_pred cCCcEEEEEEccCCCEEEEecCCCC
Q 043707 323 QENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 323 h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+...|++++|+|+| ++.|..||+
T Consensus 161 ~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 161 LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp EEESEEEEEECSSE--EEEEETTSC
T ss_pred ccCCceEEEEcCCc--eEEEEcCCc
Confidence 44589999999999 677777774
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.22 E-value=2.1e-10 Score=101.64 Aligned_cols=168 Identities=8% Similarity=0.050 Sum_probs=113.3
Q ss_pred EEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEec
Q 043707 135 LLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSS 214 (347)
Q Consensus 135 ~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (347)
.++....++.++.| ..+....+..+...+.+++|+++++.++++..++.|.+||..+++......
T Consensus 19 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~-------------- 83 (333)
T 2dg1_A 19 SAVPIISESELQTI-TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV-------------- 83 (333)
T ss_dssp CSSCCCCGGGSCEE-ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE--------------
T ss_pred ceeEEeecccCccc-ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee--------------
Confidence 34444566777888 334455566677778999999999888888889999999998765221110
Q ss_pred cCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC----CcEEEEeCCCCEEEEEEe--cCCCcEEEEEeCCC
Q 043707 215 VNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD----KTLKVWRISDCKCLESIN--AHDDAINSVVAGFD 288 (347)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d----g~i~vwdl~~~~~~~~~~--~h~~~v~~i~~~~~ 288 (347)
.+...+.+++++++++++++...+ +.|.+||..+++....+. .+...+..+++.|+
T Consensus 84 ------------------~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 84 ------------------SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp ------------------CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred ------------------CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 145679999999999988877766 689999998776543332 24457899999999
Q ss_pred CEEEEEeCC-------CcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEe
Q 043707 289 SLVFTGSAD-------GTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCG 342 (347)
Q Consensus 289 ~~l~s~~~d-------g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sg 342 (347)
+.++.+... +.|..||..... ...+..+...+..++|+|+++.|+.+
T Consensus 146 g~l~v~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 146 GGFYFTDFRGYSTNPLGGVYYVSPDFRT-------VTPIIQNISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp SCEEEEECCCBTTBCCEEEEEECTTSCC-------EEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred CCEEEEeccccccCCCceEEEEeCCCCE-------EEEeecCCCcccceEECCCCCEEEEE
Confidence 854444432 445555543211 11112233457899999999866544
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.20 E-value=2.3e-09 Score=102.06 Aligned_cols=176 Identities=8% Similarity=0.059 Sum_probs=126.2
Q ss_pred EeecCCEEEEecCCCcEEEEeCCC--cceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecC--CCCCceeeeeccc
Q 043707 129 LAASGDLLYTGSDSKNIRVWKNLK--EFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVS--RKNPSVHKRVGSL 204 (347)
Q Consensus 129 l~~~~~~l~tg~~dg~I~vwd~~~--~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~--~~~~~~~~~~~~~ 204 (347)
.++.+.++++...++.|.++|..+ .+..+. ....+..+.|+|+++++++++.|+.|.+||+. +.+......
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~---- 237 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK---- 237 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE----
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe----
Confidence 334455778888899999999653 344444 33467799999999999999999999999996 443222111
Q ss_pred ccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEc----CCCCEEEEEeC-CCcEEEEeCCCCEEEEEEecC---
Q 043707 205 PTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLN----AEQGLLYSGSW-DKTLKVWRISDCKCLESINAH--- 276 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~----~~~~~l~s~s~-dg~i~vwdl~~~~~~~~~~~h--- 276 (347)
.......++|+ |+|++++++.. ++++.|+|..+.+.+..+...
T Consensus 238 -----------------------------~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~ 288 (567)
T 1qks_A 238 -----------------------------IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 288 (567)
T ss_dssp -----------------------------CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEEC
T ss_pred -----------------------------cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccc
Confidence 22345689999 69998888765 699999999999998887632
Q ss_pred --------CCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 277 --------DDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 277 --------~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
...+..+..++++ +++....+|.|.++|...... +............++.|+|++++++++.
T Consensus 289 ~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~-----~~v~~i~~~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 289 YDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN-----LKTTEISAERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp TTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE-----EEEEEEECCSSEEEEEECTTSCEEEEEE
T ss_pred cccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc-----ceeeeeeccccccCceECCCCCEEEEEe
Confidence 1257788888875 666777889999999864321 1111112234567899999999987765
No 182
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.19 E-value=2.6e-10 Score=103.08 Aligned_cols=154 Identities=10% Similarity=0.034 Sum_probs=108.0
Q ss_pred cceeeecCCCCeeE-----EEEeCCCCEEEEEeC-CCc--EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEe
Q 043707 153 EFSGFKSNSGLVKA-----IIITGDSNKIFTGHQ-DGK--IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVR 224 (347)
Q Consensus 153 ~~~~~~~h~~~V~~-----l~~sp~~~~l~s~~~-Dg~--I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (347)
....+..|...... .+|+|||++|+.++. +|. |.+||+.+++......
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~------------------------ 77 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE------------------------ 77 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC------------------------
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee------------------------
Confidence 34445555544544 789999999998887 674 7788887764221110
Q ss_pred ecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEE--eCCCC-EEEE--------
Q 043707 225 RNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVV--AGFDS-LVFT-------- 293 (347)
Q Consensus 225 ~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~--~~~~~-~l~s-------- 293 (347)
.+...+..+.|+|+++.|+.++.++.|++||+.+++....+..+...+.... +++++ +++.
T Consensus 78 --------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~ 149 (388)
T 3pe7_A 78 --------GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDW 149 (388)
T ss_dssp --------SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGC
T ss_pred --------CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccc
Confidence 2334444678999999999999999999999999988777776666554443 47887 4442
Q ss_pred --------------EeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEcc-CCCEEEEecCC
Q 043707 294 --------------GSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQ-ESAVVYCGSSD 345 (347)
Q Consensus 294 --------------~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p-~~~~l~sgs~D 345 (347)
...+..|.+||+..+. ...+..+...+..++|+| +|+.|+.++.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~ 209 (388)
T 3pe7_A 150 VPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-------STVILQENQWLGHPIYRPYDDSTVAFCHEG 209 (388)
T ss_dssp CCCCSHHHHHHHGGGCCCEEEEEEETTTCC-------EEEEEEESSCEEEEEEETTEEEEEEEEECS
T ss_pred ccccccchhhhhhccCCcceEEEEECCCCc-------eEEeecCCccccccEECCCCCCEEEEEEec
Confidence 2245789999987543 223335566789999999 99988876653
No 183
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.19 E-value=1.8e-08 Score=87.99 Aligned_cols=204 Identities=10% Similarity=0.092 Sum_probs=122.7
Q ss_pred CCEEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeeccccccc--ce
Q 043707 133 GDLLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFK--DY 210 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~--~~ 210 (347)
+.++++...++.|+.||..............+.+++++++++++++ . ++.|.+||.++++.............. .-
T Consensus 25 ~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~d 102 (297)
T 3g4e_A 25 NSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFND 102 (297)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCC
Confidence 4577777788999999966443233334578999999999985544 4 568999998876532221111000000 01
Q ss_pred EEeccCCCe--------------------EEEEeec-ceeeeeecCCCeeEEEEcCCCCEEEE-EeCCCcEEEEeC--CC
Q 043707 211 VKSSVNPKN--------------------YVEVRRN-RNVLKIRHYDAVSCLSLNAEQGLLYS-GSWDKTLKVWRI--SD 266 (347)
Q Consensus 211 ~~~~~~~~~--------------------~~~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~s-~s~dg~i~vwdl--~~ 266 (347)
+....++.. ++.+... .......+....+.++|+|+++.|+. .+.++.|.+||+ .+
T Consensus 103 i~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~ 182 (297)
T 3g4e_A 103 GKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQT 182 (297)
T ss_dssp EEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTT
T ss_pred EEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCC
Confidence 111112221 2222111 11112223344678999999986654 455789999987 45
Q ss_pred CEE-----EEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEc-cCCCEE
Q 043707 267 CKC-----LESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVN-QESAVV 339 (347)
Q Consensus 267 ~~~-----~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~-p~~~~l 339 (347)
++. +..+..+......+++.++| +.++...++.|.+||..++. +...+..+...+++++|. |+++.|
T Consensus 183 G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~------~~~~i~~p~~~~t~~~f~g~d~~~L 256 (297)
T 3g4e_A 183 GQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK------RLQTVKLPVDKTTSCCFGGKNYSEM 256 (297)
T ss_dssp CCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC------EEEEEECSSSBEEEEEEESGGGCEE
T ss_pred CcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce------EEEEEECCCCCceEEEEeCCCCCEE
Confidence 542 22333344567889999988 44455567889999986443 344444555689999998 888776
Q ss_pred EEecC
Q 043707 340 YCGSS 344 (347)
Q Consensus 340 ~sgs~ 344 (347)
+.++.
T Consensus 257 ~vt~~ 261 (297)
T 3g4e_A 257 YVTCA 261 (297)
T ss_dssp EEEEB
T ss_pred EEEcC
Confidence 65543
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.17 E-value=1.6e-08 Score=96.30 Aligned_cols=227 Identities=13% Similarity=0.129 Sum_probs=136.2
Q ss_pred eeEeeeeccc-cEEEEeecCCEEEEecCCCcEEEEeCC--C--cceeeecCCCCeeEEEEe----CCCCEEEEEeC-CCc
Q 043707 115 LIGSIVRKEG-HIYSLAASGDLLYTGSDSKNIRVWKNL--K--EFSGFKSNSGLVKAIIIT----GDSNKIFTGHQ-DGK 184 (347)
Q Consensus 115 ~i~~l~~h~~-~V~~l~~~~~~l~tg~~dg~I~vwd~~--~--~~~~~~~h~~~V~~l~~s----p~~~~l~s~~~-Dg~ 184 (347)
++.++..... +...++++|+++++++.|+.|.+||.. + ....+.. ......++|+ |+|++++++.. ++.
T Consensus 189 v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~ 267 (567)
T 1qks_A 189 IKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQ 267 (567)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTE
T ss_pred EEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCe
Confidence 4444443222 334556789999999999999999974 2 2333333 2346789999 69998887764 589
Q ss_pred EEEEecCCCCCceeeeeccc----------ccccceEEeccCCCeEEEEeeccee-------------eeeecCCCeeEE
Q 043707 185 IRIWKVSRKNPSVHKRVGSL----------PTFKDYVKSSVNPKNYVEVRRNRNV-------------LKIRHYDAVSCL 241 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~h~~~V~~l 241 (347)
|.|+|..+.+......+... +....++.+......++.......+ ..+........+
T Consensus 268 v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~ 347 (567)
T 1qks_A 268 YVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDG 347 (567)
T ss_dssp EEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEE
T ss_pred EEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCc
Confidence 99999888765544333221 0111122222112222222211111 122334456788
Q ss_pred EEcCCCCEEEEEe-CCCcEEEEeCCCCEEEEEEec-----CCCcEEEEEeCCCC--EEEEEe-CCCcEEEEEcccCCcc-
Q 043707 242 SLNAEQGLLYSGS-WDKTLKVWRISDCKCLESINA-----HDDAINSVVAGFDS--LVFTGS-ADGTVKVWRRELQGKG- 311 (347)
Q Consensus 242 ~~~~~~~~l~s~s-~dg~i~vwdl~~~~~~~~~~~-----h~~~v~~i~~~~~~--~l~s~~-~dg~I~vwd~~~~~~~- 311 (347)
.|+|++++++++. .++.|.++|+.+++.+..+.. |.+.-.. .++|++ .++++. .++.|.++|....+..
T Consensus 348 ~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~ 426 (567)
T 1qks_A 348 GLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDPEGHPD 426 (567)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred eECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcccee-eECCCCCcEEEeCCCCCCeEEEecCCCCCCcc
Confidence 9999999887776 478999999999998877764 3221112 257774 444443 5689999999753221
Q ss_pred ceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 312 TKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 312 ~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
.....++.+......-..|+.+|++++|.+..
T Consensus 427 ~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 427 NAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp TBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred ccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 11223344443333334577899999888754
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.17 E-value=3.9e-10 Score=102.04 Aligned_cols=205 Identities=9% Similarity=-0.026 Sum_probs=117.6
Q ss_pred EeecCCEEEEecC---CCcEEEEeCCCc-ceeeecCCCC-eeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecc
Q 043707 129 LAASGDLLYTGSD---SKNIRVWKNLKE-FSGFKSNSGL-VKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGS 203 (347)
Q Consensus 129 l~~~~~~l~tg~~---dg~I~vwd~~~~-~~~~~~h~~~-V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~ 203 (347)
++++|++|+.... +..|++||.... ...+..+... ...+.|+|+|++|+.++.++.|++||+.+++.........
T Consensus 43 ~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~ 122 (396)
T 3c5m_A 43 FTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDE 122 (396)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCT
T ss_pred CCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEeccc
Confidence 4456666555433 246788885432 2333333333 3347899999999999999999999998876432222111
Q ss_pred --cccccceEE-------------------------ec---cCCCeEEEE---eecceeeeeecCCCeeEEEEcC-CCCE
Q 043707 204 --LPTFKDYVK-------------------------SS---VNPKNYVEV---RRNRNVLKIRHYDAVSCLSLNA-EQGL 249 (347)
Q Consensus 204 --~~~~~~~~~-------------------------~~---~~~~~~~~~---~~~~~~~~~~h~~~V~~l~~~~-~~~~ 249 (347)
.+....++. .. ......+.+ ..........+...+..+.|+| ++..
T Consensus 123 ~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~ 202 (396)
T 3c5m_A 123 EWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDST 202 (396)
T ss_dssp TEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEE
T ss_pred ccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCE
Confidence 011000000 00 011112222 2223333445677889999999 7876
Q ss_pred EEEEeCC------CcEEEEeCCCCEEEEEEecC--CCcEEEEEeCCCC-EEEEEeCC-----CcEEEEEcccCCccceee
Q 043707 250 LYSGSWD------KTLKVWRISDCKCLESINAH--DDAINSVVAGFDS-LVFTGSAD-----GTVKVWRRELQGKGTKHF 315 (347)
Q Consensus 250 l~s~s~d------g~i~vwdl~~~~~~~~~~~h--~~~v~~i~~~~~~-~l~s~~~d-----g~I~vwd~~~~~~~~~~~ 315 (347)
|+..+.+ ..|.+||+..++. ..+..+ ...+..+.|+|++ .|+.++.+ +.|++||+..+.. .
T Consensus 203 l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~----~ 277 (396)
T 3c5m_A 203 VGFCHEGPHDLVDARMWLVNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN----E 277 (396)
T ss_dssp EEEEECSCSSSCSCCCEEEETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE----E
T ss_pred EEEEecCCCCCCCceEEEEECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe----E
Confidence 7666543 4688999876543 333323 2357889999998 45554433 4499999875432 1
Q ss_pred ehhhhhccCCcEEEEEEcc-CCCEEEEec
Q 043707 316 LAQVLLKQENAITALAVNQ-ESAVVYCGS 343 (347)
Q Consensus 316 ~~~~~~~h~~~V~~l~~~p-~~~~l~sgs 343 (347)
.+..+. ... +.|+| +|++|+.++
T Consensus 278 ~l~~~~----~~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 278 EVMVMP----PCS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp EEEECC----SEE-EEEECSSSSEEEEEE
T ss_pred EeeeCC----CCC-CCccCCCCceEEEec
Confidence 111111 123 89999 999888754
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.17 E-value=2.5e-09 Score=91.62 Aligned_cols=180 Identities=8% Similarity=0.040 Sum_probs=116.9
Q ss_pred EEeecCCEEE-EecCCCcEEEEeCCCcceee--ecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeeccc
Q 043707 128 SLAASGDLLY-TGSDSKNIRVWKNLKEFSGF--KSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSL 204 (347)
Q Consensus 128 ~l~~~~~~l~-tg~~dg~I~vwd~~~~~~~~--~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~ 204 (347)
++..++++++ +...++.|.+|+........ ..+...+.++++.++++.+++.. ++.|.+||......... ..
T Consensus 30 ~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~-~~--- 104 (270)
T 1rwi_B 30 AVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVL-PF--- 104 (270)
T ss_dssp EECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEEC-CC---
T ss_pred EECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeee-ec---
Confidence 3445677666 54778899999865432222 12335688999999988666655 88999999876532110 00
Q ss_pred ccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEE
Q 043707 205 PTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVV 284 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~ 284 (347)
.....+..+++++++.++++...++.|.+|+..+.............+..|+
T Consensus 105 ----------------------------~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~ 156 (270)
T 1rwi_B 105 ----------------------------DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVA 156 (270)
T ss_dssp ----------------------------CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEE
T ss_pred ----------------------------CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEE
Confidence 1235678999999998877777788999998765543322223334578899
Q ss_pred eCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 285 AGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 285 ~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
+.+++ ++++...++.|.+||...... ......+...+..|+++++|.++++...++
T Consensus 157 ~~~~g~l~v~~~~~~~i~~~~~~~~~~------~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~ 213 (270)
T 1rwi_B 157 VDNSGNVYVTDTDNNRVVKLEAESNNQ------VVLPFTDITAPWGIAVDEAGTVYVTEHNTN 213 (270)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTTTCCE------EECCCSSCCSEEEEEECTTCCEEEEETTTS
T ss_pred EeCCCCEEEEECCCCEEEEEecCCCce------EeecccCCCCceEEEECCCCCEEEEECCCC
Confidence 99988 555555678999999864321 111122335789999999997777665443
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.14 E-value=1.8e-09 Score=105.95 Aligned_cols=186 Identities=8% Similarity=-0.020 Sum_probs=119.8
Q ss_pred EEeecCCEEEEecCCC-----cEEEEeCCCcc-eeeecCCCCeeEEEEeCCCCEEEEEeCCCc----------------E
Q 043707 128 SLAASGDLLYTGSDSK-----NIRVWKNLKEF-SGFKSNSGLVKAIIITGDSNKIFTGHQDGK----------------I 185 (347)
Q Consensus 128 ~l~~~~~~l~tg~~dg-----~I~vwd~~~~~-~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~----------------I 185 (347)
+++++|++|+.+..++ .|++||..... .........+..++|+|||+.|+.++.++. |
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v 210 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKL 210 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEE
Confidence 4446788887665433 89999965432 211111223678999999999999988766 9
Q ss_pred EEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-----CCcEE
Q 043707 186 RIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-----DKTLK 260 (347)
Q Consensus 186 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-----dg~i~ 260 (347)
++|++.+++........ . ..|...+..+.|+|++++|+..+. +..|+
T Consensus 211 ~~~~l~t~~~~~~~v~~-~---------------------------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~ 262 (710)
T 2xdw_A 211 YYHVLGTDQSEDILCAE-F---------------------------PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLW 262 (710)
T ss_dssp EEEETTSCGGGCEEEEC-C---------------------------TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEE
T ss_pred EEEECCCCcccceEEec-c---------------------------CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEE
Confidence 99999776421111000 0 014455778999999999888765 56899
Q ss_pred EEeCCC------CE-EEEEEecCCCcEEEEEeCCCC-EEEEEeC----CCcEEEEEcccCCccceeeehhhhhccCC--c
Q 043707 261 VWRISD------CK-CLESINAHDDAINSVVAGFDS-LVFTGSA----DGTVKVWRRELQGKGTKHFLAQVLLKQEN--A 326 (347)
Q Consensus 261 vwdl~~------~~-~~~~~~~h~~~v~~i~~~~~~-~l~s~~~----dg~I~vwd~~~~~~~~~~~~~~~~~~h~~--~ 326 (347)
+||+.+ ++ ....+..+...+... |++++ .|+..+. .+.|.+||+...... ....+..|.. .
T Consensus 263 ~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~----~~~~l~~~~~~~~ 337 (710)
T 2xdw_A 263 YCDLQQESNGITGILKWVKLIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEES----KWKVLVPEHEKDV 337 (710)
T ss_dssp EEEGGGSSSSSCSSCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG----GCEEEECCCSSCE
T ss_pred EEECcccccccCCccceEEeeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc----cceeccCCCCCCe
Confidence 999976 43 456666676666553 66665 4444333 336999998744210 1223334433 6
Q ss_pred EEEEEEccCCCEEEEecCCC
Q 043707 327 ITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 327 V~~l~~~p~~~~l~sgs~DG 346 (347)
+..++|++++.++++...||
T Consensus 338 ~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 338 LEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp EEEEEEETTTEEEEEEEETT
T ss_pred EEEEEEEcCCEEEEEEEECC
Confidence 88899998778888887776
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.14 E-value=1.6e-09 Score=106.18 Aligned_cols=191 Identities=9% Similarity=-0.064 Sum_probs=120.0
Q ss_pred ccccEEEEe--ecCCEEE-----EecCCCcEEEEeCCCcceeeecCCCCe--eEEEEeCCCCEEEEEeCCCc--------
Q 043707 122 KEGHIYSLA--ASGDLLY-----TGSDSKNIRVWKNLKEFSGFKSNSGLV--KAIIITGDSNKIFTGHQDGK-------- 184 (347)
Q Consensus 122 h~~~V~~l~--~~~~~l~-----tg~~dg~I~vwd~~~~~~~~~~h~~~V--~~l~~sp~~~~l~s~~~Dg~-------- 184 (347)
|+..+.++. ++|++|+ .|+.+..|++||+.........+...+ ..++|+|||+.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccC
Confidence 333455444 5788888 555667899999654322101122222 68999999999999998876
Q ss_pred -----EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCC--
Q 043707 185 -----IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDK-- 257 (347)
Q Consensus 185 -----I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg-- 257 (347)
|++|++.++......... . ..+...+..+.|+|+|++|+..+.++
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~-~---------------------------~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHE-R---------------------------TGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEEC-C---------------------------CCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred CCCCEEEEEECCCCchhceEEEe-c---------------------------CCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 999999876521111000 0 02446788999999999888877666
Q ss_pred --cEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEe---CCCcEEEEEcccCCccceeeehhhhhcc--CCcEEEE
Q 043707 258 --TLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGS---ADGTVKVWRRELQGKGTKHFLAQVLLKQ--ENAITAL 330 (347)
Q Consensus 258 --~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~---~dg~I~vwd~~~~~~~~~~~~~~~~~~h--~~~V~~l 330 (347)
.|.+||..+++ ...+..+...+....++++++++.+. .++.|.+||+...... ....+..+ ...|..+
T Consensus 251 ~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~----~~~~l~~~~~~~~l~~~ 325 (695)
T 2bkl_A 251 ENDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARA----SWKEIVPEDSSASLLSV 325 (695)
T ss_dssp EEEEEEECTTCSS-CEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGG----GCEEEECCCSSCEEEEE
T ss_pred ceEEEEEcCCCCc-eEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCcc----CCeEEecCCCCCeEEEE
Confidence 67777765554 34455555566666664444333333 2588999998654310 01222222 4468889
Q ss_pred EEccCCCEEEEecCCC
Q 043707 331 AVNQESAVVYCGSSDG 346 (347)
Q Consensus 331 ~~~p~~~~l~sgs~DG 346 (347)
+|+ ++.++++...||
T Consensus 326 ~~~-~~~lv~~~~~dg 340 (695)
T 2bkl_A 326 SIV-GGHLSLEYLKDA 340 (695)
T ss_dssp EEE-TTEEEEEEEETT
T ss_pred EEE-CCEEEEEEEECC
Confidence 998 667788877766
No 189
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.13 E-value=1.2e-08 Score=89.32 Aligned_cols=206 Identities=8% Similarity=0.017 Sum_probs=119.5
Q ss_pred ecCCEEEE-------ecCCCcEEEEeCC-Ccceeeec-----CCCCeeEEEEeCC-CCEEEEEeCCCcEEEEecCCCCCc
Q 043707 131 ASGDLLYT-------GSDSKNIRVWKNL-KEFSGFKS-----NSGLVKAIIITGD-SNKIFTGHQDGKIRIWKVSRKNPS 196 (347)
Q Consensus 131 ~~~~~l~t-------g~~dg~I~vwd~~-~~~~~~~~-----h~~~V~~l~~sp~-~~~l~s~~~Dg~I~vwd~~~~~~~ 196 (347)
.++.++++ +..++.|.+|+.. .....+.. +...+.+++++++ ++.++ +...+.|.+||.. ++..
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFE 104 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEE
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEE
Confidence 45667777 5778899999843 33333332 4467899999998 65444 4444578899987 5432
Q ss_pred ee-eeec-ccc-ccc---------ceEEeccCC---------------CeEEEEeecc-eeeeeecCCCeeEEEEc----
Q 043707 197 VH-KRVG-SLP-TFK---------DYVKSSVNP---------------KNYVEVRRNR-NVLKIRHYDAVSCLSLN---- 244 (347)
Q Consensus 197 ~~-~~~~-~~~-~~~---------~~~~~~~~~---------------~~~~~~~~~~-~~~~~~h~~~V~~l~~~---- 244 (347)
.. .... ..+ ... .++...... ..++.+.... ......+......++|+
T Consensus 105 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d 184 (314)
T 1pjx_A 105 EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMND 184 (314)
T ss_dssp ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTT
T ss_pred EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCcceEEEecccC
Confidence 11 1000 000 000 111111111 1122221111 11122233456788999
Q ss_pred CCCCEEEEE-eCCCcEEEEeCC-CCE-----EEEEEecCC-CcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceee
Q 043707 245 AEQGLLYSG-SWDKTLKVWRIS-DCK-----CLESINAHD-DAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHF 315 (347)
Q Consensus 245 ~~~~~l~s~-s~dg~i~vwdl~-~~~-----~~~~~~~h~-~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~ 315 (347)
++++.|+.+ ..++.|.+||+. +++ ....+..+. ..+..+++.+++ ++++...++.|.+||.+++.
T Consensus 185 ~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~------ 258 (314)
T 1pjx_A 185 GRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ------ 258 (314)
T ss_dssp SCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS------
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc------
Confidence 998766555 567899999986 454 223333343 567889999988 44455578899999986332
Q ss_pred ehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 316 LAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 316 ~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
....+..+...+.+++|+++++.|+.++.
T Consensus 259 ~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 259 PKMRIRCPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp CSEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EeEEEeCCCCCceeEEECCCCCEEEEEeC
Confidence 22223344568999999999996665543
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.13 E-value=1.6e-08 Score=89.69 Aligned_cols=210 Identities=11% Similarity=-0.032 Sum_probs=129.0
Q ss_pred EEEEeecCC-EEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec
Q 043707 126 IYSLAASGD-LLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG 202 (347)
Q Consensus 126 V~~l~~~~~-~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~ 202 (347)
...+.++++ ++++...++.|.+||.. +.+..+. .......++++++++.+++...++.|.+||..+++......+.
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g 124 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECP 124 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECT
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcC
Confidence 345555555 55555667899999965 3344453 3467889999998844444448999999999887654443333
Q ss_pred c------cccc-----cceEEeccC-CCeEEEEe--ecceeeeeecCCCeeEEEEcCCCCEEEEEeCC----------Cc
Q 043707 203 S------LPTF-----KDYVKSSVN-PKNYVEVR--RNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD----------KT 258 (347)
Q Consensus 203 ~------~~~~-----~~~~~~~~~-~~~~~~~~--~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d----------g~ 258 (347)
. .|.. ..++..... ...+..+. .......+........+.+++++++++++..+ +.
T Consensus 125 ~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 125 DMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp TCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred CccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCce
Confidence 3 2221 112222221 22222221 12222223334456788999999877776554 78
Q ss_pred EEEEeCCCCEEEEEEecC-CCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCC
Q 043707 259 LKVWRISDCKCLESINAH-DDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQES 336 (347)
Q Consensus 259 i~vwdl~~~~~~~~~~~h-~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~ 336 (347)
|.++|..+++.+..+... ......++++|++ .|+++.. .|.+||..+.... ....+.........++++|++
T Consensus 205 v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~----~~~~~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 205 LYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP----VRPFLEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp EEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC----SSCSBCCCSSCEEEEEECTTT
T ss_pred EEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee----eeeeecCCCCceEEEEEcCCC
Confidence 999999999988777643 2367899999976 6666544 8999998754320 011111124578999999954
Q ss_pred -CEEEEe
Q 043707 337 -AVVYCG 342 (347)
Q Consensus 337 -~~l~sg 342 (347)
.+.++.
T Consensus 279 g~lyva~ 285 (328)
T 3dsm_A 279 GEVYVAD 285 (328)
T ss_dssp CCEEEEE
T ss_pred CeEEEEc
Confidence 555544
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.13 E-value=1e-08 Score=100.62 Aligned_cols=177 Identities=7% Similarity=0.030 Sum_probs=115.1
Q ss_pred EEeecCCEEEEecCCCc----------------EEEEeCCCcc----eeeec--CCCCeeEEEEeCCCCEEEEEeC----
Q 043707 128 SLAASGDLLYTGSDSKN----------------IRVWKNLKEF----SGFKS--NSGLVKAIIITGDSNKIFTGHQ---- 181 (347)
Q Consensus 128 ~l~~~~~~l~tg~~dg~----------------I~vwd~~~~~----~~~~~--h~~~V~~l~~sp~~~~l~s~~~---- 181 (347)
++.++|+.|+.+..++. |++|+..... ..+.. |...+..+.|+|+|++|+.++.
T Consensus 177 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 177 AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 34456888888877765 9999976432 22222 4556889999999999888765
Q ss_pred -CCcEEEEecCC------CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe
Q 043707 182 -DGKIRIWKVSR------KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS 254 (347)
Q Consensus 182 -Dg~I~vwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s 254 (347)
+..|++||+.+ +....... ..+...+.. .|++++..|+..+
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l-------------------------------~~~~~~~~~-~~s~dg~~l~~~s 304 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKL-------------------------------IDNFEGEYD-YVTNEGTVFTFKT 304 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEE-------------------------------ECSSSSCEE-EEEEETTEEEEEE
T ss_pred CccEEEEEECcccccccCCccceEEe-------------------------------eCCCCcEEE-EEeccCCEEEEEE
Confidence 56899999976 32111111 123444443 4788888777666
Q ss_pred CC----CcEEEEeCCCCE--EEEEEecCCC--cEEEEEeCCCC-EEEEEeCCCcEEE--EEcccCCccceeeehhhhhcc
Q 043707 255 WD----KTLKVWRISDCK--CLESINAHDD--AINSVVAGFDS-LVFTGSADGTVKV--WRRELQGKGTKHFLAQVLLKQ 323 (347)
Q Consensus 255 ~d----g~i~vwdl~~~~--~~~~~~~h~~--~v~~i~~~~~~-~l~s~~~dg~I~v--wd~~~~~~~~~~~~~~~~~~h 323 (347)
.+ +.|.+||+.+++ ....+..|.. .+..+.|.+++ ++++...|+..+| |++..++ ....+..+
T Consensus 305 ~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~------~~~~l~~~ 378 (710)
T 2xdw_A 305 NRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA------LLKIFPLE 378 (710)
T ss_dssp CTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC------EEEEECCC
T ss_pred CCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC------EEEecCCC
Confidence 53 359999998764 2344545544 68888888666 7777888885555 5553222 22334455
Q ss_pred CCcEEEEEEccCCCEEEEe
Q 043707 324 ENAITALAVNQESAVVYCG 342 (347)
Q Consensus 324 ~~~V~~l~~~p~~~~l~sg 342 (347)
...|..++++|++..|+..
T Consensus 379 ~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 379 VGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp SSEEEEEECCTTCSEEEEE
T ss_pred CceEEEEecCCCCCEEEEE
Confidence 7788999999998766543
No 192
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.13 E-value=1.7e-09 Score=95.93 Aligned_cols=153 Identities=12% Similarity=0.119 Sum_probs=108.0
Q ss_pred cEEEEee---cCCEEEEec-CCCcEEEEeCCCc-ceeeec----------CCCCeeEEEEeCC-CCEEEEEeCCCcEEEE
Q 043707 125 HIYSLAA---SGDLLYTGS-DSKNIRVWKNLKE-FSGFKS----------NSGLVKAIIITGD-SNKIFTGHQDGKIRIW 188 (347)
Q Consensus 125 ~V~~l~~---~~~~l~tg~-~dg~I~vwd~~~~-~~~~~~----------h~~~V~~l~~sp~-~~~l~s~~~Dg~I~vw 188 (347)
....+++ ++.++++.+ .++.|++|+.... +..+.. +-.....|+++|+ +..+++...++.|++|
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~ 223 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCF 223 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEE
Confidence 4555554 456777775 6899999995433 333321 2234889999998 7777777788999999
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC------CCCEEEEEeCCCcEEEE
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA------EQGLLYSGSWDKTLKVW 262 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~------~~~~l~s~s~dg~i~vw 262 (347)
|..+++........ .+...+..++++| ++..+++...+.+|++|
T Consensus 224 ~~~~G~~~~~~~~~------------------------------~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~ 273 (329)
T 3fvz_A 224 KTDTKEFVREIKHA------------------------------SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVM 273 (329)
T ss_dssp ETTTCCEEEEECCT------------------------------TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEE
T ss_pred ECCCCcEEEEEecc------------------------------ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEE
Confidence 99866533222111 2456677888888 33333333345589999
Q ss_pred eCCCCEEEEEEe---cCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEccc
Q 043707 263 RISDCKCLESIN---AHDDAINSVVAGFDS-LVFTGSADGTVKVWRREL 307 (347)
Q Consensus 263 dl~~~~~~~~~~---~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~ 307 (347)
|+.+++.+..+. .+...+..|++++++ ++++...++.|++|++..
T Consensus 274 ~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 274 NFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 999999998883 667779999999998 666777899999999863
No 193
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.13 E-value=2.8e-08 Score=86.08 Aligned_cols=182 Identities=10% Similarity=0.074 Sum_probs=124.2
Q ss_pred ccEEEEee--cCCEEEEecCCCcEEEEeCCCcceeee--cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee
Q 043707 124 GHIYSLAA--SGDLLYTGSDSKNIRVWKNLKEFSGFK--SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 124 ~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~~~~~~--~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~ 199 (347)
..+.++.. ++.++++...++.|..|+.......+. .....+.++++.++++.+++...++.|.+||. +++....
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~- 134 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY- 134 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe-
Confidence 45666665 567777777788999998664444333 23457899999999988887777889999998 4432111
Q ss_pred eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEE-EecCCC
Q 043707 200 RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLES-INAHDD 278 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~-~~~h~~ 278 (347)
.. ......+..+++.+++.++++...++.|.+||. +++.... +..+..
T Consensus 135 ~~------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 183 (299)
T 2z2n_A 135 EL------------------------------PNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPAS 183 (299)
T ss_dssp EC------------------------------SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred cC------------------------------CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCC
Confidence 00 013456789999999988877777789999998 6655432 333455
Q ss_pred cEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 279 AINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 279 ~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.+..+++.+++ ++++...++.|.+||. .+.. . ...+..+...+.+|+++++|++.++...
T Consensus 184 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--~---~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 184 GPVGITKGNDDALWFVEIIGNKIGRITT-SGEI--T---EFKIPTPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp CEEEEEECTTSSEEEEETTTTEEEEECT-TCCE--E---EEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred cceeEEECCCCCEEEEccCCceEEEECC-CCcE--E---EEECCCCCCCceeEEECCCCCEEEeccC
Confidence 68899999988 4444456789999998 3321 1 1112234567899999999987766533
No 194
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.12 E-value=3.4e-09 Score=95.80 Aligned_cols=163 Identities=10% Similarity=0.007 Sum_probs=104.5
Q ss_pred CCCcEEEEeCCC-cceeeecCCCCeeEEEEeC-CCCEEEEEeCC------CcEEEEecCCCCCceeeeecccccccceEE
Q 043707 141 DSKNIRVWKNLK-EFSGFKSNSGLVKAIIITG-DSNKIFTGHQD------GKIRIWKVSRKNPSVHKRVGSLPTFKDYVK 212 (347)
Q Consensus 141 ~dg~I~vwd~~~-~~~~~~~h~~~V~~l~~sp-~~~~l~s~~~D------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~ 212 (347)
.+..|++||... ....+..+...+..+.|+| +++.|+.++.+ ..|.+||+..++......
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~------------ 233 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE------------ 233 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC------------
T ss_pred CcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec------------
Confidence 456788898653 2334445667899999999 78777776644 357788876543211100
Q ss_pred eccCCCeEEEEeecceeeeeec-CCCeeEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCEEEEEEecCCCcEEEEEeC
Q 043707 213 SSVNPKNYVEVRRNRNVLKIRH-YDAVSCLSLNAEQGLLYSGSWD-----KTLKVWRISDCKCLESINAHDDAINSVVAG 286 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~h-~~~V~~l~~~~~~~~l~s~s~d-----g~i~vwdl~~~~~~~~~~~h~~~v~~i~~~ 286 (347)
.. ...+..++|+|+++.|+..+.+ +.|++||+.+++...... ... .. +.|+
T Consensus 234 --------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s 290 (396)
T 3c5m_A 234 --------------------HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMS 290 (396)
T ss_dssp --------------------CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEE
T ss_pred --------------------cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCcc
Confidence 01 2247788999999977766543 449999998886543322 122 33 8899
Q ss_pred C-CC-EEEEEe----------------CCCcEEEEEcccCCccceeeehhhhhccCC-----------cEEEEEEccCCC
Q 043707 287 F-DS-LVFTGS----------------ADGTVKVWRRELQGKGTKHFLAQVLLKQEN-----------AITALAVNQESA 337 (347)
Q Consensus 287 ~-~~-~l~s~~----------------~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~-----------~V~~l~~~p~~~ 337 (347)
| ++ +++.++ .+..|++||+..+.. ..+..+.. .+..++|+|+|+
T Consensus 291 ~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 291 NFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-------QKLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp CSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-------CEEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred CCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-------EEccCCCCccccccccccCCCCCceEccCCC
Confidence 8 88 555543 347899999874321 22333332 256789999999
Q ss_pred EEEEecCC
Q 043707 338 VVYCGSSD 345 (347)
Q Consensus 338 ~l~sgs~D 345 (347)
.|+.++.+
T Consensus 364 ~l~~~s~~ 371 (396)
T 3c5m_A 364 GVLFTSDF 371 (396)
T ss_dssp EEEEEECT
T ss_pred eEEEEecC
Confidence 88877653
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.10 E-value=6.7e-08 Score=83.61 Aligned_cols=184 Identities=11% Similarity=0.110 Sum_probs=124.2
Q ss_pred ccccEEEEee--cCCEEEEecCCCcEEEEeCCCcceeee--cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCce
Q 043707 122 KEGHIYSLAA--SGDLLYTGSDSKNIRVWKNLKEFSGFK--SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSV 197 (347)
Q Consensus 122 h~~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~~~~~~--~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~ 197 (347)
+...+.++.. +|+++++...++.|.+||.......+. .+...+.++++.+++..+++...++.|..||.. ++. .
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~ 90 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-K 90 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-E
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-E
Confidence 3456777765 466777666678999999764444333 245679999999999888877778899999875 221 1
Q ss_pred eeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEE-EecC
Q 043707 198 HKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLES-INAH 276 (347)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~-~~~h 276 (347)
.... + .....+..+++.+++.++++...++.|.+||. +++.... +..+
T Consensus 91 ~~~~---~---------------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 91 EYTL---P---------------------------NPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp EEEC---S---------------------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred EEeC---C---------------------------CcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 1100 0 13456888999999988888777889999998 5544322 2334
Q ss_pred CCcEEEEEeCCCCEE-EEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 277 DDAINSVVAGFDSLV-FTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 277 ~~~v~~i~~~~~~~l-~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
...+..+++.+++.+ ++...++.|..||. .+.. . ...+..+...+..+++++++.+.++...
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~--~---~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI--T---EFKIPTPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE--E---EEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE--E---EeeCCCCCCcceeEEECCCCCEEEEccC
Confidence 566899999998844 44555789999998 3221 1 1112233456889999999987766543
No 196
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.09 E-value=1.1e-07 Score=84.28 Aligned_cols=206 Identities=8% Similarity=0.079 Sum_probs=121.0
Q ss_pred EEeec-CCEEEEecCCCcEEEEeCCCc-ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec---
Q 043707 128 SLAAS-GDLLYTGSDSKNIRVWKNLKE-FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG--- 202 (347)
Q Consensus 128 ~l~~~-~~~l~tg~~dg~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~--- 202 (347)
.+.++ +.+++++..++.|.+||.... ...+ .....+.+++|+++++++++. .+ .|.+||..+++........
T Consensus 55 ~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~ 131 (326)
T 2ghs_A 55 TFDPASGTAWWFNILERELHELHLASGRKTVH-ALPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDL 131 (326)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTTTEEEEE-ECSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTC
T ss_pred eEeCCCCEEEEEECCCCEEEEEECCCCcEEEE-ECCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCC
Confidence 34444 446777777889999996543 2323 235679999999999766654 44 4999998777532221110
Q ss_pred ---------ccccccceEEeccC------CCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEE-eCCCcEEEEeCC-
Q 043707 203 ---------SLPTFKDYVKSSVN------PKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSG-SWDKTLKVWRIS- 265 (347)
Q Consensus 203 ---------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~-s~dg~i~vwdl~- 265 (347)
..+... ++..... ...++.+..........+......++|+++++.|+.+ +.++.|.+||+.
T Consensus 132 ~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 132 PGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp TTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 011111 1111110 1122222211111122233456789999999876555 457899999986
Q ss_pred -CC-E-----EEEEEecCCCcEEEEEeCCCCEEE-EEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEc-cCC
Q 043707 266 -DC-K-----CLESINAHDDAINSVVAGFDSLVF-TGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVN-QES 336 (347)
Q Consensus 266 -~~-~-----~~~~~~~h~~~v~~i~~~~~~~l~-s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~-p~~ 336 (347)
++ + .+..+......+..+++.+++.|. +...++.|.+||.. ++ ....+..+...+++++|. +++
T Consensus 211 ~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~--g~-----~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 211 RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD--GN-----HIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT--CC-----EEEEEECSCSBEEEEEEESTTS
T ss_pred ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC--CC-----EEEEEECCCCCcEEEEEecCCC
Confidence 55 2 233333344567889999888444 44456889999874 22 223333455679999998 888
Q ss_pred CEEEEecC
Q 043707 337 AVVYCGSS 344 (347)
Q Consensus 337 ~~l~sgs~ 344 (347)
+.|+.++.
T Consensus 284 ~~L~vt~~ 291 (326)
T 2ghs_A 284 SRLLVTSA 291 (326)
T ss_dssp CEEEEEEB
T ss_pred CEEEEEec
Confidence 77755543
No 197
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.06 E-value=3.6e-08 Score=86.36 Aligned_cols=218 Identities=8% Similarity=0.092 Sum_probs=131.1
Q ss_pred eEeeeeccccEEEEe--ecCC-EEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCC
Q 043707 116 IGSIVRKEGHIYSLA--ASGD-LLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 116 i~~l~~h~~~V~~l~--~~~~-~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
+..+........... ++++ +++++..++.|..|+.......+..+...+..++++++|+++++...++.|.+|+.+
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 333433333344444 4666 778888889999999765566677777889999999999876666666889999976
Q ss_pred CCCceeee-ec-----------ccccccceEEe----cc-------------CCCeEEEEee--cceeeeeecCCCeeEE
Q 043707 193 KNPSVHKR-VG-----------SLPTFKDYVKS----SV-------------NPKNYVEVRR--NRNVLKIRHYDAVSCL 241 (347)
Q Consensus 193 ~~~~~~~~-~~-----------~~~~~~~~~~~----~~-------------~~~~~~~~~~--~~~~~~~~h~~~V~~l 241 (347)
++...... .. ..+.. .++.. .. ....++.+.. ....... .......+
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl 193 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGL 193 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcce
Confidence 43211110 00 00111 11111 00 0112222221 1111122 33456789
Q ss_pred EEcCCCCEEEEEeCC------CcEEEEeCCCCEEEE---EE-ecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCcc
Q 043707 242 SLNAEQGLLYSGSWD------KTLKVWRISDCKCLE---SI-NAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKG 311 (347)
Q Consensus 242 ~~~~~~~~l~s~s~d------g~i~vwdl~~~~~~~---~~-~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~ 311 (347)
+|+|+++.|+.+... +.|.+|++.... +. .+ .........+++.++|.|.++..+ .|.+|+.. ++
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~~~--g~- 268 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFDSD--GQ- 268 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEECTT--SC-
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEECCC--CC-
Confidence 999999988887665 689999987654 22 11 112334556888888877666655 48999874 22
Q ss_pred ceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 312 TKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 312 ~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
....+..+. .+..++|.++++.|+.++.++
T Consensus 269 ----~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 269 ----LLGHIPTPG-TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp ----EEEEEECSS-CCCEEEECTTSCEEEEEETTE
T ss_pred ----EEEEEECCC-ceeEEEEeCCCCEEEEEcCCe
Confidence 222222233 588999999998888877665
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.04 E-value=6.3e-09 Score=101.86 Aligned_cols=175 Identities=13% Similarity=0.004 Sum_probs=112.9
Q ss_pred EEeecCCEEEEecCCCc-------------EEEEeCCCcc----ee--eecCCCCeeEEEEeCCCCEEEEEeCCC----c
Q 043707 128 SLAASGDLLYTGSDSKN-------------IRVWKNLKEF----SG--FKSNSGLVKAIIITGDSNKIFTGHQDG----K 184 (347)
Q Consensus 128 ~l~~~~~~l~tg~~dg~-------------I~vwd~~~~~----~~--~~~h~~~V~~l~~sp~~~~l~s~~~Dg----~ 184 (347)
++.++|+.|+.++.|.. |++|+..... .. ...|...+..+.|+|+|++|+.++.++ .
T Consensus 174 ~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 174 KWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEND 253 (695)
T ss_dssp EECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEE
T ss_pred EEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceE
Confidence 44557888888888766 9999976432 22 223556789999999999998887766 5
Q ss_pred EEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC---CCcEEE
Q 043707 185 IRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW---DKTLKV 261 (347)
Q Consensus 185 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~---dg~i~v 261 (347)
|++|+..+++.... ..+...+....+ +++.+++.... ++.|.+
T Consensus 254 l~~~~~~~~~~~~l---------------------------------~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~ 299 (695)
T 2bkl_A 254 VYWKRPGEKDFRLL---------------------------------VKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFE 299 (695)
T ss_dssp EEEECTTCSSCEEE---------------------------------EECSSCCEEEEE-ETTEEEEEECTTCTTCEEEE
T ss_pred EEEEcCCCCceEEe---------------------------------ecCCCceEEEEe-cCCcEEEEECCCCCCCEEEE
Confidence 66665543321111 124444555556 45555444442 578999
Q ss_pred EeCCCCEE--EEEEecC--CCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhcc-CCcEEEEEEccCC
Q 043707 262 WRISDCKC--LESINAH--DDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQ-ENAITALAVNQES 336 (347)
Q Consensus 262 wdl~~~~~--~~~~~~h--~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h-~~~V~~l~~~p~~ 336 (347)
||+.+++. ...+..+ ...+..+.+..+.++++...|+..+||.+...+. ....+..+ ...|..++++|++
T Consensus 300 ~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~-----~~~~l~~~~~~~v~~~~~s~d~ 374 (695)
T 2bkl_A 300 VDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGK-----PVRTVQLPGVGAASNLMGLEDL 374 (695)
T ss_dssp EBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCC-----EEEECCCSSSSEECCCBSCTTC
T ss_pred EeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC-----eeEEecCCCCeEEEEeecCCCC
Confidence 99987653 2333333 4567888888444888888999999997764332 22223333 5678888999988
Q ss_pred CEEEE
Q 043707 337 AVVYC 341 (347)
Q Consensus 337 ~~l~s 341 (347)
+.|+.
T Consensus 375 ~~l~~ 379 (695)
T 2bkl_A 375 DDAYY 379 (695)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 76663
No 199
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.03 E-value=6.5e-09 Score=93.54 Aligned_cols=137 Identities=10% Similarity=0.137 Sum_probs=97.3
Q ss_pred CCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEe----------CCCcEEEEecCCCCCceeeeeccccccc
Q 043707 141 DSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGH----------QDGKIRIWKVSRKNPSVHKRVGSLPTFK 208 (347)
Q Consensus 141 ~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~----------~Dg~I~vwd~~~~~~~~~~~~~~~~~~~ 208 (347)
.|+.|++||.. +....+..+..+ .++|+|++++++++. .++.|.+||..+.+......+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~---- 102 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPK---- 102 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTT----
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcc----
Confidence 47799999954 334455555444 899999999999986 367899999987654333222100
Q ss_pred ceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCEEEEE-EecCCCcEEEEEe
Q 043707 209 DYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW--DKTLKVWRISDCKCLES-INAHDDAINSVVA 285 (347)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~--dg~i~vwdl~~~~~~~~-~~~h~~~v~~i~~ 285 (347)
...+......++++|++++|+++.. +++|.+||+.+++.+.. +... . ...+.+
T Consensus 103 ----------------------~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~-~~~v~~ 158 (361)
T 2oiz_A 103 ----------------------RVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-G-CWSVIP 158 (361)
T ss_dssp ----------------------BCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-T-EEEEEE
T ss_pred ----------------------ccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-C-cceeEE
Confidence 0012345677999999999999874 68999999999998887 5532 2 223456
Q ss_pred CCCC--EEEEEeCCCcEEEEEccc
Q 043707 286 GFDS--LVFTGSADGTVKVWRREL 307 (347)
Q Consensus 286 ~~~~--~l~s~~~dg~I~vwd~~~ 307 (347)
.|++ .+++.+.||.+.+|+...
T Consensus 159 ~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 159 QPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CTTSSSEEEEEETTSSEEEEEECT
T ss_pred cCCCCeeEEEECCCCcEEEEEECC
Confidence 6765 778888999999999864
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.03 E-value=5e-08 Score=84.32 Aligned_cols=195 Identities=10% Similarity=0.013 Sum_probs=127.5
Q ss_pred eeEeeeecc-ccEE--EEeecCCEEEEecCCCcEEEEeC-CCcceeeecC-CCCeeEEEEeCCCCEEEEEeC-CCcEEEE
Q 043707 115 LIGSIVRKE-GHIY--SLAASGDLLYTGSDSKNIRVWKN-LKEFSGFKSN-SGLVKAIIITGDSNKIFTGHQ-DGKIRIW 188 (347)
Q Consensus 115 ~i~~l~~h~-~~V~--~l~~~~~~l~tg~~dg~I~vwd~-~~~~~~~~~h-~~~V~~l~~sp~~~~l~s~~~-Dg~I~vw 188 (347)
.+..+..+. ..+. .+.++|++|++ .++.|+.||. .+.+..+..+ ...+.++.+.++|+.+++.+. ++.|..+
T Consensus 27 ~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~v 104 (276)
T 3no2_A 27 IVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEV 104 (276)
T ss_dssp EEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEE
T ss_pred EEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEE
Confidence 344454443 2333 44567888883 4678999996 3445555554 347889999999999999887 7777777
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK 268 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~ 268 (347)
|. +++.......... . ..+......+++.+++++|++...++.|.+||.. ++
T Consensus 105 d~-~Gk~l~~~~~~~~-------------------------~-~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 105 NM-KGEVLSKTEFETG-------------------------I-ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp CT-TSCEEEEEEECCS-------------------------C-SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred eC-CCCEEEEEeccCC-------------------------C-CcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 75 3432222211100 0 0122234456788999999999999999999987 99
Q ss_pred EEEEEecCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehh-hhhc-cCCcEEEEEEccCCCEEEEe
Q 043707 269 CLESINAHDDAINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQ-VLLK-QENAITALAVNQESAVVYCG 342 (347)
Q Consensus 269 ~~~~~~~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~-~~~~-h~~~V~~l~~~p~~~~l~sg 342 (347)
.+.++.... .+..+...+++ +++++..++.|..+|..+++. ...... .+.+ ....+..++..++|..+++.
T Consensus 157 ~~w~~~~~~-~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 157 LLNSVKLSG-TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI--VRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEEECSS-CCCEEEECTTSCEEEECBTTSEEEEECTTTCCE--EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEEEEECCC-CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE--EEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 999887653 45566677776 777777788999999875543 111111 1111 22357889999999888876
No 201
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.00 E-value=1.5e-08 Score=88.23 Aligned_cols=150 Identities=13% Similarity=0.102 Sum_probs=103.1
Q ss_pred ceeeecCCCCeeEEEEeCCCC-EEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeee
Q 043707 154 FSGFKSNSGLVKAIIITGDSN-KIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKI 232 (347)
Q Consensus 154 ~~~~~~h~~~V~~l~~sp~~~-~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (347)
+..+..+.....+++|+|+++ .++++..++.|..||..++ . ....
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~-~~~~-------------------------------- 65 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L-SPEM-------------------------------- 65 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E-EEEE--------------------------------
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e-EEEE--------------------------------
Confidence 445555667789999999998 7888888999999998865 1 1111
Q ss_pred ecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecC----CCcEEEEEeCCCC-EEEE----Ee--------
Q 043707 233 RHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAH----DDAINSVVAGFDS-LVFT----GS-------- 295 (347)
Q Consensus 233 ~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h----~~~v~~i~~~~~~-~l~s----~~-------- 295 (347)
.+...+.++++++++.++++...++.|.+||..+++........ ...+..+++.|+| ++++ |.
T Consensus 66 ~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 66 HPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp SSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSC
T ss_pred CCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccc
Confidence 24567889999999998877777789999999888754433221 2345679999998 4444 32
Q ss_pred -----CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 296 -----ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 296 -----~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
..+.|..++.. +. ...+..+...+..++|+|+++.|++.+.+
T Consensus 146 ~~~~~~~~~l~~~~~~--g~------~~~~~~~~~~~~gi~~s~dg~~lv~~~~~ 192 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPD--GT------LSAPIRDRVKPNGLAFLPSGNLLVSDTGD 192 (296)
T ss_dssp CCCCSSSCEEEEECTT--SC------EEEEECCCSSEEEEEECTTSCEEEEETTT
T ss_pred ccccCCCcEEEEECCC--CC------EEEeecCCCCCccEEECCCCCEEEEeCCC
Confidence 12345555443 22 12223455677899999999988666544
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.93 E-value=5.9e-07 Score=77.60 Aligned_cols=182 Identities=10% Similarity=0.089 Sum_probs=120.7
Q ss_pred ccEEEEee--cCCEEEEecCCCcEEEEeCCCcceeeec--CCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee
Q 043707 124 GHIYSLAA--SGDLLYTGSDSKNIRVWKNLKEFSGFKS--NSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 124 ~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~~~~~~~--h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~ 199 (347)
..+.++.. +++++++...++.|..||.......+.. ....+.++++.++++.+++...++.|..||.. ++... .
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~ 139 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-Y 139 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-E
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-c
Confidence 44566665 4667777666788999986644443332 34678999999999888777778899999876 43211 1
Q ss_pred eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEE-EecCCC
Q 043707 200 RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLES-INAHDD 278 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~-~~~h~~ 278 (347)
... .....+..+++.++++++++...++.|.+||. +++.... +..+..
T Consensus 140 ~~~------------------------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 188 (300)
T 2qc5_A 140 DLP------------------------------NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAA 188 (300)
T ss_dssp ECS------------------------------STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTC
T ss_pred cCC------------------------------CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCC
Confidence 000 13356788999999997776666788999998 5554432 223445
Q ss_pred cEEEEEeCCCCEEEEE-eCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 279 AINSVVAGFDSLVFTG-SADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 279 ~v~~i~~~~~~~l~s~-~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.+..+++.+++.|..+ ...+.|.+||.. +.. ....+..+...+.+|+++++|++.++...
T Consensus 189 ~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~-----~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 189 APVGITSGNDGALWFVEIMGNKIGRITTT-GEI-----SEYDIPTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp CEEEEEECTTSSEEEEETTTTEEEEECTT-CCE-----EEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred CcceEEECCCCCEEEEccCCCEEEEEcCC-CcE-----EEEECCCCCCCceEEEECCCCCEEEeccC
Confidence 6889999988844444 456789999883 221 11112234557899999999987666543
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.90 E-value=8.6e-07 Score=76.56 Aligned_cols=182 Identities=11% Similarity=0.125 Sum_probs=122.1
Q ss_pred ccEEEEee--cCCEEEEecCCCcEEEEeCCCcceeee--cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee
Q 043707 124 GHIYSLAA--SGDLLYTGSDSKNIRVWKNLKEFSGFK--SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 124 ~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~~~~~~~--~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~ 199 (347)
..+.++.. +|+++++...++.|.+|+....+..+. .....+.++++.++++.+++...++.|.+||.. ++.. ..
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~ 97 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EY 97 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EE
T ss_pred CCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-Ee
Confidence 35556654 577777777789999998664433322 233678999999999877777778889999987 4321 11
Q ss_pred eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEE-EEecCCC
Q 043707 200 RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLE-SINAHDD 278 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~-~~~~h~~ 278 (347)
... .....+..+++.+++.++++...++.|..||.. ++... .+.....
T Consensus 98 ~~~------------------------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~ 146 (300)
T 2qc5_A 98 PLP------------------------------QPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGS 146 (300)
T ss_dssp ECS------------------------------STTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTC
T ss_pred cCC------------------------------CCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCC
Confidence 100 123567889999999888877778899999987 55442 2333456
Q ss_pred cEEEEEeCCCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 279 AINSVVAGFDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 279 ~v~~i~~~~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.+..+++.+++ ++++...++.|..||.. +.. .......+...+..+++.+++.+.++...
T Consensus 147 ~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~-----~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQNNSIGRITNT-GKL-----EEYPLPTNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp CEEEEEECTTSSEEEEETTTTEEEEECTT-CCE-----EEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred CceeEEECCCCCEEEEecCCCeEEEECCC-CcE-----EEeeCCCCCCCcceEEECCCCCEEEEccC
Confidence 78899999988 44444557889999873 221 11112233457899999999887766543
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.90 E-value=4.1e-08 Score=96.85 Aligned_cols=184 Identities=8% Similarity=0.015 Sum_probs=111.9
Q ss_pred EEeecCCEEEEecCC-----CcEEEEeCCCcc-eeeecCCCCeeEEEEeCCCCEEEEEeCCCc--------------EEE
Q 043707 128 SLAASGDLLYTGSDS-----KNIRVWKNLKEF-SGFKSNSGLVKAIIITGDSNKIFTGHQDGK--------------IRI 187 (347)
Q Consensus 128 ~l~~~~~~l~tg~~d-----g~I~vwd~~~~~-~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~--------------I~v 187 (347)
+++++|++|+.+..+ ..|++||..... .....+...+..++|+|| +.|+.+..|+. |++
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~ 247 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWL 247 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEE
Confidence 344568888776543 369999965432 111112222367899999 89888887654 788
Q ss_pred EecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCC-----cEEEE
Q 043707 188 WKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDK-----TLKVW 262 (347)
Q Consensus 188 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg-----~i~vw 262 (347)
|++.++......... . ..+...+..+.|+|||++|+..+.++ .|++|
T Consensus 248 ~~lgt~~~~~~lv~~-~---------------------------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~ 299 (741)
T 1yr2_A 248 HRLGTPQSADQPVFA-T---------------------------PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVA 299 (741)
T ss_dssp EETTSCGGGCEEEEC-C---------------------------TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEE
T ss_pred EECCCCchhCEEEec-c---------------------------CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEE
Confidence 887655321111000 0 01333578899999999888877544 79999
Q ss_pred eCCCCE-E-EEEEecCCCcEEEEEeCCCC-EEEEEeC----CCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccC
Q 043707 263 RISDCK-C-LESINAHDDAINSVVAGFDS-LVFTGSA----DGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQE 335 (347)
Q Consensus 263 dl~~~~-~-~~~~~~h~~~v~~i~~~~~~-~l~s~~~----dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~ 335 (347)
|+.++. . ...+..+...+....+ |++ .|+..+. ++.|.+||+..... .....+..+...+..++|. +
T Consensus 300 d~~~~~~~~~~~l~~~~~~~~~~~~-~dg~~l~~~s~~~~~~~~l~~~d~~~~~~----~~~~l~~~~~~~l~~~~~~-~ 373 (741)
T 1yr2_A 300 RVTNGKIGPVTALIPDLKAQWDFVD-GVGDQLWFVSGDGAPLKKIVRVDLSGSTP----RFDTVVPESKDNLESVGIA-G 373 (741)
T ss_dssp EEETTEECCCEEEECSSSSCEEEEE-EETTEEEEEECTTCTTCEEEEEECSSSSC----EEEEEECCCSSEEEEEEEE-B
T ss_pred ECCCCCCcccEEecCCCCceEEEEe-ccCCEEEEEECCCCCCCEEEEEeCCCCcc----ccEEEecCCCCeEEEEEEE-C
Confidence 998773 2 5566656555555544 555 5555544 45699999864310 1122223445567788887 5
Q ss_pred CCEEEEecCCC
Q 043707 336 SAVVYCGSSDG 346 (347)
Q Consensus 336 ~~~l~sgs~DG 346 (347)
+.++++...||
T Consensus 374 ~~lv~~~~~dg 384 (741)
T 1yr2_A 374 NRLFASYIHDA 384 (741)
T ss_dssp TEEEEEEEETT
T ss_pred CEEEEEEEECC
Confidence 56777777665
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.85 E-value=1.4e-06 Score=79.53 Aligned_cols=208 Identities=10% Similarity=0.009 Sum_probs=119.9
Q ss_pred EEEEee--cCCEEEEecCCCcEEEEeCCC-cceeeecCCCCeeEEEEeCCCCEEEEEeCCC--cEEEEecCCCCCceee-
Q 043707 126 IYSLAA--SGDLLYTGSDSKNIRVWKNLK-EFSGFKSNSGLVKAIIITGDSNKIFTGHQDG--KIRIWKVSRKNPSVHK- 199 (347)
Q Consensus 126 V~~l~~--~~~~l~tg~~dg~I~vwd~~~-~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg--~I~vwd~~~~~~~~~~- 199 (347)
...+++ +++++++...++.|++||... .+..+........ ++|+++++.|+.+..++ .|.+|+...+......
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g 211 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIG 211 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEE
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEee
Confidence 445554 566777777789999999763 3433333333344 99999999999988866 7888887765431111
Q ss_pred ee-c---c-------cccccceEEeccCCCeEEEEeec-ceeeee------ecCCCe--eEEEEcCC-CCEEEEEeCCCc
Q 043707 200 RV-G---S-------LPTFKDYVKSSVNPKNYVEVRRN-RNVLKI------RHYDAV--SCLSLNAE-QGLLYSGSWDKT 258 (347)
Q Consensus 200 ~~-~---~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~h~~~V--~~l~~~~~-~~~l~s~s~dg~ 258 (347)
.. . . .+....++.... ...+..+... ...... ++...- ..++|+|+ +.++++-...+.
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~ 290 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS 290 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE
T ss_pred eccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE
Confidence 00 0 0 111112222211 2222222211 111111 111112 28999995 555555566889
Q ss_pred EEEEeCCCCEEEEEEecCC---------------CcEEEEEeCCCC-EEEEEe-CCCcEEEEEcccCCccceeeehhhhh
Q 043707 259 LKVWRISDCKCLESINAHD---------------DAINSVVAGFDS-LVFTGS-ADGTVKVWRRELQGKGTKHFLAQVLL 321 (347)
Q Consensus 259 i~vwdl~~~~~~~~~~~h~---------------~~v~~i~~~~~~-~l~s~~-~dg~I~vwd~~~~~~~~~~~~~~~~~ 321 (347)
|+.|+.... +..+.++. .....|++.+++ ++++-. .++.|+.|++..+.. ..+.
T Consensus 291 I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-------~~~~ 361 (409)
T 3hrp_A 291 VYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-------STVA 361 (409)
T ss_dssp EEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-------EEEE
T ss_pred EEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-------EEEe
Confidence 999997643 33333332 347899999998 555556 789999999653321 1111
Q ss_pred c---------------cCCcEEEEEEccCCCEEEEecC
Q 043707 322 K---------------QENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 322 ~---------------h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
+ .-.....|++++++.++++-..
T Consensus 362 g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 362 GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC
Confidence 1 1246899999999776666543
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.83 E-value=1.9e-07 Score=81.58 Aligned_cols=157 Identities=11% Similarity=0.129 Sum_probs=105.8
Q ss_pred EEEEee--cCCEEEEecCC---------------CcEEEEeCCCcceeeecCCCCeeEEEEe----CCCCEEEEE-eCCC
Q 043707 126 IYSLAA--SGDLLYTGSDS---------------KNIRVWKNLKEFSGFKSNSGLVKAIIIT----GDSNKIFTG-HQDG 183 (347)
Q Consensus 126 V~~l~~--~~~~l~tg~~d---------------g~I~vwd~~~~~~~~~~h~~~V~~l~~s----p~~~~l~s~-~~Dg 183 (347)
+.++.+ +|+++++...+ +.|..|+.......+..+......++|+ |+++.|+.+ ..++
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~ 198 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTK 198 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTT
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCC
Confidence 445554 56677666544 5677777554444443444567899999 998665554 5678
Q ss_pred cEEEEecC-CCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecC-CCeeEEEEcCCCCEEEEEeCCCcEEE
Q 043707 184 KIRIWKVS-RKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHY-DAVSCLSLNAEQGLLYSGSWDKTLKV 261 (347)
Q Consensus 184 ~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~~~~~~~l~s~s~dg~i~v 261 (347)
.|.+||++ .++......... ...+. ..+..++++++++++++...++.|.+
T Consensus 199 ~i~~~~~~~~g~~~~~~~~~~---------------------------~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 199 KLWSYDIKGPAKIENKKVWGH---------------------------IPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp EEEEEEEEETTEEEEEEEEEE---------------------------CCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred eEEEEECCCCCccccceEEEE---------------------------CCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 99999986 222110000000 00122 45678999999998888878899999
Q ss_pred EeCCCCEEEEEEecCCCcEEEEEeCCCC-EEE-EEeCCCcEEEEEcccCC
Q 043707 262 WRISDCKCLESINAHDDAINSVVAGFDS-LVF-TGSADGTVKVWRRELQG 309 (347)
Q Consensus 262 wdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~-s~~~dg~I~vwd~~~~~ 309 (347)
||.++++.+..+..+...+.++++++++ .|+ +...++.|..|++...+
T Consensus 252 ~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 252 FGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp ECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred EcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 9998777777777777789999999987 355 44567899999987543
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.82 E-value=3.3e-06 Score=76.16 Aligned_cols=221 Identities=10% Similarity=-0.013 Sum_probs=120.8
Q ss_pred eeEeeeeccccEEEEeecCCEEEEec----------CCCcEEEEeCCCc--ceeeecC-------CCCeeEEEEeCCCCE
Q 043707 115 LIGSIVRKEGHIYSLAASGDLLYTGS----------DSKNIRVWKNLKE--FSGFKSN-------SGLVKAIIITGDSNK 175 (347)
Q Consensus 115 ~i~~l~~h~~~V~~l~~~~~~l~tg~----------~dg~I~vwd~~~~--~~~~~~h-------~~~V~~l~~sp~~~~ 175 (347)
++..+..-..+-..++++|++|+.+. .++.|.+||.... ...+..- ......++|+|+|++
T Consensus 59 ~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~ 138 (373)
T 2mad_H 59 ILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD 138 (373)
T ss_pred EEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE
Confidence 45555544444556778899888875 3678999996432 2222211 123458999999999
Q ss_pred EEEEeC--CCcEEEEecCCCCCcee-eeecc----ccccc-ceEEeccCCCeEEEEeecceeeee------ecCCC-eeE
Q 043707 176 IFTGHQ--DGKIRIWKVSRKNPSVH-KRVGS----LPTFK-DYVKSSVNPKNYVEVRRNRNVLKI------RHYDA-VSC 240 (347)
Q Consensus 176 l~s~~~--Dg~I~vwd~~~~~~~~~-~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~-V~~ 240 (347)
|+.+.. ++.|.++| .+++.... ..+.. .+... .++..+.++...+........... ....+ ...
T Consensus 139 l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~ 217 (373)
T 2mad_H 139 LLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQ 217 (373)
T ss_pred EEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeec
Confidence 998874 57899999 88765433 22211 11111 112222222211111111111000 01111 122
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCC--EEEEEEecC----------CCcEEEEEeCCCC-EEEEEeC----------C
Q 043707 241 LSLNAEQGLLYSGSWDKTLKVWRISDC--KCLESINAH----------DDAINSVVAGFDS-LVFTGSA----------D 297 (347)
Q Consensus 241 l~~~~~~~~l~s~s~dg~i~vwdl~~~--~~~~~~~~h----------~~~v~~i~~~~~~-~l~s~~~----------d 297 (347)
..+.+++..++..+.++.+.+.|+... +.+..+... ......+.+++++ .++++.. +
T Consensus 218 ~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~ 297 (373)
T 2mad_H 218 PAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA 297 (373)
T ss_pred ceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCC
Confidence 345555554444446889999999654 233333211 1223447788886 4444432 3
Q ss_pred CcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCC-EEEEec
Q 043707 298 GTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESA-VVYCGS 343 (347)
Q Consensus 298 g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~-~l~sgs 343 (347)
+.|.++|+.+.+ ....+. -......++|+|||+ +++++.
T Consensus 298 ~~V~VID~~t~~------vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 298 KEVTSVTGLVGQ------TSSQIS-LGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred CeEEEEECCCCE------EEEEEE-CCCCcCeEEECCCCCeEEEEEc
Confidence 579999997543 223332 123578999999999 787776
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.76 E-value=5.9e-07 Score=88.55 Aligned_cols=172 Identities=15% Similarity=0.109 Sum_probs=109.9
Q ss_pred ecCCEEEEecCCCc--------------EEEEeCCCcc----eeeec--CCCCeeEEEEeCCCCEEEEEeCCC-----cE
Q 043707 131 ASGDLLYTGSDSKN--------------IRVWKNLKEF----SGFKS--NSGLVKAIIITGDSNKIFTGHQDG-----KI 185 (347)
Q Consensus 131 ~~~~~l~tg~~dg~--------------I~vwd~~~~~----~~~~~--h~~~V~~l~~sp~~~~l~s~~~Dg-----~I 185 (347)
++ +.|+.+..++. |++|+..... ..+.. +...+..+.|+|+|++|+..+.++ .|
T Consensus 218 pD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l 296 (741)
T 1yr2_A 218 GN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTV 296 (741)
T ss_dssp TT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEE
T ss_pred CC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceE
Confidence 45 67777666543 8899865332 22222 333588999999999988887654 79
Q ss_pred EEEecCCCCCc-eeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC----CcEE
Q 043707 186 RIWKVSRKNPS-VHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD----KTLK 260 (347)
Q Consensus 186 ~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d----g~i~ 260 (347)
++||+.++... .... ..+...+.... .+++..|+..+.+ +.|.
T Consensus 297 ~~~d~~~~~~~~~~~l-------------------------------~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 297 HVARVTNGKIGPVTAL-------------------------------IPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp EEEEEETTEECCCEEE-------------------------------ECSSSSCEEEE-EEETTEEEEEECTTCTTCEEE
T ss_pred EEEECCCCCCcccEEe-------------------------------cCCCCceEEEE-eccCCEEEEEECCCCCCCEEE
Confidence 99998765211 1111 01333333333 4788888877753 4599
Q ss_pred EEeCCCC--EEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhc-cCCcEEEEEEccCCC
Q 043707 261 VWRISDC--KCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLK-QENAITALAVNQESA 337 (347)
Q Consensus 261 vwdl~~~--~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~p~~~ 337 (347)
+||+.++ +....+..+...+..+.+..+.++++...|+..+||.+...+. ....+.. ....|..++++|+++
T Consensus 345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~-----~~~~l~~~~~~~v~~~~~s~d~~ 419 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGK-----PAGAVSLPGIGSASGLSGRPGDR 419 (741)
T ss_dssp EEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSC-----EEEECBCSSSCEEEEEECCBTCS
T ss_pred EEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCC-----ceeeccCCCCeEEEEeecCCCCC
Confidence 9999874 3444445555567777887444788888999988887763332 2222332 356789999999987
Q ss_pred EEE
Q 043707 338 VVY 340 (347)
Q Consensus 338 ~l~ 340 (347)
.|+
T Consensus 420 ~l~ 422 (741)
T 1yr2_A 420 HAY 422 (741)
T ss_dssp CEE
T ss_pred EEE
Confidence 555
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.72 E-value=1.1e-06 Score=76.49 Aligned_cols=119 Identities=10% Similarity=0.029 Sum_probs=81.0
Q ss_pred cEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEE-EEeCCCcEEEEecC--CCCCceeeeecccccccceEEeccCCCeE
Q 043707 144 NIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIF-TGHQDGKIRIWKVS--RKNPSVHKRVGSLPTFKDYVKSSVNPKNY 220 (347)
Q Consensus 144 ~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~-s~~~Dg~I~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
.|+.++.......+..+......++|+|+++.|+ +...++.|.+||++ ++...........
T Consensus 131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~---------------- 194 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL---------------- 194 (297)
T ss_dssp EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC----------------
T ss_pred EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC----------------
Confidence 4555554433333334445678999999998665 45567899999984 3331111100000
Q ss_pred EEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeC-CCC
Q 043707 221 VEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAG-FDS 289 (347)
Q Consensus 221 ~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~-~~~ 289 (347)
..+......+++.++|++.++...++.|.+||..+++.+..+..+...+++++|. |++
T Consensus 195 -----------~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 195 -----------EKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp -----------CGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred -----------CCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 0123456789999999888877778889999999899999998887789999997 664
No 210
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.69 E-value=1.3e-06 Score=77.28 Aligned_cols=192 Identities=6% Similarity=-0.034 Sum_probs=111.9
Q ss_pred CCCcEEEEeCCCcc--eee-e-----cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeeccc-------c
Q 043707 141 DSKNIRVWKNLKEF--SGF-K-----SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSL-------P 205 (347)
Q Consensus 141 ~dg~I~vwd~~~~~--~~~-~-----~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~-------~ 205 (347)
.++.|.+||..... ..+ . ........+.+.. ++.+++...++.|.+||..+++.......... +
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC
Confidence 47899999965321 111 0 1223467788754 44555566689999999998875443321111 1
Q ss_pred cccceEEeccCCCeEEEEee--cceeeeeecCC------CeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCEEEEEEec
Q 043707 206 TFKDYVKSSVNPKNYVEVRR--NRNVLKIRHYD------AVSCLSLNAEQGLLYSGS--WDKTLKVWRISDCKCLESINA 275 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~h~~------~V~~l~~~~~~~~l~s~s--~dg~i~vwdl~~~~~~~~~~~ 275 (347)
.. .++........+..+.. ......+.-.. ....|++ ++..|+++. .+++|.++|+.+++.+..+..
T Consensus 94 ~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 94 DE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp TT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 11 12222211222222211 11111222222 4566777 455566665 488999999999998888875
Q ss_pred CCCcEEEEEeCCCCEEEEEeC-C----------CcEEEEEcccCCccceeeehhhhhcc-CCcEEEEEEccCCCEEEEec
Q 043707 276 HDDAINSVVAGFDSLVFTGSA-D----------GTVKVWRRELQGKGTKHFLAQVLLKQ-ENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 276 h~~~v~~i~~~~~~~l~s~~~-d----------g~I~vwd~~~~~~~~~~~~~~~~~~h-~~~V~~l~~~p~~~~l~sgs 343 (347)
.. ....+++++++.++.++. + +.|.+||..+.. ....+... ......|+|+|+++.|+++.
T Consensus 171 g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~------v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 171 GI-QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT------VEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp SS-CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE------EEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred CC-CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe------EEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 43 356788999985554443 3 789999987443 22222211 23689999999999888764
No 211
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.66 E-value=6.6e-08 Score=87.19 Aligned_cols=173 Identities=12% Similarity=0.076 Sum_probs=87.7
Q ss_pred ecCCEEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec------
Q 043707 131 ASGDLLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG------ 202 (347)
Q Consensus 131 ~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~------ 202 (347)
.+++++++++.||.|+.||.. +....+.. +.+.+..+..++..+++++.||.|+.||..+++........
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 367889999999999999954 44444444 55655556667778888889999999999887654322111
Q ss_pred ccccc--cceEEeccCCCeEEEEee-cceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCc
Q 043707 203 SLPTF--KDYVKSSVNPKNYVEVRR-NRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDA 279 (347)
Q Consensus 203 ~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~ 279 (347)
..|.. ...+........++.+.. .....+...... ...++|++..+++++.|+.|+.||.++++.+-.+..+.
T Consensus 85 ~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-- 160 (369)
T 2hz6_A 85 ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-- 160 (369)
T ss_dssp TCSCC-----CCCCEEEEEEEEECCC------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--
T ss_pred cCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--
Confidence 11111 111111111111111111 111111111111 23456678899999999999999999998765554221
Q ss_pred EEEEEeCCC----CEEEEEeCCCcEEEEEcccCC
Q 043707 280 INSVVAGFD----SLVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 280 v~~i~~~~~----~~l~s~~~dg~I~vwd~~~~~ 309 (347)
.....+..+ +.+++++.||.|+.||.+++.
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 122233332 577888999999999998654
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.64 E-value=5.7e-07 Score=87.97 Aligned_cols=182 Identities=15% Similarity=0.131 Sum_probs=108.1
Q ss_pred EEeecCCEEEE-----ecCCCcEEEEeCCCcce-eeecCCCCeeEEEEeCCCCEEEEEeCCCc-------------EEEE
Q 043707 128 SLAASGDLLYT-----GSDSKNIRVWKNLKEFS-GFKSNSGLVKAIIITGDSNKIFTGHQDGK-------------IRIW 188 (347)
Q Consensus 128 ~l~~~~~~l~t-----g~~dg~I~vwd~~~~~~-~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~-------------I~vw 188 (347)
+++++|++||- |++...|++||+..... ....+......++|+ |++.|+.+..+.. |++|
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~ 213 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFH 213 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEE
Confidence 45567887773 34446799999764321 111111113578899 9999999887743 8888
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeee-cCCCeeEEEEcCCCCEEEEEeC----CCcEEEEe
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIR-HYDAVSCLSLNAEQGLLYSGSW----DKTLKVWR 263 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~~~~~~l~s~s~----dg~i~vwd 263 (347)
++.+.......... . .. |...+..+.|+||+++|+.... +..|+++|
T Consensus 214 ~lgt~~~~~~~v~~-~---------------------------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 214 RLGTAQEDDRLVFG-A---------------------------IPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp ETTSCGGGCEEEES-C---------------------------SGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEE
T ss_pred ECCCCcccceEEEe-c---------------------------CCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEE
Confidence 88765421111100 0 01 2344678899999998765432 35899999
Q ss_pred CCCCE-EEEEEecCCCcEEEEEeCCCC-EEEEEeCC---CcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCE
Q 043707 264 ISDCK-CLESINAHDDAINSVVAGFDS-LVFTGSAD---GTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAV 338 (347)
Q Consensus 264 l~~~~-~~~~~~~h~~~v~~i~~~~~~-~l~s~~~d---g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~ 338 (347)
+.+++ ....+..+.........++++ +++....+ +.|.++|+...... ..+.+..|...+. .|+++++.
T Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~----~~~~l~~~~~~~~--~~s~~g~~ 339 (693)
T 3iuj_A 266 LSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA----HWRDLIPERQQVL--TVHSGSGY 339 (693)
T ss_dssp TTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG----GCEEEECCCSSCE--EEEEETTE
T ss_pred CCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc----ccEEEecCCCCEE--EEEEECCE
Confidence 97763 455666666665555333334 44444443 67888888743210 1123444544554 88888887
Q ss_pred EEEecC
Q 043707 339 VYCGSS 344 (347)
Q Consensus 339 l~sgs~ 344 (347)
|+....
T Consensus 340 lv~~~~ 345 (693)
T 3iuj_A 340 LFAEYM 345 (693)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776543
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.59 E-value=1.1e-05 Score=73.52 Aligned_cols=178 Identities=7% Similarity=0.072 Sum_probs=106.6
Q ss_pred EEEeecCCEEEEecCCC--cEEEEeCCCcce--ee---ec-CCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCcee
Q 043707 127 YSLAASGDLLYTGSDSK--NIRVWKNLKEFS--GF---KS-NSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVH 198 (347)
Q Consensus 127 ~~l~~~~~~l~tg~~dg--~I~vwd~~~~~~--~~---~~-h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~ 198 (347)
.++.++++.|+.+..++ .|.+|+...... .+ .. ....+.+++++|++..|+.+..++.|+.||..++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 34455677888887766 788887543221 22 12 446688999999545666677789999999987653221
Q ss_pred ee--------------ecccccccceEEeccCCCeEEEEeecc-eeeeeec---------------CCCeeEEEEcCCCC
Q 043707 199 KR--------------VGSLPTFKDYVKSSVNPKNYVEVRRNR-NVLKIRH---------------YDAVSCLSLNAEQG 248 (347)
Q Consensus 199 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h---------------~~~V~~l~~~~~~~ 248 (347)
.. +...+....++........+..+.... .....++ ......+++++++.
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 00 000111111222222222222222111 1122222 23478899999999
Q ss_pred EEEEEe-CCCcEEEEeCCCCEEEEEEecC---------------CCcEEEEEeCCCC-EEEEEeCCCcEEEEEc
Q 043707 249 LLYSGS-WDKTLKVWRISDCKCLESINAH---------------DDAINSVVAGFDS-LVFTGSADGTVKVWRR 305 (347)
Q Consensus 249 ~l~s~s-~dg~i~vwdl~~~~~~~~~~~h---------------~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~ 305 (347)
++++-. .+++|+.||+.+++. ..+.++ -.....|++.+++ ++++-..+++|+.+++
T Consensus 336 lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 777777 789999999888764 444433 2457899999988 4455566788887765
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.56 E-value=3.6e-06 Score=75.65 Aligned_cols=148 Identities=10% Similarity=0.053 Sum_probs=100.8
Q ss_pred ecCCEEEEecC-----CCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEe----------CCCcEEEEecCCC
Q 043707 131 ASGDLLYTGSD-----SKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGH----------QDGKIRIWKVSRK 193 (347)
Q Consensus 131 ~~~~~l~tg~~-----dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~----------~Dg~I~vwd~~~~ 193 (347)
++++.++.... ++.|.+.|.. +.+..+..-..+ .++++|+|++++.+. .++.|.+||..+.
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 56666666654 5789999964 334444443344 499999999888876 3678999999988
Q ss_pred CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCEEEE
Q 043707 194 NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW--DKTLKVWRISDCKCLE 271 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~--dg~i~vwdl~~~~~~~ 271 (347)
+......+..-.. .........++|+|||++|+++.. ++.|.|+|+.+++.+.
T Consensus 120 ~v~~~I~v~~g~r-------------------------~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 120 LPTADIELPDAPR-------------------------FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR 174 (386)
T ss_dssp CEEEEEEETTCCC-------------------------CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred eEEEEEECCCccc-------------------------cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE
Confidence 7544433221000 001224557999999999998874 6899999999999999
Q ss_pred EEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCC
Q 043707 272 SINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 272 ~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~ 309 (347)
++..... ...+ |.+ .+++.+.||++.+.++...+
T Consensus 175 tI~v~g~---~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g 210 (386)
T 3sjl_D 175 MLDVPDC---YHIF-PTAPDTFFMHCRDGSLAKVAFGTEG 210 (386)
T ss_dssp EEECCSE---EEEE-EEETTEEEEEETTSCEEEEECCSSS
T ss_pred EEECCCc---ceee-cCCCceeEEECCCCCEEEEECCCCC
Confidence 9864321 1222 332 66788889999999987533
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.54 E-value=3.5e-06 Score=74.94 Aligned_cols=157 Identities=10% Similarity=0.107 Sum_probs=99.7
Q ss_pred CCeeEEEEeCCCCEEEEEe--CCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCee
Q 043707 162 GLVKAIIITGDSNKIFTGH--QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVS 239 (347)
Q Consensus 162 ~~V~~l~~sp~~~~l~s~~--~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 239 (347)
..+..++++++|+.+++.. .++.++||.+.+++. . ..+... .....+...+.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~---~---~~p~~~--------------------~~~~~~~~~p~ 70 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL---I---PFPPQS--------------------GNAIITFDTVL 70 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE---E---ESCCCC--------------------SSCCCCCSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe---e---cCCCcc--------------------cCcccceeEee
Confidence 6789999999998888864 234467777653321 1 011000 00013567899
Q ss_pred EEEEcCCCCEEEEEeC-----CCcEEEEeCCCCEEEEEEecC------CCcEEEEEeCCC-CEE-EEEe---CCCcEEEE
Q 043707 240 CLSLNAEQGLLYSGSW-----DKTLKVWRISDCKCLESINAH------DDAINSVVAGFD-SLV-FTGS---ADGTVKVW 303 (347)
Q Consensus 240 ~l~~~~~~~~l~s~s~-----dg~i~vwdl~~~~~~~~~~~h------~~~v~~i~~~~~-~~l-~s~~---~dg~I~vw 303 (347)
.++++++++++++-.. ++.|.+||+.+++.+..+... ...+..+++.++ +.+ ++.. .++.|.+|
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 9999999876665433 578999999999987777542 235688999875 544 4444 57899999
Q ss_pred EcccCCccceeeehh--h---------hhc--------------cCCcEEEEEEccCCCEEEEecCCC
Q 043707 304 RRELQGKGTKHFLAQ--V---------LLK--------------QENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 304 d~~~~~~~~~~~~~~--~---------~~~--------------h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
|+..+.. ...... . ..+ -...+..|+|+|+++.|+.+..++
T Consensus 151 d~~~g~~--~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 151 DLQTGLA--ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp ETTTCCE--EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred ECCCCCE--EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 9874321 000000 0 000 012468999999999998876554
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.54 E-value=4.1e-06 Score=75.23 Aligned_cols=221 Identities=11% Similarity=0.075 Sum_probs=124.7
Q ss_pred ceeEeeeeccccEEEEeecCCEEEEec----------CCCcEEEEeCCCc--ceeeecC-------CCCeeEEEEeCCCC
Q 043707 114 GLIGSIVRKEGHIYSLAASGDLLYTGS----------DSKNIRVWKNLKE--FSGFKSN-------SGLVKAIIITGDSN 174 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~~~l~tg~----------~dg~I~vwd~~~~--~~~~~~h-------~~~V~~l~~sp~~~ 174 (347)
+.+.++..-..+-..++++|++|+.+. .++.|.+||.... ...+... ......++|+|||+
T Consensus 70 ~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 70 RVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp EEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred eEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC
Confidence 345555544444367778899777765 3678999996533 3333221 12466799999999
Q ss_pred EEEEEeC--CCcEEEEecCCCCCceeeeecc----cccc-cceEEeccCCCeEEEEeec-ceeeee--ecC----CCe-e
Q 043707 175 KIFTGHQ--DGKIRIWKVSRKNPSVHKRVGS----LPTF-KDYVKSSVNPKNYVEVRRN-RNVLKI--RHY----DAV-S 239 (347)
Q Consensus 175 ~l~s~~~--Dg~I~vwd~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~--~h~----~~V-~ 239 (347)
+++.+.. ++.|.++|+.+++......+.. .|.. ..++..+.++...+..... ...... .+. ..+ .
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~ 229 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLIN 229 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCS
T ss_pred EEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccc
Confidence 9888864 6899999999987654443321 1211 2233333333332222211 121110 111 111 1
Q ss_pred EEEEc-CCCCEEEEEeCCCcEEEEeCCCCE--EEEEEec----------CCCcEEEEEeCCCC-EEEEEeC---------
Q 043707 240 CLSLN-AEQGLLYSGSWDKTLKVWRISDCK--CLESINA----------HDDAINSVVAGFDS-LVFTGSA--------- 296 (347)
Q Consensus 240 ~l~~~-~~~~~l~s~s~dg~i~vwdl~~~~--~~~~~~~----------h~~~v~~i~~~~~~-~l~s~~~--------- 296 (347)
...|. ++|++++ .+.+|++++.|+.... .+..+.. .......+++++++ .++....
T Consensus 230 ~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 230 HPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp CCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred cceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 23554 5665555 5558999999997553 3333320 11223346677776 4444321
Q ss_pred -CCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCC-EEEEe
Q 043707 297 -DGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESA-VVYCG 342 (347)
Q Consensus 297 -dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~-~l~sg 342 (347)
.++|.+.|+.+.+. +..+.. ...+..|++++|++ +|+++
T Consensus 309 ~~~~V~viD~~t~kv------~~~i~v-g~~~~~lavs~D~~~~ly~t 349 (386)
T 3sjl_D 309 ASRFVVVLDAKTGER------LAKFEM-GHEIDSINVSQDEKPLLYAL 349 (386)
T ss_dssp CEEEEEEEETTTCCE------EEEEEE-EEEECEEEECSSSSCEEEEE
T ss_pred CCCEEEEEECCCCeE------EEEEEC-CCCcceEEECCCCCeEEEEE
Confidence 35799999986543 222211 12688999999996 66664
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.52 E-value=1.1e-05 Score=71.80 Aligned_cols=196 Identities=10% Similarity=0.051 Sum_probs=111.5
Q ss_pred ccEEEEee--cCCEEEEec--CCCcEEEEeC-CCcceee-------ecCCCCeeEEEEeCCCCEEEEEeC-----CCcEE
Q 043707 124 GHIYSLAA--SGDLLYTGS--DSKNIRVWKN-LKEFSGF-------KSNSGLVKAIIITGDSNKIFTGHQ-----DGKIR 186 (347)
Q Consensus 124 ~~V~~l~~--~~~~l~tg~--~dg~I~vwd~-~~~~~~~-------~~h~~~V~~l~~sp~~~~l~s~~~-----Dg~I~ 186 (347)
.....++. +|+++++.. .++.++||.+ ...+..+ ..|-..+.++++.++++.+++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 45555554 577887753 2342445542 2222222 124467999999999865555433 57899
Q ss_pred EEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEE-EEe---CCCcEEEE
Q 043707 187 IWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLY-SGS---WDKTLKVW 262 (347)
Q Consensus 187 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-s~s---~dg~i~vw 262 (347)
+||+.+++........... ..+...+..+++++++..++ +.. .++.|.+|
T Consensus 97 ~~d~~tg~~~~~~~~~~~~--------------------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~ 150 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPI--------------------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRV 150 (343)
T ss_dssp EEETTTTEEEEEEECCTTT--------------------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEE
T ss_pred EEECCCCeEEEEEECChhh--------------------------cccccccceEEEecCCCEEEEEcCccCCCCeEEEE
Confidence 9999877533222211000 01334568899998655554 444 57899999
Q ss_pred eCCCCEEEEEEecCC-----------------------------CcEEEEEeCCCC-EEEEEeCCC-cEEEEEcccCCcc
Q 043707 263 RISDCKCLESINAHD-----------------------------DAINSVVAGFDS-LVFTGSADG-TVKVWRRELQGKG 311 (347)
Q Consensus 263 dl~~~~~~~~~~~h~-----------------------------~~v~~i~~~~~~-~l~s~~~dg-~I~vwd~~~~~~~ 311 (347)
|+.+++....+..|. ..++.|+++|++ .|+.+..++ .|..++.......
T Consensus 151 d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 151 DLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL 230 (343)
T ss_dssp ETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT
T ss_pred ECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC
Confidence 998887766554321 235789999998 677666555 5544443211100
Q ss_pred --ceeeehhh--hhccCCcEEEEEEccCCCEEEEecCC
Q 043707 312 --TKHFLAQV--LLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 312 --~~~~~~~~--~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
........ ..++......++++++|.++++...+
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~ 268 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAH 268 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGG
T ss_pred CCChhhhhcceEecccCCCCceEEECCCCCEEEEccCC
Confidence 00000111 11233456678899988877765543
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.51 E-value=2.2e-05 Score=70.70 Aligned_cols=132 Identities=5% Similarity=-0.069 Sum_probs=87.6
Q ss_pred cEEEEeCCC--cceeeecCCCCeeEEEEeCCCCEEEEEe----------CCCcEEEEecCCCCCceeeeecccccccceE
Q 043707 144 NIRVWKNLK--EFSGFKSNSGLVKAIIITGDSNKIFTGH----------QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYV 211 (347)
Q Consensus 144 ~I~vwd~~~--~~~~~~~h~~~V~~l~~sp~~~~l~s~~----------~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~ 211 (347)
.|.++|... .+..+..-..+ .++++|++++++.+. .++.|.+||..+.+......+.....
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~----- 120 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR----- 120 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc-----
Confidence 788888543 23333332233 999999999999886 36789999998765433322210000
Q ss_pred EeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCEEEEE-EecCCCcEEEEEeCCC
Q 043707 212 KSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW--DKTLKVWRISDCKCLES-INAHDDAINSVVAGFD 288 (347)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~--dg~i~vwdl~~~~~~~~-~~~h~~~v~~i~~~~~ 288 (347)
..+......+.|+|++++|+++.. ++.|.++| .+++.+.. +.... . +.+.|+
T Consensus 121 --------------------~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-~---~~~~~~ 175 (373)
T 2mad_H 121 --------------------FDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-C---YHIHPG 175 (373)
T ss_pred --------------------cccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-e---EEEEeC
Confidence 001123457899999999999874 57899999 99998877 65322 2 334444
Q ss_pred C--EEEEEeCCCcEEEEEcccC
Q 043707 289 S--LVFTGSADGTVKVWRRELQ 308 (347)
Q Consensus 289 ~--~l~s~~~dg~I~vwd~~~~ 308 (347)
+ .+++.+.||.+.++|. .+
T Consensus 176 ~~~~~~~~~~dg~~~~vd~-~g 196 (373)
T 2mad_H 176 APSTFYLLCAQGGLAKTDH-AG 196 (373)
T ss_pred CCceEEEEcCCCCEEEEEC-CC
Confidence 3 5667778999999998 44
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.50 E-value=8.3e-07 Score=86.81 Aligned_cols=142 Identities=13% Similarity=0.137 Sum_probs=89.8
Q ss_pred CCCCeeEEEEeCCCCEEEE-----EeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeec
Q 043707 160 NSGLVKAIIITGDSNKIFT-----GHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRH 234 (347)
Q Consensus 160 h~~~V~~l~~sp~~~~l~s-----~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 234 (347)
|...+..++|+|||++|+- |+.+.+|++||+.+++...... .
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~---------------------------------~ 173 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL---------------------------------K 173 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE---------------------------------E
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc---------------------------------C
Confidence 5567889999999998884 3333579999999886322110 0
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCCE----EEEEEec-CCCcEEEEEeCCCC-EE-EEE
Q 043707 235 YDAVSCLSLNAEQGLLYSGSWDKT-------------LKVWRISDCK----CLESINA-HDDAINSVVAGFDS-LV-FTG 294 (347)
Q Consensus 235 ~~~V~~l~~~~~~~~l~s~s~dg~-------------i~vwdl~~~~----~~~~~~~-h~~~v~~i~~~~~~-~l-~s~ 294 (347)
......++|+ |++.|+.++.+.. |++|++.+.. ++..... |...+..+.|+||+ +| ++.
T Consensus 174 ~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 174 DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp EEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred CceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 0112457899 9998888887743 9999997654 3433344 55567889999998 44 443
Q ss_pred e---CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEE
Q 043707 295 S---ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYC 341 (347)
Q Consensus 295 ~---~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~s 341 (347)
. ..+.|+++|+..... ....+..+....... |++++..|+.
T Consensus 253 ~~~~~~~~i~~~d~~~~~~-----~~~~l~~~~~~~~~~-~~~~g~~l~~ 296 (693)
T 3iuj_A 253 ANSTSGNRLYVKDLSQENA-----PLLTVQGDLDADVSL-VDNKGSTLYL 296 (693)
T ss_dssp ESSSSCCEEEEEETTSTTC-----CCEEEECSSSSCEEE-EEEETTEEEE
T ss_pred ccCCCCcEEEEEECCCCCC-----ceEEEeCCCCceEEE-EeccCCEEEE
Confidence 3 235899999875432 122333444444444 5555554443
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.48 E-value=1e-05 Score=73.51 Aligned_cols=181 Identities=12% Similarity=0.123 Sum_probs=114.1
Q ss_pred CC-EEEEecCCCcEEEEeCCCc------ceeee------c-CCCCeeEEEEeCCCCEEEEEeCC------CcEEEEecCC
Q 043707 133 GD-LLYTGSDSKNIRVWKNLKE------FSGFK------S-NSGLVKAIIITGDSNKIFTGHQD------GKIRIWKVSR 192 (347)
Q Consensus 133 ~~-~l~tg~~dg~I~vwd~~~~------~~~~~------~-h~~~V~~l~~sp~~~~l~s~~~D------g~I~vwd~~~ 192 (347)
++ ++++|..+++|+|+|.... .+.+. . -...-..+...|+| .++++..+ |.|.+.|..+
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 44 5666788899999996422 22221 0 11244567888999 77777666 7899999988
Q ss_pred CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe------------------
Q 043707 193 KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS------------------ 254 (347)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s------------------ 254 (347)
.+.......... -..--..+.|+|+++.+++..
T Consensus 174 ~~v~~~~~~~~~-----------------------------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~ 224 (462)
T 2ece_A 174 FEPLGKWEIDRG-----------------------------DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKD 224 (462)
T ss_dssp CCEEEECCSBCT-----------------------------TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHH
T ss_pred CeEEEEEccCCC-----------------------------CccccceEEECCCCCEEEEccCcCccccccccchhhhhh
Confidence 875443332211 111223578899999999886
Q ss_pred -CCCcEEEEeCCCCEEEEEEecCC--CcEEEEEe--CCCC-EEEE-Ee-----CCCcEEEEEcccCCccceeeeh-----
Q 043707 255 -WDKTLKVWRISDCKCLESINAHD--DAINSVVA--GFDS-LVFT-GS-----ADGTVKVWRRELQGKGTKHFLA----- 317 (347)
Q Consensus 255 -~dg~i~vwdl~~~~~~~~~~~h~--~~v~~i~~--~~~~-~l~s-~~-----~dg~I~vwd~~~~~~~~~~~~~----- 317 (347)
.+.+|.+||+.+++.+.++.... .....|.| +|++ ++++ +- .+++|.+|.... +.-.....+
T Consensus 225 ~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~ 303 (462)
T 2ece_A 225 RYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAE 303 (462)
T ss_dssp HSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCE
T ss_pred ccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCc
Confidence 36899999999999888887531 23445555 8987 4444 44 677888877653 210000000
Q ss_pred ---hhh-------hccCCcEEEEEEccCCCEEEEecC
Q 043707 318 ---QVL-------LKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 318 ---~~~-------~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
..+ .+-...+..|.+++||++|+++..
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr 340 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW 340 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET
T ss_pred cccccccccccccccCCCceeEEEECCCCCEEEEEeC
Confidence 000 001245789999999999998764
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.45 E-value=6.9e-06 Score=73.64 Aligned_cols=193 Identities=10% Similarity=0.025 Sum_probs=114.5
Q ss_pred cceeEeeeeccccEEEEeecCCEEEEec----------CCCcEEEEeCC--CcceeeecC-------CCCeeEEEEeCCC
Q 043707 113 NGLIGSIVRKEGHIYSLAASGDLLYTGS----------DSKNIRVWKNL--KEFSGFKSN-------SGLVKAIIITGDS 173 (347)
Q Consensus 113 ~~~i~~l~~h~~~V~~l~~~~~~l~tg~----------~dg~I~vwd~~--~~~~~~~~h-------~~~V~~l~~sp~~ 173 (347)
.+.+.++..-..+-..+.+++++++.+. .++.|.+||.. +....+... ......++++|||
T Consensus 56 ~~v~~~i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG 135 (368)
T 1mda_H 56 GVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS 135 (368)
T ss_dssp TEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS
T ss_pred CeEEEEEeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC
Confidence 4556666554445566778888887775 46889999965 334444432 1246689999999
Q ss_pred CEEEEEeC--CCcEEE--EecCCCCCceeeeecc----cccccce-EEeccC----------------------------
Q 043707 174 NKIFTGHQ--DGKIRI--WKVSRKNPSVHKRVGS----LPTFKDY-VKSSVN---------------------------- 216 (347)
Q Consensus 174 ~~l~s~~~--Dg~I~v--wd~~~~~~~~~~~~~~----~~~~~~~-~~~~~~---------------------------- 216 (347)
++++++.. +..|.+ +|..+ .....+.. .+..... +..+.+
T Consensus 136 k~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~v 212 (368)
T 1mda_H 136 ACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNC 212 (368)
T ss_dssp SCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCB
T ss_pred CEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeC
Confidence 99999875 467888 98865 11111100 0100000 000000
Q ss_pred ---------CCe--------E--EEEeecceeee--ee-----------cCCCeeEEEEcCCCCEEEEEeC---------
Q 043707 217 ---------PKN--------Y--VEVRRNRNVLK--IR-----------HYDAVSCLSLNAEQGLLYSGSW--------- 255 (347)
Q Consensus 217 ---------~~~--------~--~~~~~~~~~~~--~~-----------h~~~V~~l~~~~~~~~l~s~s~--------- 255 (347)
... + ++......... .. .......++++++++.++.+..
T Consensus 213 g~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~ 292 (368)
T 1mda_H 213 SSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA 292 (368)
T ss_dssp CSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSC
T ss_pred CCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccccc
Confidence 000 0 01100000000 00 0011222789999988887643
Q ss_pred CCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC--EEEEEe-CCCcEEEEEcccCC
Q 043707 256 DKTLKVWRISDCKCLESINAHDDAINSVVAGFDS--LVFTGS-ADGTVKVWRRELQG 309 (347)
Q Consensus 256 dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~-~dg~I~vwd~~~~~ 309 (347)
++.+.++|+.+.+.+..+.... ....|++++|+ ++++.. .++.|.++|+.+.+
T Consensus 293 ~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 293 AENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp EEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 2356699999999998887554 57899999997 566666 69999999998654
No 222
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.45 E-value=3.9e-05 Score=64.73 Aligned_cols=191 Identities=10% Similarity=0.075 Sum_probs=116.3
Q ss_pred ceeEeeeecccc--EEEEeecCC-EEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEE
Q 043707 114 GLIGSIVRKEGH--IYSLAASGD-LLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIW 188 (347)
Q Consensus 114 ~~i~~l~~h~~~--V~~l~~~~~-~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vw 188 (347)
+.+.++ .|... ...|.++++ ++.+.+.+|.|+++|.. +....+......-..+++..+ +.....-.++.+.+|
T Consensus 44 ~Vv~~~-phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 44 HIIREY-PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGE-RLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEE-ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSS-CEEEEESSSCEEEEE
T ss_pred EEEEEE-cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCC-EEEEEEccCCEEEEE
Confidence 345555 45443 467777666 55666778899999954 333333111112234555433 344444578899999
Q ss_pred ecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE
Q 043707 189 KVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK 268 (347)
Q Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~ 268 (347)
|..+.+........ ..-..++ +++..|+.+..++.|.++|..+.+
T Consensus 122 D~~Tl~~~~ti~~~---------------------------------~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~ 166 (268)
T 3nok_A 122 SGMPPQRERTTRYS---------------------------------GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA 166 (268)
T ss_dssp ETTTTEEEEEEECS---------------------------------SCCCCEE--EETTEEEEECSSSEEEEECTTTCC
T ss_pred ECCcCcEEEEEeCC---------------------------------CceeEEe--cCCCEEEEECCCCEEEEEcCCCCe
Confidence 99887644333221 1112333 457788887778999999999999
Q ss_pred EEEEEecCC-----CcEEEEEeCCCCEEEEEe-CCCcEEEEEcccCCccceeeehhhhh--------ccCCcEEEEEEcc
Q 043707 269 CLESINAHD-----DAINSVVAGFDSLVFTGS-ADGTVKVWRRELQGKGTKHFLAQVLL--------KQENAITALAVNQ 334 (347)
Q Consensus 269 ~~~~~~~h~-----~~v~~i~~~~~~~l~s~~-~dg~I~vwd~~~~~~~~~~~~~~~~~--------~h~~~V~~l~~~p 334 (347)
.+.++.... ..++.+.|. +|.|++.. .++.|.+.|.+++..... .....+. ......+.|||+|
T Consensus 167 v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~-Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 167 LVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGV-IDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEE-EECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred EEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEE-EECCCCcccccccccCcCCceEEEEEcC
Confidence 988886432 245677777 66555554 688999999986643111 1111111 1234678999999
Q ss_pred CCCEEEEec
Q 043707 335 ESAVVYCGS 343 (347)
Q Consensus 335 ~~~~l~sgs 343 (347)
+++.|+..+
T Consensus 245 ~~~rlfVTG 253 (268)
T 3nok_A 245 GSGRIFMTG 253 (268)
T ss_dssp TTCCEEEEE
T ss_pred CCCEEEEeC
Confidence 875555544
No 223
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.44 E-value=1.2e-05 Score=78.45 Aligned_cols=81 Identities=16% Similarity=0.114 Sum_probs=52.3
Q ss_pred CCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhh-ccCCcEEEEEEcc
Q 043707 256 DKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLL-KQENAITALAVNQ 334 (347)
Q Consensus 256 dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~-~h~~~V~~l~~~p 334 (347)
+|+|+.||+.+++.+-+++.+...........+++++.++.||.|+.||.++++. +..+. .+.....-+.|..
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~------lw~~~~~~~~~~~p~ty~~ 527 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEK------LWEQPAASGVMAAPVTYSV 527 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE------EEEEECSSCCCSCCEEEEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCcc------ceeeeCCCCcccCceEEEE
Confidence 4789999999999988887554322222223456999999999999999987653 22222 2222223466677
Q ss_pred CCC-EEEEe
Q 043707 335 ESA-VVYCG 342 (347)
Q Consensus 335 ~~~-~l~sg 342 (347)
+|+ ++++.
T Consensus 528 ~G~qyv~~~ 536 (689)
T 1yiq_A 528 DGEQYVTFM 536 (689)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEE
Confidence 885 44433
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.38 E-value=5.8e-05 Score=64.22 Aligned_cols=100 Identities=13% Similarity=0.080 Sum_probs=67.0
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCC-----CcEEEEEeCCCCEEEEE-eCCCcEEEEEcccCCccceeee
Q 043707 243 LNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHD-----DAINSVVAGFDSLVFTG-SADGTVKVWRRELQGKGTKHFL 316 (347)
Q Consensus 243 ~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~-----~~v~~i~~~~~~~l~s~-~~dg~I~vwd~~~~~~~~~~~~ 316 (347)
+.++++.|+++..+++|.++|..+.+.+..+.... ..++.+.|. ++.+++. ..++.|.+.|..++.. .....
T Consensus 112 lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V-~~~I~ 189 (266)
T 2iwa_A 112 LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTL-LGWIL 189 (266)
T ss_dssp EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCE-EEEEE
T ss_pred EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcE-EEEEE
Confidence 45577777777778999999999999888876332 136778887 6755544 4688999999986543 11111
Q ss_pred hhhhh------cc--CCcEEEEEEccCCCEEEEecC
Q 043707 317 AQVLL------KQ--ENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 317 ~~~~~------~h--~~~V~~l~~~p~~~~l~sgs~ 344 (347)
...+. .+ ......|+|+|+++.|++++.
T Consensus 190 ~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 190 LPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp CHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred CCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 11111 11 246799999999976666553
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.38 E-value=1.7e-05 Score=72.40 Aligned_cols=195 Identities=10% Similarity=0.064 Sum_probs=117.2
Q ss_pred ceeEeeeeccccEEEEeecCCEEEEec----------CCCcEEEEeCCCc--ceeeecC-------CCCeeEEEEeCCCC
Q 043707 114 GLIGSIVRKEGHIYSLAASGDLLYTGS----------DSKNIRVWKNLKE--FSGFKSN-------SGLVKAIIITGDSN 174 (347)
Q Consensus 114 ~~i~~l~~h~~~V~~l~~~~~~l~tg~----------~dg~I~vwd~~~~--~~~~~~h-------~~~V~~l~~sp~~~ 174 (347)
+.+.++..-..+-..+++++++|+.+. .++.|.++|.... ...+.-- ......++|+|+|+
T Consensus 110 ~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk 189 (426)
T 3c75_H 110 RILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNK 189 (426)
T ss_dssp EEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSS
T ss_pred EEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCC
Confidence 345555443334456677888777775 4678999996533 3333211 13456789999999
Q ss_pred EEEEEeC--CCcEEEEecCCCCCceeeeeccc----ccc-cceEEeccCCCeE---------------------------
Q 043707 175 KIFTGHQ--DGKIRIWKVSRKNPSVHKRVGSL----PTF-KDYVKSSVNPKNY--------------------------- 220 (347)
Q Consensus 175 ~l~s~~~--Dg~I~vwd~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~--------------------------- 220 (347)
+++.+.. ++.|.+.|+.+.+......+... +.. ..++..+.++...
T Consensus 190 ~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~ 269 (426)
T 3c75_H 190 NLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINH 269 (426)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSC
T ss_pred EEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeE
Confidence 9999874 57899999998875444333210 100 1111111111100
Q ss_pred ----------EEEeecceeeeee------------------------cCCCeeEEEEcCCCCEEEEEeC----------C
Q 043707 221 ----------VEVRRNRNVLKIR------------------------HYDAVSCLSLNAEQGLLYSGSW----------D 256 (347)
Q Consensus 221 ----------~~~~~~~~~~~~~------------------------h~~~V~~l~~~~~~~~l~s~s~----------d 256 (347)
+..........+. .......++++++++.+++... +
T Consensus 270 ~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 270 PAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp CEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 0000000000000 0011123688998887777642 3
Q ss_pred CcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC--EEEEEe-CCCcEEEEEcccCC
Q 043707 257 KTLKVWRISDCKCLESINAHDDAINSVVAGFDS--LVFTGS-ADGTVKVWRRELQG 309 (347)
Q Consensus 257 g~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~-~dg~I~vwd~~~~~ 309 (347)
+.|.+.|+.+.+.+.++.... ....|+|+||+ ++++.. .++.|.|+|+.+.+
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 579999999999999987433 47889999997 577766 59999999998654
No 226
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.36 E-value=1.5e-05 Score=69.53 Aligned_cols=146 Identities=8% Similarity=0.075 Sum_probs=92.8
Q ss_pred eecCCCCeeEEEEeCCCC-EEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecC
Q 043707 157 FKSNSGLVKAIIITGDSN-KIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHY 235 (347)
Q Consensus 157 ~~~h~~~V~~l~~sp~~~-~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 235 (347)
+..........+|+|+++ .+++...++.|..|+.. ++... . ..+.
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~~-~--------------------------------~~~~ 85 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVDV-L--------------------------------LDAT 85 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEEE-E--------------------------------EESC
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEEE-E--------------------------------eCCC
Confidence 333445678899999988 56777788999999873 32110 0 1244
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecC----CCcEEEEEeCCCCEEEE-----EeC----------
Q 043707 236 DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAH----DDAINSVVAGFDSLVFT-----GSA---------- 296 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h----~~~v~~i~~~~~~~l~s-----~~~---------- 296 (347)
..+..++++++++++++...++.|.+|+.. ++........ ...++.+++.++|.+.. |..
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~ 164 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADP 164 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCC
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccc
Confidence 568899999999977666566889999986 5432221111 13467899999984444 332
Q ss_pred ---CCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 297 ---DGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 297 ---dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
.+.|..||...+.. . .+. .......++|+|+++.|+.+..+
T Consensus 165 ~~~~~~v~~~d~~~g~~--~-----~~~-~~~~p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 165 ELAHHSVYRLPPDGSPL--Q-----RMA-DLDHPNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp SSSCEEEEEECSSSCCC--E-----EEE-EESSEEEEEECTTSSEEEEEECC
T ss_pred ccCCCeEEEEcCCCCcE--E-----EEe-cCCCCcceEEcCCCCEEEEEecC
Confidence 24566666543221 1 111 33456889999999988776543
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.35 E-value=3.9e-05 Score=64.72 Aligned_cols=98 Identities=10% Similarity=0.083 Sum_probs=65.3
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCC-----CcEEEEEeCCCCEEEEEe-CCCcEEEEEcccCCccceeeehh
Q 043707 245 AEQGLLYSGSWDKTLKVWRISDCKCLESINAHD-----DAINSVVAGFDSLVFTGS-ADGTVKVWRRELQGKGTKHFLAQ 318 (347)
Q Consensus 245 ~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~-----~~v~~i~~~~~~~l~s~~-~dg~I~vwd~~~~~~~~~~~~~~ 318 (347)
+++..|+.+..++.|.++|..+.+.+.++.... ..++.+.|. ++.|++.. .++.|.+.|.+++..... ....
T Consensus 134 ~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~-Id~~ 211 (262)
T 3nol_A 134 HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGI-IDLN 211 (262)
T ss_dssp ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEE-EECT
T ss_pred cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEE-EECC
Confidence 466777776667889999999999888876432 335567776 66555554 688999999986543111 1111
Q ss_pred hhhc-------cCCcEEEEEEccCCCEEEEecC
Q 043707 319 VLLK-------QENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 319 ~~~~-------h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.+.. .....+.|||+|+++.|+..+.
T Consensus 212 ~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 212 GILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 1111 1245789999999877777664
No 228
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.35 E-value=4.3e-05 Score=67.30 Aligned_cols=144 Identities=8% Similarity=-0.011 Sum_probs=90.2
Q ss_pred cEEEEee--cCCEEEEecC------CCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEEEE-eCCCcEEEEecC--CC
Q 043707 125 HIYSLAA--SGDLLYTGSD------SKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIFTG-HQDGKIRIWKVS--RK 193 (347)
Q Consensus 125 ~V~~l~~--~~~~l~tg~~------dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~-~~Dg~I~vwd~~--~~ 193 (347)
.+.++.+ +|+++++... .+.|+.++ ......+..+......++|+|+++.++.+ ..++.|.+||+. ++
T Consensus 135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 3555554 4666554432 24566666 33333333334467899999999876554 457899999986 33
Q ss_pred -CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Q 043707 194 -NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLES 272 (347)
Q Consensus 194 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~ 272 (347)
............ .....+..+++.+++.+.++...++.|.+||. +++.+..
T Consensus 214 l~~~~~~~~~~~~---------------------------~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~ 265 (326)
T 2ghs_A 214 LPTGKAEVFIDST---------------------------GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIAR 265 (326)
T ss_dssp CBSSCCEEEEECT---------------------------TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEE
T ss_pred CcccCceEEEECC---------------------------CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEE
Confidence 211100000000 12234567899999987777766789999998 6777888
Q ss_pred EecCCCcEEEEEeC-CCC-EEE-EEeCC
Q 043707 273 INAHDDAINSVVAG-FDS-LVF-TGSAD 297 (347)
Q Consensus 273 ~~~h~~~v~~i~~~-~~~-~l~-s~~~d 297 (347)
+..+...+.+++|. +++ .|+ +...+
T Consensus 266 i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 266 YEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 88777789999997 775 444 44333
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.34 E-value=3.1e-05 Score=70.41 Aligned_cols=179 Identities=11% Similarity=0.172 Sum_probs=110.1
Q ss_pred ecCCEEEEecCC------CcEEEEeCC--CcceeeecC---CCCeeEEEEeCCCCEEEEEe-------------------
Q 043707 131 ASGDLLYTGSDS------KNIRVWKNL--KEFSGFKSN---SGLVKAIIITGDSNKIFTGH------------------- 180 (347)
Q Consensus 131 ~~~~~l~tg~~d------g~I~vwd~~--~~~~~~~~h---~~~V~~l~~sp~~~~l~s~~------------------- 180 (347)
++| +++++..+ |.|.++|.. +.+..+..- ...-+.+.|+|+++.+++..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 567 77766555 789999954 334444321 12345688999999888884
Q ss_pred CCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEE--cCCCCEEEEEe----
Q 043707 181 QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSL--NAEQGLLYSGS---- 254 (347)
Q Consensus 181 ~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~--~~~~~~l~s~s---- 254 (347)
.+.+|.+||+.+++......++. .......+.| +|+++++++++
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~------------------------------~g~~P~~i~f~~~Pdg~~aYV~~e~~~ 275 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGE------------------------------ENRMALELRPLHDPTKLMGFINMVVSL 275 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCT------------------------------TEEEEEEEEECSSTTCCEEEEEEEEET
T ss_pred cCCEEEEEECCCCcEeeEEecCC------------------------------CCCccceeEeeECCCCCEEEEEEeeec
Confidence 46899999998764322222210 0112334445 99999888877
Q ss_pred --CCCcEEEEeCCCCEE--EEEE--ecC----------------CCcEEEEEeCCCC-EEE-EEeCCCcEEEEEcccCCc
Q 043707 255 --WDKTLKVWRISDCKC--LESI--NAH----------------DDAINSVVAGFDS-LVF-TGSADGTVKVWRRELQGK 310 (347)
Q Consensus 255 --~dg~i~vwdl~~~~~--~~~~--~~h----------------~~~v~~i~~~~~~-~l~-s~~~dg~I~vwd~~~~~~ 310 (347)
.+++|.+|....++. ++.+ ... ......|.+++|+ +|+ +.-..+.|.+||+.....
T Consensus 276 ~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~ 355 (462)
T 2ece_A 276 KDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFK 355 (462)
T ss_dssp TTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTS
T ss_pred cCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 466888877655431 1211 110 1346788999998 444 444588999999863322
Q ss_pred cceeeehhhhhcc--------------CCcEEEEEEccCCCEEEEec
Q 043707 311 GTKHFLAQVLLKQ--------------ENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 311 ~~~~~~~~~~~~h--------------~~~V~~l~~~p~~~~l~sgs 343 (347)
..+...+... ......++++|||++|+++.
T Consensus 356 ---~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 356 ---PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp ---CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ---cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 1112211111 11357899999999999886
No 230
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.25 E-value=0.00098 Score=57.90 Aligned_cols=209 Identities=11% Similarity=0.073 Sum_probs=111.9
Q ss_pred EeecCCEEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEEEEeCCC--cEEEEecCCCCCceeeeecc--c
Q 043707 129 LAASGDLLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDG--KIRIWKVSRKNPSVHKRVGS--L 204 (347)
Q Consensus 129 l~~~~~~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg--~I~vwd~~~~~~~~~~~~~~--~ 204 (347)
+..+++++++-..++.|..||.......+......+.++++.++++.+++..... .|..+|..+++......... .
T Consensus 39 ~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~ 118 (306)
T 2p4o_A 39 SAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIF 118 (306)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSC
T ss_pred ECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccc
Confidence 3345777777778899999986544433333345788999999998665554332 36666666665322211111 0
Q ss_pred ccc------cceEEeccCCCeEEEEeecc--eeeee-----------ecCCCeeEEEEcCCCCEEEEEe-CCCcEEEEeC
Q 043707 205 PTF------KDYVKSSVNPKNYVEVRRNR--NVLKI-----------RHYDAVSCLSLNAEQGLLYSGS-WDKTLKVWRI 264 (347)
Q Consensus 205 ~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~-----------~h~~~V~~l~~~~~~~~l~s~s-~dg~i~vwdl 264 (347)
+.. ...+........++.+.... ..... ........| +++++.|+.+. ..++|.++|+
T Consensus 119 ~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~ 196 (306)
T 2p4o_A 119 LNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPV 196 (306)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEB
T ss_pred cCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEe
Confidence 000 01122222222333332211 01110 111233445 77777666554 5678999998
Q ss_pred CC-CEE--EEEEecCCCcEEEEEeCCCCEEE-EEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEc---cCCC
Q 043707 265 SD-CKC--LESINAHDDAINSVVAGFDSLVF-TGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVN---QESA 337 (347)
Q Consensus 265 ~~-~~~--~~~~~~h~~~v~~i~~~~~~~l~-s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~---p~~~ 337 (347)
.. ++. ...+.. ......+++.++|.|+ +....+.|.++|.. ++ . .....+.......++++|. |+++
T Consensus 197 ~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~--G~--~-~~~~~~~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 197 DSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD--RS--T-TIIAQAEQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp CTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT--CC--E-EEEECGGGTCTTEEEEEECCSTTTTT
T ss_pred CCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC--CC--E-EEEeecccccCCceEEEEecccCCCC
Confidence 64 321 112211 1234567888888444 44457889999875 22 1 1111222233568999998 8988
Q ss_pred EEEEecCC
Q 043707 338 VVYCGSSD 345 (347)
Q Consensus 338 ~l~sgs~D 345 (347)
.|+.+...
T Consensus 271 ~LyVt~~~ 278 (306)
T 2p4o_A 271 AIYVVTNG 278 (306)
T ss_dssp EEEEEECT
T ss_pred EEEEECCC
Confidence 77776654
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.25 E-value=4.6e-05 Score=69.52 Aligned_cols=145 Identities=8% Similarity=-0.004 Sum_probs=96.1
Q ss_pred ecCCEEEEecC-C----CcEEEEeCCC--cceeeecCCCCeeEEEEeCCCCEEEEEe----------CCCcEEEEecCCC
Q 043707 131 ASGDLLYTGSD-S----KNIRVWKNLK--EFSGFKSNSGLVKAIIITGDSNKIFTGH----------QDGKIRIWKVSRK 193 (347)
Q Consensus 131 ~~~~~l~tg~~-d----g~I~vwd~~~--~~~~~~~h~~~V~~l~~sp~~~~l~s~~----------~Dg~I~vwd~~~~ 193 (347)
++++.++.... + +.|.++|..+ .+..+..-..+ .++++|++++++.+. .++.|.++|..+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 35665555544 2 6999999653 34444433344 899999999888886 4678999999988
Q ss_pred CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCEEEE
Q 043707 194 NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW--DKTLKVWRISDCKCLE 271 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~--dg~i~vwdl~~~~~~~ 271 (347)
+......+...... ........+.|+||+++|+++.. ++.|.+.|+.+++.+.
T Consensus 160 ~vv~~I~v~g~~r~-------------------------~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~ 214 (426)
T 3c75_H 160 LPIADIELPDAPRF-------------------------LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDR 214 (426)
T ss_dssp CEEEEEEETTCCCC-------------------------CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred cEEEEEECCCcccc-------------------------ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEE
Confidence 75444333200000 01123456899999999999875 5789999999999998
Q ss_pred EEecCCCcEEEEEeCCC--CEEEEEeCCCcEEEEEcc
Q 043707 272 SINAHDDAINSVVAGFD--SLVFTGSADGTVKVWRRE 306 (347)
Q Consensus 272 ~~~~h~~~v~~i~~~~~--~~l~s~~~dg~I~vwd~~ 306 (347)
++..... ....|+ ..+++.+.||++.+.+..
T Consensus 215 ~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 215 MLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp EEECCSE----EEEEEEETTEEEEEETTSSEEEEECC
T ss_pred EEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECC
Confidence 8874321 222233 255566677887777773
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.23 E-value=2.3e-05 Score=68.63 Aligned_cols=200 Identities=16% Similarity=0.161 Sum_probs=116.1
Q ss_pred CCEEEEecCCCcEEEEeCC-CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccc------
Q 043707 133 GDLLYTGSDSKNIRVWKNL-KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLP------ 205 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~-~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~------ 205 (347)
+..|+.++.++.|..+|.. +....+......+.++...+++. ++.++.++.|..+|.. ++...........
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 6667777777888888754 44444444555566677776664 5667777888888877 5433222211100
Q ss_pred -cccceEEeccCCCeEEEEeecceeeee--ecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEE
Q 043707 206 -TFKDYVKSSVNPKNYVEVRRNRNVLKI--RHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINS 282 (347)
Q Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~ 282 (347)
....++... ..+..+.......+. .....+.++...+++. |+.++.++.|..+|. +++.+..+......+..
T Consensus 185 d~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~ 259 (330)
T 3hxj_A 185 GKDGTIYFGS---DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESS 259 (330)
T ss_dssp CTTCCEEEES---SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSC
T ss_pred cCCCEEEEEe---CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCcccc
Confidence 011122222 222222222122221 1234577888887765 556677888999984 66666666655554555
Q ss_pred EEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCCC
Q 043707 283 VVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDGL 347 (347)
Q Consensus 283 i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG~ 347 (347)
+...+++.|..++.+|.|..+|.. +.. ..........+.++...+++. |..++.+|.
T Consensus 260 ~~~~~~g~l~v~t~~ggl~~~d~~-g~~------~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~ 316 (330)
T 3hxj_A 260 PVIGNTDTIYFGSYDGHLYAINPD-GTE------KWNFETGSWIIATPVIDENGT-IYFGTRNGK 316 (330)
T ss_dssp CEECTTSCEEEECTTCEEEEECTT-SCE------EEEEECSSCCCSCCEECTTCC-EEEECTTSC
T ss_pred ceEcCCCeEEEecCCCCEEEECCC-CcE------EEEEEcCCccccceEEcCCCE-EEEEcCCCe
Confidence 666667888889999999999853 221 111222344566777777776 455666763
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.23 E-value=0.00028 Score=58.91 Aligned_cols=98 Identities=10% Similarity=0.125 Sum_probs=64.8
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCC-----CcEEEEEeCCCCEEEEEe-CCCcEEEEEcccCCccceeeehh
Q 043707 245 AEQGLLYSGSWDKTLKVWRISDCKCLESINAHD-----DAINSVVAGFDSLVFTGS-ADGTVKVWRRELQGKGTKHFLAQ 318 (347)
Q Consensus 245 ~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~-----~~v~~i~~~~~~~l~s~~-~dg~I~vwd~~~~~~~~~~~~~~ 318 (347)
+++..|+.+..++.|.++|..+.+.+.+++... ..++.+.|. ++.|++.. .+..|.+.|.+++... ......
T Consensus 112 ~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~-~~idl~ 189 (243)
T 3mbr_X 112 SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVV-AWIDLQ 189 (243)
T ss_dssp ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEE-EEEECG
T ss_pred eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEE-EEEECC
Confidence 456667777778999999999999988886432 345677776 56444444 6789999999865431 111111
Q ss_pred hhh--------ccCCcEEEEEEccCCCEEEEecC
Q 043707 319 VLL--------KQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 319 ~~~--------~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.+. ......+.||++|+++.|+..+.
T Consensus 190 ~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 190 ALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp GGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 111 12346789999998877666553
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.18 E-value=7.2e-05 Score=72.79 Aligned_cols=78 Identities=15% Similarity=0.104 Sum_probs=49.8
Q ss_pred CcEEEEeCCCCEEEEEEecCCCcEEEEEeC-CCCEEEEEeCCCcEEEEEcccCCccceeeehhhhh-ccCCcEEEEEEcc
Q 043707 257 KTLKVWRISDCKCLESINAHDDAINSVVAG-FDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLL-KQENAITALAVNQ 334 (347)
Q Consensus 257 g~i~vwdl~~~~~~~~~~~h~~~v~~i~~~-~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~-~h~~~V~~l~~~p 334 (347)
|.|..||+.+++.+-+++.. ..+....+. .+++++.++.||.|++||+++++. +..+. .+.....-+.|..
T Consensus 457 g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~------lw~~~~~~~~~~~p~~y~~ 529 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK------LWEAPTGTGVVAAPSTYMV 529 (677)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE------EEEEECSSCCCSCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCce------eeeeeCCCCcccCCEEEEe
Confidence 78999999999998887633 233333333 345888899999999999987653 22221 2222223455667
Q ss_pred CCCEEEE
Q 043707 335 ESAVVYC 341 (347)
Q Consensus 335 ~~~~l~s 341 (347)
+|+.+++
T Consensus 530 ~G~~~v~ 536 (677)
T 1kb0_A 530 DGRQYVS 536 (677)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 7754433
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.15 E-value=2.9e-05 Score=67.92 Aligned_cols=172 Identities=12% Similarity=0.086 Sum_probs=98.2
Q ss_pred cEEEEeec-CCEEEEecCCCcEEEEeCC-CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec
Q 043707 125 HIYSLAAS-GDLLYTGSDSKNIRVWKNL-KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG 202 (347)
Q Consensus 125 ~V~~l~~~-~~~l~tg~~dg~I~vwd~~-~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~ 202 (347)
.+.++..+ ...|+.++.+ |..+|.. +....+...........+. ++ .|+.++.++.|..+|.. ++........
T Consensus 61 ~~~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~-~~-~l~v~t~~~~l~~~d~~-g~~~~~~~~~ 135 (330)
T 3hxj_A 61 IECRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTIF-ED-ILYVTSMDGHLYAINTD-GTEKWRFKTK 135 (330)
T ss_dssp EEECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEEE-TT-EEEEECTTSEEEEECTT-SCEEEEEECS
T ss_pred cccceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceEE-CC-EEEEEecCCEEEEEcCC-CCEEEEEcCC
Confidence 34555554 4566667665 8899844 3333443333333334444 66 67778888999999988 5544333222
Q ss_pred ccc------cccceEEeccCCCeEEEEeecceeee--eecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEe
Q 043707 203 SLP------TFKDYVKSSVNPKNYVEVRRNRNVLK--IRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESIN 274 (347)
Q Consensus 203 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~ 274 (347)
... .....+........+..+.......+ ......+.++...+++.++ .++ +.|..+| .+++.+..+.
T Consensus 136 ~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t--~~l~~~d-~~g~~~~~~~ 211 (330)
T 3hxj_A 136 KAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIY-FGS--DKVYAIN-PDGTEKWNFY 211 (330)
T ss_dssp SCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEE-EES--SSEEEEC-TTSCEEEEEC
T ss_pred CceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEE-EEe--CEEEEEC-CCCcEEEEEc
Confidence 110 00111111222222322222222111 1123456667777777644 444 7899999 7888777777
Q ss_pred cCCCcEEEEEeCCCCEEEEEeCCCcEEEEEc
Q 043707 275 AHDDAINSVVAGFDSLVFTGSADGTVKVWRR 305 (347)
Q Consensus 275 ~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~ 305 (347)
.....+.++...+++.|..++.++.|..+|.
T Consensus 212 ~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 212 AGYWTVTRPAISEDGTIYVTSLDGHLYAINP 242 (330)
T ss_dssp CSSCCCSCCEECTTSCEEEEETTTEEEEECT
T ss_pred cCCcceeceEECCCCeEEEEcCCCeEEEECC
Confidence 6666788888888888888888888888875
No 236
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.13 E-value=0.00038 Score=62.25 Aligned_cols=172 Identities=10% Similarity=0.113 Sum_probs=98.7
Q ss_pred CCEEEEecCCCcEEEEeCCC--cceeeecCCCCe-----eEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecc--
Q 043707 133 GDLLYTGSDSKNIRVWKNLK--EFSGFKSNSGLV-----KAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGS-- 203 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~~--~~~~~~~h~~~V-----~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~-- 203 (347)
+..++.++.++.|+.+|... ....+....... ...... +..++.+..++.|..+|..+++.........
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCC
Confidence 45788888899999999543 333332211110 122222 3478888889999999999887654433221
Q ss_pred -------------cccc-cceEEeccCCCeEEEEee-cceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE
Q 043707 204 -------------LPTF-KDYVKSSVNPKNYVEVRR-NRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK 268 (347)
Q Consensus 204 -------------~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~ 268 (347)
.+.. ...+........+..+.. .....+.........+.. ++..++.++.++.+..+|.++++
T Consensus 221 ~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~ 298 (376)
T 3q7m_A 221 GSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGV 298 (376)
T ss_dssp ---------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCC
T ss_pred CCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCc
Confidence 1110 111111111222222221 223333333333444444 36688888899999999999999
Q ss_pred EEEEEecC-CCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCC
Q 043707 269 CLESINAH-DDAINSVVAGFDSLVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 269 ~~~~~~~h-~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~ 309 (347)
.+-..... ...+..... .++.|+.++.+|.|.++|.+++.
T Consensus 299 ~~w~~~~~~~~~~~~~~~-~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 299 TLWTQSDLLHRLLTSPVL-YNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEEEECTTTTSCCCCCEE-ETTEEEEECTTSEEEEEETTTCC
T ss_pred EEEeecccCCCcccCCEE-ECCEEEEEeCCCeEEEEECCCCc
Confidence 87766522 222222222 25688899999999999998654
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.12 E-value=2.6e-07 Score=83.29 Aligned_cols=131 Identities=15% Similarity=0.137 Sum_probs=65.8
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEE
Q 043707 172 DSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLY 251 (347)
Q Consensus 172 ~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~ 251 (347)
++..+++++.||.|+.||..+++....... ..+.+..+..++..++
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----------------------------------~~~~s~p~~~~g~~~v 53 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----------------------------------DPVLQVPTHVEEPAFL 53 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----------------------------------CCSCCCC-----CCEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----------------------------------CCceecceEcCCCEEE
Confidence 466999999999999999999875433221 2222333345666778
Q ss_pred EEeCCCcEEEEeCCCCEEEEEEecCCC-cEE-EEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEE
Q 043707 252 SGSWDKTLKVWRISDCKCLESINAHDD-AIN-SVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITA 329 (347)
Q Consensus 252 s~s~dg~i~vwdl~~~~~~~~~~~h~~-~v~-~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~ 329 (347)
+++.||.|+.||.++++.+..+..+.. .+. +.....++.|++++.|+.|+.||.+++.. ...+..+. .
T Consensus 54 ~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~------~w~~~~~~----~ 123 (369)
T 2hz6_A 54 PDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEK------QQTLSSAF----A 123 (369)
T ss_dssp ECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC-----------------------
T ss_pred EeCCCCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcE------EEEecCCC----c
Confidence 888999999999999988766654321 111 11112356788888999999999986543 22222222 2
Q ss_pred EEEccCCCEEEEecCCC
Q 043707 330 LAVNQESAVVYCGSSDG 346 (347)
Q Consensus 330 l~~~p~~~~l~sgs~DG 346 (347)
..++|++..|++++.||
T Consensus 124 ~~~~p~~~~v~~~~~dg 140 (369)
T 2hz6_A 124 DSLSPSTSLLYLGRTEY 140 (369)
T ss_dssp ---------EEEEEEEE
T ss_pred ccccccCCEEEEEecCC
Confidence 34556777888777654
No 238
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.07 E-value=0.001 Score=58.19 Aligned_cols=180 Identities=9% Similarity=0.075 Sum_probs=105.2
Q ss_pred EEeecCCEEEEecCCCcEEEEeCCC-cceeeec--------------------CCCCeeEEEEeC-CCCEEEEEeCCCcE
Q 043707 128 SLAASGDLLYTGSDSKNIRVWKNLK-EFSGFKS--------------------NSGLVKAIIITG-DSNKIFTGHQDGKI 185 (347)
Q Consensus 128 ~l~~~~~~l~tg~~dg~I~vwd~~~-~~~~~~~--------------------h~~~V~~l~~sp-~~~~l~s~~~Dg~I 185 (347)
++..++++++++..++.|..|+... .+..+.. ....+.+|++.+ ++ .|+.+...+.|
T Consensus 25 ~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d~~~~i 103 (322)
T 2fp8_A 25 TFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVDCYYHL 103 (322)
T ss_dssp ECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEETTTEE
T ss_pred EEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEECCCCE
Confidence 3445567778888888999998543 2333221 113578999998 55 56666555557
Q ss_pred EEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC-CCCEEEEEeC---------
Q 043707 186 RIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA-EQGLLYSGSW--------- 255 (347)
Q Consensus 186 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~--------- 255 (347)
..+|..++........ .. . ........+++.+ +++++++-..
T Consensus 104 ~~~d~~~g~~~~~~~~--~~---------------------~-----~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 104 SVVGSEGGHATQLATS--VD---------------------G-----VPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp EEECTTCEECEEEESE--ET---------------------T-----EECSCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred EEEeCCCCEEEEeccc--CC---------------------C-----CcccccceEEEecCCCEEEEECCcccccccccc
Confidence 8887664421111000 00 0 0123466788999 8877666432
Q ss_pred --------CCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEE-eCCCcEEEEEcccCCccceeeehhhhhccCC
Q 043707 256 --------DKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTG-SADGTVKVWRRELQGKGTKHFLAQVLLKQEN 325 (347)
Q Consensus 256 --------dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~-~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~ 325 (347)
++.|..||..+++...... .-...+.|++++++ .|+.+ ...+.|.+|++......... ....+ ..
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~-~~~~~---~g 230 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAE-VLVKI---PN 230 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEE-EEEEC---SS
T ss_pred eehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccc-eEEeC---CC
Confidence 3678899987776433222 12335678999997 45544 56789999998742111111 11111 22
Q ss_pred cEEEEEEccCCCEEEEe
Q 043707 326 AITALAVNQESAVVYCG 342 (347)
Q Consensus 326 ~V~~l~~~p~~~~l~sg 342 (347)
...|++.++|++.++.
T Consensus 231 -P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 231 -PGNIKRNADGHFWVSS 246 (322)
T ss_dssp -EEEEEECTTSCEEEEE
T ss_pred -CCCeEECCCCCEEEEe
Confidence 6788899988766654
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.06 E-value=0.00015 Score=65.01 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=89.9
Q ss_pred CCEEEEecCCCcEEEEeCCCcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEE
Q 043707 133 GDLLYTGSDSKNIRVWKNLKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVK 212 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~ 212 (347)
+..++.++.++.|..+|.................+... +..++.++.++.|..+|..+++........
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~---------- 306 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQSDL---------- 306 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEECTT----------
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEeeccc----------
Confidence 55677788888999998654333333333344455543 458888888999999999888643222100
Q ss_pred eccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEE
Q 043707 213 SSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVF 292 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~ 292 (347)
....+..... .+..|+.++.+|.+.++|.++++.+..+......+.......++.|+
T Consensus 307 ---------------------~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~~~~l~ 363 (376)
T 3q7m_A 307 ---------------------LHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLL 363 (376)
T ss_dssp ---------------------TTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEETTEEE
T ss_pred ---------------------CCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEECCEEE
Confidence 0111111222 24688899999999999999999988877644333322112367889
Q ss_pred EEeCCCcEEEEEc
Q 043707 293 TGSADGTVKVWRR 305 (347)
Q Consensus 293 s~~~dg~I~vwd~ 305 (347)
.++.+|.|..|+.
T Consensus 364 v~~~~G~l~~~~~ 376 (376)
T 3q7m_A 364 IQAKDGTVYSITR 376 (376)
T ss_dssp EEBTTSCEEEEEC
T ss_pred EEeCCCEEEEEeC
Confidence 9999999999873
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.02 E-value=0.00093 Score=56.69 Aligned_cols=145 Identities=6% Similarity=0.032 Sum_probs=89.0
Q ss_pred CCeeEEEEeCCCCEEEE-EeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeE
Q 043707 162 GLVKAIIITGDSNKIFT-GHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSC 240 (347)
Q Consensus 162 ~~V~~l~~sp~~~~l~s-~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 240 (347)
..+.+++|++++..|+. -...+.|.+++......... .. ........
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~--~~------------------------------~~~~~p~~ 83 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTI--IR------------------------------QDLGSPEG 83 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE--EC------------------------------TTCCCEEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEE--EE------------------------------CCCCCccE
Confidence 45789999996555554 44678999999876532110 00 12245788
Q ss_pred EEEcCCCCEEEEEe-CCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEeC---CCcEEEEEcccCCccceee
Q 043707 241 LSLNAEQGLLYSGS-WDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGSA---DGTVKVWRRELQGKGTKHF 315 (347)
Q Consensus 241 l~~~~~~~~l~s~s-~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~~---dg~I~vwd~~~~~~~~~~~ 315 (347)
+++++++..|+.+. ..+.|.++++........+.........++++|+ +.|+.+.. .+.|..+++..... . .
T Consensus 84 ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~--~-~ 160 (267)
T 1npe_A 84 IALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR--R-I 160 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC--E-E
T ss_pred EEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc--E-E
Confidence 99999766555554 4678999998643222222222245789999985 66555543 46888888752211 1 1
Q ss_pred ehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 316 LAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 316 ~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.. .........++++++++.|+.+..
T Consensus 161 ~~---~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 161 LA---QDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp EE---CTTCSCEEEEEEETTTTEEEEEET
T ss_pred EE---ECCCCCCcEEEEcCCCCEEEEEEC
Confidence 11 112346789999998877766543
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.02 E-value=3.8e-05 Score=72.25 Aligned_cols=201 Identities=10% Similarity=0.032 Sum_probs=116.9
Q ss_pred ecCCEEEEec------------------CCCcEEEEeCCCcc--eeeecCCCCeeEEEEeCCCCEEEEEeCCC-------
Q 043707 131 ASGDLLYTGS------------------DSKNIRVWKNLKEF--SGFKSNSGLVKAIIITGDSNKIFTGHQDG------- 183 (347)
Q Consensus 131 ~~~~~l~tg~------------------~dg~I~vwd~~~~~--~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg------- 183 (347)
++++++++++ .++.+.+.|..... ..+.- .+.-..++++|+|+++++.+.+.
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V-gg~pd~~~~spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV-SGNLDNCDADYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe-CCCccceEECCCCCEEEEEecCcccCcchh
Confidence 6788888874 23467777765432 22221 12446788999999999888663
Q ss_pred --------cEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEee--cce-eeeeecCCCeeEEEEcCCCCEEEE
Q 043707 184 --------KIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRR--NRN-VLKIRHYDAVSCLSLNAEQGLLYS 252 (347)
Q Consensus 184 --------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~h~~~V~~l~~~~~~~~l~s 252 (347)
.|.+.|...... ..+....... +...+++... ... ...+.-.....++.++|||+++++
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~-------~v~~Gk~~~i---~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V 293 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEK-------AIAAGDYQEL---NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCV 293 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHH-------HHHHTCSEEE---TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEE
T ss_pred hccccccceEEEeeccceeE-------eccCCCeeEE---CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEE
Confidence 355555432211 0111111111 2233334433 112 223334456778999999998887
Q ss_pred EeC-CCcEEEEeCCCCE------------EEEEEecCCCcEEEEEeCCCCEEE-EEeCCCcEEEEEcccCCc---c-cee
Q 043707 253 GSW-DKTLKVWRISDCK------------CLESINAHDDAINSVVAGFDSLVF-TGSADGTVKVWRRELQGK---G-TKH 314 (347)
Q Consensus 253 ~s~-dg~i~vwdl~~~~------------~~~~~~~h~~~v~~i~~~~~~~l~-s~~~dg~I~vwd~~~~~~---~-~~~ 314 (347)
++. +.+|.++|+.+.+ .+..+.. ......++|+++|.++ +.--|++|.+||+....+ + ...
T Consensus 294 ~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~ 372 (595)
T 1fwx_A 294 AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVD 372 (595)
T ss_dssp ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCC
T ss_pred eCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccc
Confidence 764 7899999998653 3344432 3457889999999444 566799999999975210 0 011
Q ss_pred eehhhhhccCCc-----EEEEEEccCCCEEEEec
Q 043707 315 FLAQVLLKQENA-----ITALAVNQESAVVYCGS 343 (347)
Q Consensus 315 ~~~~~~~~h~~~-----V~~l~~~p~~~~l~sgs 343 (347)
..+..+..|-.+ -..+.++|||++|+++.
T Consensus 373 ~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 373 PIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp CEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred eeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 233444444322 12335689999999864
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.00 E-value=0.00035 Score=59.40 Aligned_cols=151 Identities=9% Similarity=-0.038 Sum_probs=100.3
Q ss_pred EEeecCCEE-EEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeeccc
Q 043707 128 SLAASGDLL-YTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSL 204 (347)
Q Consensus 128 ~l~~~~~~l-~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~ 204 (347)
.+.++++.| ++.-.++.|.++|.. +.+..+..-.. ....++++++.++.+..++.|.++|..+.+......+...
T Consensus 70 Gi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~ 147 (266)
T 2iwa_A 70 GLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYN 147 (266)
T ss_dssp EEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred EEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCC
Confidence 445556544 445567899999965 33444432211 2234566787777777889999999988765444433211
Q ss_pred ccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecC--------
Q 043707 205 PTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAH-------- 276 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h-------- 276 (347)
+ ..-..++.+.|. ++.+++..-.++.|.+.|..+++.+..+...
T Consensus 148 ~---------------------------~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~ 199 (266)
T 2iwa_A 148 G---------------------------HRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLID 199 (266)
T ss_dssp T---------------------------EECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHH
T ss_pred C---------------------------cccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCccccccc
Confidence 0 011235677777 6644444445789999999999999988642
Q ss_pred -----CCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccC
Q 043707 277 -----DDAINSVVAGFDS--LVFTGSADGTVKVWRRELQ 308 (347)
Q Consensus 277 -----~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~ 308 (347)
....+.|+++|++ +++++...+.|.+.++...
T Consensus 200 ~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 200 EGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 1356899999987 7778888999999998743
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.99 E-value=9.1e-05 Score=72.07 Aligned_cols=72 Identities=14% Similarity=0.107 Sum_probs=49.0
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCC-cEEEEEeCCCC--EEEEEeC---------------
Q 043707 235 YDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDD-AINSVVAGFDS--LVFTGSA--------------- 296 (347)
Q Consensus 235 ~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~-~v~~i~~~~~~--~l~s~~~--------------- 296 (347)
...+....+..++.+++.++.||.+++||+++++.+.++..... ...-+.+..+| ++++.+.
T Consensus 476 ~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~ 555 (677)
T 1kb0_A 476 VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQ 555 (677)
T ss_dssp SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCC
T ss_pred CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccC
Confidence 33444455666788999999999999999999999999975432 22334555666 4444222
Q ss_pred -CCcEEEEEcc
Q 043707 297 -DGTVKVWRRE 306 (347)
Q Consensus 297 -dg~I~vwd~~ 306 (347)
.+.+.+|.+.
T Consensus 556 ~~~~l~~f~l~ 566 (677)
T 1kb0_A 556 GPGTVYTFVVG 566 (677)
T ss_dssp CCCEEEEEEET
T ss_pred CCCeEEEEecc
Confidence 4677777775
No 244
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.91 E-value=0.0051 Score=51.83 Aligned_cols=200 Identities=11% Similarity=0.054 Sum_probs=117.5
Q ss_pred eeeeccccEEEEeec--CC-EEEEecCCCcEEEEeCCCc-ceeee-cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCC
Q 043707 118 SIVRKEGHIYSLAAS--GD-LLYTGSDSKNIRVWKNLKE-FSGFK-SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 118 ~l~~h~~~V~~l~~~--~~-~l~tg~~dg~I~vwd~~~~-~~~~~-~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
.+.+-.+.+..++++ ++ ++++...++.|...|.... .+.+. .-......|++.+++.++++.-.++.+.++++..
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 344444567777765 44 5555777888888886533 22221 1124688999999887767766778899998876
Q ss_pred CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC---CCEE
Q 043707 193 KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRIS---DCKC 269 (347)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~---~~~~ 269 (347)
...........++. ...........|+|+|.++.|+++.......||.++ ..+.
T Consensus 101 ~~~i~~~~~~~~~~-----------------------~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~ 157 (255)
T 3qqz_A 101 NSEVKILKKIKIPL-----------------------QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNE 157 (255)
T ss_dssp TCCEEEEEEEECCC-----------------------SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSC
T ss_pred CCeeeeeeeecccc-----------------------ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCc
Confidence 54311111000000 001245567899999998777777765555555553 1111
Q ss_pred EEEEe-------cCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCccceeeehhhhhc---cCCcEEEEEEccCCC
Q 043707 270 LESIN-------AHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLK---QENAITALAVNQESA 337 (347)
Q Consensus 270 ~~~~~-------~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~---h~~~V~~l~~~p~~~ 337 (347)
+..+. .+...+..++++|.. +++.....+.|.++|.... ......+..-..+ --.....|+|.++|+
T Consensus 158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred eeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 22221 123356889999875 6667778889999997622 1111111111111 123678999999998
Q ss_pred EEEE
Q 043707 338 VVYC 341 (347)
Q Consensus 338 ~l~s 341 (347)
+.++
T Consensus 237 lyIv 240 (255)
T 3qqz_A 237 IYIV 240 (255)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5555
No 245
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.83 E-value=0.0048 Score=61.05 Aligned_cols=192 Identities=11% Similarity=0.208 Sum_probs=117.8
Q ss_pred ccEEEEeecC-CEEEEecCCCcEEEEeCCCc-ceeeec-------CCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCC
Q 043707 124 GHIYSLAASG-DLLYTGSDSKNIRVWKNLKE-FSGFKS-------NSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKN 194 (347)
Q Consensus 124 ~~V~~l~~~~-~~l~tg~~dg~I~vwd~~~~-~~~~~~-------h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~ 194 (347)
..|.++..+. ..|..|+.++-|..|+.... +..+.. ....|.++...++|+ |..|..++-|..||..++.
T Consensus 310 ~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~ 388 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQR 388 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCC
T ss_pred CcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCc
Confidence 3577877653 35666777777888874322 222211 234699999888874 5567777778889887654
Q ss_pred CceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEe
Q 043707 195 PSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESIN 274 (347)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~ 274 (347)
..........+ . ..-....|.++...+++.+|..|+.++.|.+||..+++...-..
T Consensus 389 ~~~~~~~~~~~-----------------------~-~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~ 444 (795)
T 4a2l_A 389 FTSYTLQEDES-----------------------A-RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQ 444 (795)
T ss_dssp EEEECCC------------------------------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECT
T ss_pred EEEEecCCCCc-----------------------c-cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeec
Confidence 21111000000 0 00023568899988888867778887889999988776433221
Q ss_pred ----cCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhh----hccCCcEEEEEEccCCCEEEEecCCC
Q 043707 275 ----AHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVL----LKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 275 ----~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~----~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
.....|.++...+++.|..|+. +-|.+||.....- ...... ......|.++...++|.+.+.+. +|
T Consensus 445 ~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G 518 (795)
T 4a2l_A 445 RNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSF----TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG 518 (795)
T ss_dssp TTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEE----EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC
T ss_pred CCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeE----EEccccccccccCCceEEEEEECCCCCEEEEeC-Cc
Confidence 2345789999888886666666 4588888764321 111110 11235799999999888766554 44
No 246
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.78 E-value=0.00057 Score=67.32 Aligned_cols=150 Identities=15% Similarity=0.049 Sum_probs=82.9
Q ss_pred EEEe-ecCCEEEEe-cCCC----cEEEEeCCCc-ceeeecC-CCCeeEEEEeCCCCEEEEEeCCC-----cEEEEecCCC
Q 043707 127 YSLA-ASGDLLYTG-SDSK----NIRVWKNLKE-FSGFKSN-SGLVKAIIITGDSNKIFTGHQDG-----KIRIWKVSRK 193 (347)
Q Consensus 127 ~~l~-~~~~~l~tg-~~dg----~I~vwd~~~~-~~~~~~h-~~~V~~l~~sp~~~~l~s~~~Dg-----~I~vwd~~~~ 193 (347)
.+++ ++|++|+-+ +.+| .|+++|+... .. +..+ ......++|+||++.|+....|. .|.++++.++
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKL 257 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSC
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCC
Confidence 3566 778876644 2222 5999996543 21 1111 11234688999998888777652 4667777654
Q ss_pred CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC---CCcEEEEeCCCC--E
Q 043707 194 NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW---DKTLKVWRISDC--K 268 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~---dg~i~vwdl~~~--~ 268 (347)
......... .........+.|+||+++|+..+. ...|.++|+.++ +
T Consensus 258 ~~~~~lv~~-----------------------------~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~ 308 (751)
T 2xe4_A 258 QSEDVCLYE-----------------------------EHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAH 308 (751)
T ss_dssp GGGCEEEEE-----------------------------CCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTC
T ss_pred chhcEEEEe-----------------------------cCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCC
Confidence 311000000 012234567889999998877653 345888898765 2
Q ss_pred E-EEEE-ecCCCcEEEEEeCCCCE-EEEEeCC--C--cEEEEEcc
Q 043707 269 C-LESI-NAHDDAINSVVAGFDSL-VFTGSAD--G--TVKVWRRE 306 (347)
Q Consensus 269 ~-~~~~-~~h~~~v~~i~~~~~~~-l~s~~~d--g--~I~vwd~~ 306 (347)
. +..+ .........+.|+.++. ++....+ + .|..+++.
T Consensus 309 ~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~ 353 (751)
T 2xe4_A 309 NTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRG 353 (751)
T ss_dssp CCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETT
T ss_pred ceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCC
Confidence 2 1333 33345556666555554 4444443 3 55555554
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.77 E-value=0.00026 Score=69.03 Aligned_cols=54 Identities=19% Similarity=0.159 Sum_probs=39.6
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcE-EEEEeCCCC--EEEEE
Q 043707 241 LSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAI-NSVVAGFDS--LVFTG 294 (347)
Q Consensus 241 l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v-~~i~~~~~~--~l~s~ 294 (347)
-.+...+.+++.++.||.++.||.++++.+.+++.....+ .-+.|..+| ++++.
T Consensus 480 g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 480 GTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred ccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 3455578899999999999999999999999887553322 335566677 55543
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.75 E-value=0.014 Score=49.19 Aligned_cols=150 Identities=13% Similarity=0.095 Sum_probs=91.8
Q ss_pred cEEEEeec--CC-EEEEecCCCcEEEEeCCCc-ceeee-cCCCCeeEEEEeCCCCEEEEE-eCCCcEEEEecCCCCCcee
Q 043707 125 HIYSLAAS--GD-LLYTGSDSKNIRVWKNLKE-FSGFK-SNSGLVKAIIITGDSNKIFTG-HQDGKIRIWKVSRKNPSVH 198 (347)
Q Consensus 125 ~V~~l~~~--~~-~l~tg~~dg~I~vwd~~~~-~~~~~-~h~~~V~~l~~sp~~~~l~s~-~~Dg~I~vwd~~~~~~~~~ 198 (347)
....+.++ ++ ++++-..++.|.+++.... ...+. ........+++.+++..|+.+ ...+.|.+++++.......
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 34455553 44 5555566789999986533 22222 222468899999965555544 5567899998865421110
Q ss_pred eeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC---CcEEEEeCCCCEEEEEEe-
Q 043707 199 KRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD---KTLKVWRISDCKCLESIN- 274 (347)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d---g~i~vwdl~~~~~~~~~~- 274 (347)
.. ........++++|++..|+.+... +.|..+++.. +....+.
T Consensus 117 --~~------------------------------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~ 163 (267)
T 1npe_A 117 --FD------------------------------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQ 163 (267)
T ss_dssp --EC------------------------------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEEC
T ss_pred --EE------------------------------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEE
Confidence 00 012346789999976666666543 6788888753 3233332
Q ss_pred cCCCcEEEEEeCCCC-EE-EEEeCCCcEEEEEccc
Q 043707 275 AHDDAINSVVAGFDS-LV-FTGSADGTVKVWRREL 307 (347)
Q Consensus 275 ~h~~~v~~i~~~~~~-~l-~s~~~dg~I~vwd~~~ 307 (347)
..-.....+++++++ .| ++-...+.|.++|...
T Consensus 164 ~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 164 DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 233457889999864 44 4555678999999863
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.74 E-value=0.0015 Score=61.40 Aligned_cols=201 Identities=11% Similarity=0.012 Sum_probs=108.5
Q ss_pred cCCEEEEec-CCCcEEEEeCCC--cceeeec-CCCCeeEEEE-e-CCCCEEEEEe------------------CCCcEEE
Q 043707 132 SGDLLYTGS-DSKNIRVWKNLK--EFSGFKS-NSGLVKAIII-T-GDSNKIFTGH------------------QDGKIRI 187 (347)
Q Consensus 132 ~~~~l~tg~-~dg~I~vwd~~~--~~~~~~~-h~~~V~~l~~-s-p~~~~l~s~~------------------~Dg~I~v 187 (347)
+|++|+... .++.|.+.|+.. ..+.+.- ....+..+++ . |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 677666654 456799998654 2332222 2345888898 5 9999998885 3457888
Q ss_pred EecCCCCCceeeeecccccccceEEeccCCCeEEEEeecc-eeeee---ecC--CCeeEE------EEcCCCCEEEEEeC
Q 043707 188 WKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNR-NVLKI---RHY--DAVSCL------SLNAEQGLLYSGSW 255 (347)
Q Consensus 188 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~h~--~~V~~l------~~~~~~~~l~s~s~ 255 (347)
.|..+.+......++..| +.+....++...+...... ....+ ... +.|..+ .+.++|+.+..
T Consensus 180 ID~~t~~v~~qI~Vgg~p---d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i--- 253 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNL---DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL--- 253 (595)
T ss_dssp EETTTTEEEEEEEESSCC---CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE---
T ss_pred EECCCCeEEEEEEeCCCc---cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE---
Confidence 888877655554443322 2222222222222221111 00000 000 001111 11223433332
Q ss_pred CCcEEEEeCCC--CEE-EEEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcccCCcc------ceeeehhhhhccC
Q 043707 256 DKTLKVWRISD--CKC-LESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRELQGKG------TKHFLAQVLLKQE 324 (347)
Q Consensus 256 dg~i~vwdl~~--~~~-~~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~~~~~~------~~~~~~~~~~~h~ 324 (347)
+.+.|.|.++ ++. +..+.... ...++.++||| .++++..+.+|.++|+...... ......... .-.
T Consensus 254 -~~V~VID~~~~~~~~~~~~Ipvg~-~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG 330 (595)
T 1fwx_A 254 -NGVKVVDGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELG 330 (595)
T ss_dssp -TTEEEEECSGGGCCSSEEEEEEES-SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCC
T ss_pred -CcEEEEeCcccCCceeEEEEecCC-CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCC
Confidence 4589999987 555 55555332 45678999999 5556668999999999843210 000011111 123
Q ss_pred CcEEEEEEccCCCEEEEe
Q 043707 325 NAITALAVNQESAVVYCG 342 (347)
Q Consensus 325 ~~V~~l~~~p~~~~l~sg 342 (347)
.....++|+|+| .+++.
T Consensus 331 ~gP~h~aF~~dG-~aY~t 347 (595)
T 1fwx_A 331 LGPLHTAFDGRG-NAYTS 347 (595)
T ss_dssp SCEEEEEECTTS-EEEEE
T ss_pred CCcceEEECCCC-eEEEE
Confidence 468899999999 65553
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.70 E-value=0.014 Score=57.73 Aligned_cols=187 Identities=10% Similarity=0.149 Sum_probs=116.6
Q ss_pred ccEEEEeecC-CEEEEecCCCcEEEEeCCCc-ceeeec---------CCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCC
Q 043707 124 GHIYSLAASG-DLLYTGSDSKNIRVWKNLKE-FSGFKS---------NSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 124 ~~V~~l~~~~-~~l~tg~~dg~I~vwd~~~~-~~~~~~---------h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
..|.++..+. ..|..|+.++-|..|+.... +..+.. ....|.+++..++++.|..|..++-|.+||..+
T Consensus 357 ~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS 436 (795)
T ss_dssp SSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred CeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC
Confidence 3588888753 35667887777999986532 322221 235799999998887577788777799999877
Q ss_pred CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Q 043707 193 KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLES 272 (347)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~ 272 (347)
++....... .+. .....|.++...+++.+.+. +. +.+.+||..+++....
T Consensus 437 ~~~~~~~~~--~~~--------------------------l~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~ 486 (795)
T 4a2l_A 437 GQVENFNQR--NSQ--------------------------LVNENVYAILPDGEGNLWLG-TL-SALVRFNPEQRSFTTI 486 (795)
T ss_dssp CCEEEECTT--TSC--------------------------CSCSCEEEEEECSSSCEEEE-ES-SCEEEEETTTTEEEEC
T ss_pred CcEEEeecC--CCC--------------------------cCCCeeEEEEECCCCCEEEE-ec-CceeEEeCCCCeEEEc
Confidence 642211100 000 13457889988887775554 44 4589999887754332
Q ss_pred Eec------CCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeeh-hhhhccCCcEEEEEEccCCCEEEEec
Q 043707 273 INA------HDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLA-QVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 273 ~~~------h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~-~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
... ....|.++...+++.|..|+. +-|..||...... ..... .........|.+|...++|.+.+++.
T Consensus 487 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 487 EKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp CBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred cccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence 211 235789999888886666666 5688888763321 00000 00112345799999999988666544
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.61 E-value=0.0024 Score=53.81 Aligned_cols=135 Identities=10% Similarity=0.095 Sum_probs=84.2
Q ss_pred EeecCCEEEEe-cCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccc
Q 043707 129 LAASGDLLYTG-SDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLP 205 (347)
Q Consensus 129 l~~~~~~l~tg-~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~ 205 (347)
+.+.++.|+.. -.++.+.+||.. +.+..+..-. ....+++++..|+.+..++.|.++|..+.+......+....
T Consensus 92 it~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 92 ISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp EEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT
T ss_pred EEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC
Confidence 45555544444 457899999954 4455554322 22334456777777776888999999887654443332100
Q ss_pred cccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCEEEEEEecC--------
Q 043707 206 TFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS-WDKTLKVWRISDCKCLESINAH-------- 276 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s-~dg~i~vwdl~~~~~~~~~~~h-------- 276 (347)
.--..++.+.|. +|. |+... .+..|.+.|.++++.+..+...
T Consensus 169 ---------------------------~~~~~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~ 219 (262)
T 3nol_A 169 ---------------------------EELPELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGP 219 (262)
T ss_dssp ---------------------------EECCCEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCS
T ss_pred ---------------------------ccccccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCcccccc
Confidence 011334556776 564 55555 5789999999999999888642
Q ss_pred ----CCcEEEEEeCCCC-EEEEEe
Q 043707 277 ----DDAINSVVAGFDS-LVFTGS 295 (347)
Q Consensus 277 ----~~~v~~i~~~~~~-~l~s~~ 295 (347)
....+.|+++|++ .|+..+
T Consensus 220 ~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 220 LPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccCcCCceEEEEEcCCCCEEEEEC
Confidence 1356899999976 444443
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.61 E-value=0.025 Score=50.02 Aligned_cols=163 Identities=9% Similarity=0.033 Sum_probs=95.7
Q ss_pred CcEEEEeCCCc-ceeeecCCCCeeEEEEeCCCCEEE-EEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeE
Q 043707 143 KNIRVWKNLKE-FSGFKSNSGLVKAIIITGDSNKIF-TGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNY 220 (347)
Q Consensus 143 g~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~~~~l~-s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
..|+..+.... ...+......+..++|.+....|+ +-...+.|+.+++..........
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-------------------- 112 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-------------------- 112 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------------------
T ss_pred cceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe--------------------
Confidence 45777775432 223323334588999998555555 44467888888887654211110
Q ss_pred EEEeecceeeeeecCCCeeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEE-EEeCC
Q 043707 221 VEVRRNRNVLKIRHYDAVSCLSLNAEQGLL-YSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVF-TGSAD 297 (347)
Q Consensus 221 ~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~-s~~~d 297 (347)
........+++.+.+..| ++-...+.|.+.++........+...-.....|++.|. +.|+ +-...
T Consensus 113 ------------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~ 180 (349)
T 3v64_C 113 ------------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN 180 (349)
T ss_dssp ------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS
T ss_pred ------------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC
Confidence 012345678888755544 45555788999998654332223333456789999985 5444 44444
Q ss_pred -CcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 298 -GTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 298 -g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
+.|..+++..... .............|+++|++..|+.+.
T Consensus 181 ~~~I~r~~~dG~~~------~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 181 TPRIEASSMDGSGR------RIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp SCEEEEEETTSCSC------EESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCCc------EEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 7788887753211 111112234678999998777776654
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.60 E-value=0.0026 Score=61.69 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=40.3
Q ss_pred CCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCc
Q 043707 255 WDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 255 ~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~ 310 (347)
.+|.|..||+.+++.+-+++.+...........+++++.++.|+.|++||.++++.
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEA 491 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChh
Confidence 35889999999999987776443222111222456899999999999999986653
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.52 E-value=0.0032 Score=53.07 Aligned_cols=134 Identities=12% Similarity=0.099 Sum_probs=86.9
Q ss_pred EeecCC-EEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccc
Q 043707 129 LAASGD-LLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLP 205 (347)
Q Consensus 129 l~~~~~-~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~ 205 (347)
+.+.++ +.+....++.+.+||.. +.+..+..- ..-+.++ ++++.|+.+..++.|.++|..+.+......+...+
T Consensus 101 it~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g 177 (268)
T 3nok_A 101 LASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRG 177 (268)
T ss_dssp EEECSSCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred EEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCC
Confidence 555555 44445568899999954 444555432 2223444 46678887777899999999887654444332111
Q ss_pred cccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCEEEEEEecC--------
Q 043707 206 TFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS-WDKTLKVWRISDCKCLESINAH-------- 276 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s-~dg~i~vwdl~~~~~~~~~~~h-------- 276 (347)
. .-..++.+.|. +|. |+... .+..|.+.|.++++.+..+...
T Consensus 178 ~---------------------------~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~ 228 (268)
T 3nok_A 178 Q---------------------------PVELINELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAG 228 (268)
T ss_dssp E---------------------------ECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTT
T ss_pred c---------------------------ccccccccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccc
Confidence 0 12245667776 564 55555 4789999999999999888632
Q ss_pred -----CCcEEEEEeCCCC--EEEEE
Q 043707 277 -----DDAINSVVAGFDS--LVFTG 294 (347)
Q Consensus 277 -----~~~v~~i~~~~~~--~l~s~ 294 (347)
.+-.+.|++.|++ +++||
T Consensus 229 ~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 229 QVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred cccCcCCceEEEEEcCCCCEEEEeC
Confidence 1357899999975 55555
No 255
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.52 E-value=0.018 Score=51.85 Aligned_cols=105 Identities=16% Similarity=0.128 Sum_probs=73.2
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE------------EEEEEec------CCCcEEEEEeCCCC----EEEEE
Q 043707 237 AVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK------------CLESINA------HDDAINSVVAGFDS----LVFTG 294 (347)
Q Consensus 237 ~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~------------~~~~~~~------h~~~v~~i~~~~~~----~l~s~ 294 (347)
.|..+..+|+|.+|+..+ +.+|.|-.+..+. ..+.+.- ...+|..+.|||-+ .|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 577899999999999987 5689999887321 1233432 24679999999964 89999
Q ss_pred eCCCcEEEEEcccCCccceeeehhh-----hhccCCcEEEEEEccCCCEEEEec
Q 043707 295 SADGTVKVWRRELQGKGTKHFLAQV-----LLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 295 ~~dg~I~vwd~~~~~~~~~~~~~~~-----~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
..|+.|++||+........ .+-.. .......|.+++|..++-.|+..+
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~ 198 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLN 198 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEe
Confidence 9999999999985322111 11111 112236799999999887666643
No 256
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.50 E-value=0.00028 Score=63.15 Aligned_cols=130 Identities=8% Similarity=-0.058 Sum_probs=82.3
Q ss_pred cEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEe----------CCCcEEEEecCCCCCceeeeecccccccceE
Q 043707 144 NIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGH----------QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYV 211 (347)
Q Consensus 144 ~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~----------~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~ 211 (347)
+|.++|.. +.+..+..-..+ .++++|++++++.+. .++.|.+||..+.+......++.-+.+
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~---- 120 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF---- 120 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSC----
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcccc----
Confidence 78888854 345555544445 799999999998886 378999999999876544433200000
Q ss_pred EeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC--CCcEEE--EeCCCCEEEEEEecCCCcEEEEEeCC
Q 043707 212 KSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW--DKTLKV--WRISDCKCLESINAHDDAINSVVAGF 287 (347)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~--dg~i~v--wdl~~~~~~~~~~~h~~~v~~i~~~~ 287 (347)
........++++||+++|+++.. +..+.+ +|+.+ +..+..... +...|
T Consensus 121 ---------------------~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~----~~~~p 172 (368)
T 1mda_H 121 ---------------------SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC----FHIHP 172 (368)
T ss_dssp ---------------------CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC----CCCEE
T ss_pred ---------------------ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc----eEEcc
Confidence 00123456899999999999875 456888 99877 455542111 11223
Q ss_pred CC--EEEEEeCCCcEEEEEccc
Q 043707 288 DS--LVFTGSADGTVKVWRREL 307 (347)
Q Consensus 288 ~~--~l~s~~~dg~I~vwd~~~ 307 (347)
++ .+++.+.||.+.+.|+..
T Consensus 173 ~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 173 GAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp EETTEEECCCCTTSCEEEECCS
T ss_pred CCCeEEEEEcCCCCEEEEECcc
Confidence 32 445556677776666654
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.0099 Score=54.32 Aligned_cols=143 Identities=8% Similarity=-0.010 Sum_probs=85.8
Q ss_pred CCEEEEecCCCcEEEEeCCC-cceeeecCCCCeeEEEEeCCCCEEEEEeCC-C---cEEEEecCCCCCceeeeecccccc
Q 043707 133 GDLLYTGSDSKNIRVWKNLK-EFSGFKSNSGLVKAIIITGDSNKIFTGHQD-G---KIRIWKVSRKNPSVHKRVGSLPTF 207 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~~-~~~~~~~h~~~V~~l~~sp~~~~l~s~~~D-g---~I~vwd~~~~~~~~~~~~~~~~~~ 207 (347)
+..|+.+...+.|+.+|... .+..+.........|+|++++++|+.+... + ...+|-...+.......+
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l------ 222 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITEL------ 222 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEE------
T ss_pred CCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeee------
Confidence 34555555447888888654 344444445568899999999866666542 2 122222222221100000
Q ss_pred cceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEec-CCCcEEEEEe
Q 043707 208 KDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA-EQGLLYSGSWDKTLKVWRISDCKCLESINA-HDDAINSVVA 285 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~-h~~~v~~i~~ 285 (347)
........++++| ++.++++-..++.|..++...+.....+.. .......|++
T Consensus 223 -------------------------~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~ 277 (430)
T 3tc9_A 223 -------------------------TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQF 277 (430)
T ss_dssp -------------------------EECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEE
T ss_pred -------------------------ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEE
Confidence 0123356788999 666666666678999999987764332322 2234678999
Q ss_pred CCCC-EEE-EEeCCCcEEEEEcc
Q 043707 286 GFDS-LVF-TGSADGTVKVWRRE 306 (347)
Q Consensus 286 ~~~~-~l~-s~~~dg~I~vwd~~ 306 (347)
+|++ +|+ +-...+.|..++..
T Consensus 278 ~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 278 HPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCEEEEEECCCCEEEEEeCC
Confidence 9998 344 45567899998865
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.45 E-value=0.023 Score=51.08 Aligned_cols=170 Identities=9% Similarity=0.048 Sum_probs=97.3
Q ss_pred EEEEecCCCcEEEEeCCC-cceeeecCCCCeeEEEEeCCCCEEE-EEeCCCcEEEEecCCCCCceeeeecccccccceEE
Q 043707 135 LLYTGSDSKNIRVWKNLK-EFSGFKSNSGLVKAIIITGDSNKIF-TGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVK 212 (347)
Q Consensus 135 ~l~tg~~dg~I~vwd~~~-~~~~~~~h~~~V~~l~~sp~~~~l~-s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~ 212 (347)
+|+.+. ...|+..+... ....+......+..++|.+.+..|+ +-...+.|+.+++..........
T Consensus 89 ~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~------------ 155 (386)
T 3v65_B 89 VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS------------ 155 (386)
T ss_dssp EEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC------------
T ss_pred eeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe------------
Confidence 343333 35688887543 2333333345688999998555554 44567788888887653211100
Q ss_pred eccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CE
Q 043707 213 SSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLL-YSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SL 290 (347)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~ 290 (347)
........+++.+.+..| ++-...+.|.+.++........+...-.....|++.|. +.
T Consensus 156 --------------------~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ 215 (386)
T 3v65_B 156 --------------------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 215 (386)
T ss_dssp --------------------SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred --------------------CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCe
Confidence 012234568888755544 44455678888888644333333333356788999875 44
Q ss_pred EEEEe-CC-CcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 291 VFTGS-AD-GTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 291 l~s~~-~d-g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
|+... .. +.|..+++..... . ............|+|+|++..|+.+.
T Consensus 216 ly~td~~~~~~I~r~~~dG~~~--~----~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 216 IYWTDWGNTPRIEASSMDGSGR--R----IIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp EEEEECSSSCEEEEEETTSCSC--E----EEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred EEEeccCCCCEEEEEeCCCCCc--E----EEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 44443 44 6788777753211 1 11112234578999998777766653
No 259
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.41 E-value=0.04 Score=48.18 Aligned_cols=184 Identities=7% Similarity=0.056 Sum_probs=97.4
Q ss_pred ccEEEEee--cCCEEEEecCCCcEEE-EeCCCcceee-ecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee
Q 043707 124 GHIYSLAA--SGDLLYTGSDSKNIRV-WKNLKEFSGF-KSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 124 ~~V~~l~~--~~~~l~tg~~dg~I~v-wd~~~~~~~~-~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~ 199 (347)
+.++.+.+ ++.+++.+ .+|.|+. .|-.+..... ......+..+++.+++.+++.+...+..+-+|-. +..-...
T Consensus 122 ~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~ 199 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPH 199 (327)
T ss_dssp SCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEE
T ss_pred CCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeEC
Confidence 34556654 34445444 4565533 3434333322 2345678899999988777666443333333321 1110000
Q ss_pred eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEec----
Q 043707 200 RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINA---- 275 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~---- 275 (347)
. ......+..+.+.+++.+++ .+.+|.+++.+...++....+..
T Consensus 200 ~-------------------------------~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~ 247 (327)
T 2xbg_A 200 N-------------------------------RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRR 247 (327)
T ss_dssp E-------------------------------CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSS
T ss_pred C-------------------------------CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCccc
Confidence 0 01345677888888877654 45578887775333444433321
Q ss_pred CCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 276 HDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 276 h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
+...+..+.+.+++.+++++.++.|. +..+ .++ ..............+.+|.|.+++. +++++.+|
T Consensus 248 ~~~~~~~v~~~~~~~~~~~g~~g~i~-~S~D-gG~--tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G 313 (327)
T 2xbg_A 248 NSVGFLDLAYRTPNEVWLAGGAGALL-CSQD-GGQ--TWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKG 313 (327)
T ss_dssp CCSCEEEEEESSSSCEEEEESTTCEE-EESS-TTS--SCEECGGGTTSSSCCCEEEEEETTE-EEEECSTT
T ss_pred CCcceEEEEecCCCEEEEEeCCCeEE-EeCC-CCc--ccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCc
Confidence 22358889998877555566677763 3332 232 2222222222335678888875554 55556666
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.39 E-value=0.011 Score=49.20 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=84.0
Q ss_pred EeecCC-EEEEecCCCcEEEEeCC--CcceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccc
Q 043707 129 LAASGD-LLYTGSDSKNIRVWKNL--KEFSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLP 205 (347)
Q Consensus 129 l~~~~~-~l~tg~~dg~I~vwd~~--~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~ 205 (347)
+...++ +......++.+.+||.. +.+..+..- ..=+.++ +++..|+.+..+++|.++|..+.+......+...+
T Consensus 70 i~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 70 IVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp EEEETTEEEEEESSSSEEEEEETTTTEEEEEEECS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred EEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCC
Confidence 444444 44445668899999954 444555432 2223444 56667777777899999999887654444332110
Q ss_pred cccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCEEEEEEecC--------
Q 043707 206 TFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGS-WDKTLKVWRISDCKCLESINAH-------- 276 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s-~dg~i~vwdl~~~~~~~~~~~h-------- 276 (347)
. --..++.+.|. ++. |+... .+..|.+.|.++++.+..+...
T Consensus 147 ~---------------------------~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~ 197 (243)
T 3mbr_X 147 R---------------------------PLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADA 197 (243)
T ss_dssp E---------------------------ECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTS
T ss_pred c---------------------------ccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCcccccc
Confidence 0 11234556665 454 44554 4789999999999999888622
Q ss_pred -----CCcEEEEEeCCCC--EEEEE
Q 043707 277 -----DDAINSVVAGFDS--LVFTG 294 (347)
Q Consensus 277 -----~~~v~~i~~~~~~--~l~s~ 294 (347)
.+-.+.|++.|++ +++||
T Consensus 198 ~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 198 LTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp CCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccCCcCCceEEEEEcCCCCEEEEEC
Confidence 1356899999975 55555
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.39 E-value=0.019 Score=56.64 Aligned_cols=184 Identities=16% Similarity=0.205 Sum_probs=111.6
Q ss_pred ccEEEEeecC-CEEEEecCCCcEEEEeCCCc-ceee----ecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCce
Q 043707 124 GHIYSLAASG-DLLYTGSDSKNIRVWKNLKE-FSGF----KSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSV 197 (347)
Q Consensus 124 ~~V~~l~~~~-~~l~tg~~dg~I~vwd~~~~-~~~~----~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~ 197 (347)
..|.++..+. ..|..|+.++-|..|+.... ...+ ......|.++...+++. |..|..++-|..+|..+++...
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQI 441 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEE
T ss_pred cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEE
Confidence 4588888764 35666776666888886532 2111 12235789998887775 4557766678888876653211
Q ss_pred eeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecC-
Q 043707 198 HKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAH- 276 (347)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h- 276 (347)
.... . .....|.++...+++. |..|+. +.|.+||..+++........
T Consensus 442 ~~~~-~-----------------------------~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~ 489 (781)
T 3v9f_A 442 IELE-K-----------------------------NELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSN 489 (781)
T ss_dssp CCST-T-----------------------------TCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTT
T ss_pred eccC-C-----------------------------CCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcc
Confidence 1000 0 1345688888887765 455555 56899998776543322222
Q ss_pred ----CCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 277 ----DDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 277 ----~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
...|.++...+++.|..|+.++-|..||...... .... ..-.-....|.++...++|.+.+++.
T Consensus 490 ~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~--~~~~-~~~~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 490 SQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV--RKFN-QYEGFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp SSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE--EEEC-TTTTCSCSCEEEEEECTTSCEEEEET
T ss_pred cccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE--EEcc-CCCCCCCCeeEEEEECCCCCEEEEEC
Confidence 3578999988888777777755577788753211 1111 00011245789999998888766543
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.38 E-value=0.012 Score=55.98 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=38.7
Q ss_pred CCcEEEEeCCCCEEEEEEecCCCcEEEE-EeCCCCEEEEEeCCCcEEEEEcccCCc
Q 043707 256 DKTLKVWRISDCKCLESINAHDDAINSV-VAGFDSLVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 256 dg~i~vwdl~~~~~~~~~~~h~~~v~~i-~~~~~~~l~s~~~dg~I~vwd~~~~~~ 310 (347)
+|.|..||+.+++.+-+++.... +... ....+++++.++.|+.|+.||.++++.
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKFA-AWGGTLYTKGGLVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSC-CCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CCeEEEEECCCCCEEEEecCCCC-ccceeEEECCCEEEEEcCCCeEEEEECCCCCE
Confidence 57899999999998877763322 2211 122356888899999999999987653
No 263
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.38 E-value=0.0012 Score=65.10 Aligned_cols=111 Identities=8% Similarity=0.030 Sum_probs=69.9
Q ss_pred CeeEEEEe-CCCCEEEEEeC-CC----cEEEEecCCC-CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecC
Q 043707 163 LVKAIIIT-GDSNKIFTGHQ-DG----KIRIWKVSRK-NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHY 235 (347)
Q Consensus 163 ~V~~l~~s-p~~~~l~s~~~-Dg----~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 235 (347)
.+...+|+ |||++|+-+.. +| +|+++|+.++ +.... .+ .
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~---------------------------------~ 220 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KV---------------------------------S 220 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CE---------------------------------E
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cc---------------------------------c
Confidence 67889999 99998775442 33 4999999887 52110 00 0
Q ss_pred CCeeEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCEE--EEEEe-cCCCcEEEEEeCCCC-EEE-EEe--CCCcEEEE
Q 043707 236 DAVSCLSLNAEQGLLYSGSWD-----KTLKVWRISDCKC--LESIN-AHDDAINSVVAGFDS-LVF-TGS--ADGTVKVW 303 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~d-----g~i~vwdl~~~~~--~~~~~-~h~~~v~~i~~~~~~-~l~-s~~--~dg~I~vw 303 (347)
.....++|+||++.|+....| ..|+++++.+++. ...+. ........+.|+||+ +|+ +.. ....|.++
T Consensus 221 ~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~ 300 (751)
T 2xe4_A 221 GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLL 300 (751)
T ss_dssp EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEE
Confidence 012457899999877766654 2588888877531 22232 223456678999998 444 332 24567777
Q ss_pred Eccc
Q 043707 304 RREL 307 (347)
Q Consensus 304 d~~~ 307 (347)
|+..
T Consensus 301 d~~~ 304 (751)
T 2xe4_A 301 DLRK 304 (751)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 8764
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.37 E-value=0.028 Score=55.44 Aligned_cols=189 Identities=14% Similarity=0.172 Sum_probs=113.7
Q ss_pred ccEEEEeecC-CEEEEecCCCcEEEEeCCCc-ceeee----------cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecC
Q 043707 124 GHIYSLAASG-DLLYTGSDSKNIRVWKNLKE-FSGFK----------SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 124 ~~V~~l~~~~-~~l~tg~~dg~I~vwd~~~~-~~~~~----------~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~ 191 (347)
..|.++..+. ..|-.|+.++-|..++.... +..+. .....|.++...+++. |..|..++-|.+||..
T Consensus 313 ~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~ 391 (781)
T 3v9f_A 313 ASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENG 391 (781)
T ss_dssp SCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETT
T ss_pred CeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECC
Confidence 3578877653 35666776677888875432 22221 1235689999888774 5566666668888876
Q ss_pred CCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEE
Q 043707 192 RKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLE 271 (347)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~ 271 (347)
++....... +. ......|.++...+++.+ ..|+.++.|..+|.++++..
T Consensus 392 ~~~~~~~~~----~~-------------------------~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~- 440 (781)
T 3v9f_A 392 KRVAIYNKE----NR-------------------------ELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQ- 440 (781)
T ss_dssp EEEEECC----------------------------------CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEE-
T ss_pred CCeEEEccC----CC-------------------------CCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEE-
Confidence 432110000 00 013466888888877764 45777777999998776543
Q ss_pred EEe---cCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 272 SIN---AHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 272 ~~~---~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
.+. .....|.++...+++.|..|+. +-|..||....... ..............|.++...++|.+.+.+..+|
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G 516 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVI-HHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG 516 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCC-EEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC
T ss_pred EeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEE-ecccCcccccccceeEEEEEcCCCCEEEEEcCCC
Confidence 332 1346789998888887777777 56888887643210 0000000011145799999999888766554344
No 265
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.33 E-value=0.051 Score=47.49 Aligned_cols=182 Identities=10% Similarity=0.071 Sum_probs=98.3
Q ss_pred ccEEEEeecCCEEEEecCCCcEEEEeC-CCcceeee---cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee
Q 043707 124 GHIYSLAASGDLLYTGSDSKNIRVWKN-LKEFSGFK---SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 124 ~~V~~l~~~~~~l~tg~~dg~I~vwd~-~~~~~~~~---~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~ 199 (347)
..+.++.++++.++.++..+.|+.-+. .+...... .+.+.+..|.+.+++..++.+ .+|.| |....+-..-..
T Consensus 80 ~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~tW~~ 156 (327)
T 2xbg_A 80 YRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAI--YRTKDSGKNWQA 156 (327)
T ss_dssp CEEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCE--EEESSTTSSEEE
T ss_pred ccEEEEEecCCeEEEEECCCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccE--EEEcCCCCCCEE
Confidence 356777766555555566676655432 22222221 233457788877666555544 45543 222221111111
Q ss_pred eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeC--CCCEEEEEEecCC
Q 043707 200 RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRI--SDCKCLESINAHD 277 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl--~~~~~~~~~~~h~ 277 (347)
.. ......+..+.+.+++.+++.+...+..+-+|- .+.+.+. ....
T Consensus 157 ~~------------------------------~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~ 204 (327)
T 2xbg_A 157 LV------------------------------QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTS 204 (327)
T ss_dssp EE------------------------------CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE--CCSS
T ss_pred ee------------------------------cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC--CCCC
Confidence 00 013446788899998888777654433334442 3444442 2345
Q ss_pred CcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhh-hccCCcEEEEEEccCCCEEEEec
Q 043707 278 DAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVL-LKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 278 ~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~-~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
..+..+.+.+++.++.++.+|.+++++.. .++ .......- ..+...+.++++.+++..++++.
T Consensus 205 ~~~~~~~~~~~g~~~~~~~~G~~~~s~~D-~G~--tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 205 RRLHNMGFTPDGRLWMIVNGGKIAFSDPD-NSE--NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEETT-EEE--EECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred CccceeEECCCCCEEEEeCCceEEEecCC-CCC--eeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 67888999888866677788888776422 111 11111111 11234688999998888777665
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.31 E-value=0.0096 Score=56.68 Aligned_cols=55 Identities=24% Similarity=0.245 Sum_probs=39.2
Q ss_pred CCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCc
Q 043707 256 DKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 256 dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~ 310 (347)
+|.|..||+.+++.+-+.+.............+++++.++.|+.|+.||.++++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~ 519 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE 519 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCE
Confidence 6889999999999887765432211111112367888899999999999987654
No 267
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.28 E-value=0.077 Score=46.61 Aligned_cols=182 Identities=12% Similarity=0.192 Sum_probs=103.8
Q ss_pred cCCEEEEecCCCcEEEEeCCCc-ceeeecCCCCeeEEEEeCC----CC---E-EEEEeC--CCcEEEEecCCCCCceeee
Q 043707 132 SGDLLYTGSDSKNIRVWKNLKE-FSGFKSNSGLVKAIIITGD----SN---K-IFTGHQ--DGKIRIWKVSRKNPSVHKR 200 (347)
Q Consensus 132 ~~~~l~tg~~dg~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~----~~---~-l~s~~~--Dg~I~vwd~~~~~~~~~~~ 200 (347)
...+++.....+-+.+||+... ++.+.. +.++.+..-|+ ++ + +++.-. +++|++|++...... ...
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 3446666667788999997533 333332 66777777663 22 2 333334 578999988532211 111
Q ss_pred eccc--ccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEE--cCC-CC-EEEEEeCCCcEEEEeCC-------CC
Q 043707 201 VGSL--PTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSL--NAE-QG-LLYSGSWDKTLKVWRIS-------DC 267 (347)
Q Consensus 201 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~--~~~-~~-~l~s~s~dg~i~vwdl~-------~~ 267 (347)
+... |. ..-...+..+++ ++. +. ++++...+|.+..|++. +.
T Consensus 116 i~~~~~pv-------------------------~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~ 170 (355)
T 3amr_A 116 MTDPDHPI-------------------------ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISG 170 (355)
T ss_dssp CSCTTSCE-------------------------ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEE
T ss_pred ccccccCc-------------------------CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccc
Confidence 1110 10 001144566776 664 43 68888889999999983 34
Q ss_pred EEEEEEecCCCcEEEEEeCCC-CEEEEEeCCCcEEEEEcccCCccceeeehhhh-hcc-CCcEEEEEEc--cCCC-EEEE
Q 043707 268 KCLESINAHDDAINSVVAGFD-SLVFTGSADGTVKVWRRELQGKGTKHFLAQVL-LKQ-ENAITALAVN--QESA-VVYC 341 (347)
Q Consensus 268 ~~~~~~~~h~~~v~~i~~~~~-~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~-~~h-~~~V~~l~~~--p~~~-~l~s 341 (347)
+.+++|.... .+-.|...+. +.|+.+-++.-|..++.+.... ....++... .++ ...+..|++- ++++ +|++
T Consensus 171 ~lVR~f~lgs-q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~-~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLiv 248 (355)
T 3amr_A 171 KKVRAFKMNS-QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGG-SNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMA 248 (355)
T ss_dssp EEEEEEECSS-CEEEEEEETTTTEEEEEETTTEEEEEECSTTSC-SCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEE
T ss_pred eEEEEecCCC-CcceEEEcCCCCeEEEecccceEEEEeCCcCCC-CCceEEEEecCCccccCcceEEEEecCCCCEEEEE
Confidence 6778887554 4666666654 5999999986665555442221 111122222 223 3478888884 5555 5665
Q ss_pred ec
Q 043707 342 GS 343 (347)
Q Consensus 342 gs 343 (347)
++
T Consensus 249 Ss 250 (355)
T 3amr_A 249 SS 250 (355)
T ss_dssp EE
T ss_pred Ec
Confidence 55
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.27 E-value=0.014 Score=56.47 Aligned_cols=212 Identities=10% Similarity=0.018 Sum_probs=104.0
Q ss_pred EeecCCEEEEecC-CCcEEEEeCCCcc-eeee-cCCCC-eeEEEEeCCCCEEEEEe-CC-----CcEEEEecCCCCCcee
Q 043707 129 LAASGDLLYTGSD-SKNIRVWKNLKEF-SGFK-SNSGL-VKAIIITGDSNKIFTGH-QD-----GKIRIWKVSRKNPSVH 198 (347)
Q Consensus 129 l~~~~~~l~tg~~-dg~I~vwd~~~~~-~~~~-~h~~~-V~~l~~sp~~~~l~s~~-~D-----g~I~vwd~~~~~~~~~ 198 (347)
+..++++++.|+. +..+++||..... .... -+... -.+++..++++.++.|+ .+ ..+.+||..+.+-...
T Consensus 250 ~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 250 MDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp ECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred CCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 3457888888884 4589999854331 1111 11111 23455667888999888 44 5689999876542111
Q ss_pred eee--ccccc----------ccceEEeccCCCe-------EEEEeec---ceeeeee-c---------CCCeeEEEEcC-
Q 043707 199 KRV--GSLPT----------FKDYVKSSVNPKN-------YVEVRRN---RNVLKIR-H---------YDAVSCLSLNA- 245 (347)
Q Consensus 199 ~~~--~~~~~----------~~~~~~~~~~~~~-------~~~~~~~---~~~~~~~-h---------~~~V~~l~~~~- 245 (347)
... ..++. ..-++....++.. .+..... .-....+ + ...-.++.|..
T Consensus 330 ~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~ 409 (656)
T 1k3i_A 330 PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAV 409 (656)
T ss_dssp TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETT
T ss_pred CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCC
Confidence 000 00110 0111222111110 1111110 0000000 0 11123444433
Q ss_pred CCCEEEEEeCCC-----------cEEEEeCCCCEEEEEE--ecCCCcE-EEEEeCCCC-EEEEEeCC-----------Cc
Q 043707 246 EQGLLYSGSWDK-----------TLKVWRISDCKCLESI--NAHDDAI-NSVVAGFDS-LVFTGSAD-----------GT 299 (347)
Q Consensus 246 ~~~~l~s~s~dg-----------~i~vwdl~~~~~~~~~--~~h~~~v-~~i~~~~~~-~l~s~~~d-----------g~ 299 (347)
++++++.|+.++ .|.+||..+.+-.... ..+.... .+++..+++ +++.|+.+ ..
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 677777777532 6788888776543332 1122222 233455666 67777654 56
Q ss_pred EEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 300 VKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 300 I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
+.+||.... .......+...........+.|++++++.||.
T Consensus 490 v~~ydp~t~----~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 490 PEIYVPEQD----TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEEGGGT----EEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eEEEcCCCC----ceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 899998743 22222222222222334556789999999985
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.27 E-value=0.014 Score=50.75 Aligned_cols=131 Identities=13% Similarity=0.070 Sum_probs=79.3
Q ss_pred CcEEEEeCC-CcceeeecCCCCeeEEEEeCCCCEEEEE-eCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeE
Q 043707 143 KNIRVWKNL-KEFSGFKSNSGLVKAIIITGDSNKIFTG-HQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNY 220 (347)
Q Consensus 143 g~I~vwd~~-~~~~~~~~h~~~V~~l~~sp~~~~l~s~-~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (347)
+.|..||.. .....+...-.....|+|+|+++.|+.+ ...+.|.++++............
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~------------------ 226 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV------------------ 226 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE------------------
T ss_pred ceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE------------------
Confidence 567777753 2222222222345679999999866655 55688999998753211000000
Q ss_pred EEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC----------CCcEEEEeCCCCEEEEEEecCC----CcEEEEEeC
Q 043707 221 VEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW----------DKTLKVWRISDCKCLESINAHD----DAINSVVAG 286 (347)
Q Consensus 221 ~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~----------dg~i~vwdl~~~~~~~~~~~h~----~~v~~i~~~ 286 (347)
.... ...+++.++|++.++... .+.|..+|. +++.+..+.... ..+..+++.
T Consensus 227 ------------~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~ 292 (322)
T 2fp8_A 227 ------------KIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEH 292 (322)
T ss_dssp ------------ECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEE
T ss_pred ------------eCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEe
Confidence 0112 567889999886666544 366888886 577777776442 346666663
Q ss_pred CCC-EEEEEeCCCcEEEEEcc
Q 043707 287 FDS-LVFTGSADGTVKVWRRE 306 (347)
Q Consensus 287 ~~~-~l~s~~~dg~I~vwd~~ 306 (347)
++ ++++...++.|.++++.
T Consensus 293 -~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 293 -DGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp -TTEEEEECSSCSEEEEEEC-
T ss_pred -CCEEEEeecCCCceEEEecc
Confidence 55 44455568899999886
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.22 E-value=0.005 Score=56.32 Aligned_cols=141 Identities=7% Similarity=0.010 Sum_probs=82.3
Q ss_pred CeeEEEEeC-CCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEE
Q 043707 163 LVKAIIITG-DSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCL 241 (347)
Q Consensus 163 ~V~~l~~sp-~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 241 (347)
....|+++| ++..|+.+...+.|+.+|+..+...... ........|
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~---------------------------------~~~~~P~~i 184 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY---------------------------------SGLSKVRTI 184 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE---------------------------------CCCSCEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe---------------------------------cCCCCcceE
Confidence 457889998 4556776666578888888765321110 133457789
Q ss_pred EEcCCCCEEEEEeCC-C----cEEEEeCCCCEEE--EEEecCCCcEEEEEeCC-CCEEE-EEeCCCcEEEEEcccCCccc
Q 043707 242 SLNAEQGLLYSGSWD-K----TLKVWRISDCKCL--ESINAHDDAINSVVAGF-DSLVF-TGSADGTVKVWRRELQGKGT 312 (347)
Q Consensus 242 ~~~~~~~~l~s~s~d-g----~i~vwdl~~~~~~--~~~~~h~~~v~~i~~~~-~~~l~-s~~~dg~I~vwd~~~~~~~~ 312 (347)
+|+++++.|+.+... + .+.+.+. .+... ..+.. ......++++| ++.|+ +-..++.|..++......
T Consensus 185 a~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-- 260 (430)
T 3tc9_A 185 CWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-- 260 (430)
T ss_dssp EECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE--
T ss_pred EEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE--
Confidence 999999966666642 2 2333432 22111 22221 23356778898 66544 445678899998863221
Q ss_pred eeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 313 KHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 313 ~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
..+... ........|+|+|++++|+.+.
T Consensus 261 --~~~~~~-~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 261 --TPLFTI-QDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp --EEEEEC-SSSSCCEEEEECTTSSEEEEEE
T ss_pred --EEEEEc-CCCCcceeEEEcCCCCEEEEEE
Confidence 011111 1123568999999999666554
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.22 E-value=0.092 Score=47.33 Aligned_cols=165 Identities=13% Similarity=0.073 Sum_probs=97.1
Q ss_pred CcEEEEeCCCc-ceeeecCCCCeeEEEEeCCCCEEEEE-eCCCcEEEEecCCCCC--ceeeeecccccccceEEeccCCC
Q 043707 143 KNIRVWKNLKE-FSGFKSNSGLVKAIIITGDSNKIFTG-HQDGKIRIWKVSRKNP--SVHKRVGSLPTFKDYVKSSVNPK 218 (347)
Q Consensus 143 g~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~~~~l~s~-~~Dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 218 (347)
..|+..++... ...+......+.+|+|.+.+..|+.. ...+.|+.+++..... .....+
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~----------------- 154 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI----------------- 154 (400)
T ss_dssp TEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEE-----------------
T ss_pred ceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEE-----------------
Confidence 56777775533 33333445678899999865555544 4567888888865321 000000
Q ss_pred eEEEEeecceeeeeecCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEe-
Q 043707 219 NYVEVRRNRNVLKIRHYDAVSCLSLNAE-QGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGS- 295 (347)
Q Consensus 219 ~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~- 295 (347)
.........|++.+. ++++++-...+.|.+.++........+...-.....|++.|. +.|+...
T Consensus 155 -------------~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 155 -------------SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp -------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEEC
T ss_pred -------------eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeC
Confidence 012345678899885 444455555788999998765444444434455789999885 5555443
Q ss_pred -CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 296 -ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 296 -~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
..+.|...++..... . .+ ....-.....|+++++++.|+.+.
T Consensus 222 ~~~~~I~~~~~dG~~~--~-~~---~~~~l~~P~glavd~~~~~lY~aD 264 (400)
T 3p5b_L 222 GTPAKIKKGGLNGVDI--Y-SL---VTENIQWPNGITLDLLSGRLYWVD 264 (400)
T ss_dssp SSSCCEEEEETTSCSC--E-EE---ECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCCcc--E-EE---EECCCCceEEEEEEeCCCEEEEEE
Confidence 247788888763221 1 11 112234678999998887777653
No 272
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.19 E-value=0.015 Score=50.72 Aligned_cols=161 Identities=11% Similarity=0.056 Sum_probs=94.9
Q ss_pred ecCCCCeeEEEEeCCCCEEEEEe-CCCcEEEEecCCCCCceeeeecccc-cccceEEeccCCCeEEEEeecceeeeeecC
Q 043707 158 KSNSGLVKAIIITGDSNKIFTGH-QDGKIRIWKVSRKNPSVHKRVGSLP-TFKDYVKSSVNPKNYVEVRRNRNVLKIRHY 235 (347)
Q Consensus 158 ~~h~~~V~~l~~sp~~~~l~s~~-~Dg~I~vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 235 (347)
.....--.+++|.+....|+.++ ..++|..||...+..... .+.... .. ...
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g-------------------------~~~ 62 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNG-------------------------DGE 62 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSS-------------------------CCS
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccC-------------------------CCc
Confidence 33445567899998555666666 789999999875532211 111000 00 011
Q ss_pred CCeeEEEE---cCCCCEEEEEe-------------CCCcEEEEeCC---CCEEEEEEe--cC-----------CCcEEEE
Q 043707 236 DAVSCLSL---NAEQGLLYSGS-------------WDKTLKVWRIS---DCKCLESIN--AH-----------DDAINSV 283 (347)
Q Consensus 236 ~~V~~l~~---~~~~~~l~s~s-------------~dg~i~vwdl~---~~~~~~~~~--~h-----------~~~v~~i 283 (347)
..+..|.| .+++.++++.. .+..+..||+. +++.+.... .. ....+.+
T Consensus 63 ~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 63 QQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEE
T ss_pred ceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCcee
Confidence 13578999 68877776543 26779999999 787765554 11 1247899
Q ss_pred EeCCCC-EEEEEeCC-CcEEEEEcccCCccce-eeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 284 VAGFDS-LVFTGSAD-GTVKVWRRELQGKGTK-HFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 284 ~~~~~~-~l~s~~~d-g~I~vwd~~~~~~~~~-~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
+..++| ..++++.. +.|...+.. ++... ..............+.|+++|++..|++...+|
T Consensus 143 avD~~GnaYVt~s~~~~~I~rV~pd--G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g 206 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGMPAIARVSAD--GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPR 206 (334)
T ss_dssp EECTTSCEEEEEEESSCEEEEECTT--SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSS
T ss_pred EECCCCCEEEeCCCCCCeEEEEeCC--CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCC
Confidence 999998 44456666 666555543 22111 111110111223467999999998888775544
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.18 E-value=0.098 Score=45.39 Aligned_cols=165 Identities=13% Similarity=0.073 Sum_probs=94.1
Q ss_pred CcEEEEeCCCc-ceeeecCCCCeeEEEEeCCCCEEE-EEeCCCcEEEEecCCCCC--ceeeeecccccccceEEeccCCC
Q 043707 143 KNIRVWKNLKE-FSGFKSNSGLVKAIIITGDSNKIF-TGHQDGKIRIWKVSRKNP--SVHKRVGSLPTFKDYVKSSVNPK 218 (347)
Q Consensus 143 g~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~~~~l~-s~~~Dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 218 (347)
..|+..+.... ...+...-..+.+++|.+.+..|+ +-...+.|..+++..... .....+.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~---------------- 73 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS---------------- 73 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----------------
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----------------
Confidence 45777775532 222333345678999998655554 445568899998875210 0000000
Q ss_pred eEEEEeecceeeeeecCCCeeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEeC
Q 043707 219 NYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLL-YSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGSA 296 (347)
Q Consensus 219 ~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~~ 296 (347)
........+++.+.+..| ++-...+.|.+.++........+.........+++.|. +.|+.+..
T Consensus 74 --------------~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~ 139 (316)
T 1ijq_A 74 --------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 139 (316)
T ss_dssp --------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC
T ss_pred --------------CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEcc
Confidence 122345788898755544 45456789999998754333333333456789999984 55554443
Q ss_pred -C-CcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 297 -D-GTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 297 -d-g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
. +.|...++..... ..+. ...-.....|+++++++.|+.+.
T Consensus 140 ~~~~~I~~~~~dG~~~---~~~~---~~~~~~P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 140 GTPAKIKKGGLNGVDI---YSLV---TENIQWPNGITLDLLSGRLYWVD 182 (316)
T ss_dssp SSSCEEEEEETTSCCE---EEEE---CSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEcCCCCCe---EEEE---ECCCCCceEEEEeccCCEEEEEE
Confidence 2 6788887752211 1111 11234678999998877776654
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.18 E-value=0.12 Score=46.27 Aligned_cols=150 Identities=8% Similarity=0.108 Sum_probs=88.3
Q ss_pred cEEEEeec--CC-EEEEecCCCcEEEEeCCCc-ceee-ecCCCCeeEEEEeCCCCE-EEEEeCCCcEEEEecCCCCCcee
Q 043707 125 HIYSLAAS--GD-LLYTGSDSKNIRVWKNLKE-FSGF-KSNSGLVKAIIITGDSNK-IFTGHQDGKIRIWKVSRKNPSVH 198 (347)
Q Consensus 125 ~V~~l~~~--~~-~l~tg~~dg~I~vwd~~~~-~~~~-~~h~~~V~~l~~sp~~~~-l~s~~~Dg~I~vwd~~~~~~~~~ 198 (347)
...+++++ ++ ++++-...+.|+.++.... ...+ .........+++.+.+.. +++-...+.|.+.+++.......
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 196 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEE
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEe
Confidence 35556654 33 5555556778888886533 2222 222235678899875444 45555567788877764431111
Q ss_pred eeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-C-CcEEEEeCCCCEEEEEEecC
Q 043707 199 KRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-D-KTLKVWRISDCKCLESINAH 276 (347)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-d-g~i~vwdl~~~~~~~~~~~h 276 (347)
. .........|+++|.+..|+.... . +.|..+++............
T Consensus 197 ~--------------------------------~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~ 244 (386)
T 3v65_B 197 L--------------------------------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH 244 (386)
T ss_dssp E--------------------------------CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred e--------------------------------cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC
Confidence 0 012345678999987776666654 3 67888887543222222333
Q ss_pred CCcEEEEEeCCC-CEE-EEEeCCCcEEEEEcc
Q 043707 277 DDAINSVVAGFD-SLV-FTGSADGTVKVWRRE 306 (347)
Q Consensus 277 ~~~v~~i~~~~~-~~l-~s~~~dg~I~vwd~~ 306 (347)
-...+.|+++++ +.| ++-...+.|..+|+.
T Consensus 245 ~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 245 LFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp CSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 445788999865 444 444567789999876
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.14 E-value=0.049 Score=45.80 Aligned_cols=157 Identities=8% Similarity=0.099 Sum_probs=91.2
Q ss_pred eecCCCCeeEEEEeCCCCEEEE-EeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecC
Q 043707 157 FKSNSGLVKAIIITGDSNKIFT-GHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHY 235 (347)
Q Consensus 157 ~~~h~~~V~~l~~sp~~~~l~s-~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 235 (347)
+.+-...+..++|.|++..|++ ...++.|...|.. ++......+. -.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~-------------------------------g~ 69 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLD-------------------------------FV 69 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECS-------------------------------SC
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecC-------------------------------CC
Confidence 3444467999999997665554 6677888888876 4422222111 22
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE---EEEEEe------cCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEc
Q 043707 236 DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK---CLESIN------AHDDAINSVVAGFDS-LVFTGSADGTVKVWRR 305 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~---~~~~~~------~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~ 305 (347)
...-.|++.+++.++++.-.++.+.++++.... .+.... ........|+|.|++ .|+++.......+|.+
T Consensus 70 ~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 70 KDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp SSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 456678888888766665567889998876443 223332 123346899999986 5665655555556655
Q ss_pred ccCCccceeeehh----hhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 306 ELQGKGTKHFLAQ----VLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 306 ~~~~~~~~~~~~~----~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
............. .-..+...+.+|+++|....|+.-|..
T Consensus 150 ~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~ 193 (255)
T 3qqz_A 150 NGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHE 193 (255)
T ss_dssp ESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETT
T ss_pred cccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECC
Confidence 4100000000110 001133467899999987666665543
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.10 E-value=0.062 Score=49.05 Aligned_cols=140 Identities=8% Similarity=0.016 Sum_probs=81.1
Q ss_pred CEEEEecCCCcEEEEeC-CCcceeeecCCCCeeEEEEeCCCCEEEEEeCCC----c-EEEEecCCCCCceeeeecccccc
Q 043707 134 DLLYTGSDSKNIRVWKN-LKEFSGFKSNSGLVKAIIITGDSNKIFTGHQDG----K-IRIWKVSRKNPSVHKRVGSLPTF 207 (347)
Q Consensus 134 ~~l~tg~~dg~I~vwd~-~~~~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg----~-I~vwd~~~~~~~~~~~~~~~~~~ 207 (347)
..|+.+...+.|+.++. ...+..+........+|+++++++ |+.+...+ . +...+..... ....
T Consensus 153 g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~-~~~~-------- 222 (433)
T 4hw6_A 153 DDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF-TERL-------- 222 (433)
T ss_dssp CEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT-CCEE--------
T ss_pred CEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe-eccc--------
Confidence 45555544488999986 344444444445689999999998 44444322 1 2222211110 0000
Q ss_pred cceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCEEEEEE-ecC-CCcEEEEE
Q 043707 208 KDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNA-EQGLLYSGSWDKTLKVWRISDCKCLESI-NAH-DDAINSVV 284 (347)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~-~~~~l~s~s~dg~i~vwdl~~~~~~~~~-~~h-~~~v~~i~ 284 (347)
..........+++++ ++.++++-..++.|+.+|..+++....+ ... ...-..|+
T Consensus 223 -----------------------~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia 279 (433)
T 4hw6_A 223 -----------------------SLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIV 279 (433)
T ss_dssp -----------------------EEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEE
T ss_pred -----------------------cccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEE
Confidence 001223456688899 5665555556788999998877653333 211 22234699
Q ss_pred eCCCC-EEE-EEeCCCcEEEEEcc
Q 043707 285 AGFDS-LVF-TGSADGTVKVWRRE 306 (347)
Q Consensus 285 ~~~~~-~l~-s~~~dg~I~vwd~~ 306 (347)
++|++ .|+ +-...+.|+.++..
T Consensus 280 ~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 280 WHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EeCCCCEEEEEeCCCCEEEEEeCC
Confidence 99987 354 44567889998865
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.07 E-value=0.033 Score=48.48 Aligned_cols=158 Identities=5% Similarity=0.010 Sum_probs=94.8
Q ss_pred EEeec--CCEEEEe-cCCCcEEEEeCCCc-ceee--ec----CC--CCeeEEEE---eCCCCEEEEEe------------
Q 043707 128 SLAAS--GDLLYTG-SDSKNIRVWKNLKE-FSGF--KS----NS--GLVKAIII---TGDSNKIFTGH------------ 180 (347)
Q Consensus 128 ~l~~~--~~~l~tg-~~dg~I~vwd~~~~-~~~~--~~----h~--~~V~~l~~---sp~~~~l~s~~------------ 180 (347)
+..|+ ...|+.+ -..++|..|+.... ...+ .. .. ..+..|.| .|+++++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 45554 3444444 47899999986522 2222 11 11 13679999 68876666543
Q ss_pred -CCCcEEEEecC---CCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeee-cCCCeeEEEEcCCCCEEEEEeC
Q 043707 181 -QDGKIRIWKVS---RKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIR-HYDAVSCLSLNAEQGLLYSGSW 255 (347)
Q Consensus 181 -~Dg~I~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~~~~~~l~s~s~ 255 (347)
.+..|..+|+. +++......+....... ..+.+ -......++..++|+..++++.
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~--------------------~~~~g~~~~~~nDvavD~~GnaYVt~s~ 156 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEF--------------------EKKAGKRPFGVVQSAQDRDGNSYVAFAL 156 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHH--------------------HHHHSSCCEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccc--------------------cccccccccCCceeEECCCCCEEEeCCC
Confidence 26779999998 66654443322110000 00000 1123678999999999999888
Q ss_pred C-CcEEEEeCCCCEEEEEEe------cCCCcEEEEEeCCCC-EEEEEeCCCcEEEEEcc
Q 043707 256 D-KTLKVWRISDCKCLESIN------AHDDAINSVVAGFDS-LVFTGSADGTVKVWRRE 306 (347)
Q Consensus 256 d-g~i~vwdl~~~~~~~~~~------~h~~~v~~i~~~~~~-~l~s~~~dg~I~vwd~~ 306 (347)
. +.|...+.. ++.+..+. ......+.|+++|++ .|++...+|.|..+|+.
T Consensus 157 ~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 157 GMPAIARVSAD-GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp SSCEEEEECTT-SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCCeEEEEeCC-CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 8 887777754 33333321 112236789999998 66666559999999987
No 278
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.07 E-value=0.037 Score=52.75 Aligned_cols=56 Identities=16% Similarity=0.077 Sum_probs=38.7
Q ss_pred CCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCc
Q 043707 255 WDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 255 ~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~ 310 (347)
.+|.|..||+.+++.+-+.+.............+++++.++.|+.|+.||.++++.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCE
Confidence 35789999999999877665221111111122356888899999999999987654
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.02 E-value=0.078 Score=46.17 Aligned_cols=165 Identities=7% Similarity=0.003 Sum_probs=94.4
Q ss_pred CCcEEEEeCCCc---ceeeecCCCCeeEEEEeCC-CCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCC
Q 043707 142 SKNIRVWKNLKE---FSGFKSNSGLVKAIIITGD-SNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNP 217 (347)
Q Consensus 142 dg~I~vwd~~~~---~~~~~~h~~~V~~l~~sp~-~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (347)
...|+..++... ..........+.+++|.+. +..+++-...+.|..+++..........
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~----------------- 74 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVV----------------- 74 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEE-----------------
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEE-----------------
Confidence 356777775432 1111112235678999985 4444555567788888887653111000
Q ss_pred CeEEEEeecceeeeeecCCCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEe
Q 043707 218 KNYVEVRRNRNVLKIRHYDAVSCLSLNAEQG-LLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGS 295 (347)
Q Consensus 218 ~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~ 295 (347)
.........+++.+.+. ++++-...+.|.++++........+.........|++.|. +.|+.+.
T Consensus 75 --------------~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 75 --------------VSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp --------------EECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEE
T ss_pred --------------cCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEe
Confidence 01223456788887544 4455455788999998643322223234456788999875 5555554
Q ss_pred --CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 296 --ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 296 --~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
..+.|...++..... . .+ ....-...+.|+|+++++.|+.+.
T Consensus 141 ~~~~~~I~r~~~dG~~~--~-~~---~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 141 WGEVPKIERAGMDGSSR--F-II---INSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp CSSSCEEEEEETTSCSC--E-EE---ECSSCSCEEEEEEETTTTEEEEEE
T ss_pred cCCCCEEEEEEcCCCCe--E-EE---EECCCCCccEEEEeccCCEEEEEE
Confidence 357788777752211 1 11 111234578999999877776654
No 280
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.02 E-value=0.067 Score=48.17 Aligned_cols=156 Identities=12% Similarity=0.125 Sum_probs=90.8
Q ss_pred ecCCEEEEecCCCcEEEEeCC--CcceeeecC----CCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeeccc
Q 043707 131 ASGDLLYTGSDSKNIRVWKNL--KEFSGFKSN----SGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSL 204 (347)
Q Consensus 131 ~~~~~l~tg~~dg~I~vwd~~--~~~~~~~~h----~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~ 204 (347)
-+|.-++.+- ++.||.-+.. ...+.+..- -..|..+..+|+|++||..+ +..|.|-.+..+...........
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 3444444443 2566666643 224443332 12678899999999988886 55899998874321111000000
Q ss_pred ccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC---CCEEEEEeCCCcEEEEeCCCC--EEEEEEe-----
Q 043707 205 PTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE---QGLLYSGSWDKTLKVWRISDC--KCLESIN----- 274 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~---~~~l~s~s~dg~i~vwdl~~~--~~~~~~~----- 274 (347)
+. ......-+.. .......|..+.|||- +..|++-..|++|++||+... ++. .++
T Consensus 108 ~~------------q~~ty~l~~~--~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~ 172 (452)
T 3pbp_A 108 AF------------QIFHYSIDEE--EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNS 172 (452)
T ss_dssp TT------------EEEEEEGGGC--C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSE
T ss_pred cc------------ceeEEEcCCc--ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccc
Confidence 00 0000000000 0114678999999994 578999999999999999752 222 332
Q ss_pred ----cCCCcEEEEEeCCCC---EEEEEeCCCcEEEE
Q 043707 275 ----AHDDAINSVVAGFDS---LVFTGSADGTVKVW 303 (347)
Q Consensus 275 ----~h~~~v~~i~~~~~~---~l~s~~~dg~I~vw 303 (347)
.....|.+++|..++ ++++...+|.|+-.
T Consensus 173 fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 173 FGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 223568899999887 45556688887654
No 281
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.01 E-value=0.04 Score=53.22 Aligned_cols=67 Identities=16% Similarity=0.239 Sum_probs=43.3
Q ss_pred EEee-cCCEEEEecCCC-----------cEEEEeCCCc----ceeee-cCCCCeeEEEEeCCCCEEEEEeC-CCcEEEEe
Q 043707 128 SLAA-SGDLLYTGSDSK-----------NIRVWKNLKE----FSGFK-SNSGLVKAIIITGDSNKIFTGHQ-DGKIRIWK 189 (347)
Q Consensus 128 ~l~~-~~~~l~tg~~dg-----------~I~vwd~~~~----~~~~~-~h~~~V~~l~~sp~~~~l~s~~~-Dg~I~vwd 189 (347)
++.+ ++++++.|+.+. .+.+||.... +..+. .+.....++++..+++.++.|+. +..+.+||
T Consensus 192 av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd 271 (656)
T 1k3i_A 192 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYD 271 (656)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEE
T ss_pred EEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEec
Confidence 4444 677888876543 5788885432 22221 13333445778889999999984 56899999
Q ss_pred cCCCC
Q 043707 190 VSRKN 194 (347)
Q Consensus 190 ~~~~~ 194 (347)
..+.+
T Consensus 272 ~~t~~ 276 (656)
T 1k3i_A 272 SSSDS 276 (656)
T ss_dssp GGGTE
T ss_pred CcCCc
Confidence 88653
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.98 E-value=0.19 Score=45.18 Aligned_cols=153 Identities=8% Similarity=0.089 Sum_probs=92.5
Q ss_pred cccEEEEeec--CC-EEEEecCCCcEEEEeCCC-----cceee-ecCCCCeeEEEEeC-CCCEEEEEeCCCcEEEEecCC
Q 043707 123 EGHIYSLAAS--GD-LLYTGSDSKNIRVWKNLK-----EFSGF-KSNSGLVKAIIITG-DSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 123 ~~~V~~l~~~--~~-~l~tg~~dg~I~vwd~~~-----~~~~~-~~h~~~V~~l~~sp-~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
...+.+++++ ++ ++.+-...+.|+.++... ....+ ...-.....|++.+ .++.+++-...+.|.+.+++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 3456677765 34 444545667888887543 12222 22335678899998 444555555677888888875
Q ss_pred CCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCEEE
Q 043707 193 KNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW--DKTLKVWRISDCKCL 270 (347)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~--dg~i~vwdl~~~~~~ 270 (347)
....... .........|+++|.+..|+...+ .+.|...++......
T Consensus 191 ~~~~~l~--------------------------------~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 191 VKRKTLF--------------------------------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp CSEEEEE--------------------------------ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CceEEEE--------------------------------eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 4311110 012345678999997777776654 367888888643332
Q ss_pred EEEecCCCcEEEEEeCCCC-EEEEE-eCCCcEEEEEccc
Q 043707 271 ESINAHDDAINSVVAGFDS-LVFTG-SADGTVKVWRREL 307 (347)
Q Consensus 271 ~~~~~h~~~v~~i~~~~~~-~l~s~-~~dg~I~vwd~~~ 307 (347)
..+...-...+.|++.+++ .|+.+ ...+.|..+|+..
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 2233333567899999764 55444 4577899999863
No 283
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.97 E-value=0.0078 Score=57.17 Aligned_cols=31 Identities=26% Similarity=0.270 Sum_probs=27.1
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEecC
Q 043707 246 EQGLLYSGSWDKTLKVWRISDCKCLESINAH 276 (347)
Q Consensus 246 ~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h 276 (347)
.+.+++.++.|+.|++||.++++.+.+++..
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 4678888999999999999999999888754
No 284
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.95 E-value=0.18 Score=44.58 Aligned_cols=171 Identities=11% Similarity=0.096 Sum_probs=93.8
Q ss_pred CCCcEEEEeCCCc---cee--eec-----CCCCeeEEEEeC--CCC-EEEEE-eC--CCcEEEEecCCCCCceeeeeccc
Q 043707 141 DSKNIRVWKNLKE---FSG--FKS-----NSGLVKAIIITG--DSN-KIFTG-HQ--DGKIRIWKVSRKNPSVHKRVGSL 204 (347)
Q Consensus 141 ~dg~I~vwd~~~~---~~~--~~~-----h~~~V~~l~~sp--~~~-~l~s~-~~--Dg~I~vwd~~~~~~~~~~~~~~~ 204 (347)
.+|.|.++|..+. ... +.+ .......|.+.+ ++. +|+.+ .. +.+|.+|+++....... .+...
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~-~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLL-HLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEE-EEEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEE-EEecc
Confidence 6899999996521 111 111 234567777765 343 34433 33 45677777765432111 00000
Q ss_pred ccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-----------------CCcEEEEeCCCC
Q 043707 205 PTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-----------------DKTLKVWRISDC 267 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-----------------dg~i~vwdl~~~ 267 (347)
. -......+.+.+.++|.++++... .|.+..+|. +
T Consensus 160 ~--------------------------g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~ 211 (355)
T 3sre_A 160 R--------------------------HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N 211 (355)
T ss_dssp C--------------------------CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T
T ss_pred c--------------------------cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C
Confidence 0 012235678888888887776541 244555554 3
Q ss_pred EEEEEEecCCCcEEEEEeCCCC-EE-EEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEcc-CCCEEEEecC
Q 043707 268 KCLESINAHDDAINSVVAGFDS-LV-FTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQ-ESAVVYCGSS 344 (347)
Q Consensus 268 ~~~~~~~~h~~~v~~i~~~~~~-~l-~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p-~~~~l~sgs~ 344 (347)
+ +..+...-..-+.|+|+||+ .| ++-+..+.|..|++...+..... ..+ ......-.+++.+ +|++.+++..
T Consensus 212 ~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~---~~~-~~~g~PDGi~vD~e~G~lwva~~~ 286 (355)
T 3sre_A 212 D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL---RVL-SFDTLVDNISVDPVTGDLWVGCHP 286 (355)
T ss_dssp C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE---EEE-ECSSEEEEEEECTTTCCEEEEEES
T ss_pred e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC---EEE-eCCCCCceEEEeCCCCcEEEEecC
Confidence 2 22222223456899999998 44 45556889999998643321111 111 2245678899999 5888776643
Q ss_pred C
Q 043707 345 D 345 (347)
Q Consensus 345 D 345 (347)
+
T Consensus 287 ~ 287 (355)
T 3sre_A 287 N 287 (355)
T ss_dssp C
T ss_pred C
Confidence 3
No 285
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.82 E-value=0.16 Score=43.58 Aligned_cols=111 Identities=14% Similarity=0.121 Sum_probs=69.4
Q ss_pred CCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEE
Q 043707 162 GLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCL 241 (347)
Q Consensus 162 ~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 241 (347)
.....++|.++++.+++-..++.|..||..... .. .. .....+..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~--~~-------------------------------~~~~~p~gi 77 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QI--HA-------------------------------TVEGKVSGL 77 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EE--EE-------------------------------ECSSEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EE--EE-------------------------------eCCCCceeE
Confidence 457789999998877776678899988876431 10 00 122357789
Q ss_pred EEcCCCCEEEEEeCCC--cEEEEeCCCCEEEEEEec-CCCcEEEEEeCCCCEEEEEe-CCCcEEEEEcc
Q 043707 242 SLNAEQGLLYSGSWDK--TLKVWRISDCKCLESINA-HDDAINSVVAGFDSLVFTGS-ADGTVKVWRRE 306 (347)
Q Consensus 242 ~~~~~~~~l~s~s~dg--~i~vwdl~~~~~~~~~~~-h~~~v~~i~~~~~~~l~s~~-~dg~I~vwd~~ 306 (347)
++.++++++++..... .|..+|..+++....... .......++..+++.++... .++.|.++|..
T Consensus 78 a~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~ 146 (306)
T 2p4o_A 78 AFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVV 146 (306)
T ss_dssp EECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETT
T ss_pred EEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCC
Confidence 9999998666554322 477778777765433221 12233445555566544444 58888888875
No 286
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.81 E-value=0.24 Score=43.65 Aligned_cols=150 Identities=8% Similarity=0.110 Sum_probs=89.7
Q ss_pred cEEEEeec--CC-EEEEecCCCcEEEEeCCCc-ceee-ecCCCCeeEEEEeCCCC-EEEEEeCCCcEEEEecCCCCCcee
Q 043707 125 HIYSLAAS--GD-LLYTGSDSKNIRVWKNLKE-FSGF-KSNSGLVKAIIITGDSN-KIFTGHQDGKIRIWKVSRKNPSVH 198 (347)
Q Consensus 125 ~V~~l~~~--~~-~l~tg~~dg~I~vwd~~~~-~~~~-~~h~~~V~~l~~sp~~~-~l~s~~~Dg~I~vwd~~~~~~~~~ 198 (347)
...+++++ .+ ++++-...+.|+.++.... ...+ .........+++.+.+. .+++-...+.|.+.+++.......
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 153 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEE
Confidence 35566654 33 4455556788888885533 2222 22224567899998544 445555677899988875432111
Q ss_pred eeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC-C-CcEEEEeCCCCEEEEEE-ec
Q 043707 199 KRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW-D-KTLKVWRISDCKCLESI-NA 275 (347)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~-d-g~i~vwdl~~~~~~~~~-~~ 275 (347)
. .........++++|.+..|+.... . +.|...++... ....+ ..
T Consensus 154 ~--------------------------------~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~ 200 (349)
T 3v64_C 154 L--------------------------------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADT 200 (349)
T ss_dssp E--------------------------------CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCS
T ss_pred E--------------------------------eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEEC
Confidence 0 012345678999997666666554 3 67888887543 22232 22
Q ss_pred CCCcEEEEEeCCC-CEEE-EEeCCCcEEEEEccc
Q 043707 276 HDDAINSVVAGFD-SLVF-TGSADGTVKVWRREL 307 (347)
Q Consensus 276 h~~~v~~i~~~~~-~~l~-s~~~dg~I~vwd~~~ 307 (347)
.-...+.|+++++ +.|+ +-...+.|..+|+..
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 3345788999975 4444 445677899999863
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.79 E-value=0.28 Score=48.37 Aligned_cols=168 Identities=13% Similarity=0.052 Sum_probs=95.8
Q ss_pred CCcEEEEeCCC-cceeeecCCCCeeEEEEeCCCCE-EEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCe
Q 043707 142 SKNIRVWKNLK-EFSGFKSNSGLVKAIIITGDSNK-IFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKN 219 (347)
Q Consensus 142 dg~I~vwd~~~-~~~~~~~h~~~V~~l~~sp~~~~-l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (347)
...|+..++.. ....+......+.+|+|.+.... +++-...+.|+.+++.........
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~-------------------- 462 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-------------------- 462 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C--------------------
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcce--------------------
Confidence 35677776542 23333444567889999985444 445555678888888653210000
Q ss_pred EEEEeecceeeeeecCCCeeEEEEcCCCCEEEE-EeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEeC-
Q 043707 220 YVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYS-GSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGSA- 296 (347)
Q Consensus 220 ~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s-~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~~- 296 (347)
..+..........|++.+.++.|+. -...+.|.+.++........+.........|++.|. +.|+....
T Consensus 463 --------~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g 534 (791)
T 3m0c_C 463 --------DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 534 (791)
T ss_dssp --------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS
T ss_pred --------eEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC
Confidence 0000012345667999887655554 445788999998755433333334456789999886 55555442
Q ss_pred -CCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 297 -DGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 297 -dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
.+.|.+.++..... ...+...-.....|++++.+..|+.+-
T Consensus 535 ~~~~I~~~~~dG~~~------~~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 535 TPAKIKKGGLNGVDI------YSLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp SSCEEEEEETTSCCE------EEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEecCCCce------EEEEeCCCCCceEEEEecCCCeEEEEe
Confidence 36788877752211 111112234688899998777776653
No 288
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.62 E-value=0.3 Score=42.28 Aligned_cols=149 Identities=9% Similarity=0.116 Sum_probs=89.8
Q ss_pred cEEEEeec--CC-EEEEecCCCcEEEEeCCC-----cceee-ecCCCCeeEEEEeCCCCEE-EEEeCCCcEEEEecCCCC
Q 043707 125 HIYSLAAS--GD-LLYTGSDSKNIRVWKNLK-----EFSGF-KSNSGLVKAIIITGDSNKI-FTGHQDGKIRIWKVSRKN 194 (347)
Q Consensus 125 ~V~~l~~~--~~-~l~tg~~dg~I~vwd~~~-----~~~~~-~~h~~~V~~l~~sp~~~~l-~s~~~Dg~I~vwd~~~~~ 194 (347)
...++.++ ++ ++++-..++.|+.++... ....+ ...-.....+++.+.+..| ++-...+.|.+.+++...
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc
Confidence 44566654 34 555556678899988653 22222 2222456889998754444 455667889998886542
Q ss_pred CceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC--CcEEEEeCCCCEEEEE
Q 043707 195 PSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD--KTLKVWRISDCKCLES 272 (347)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d--g~i~vwdl~~~~~~~~ 272 (347)
..... .........++++|.+..|+..... +.|...++. ++....
T Consensus 111 ~~~~~--------------------------------~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~ 157 (316)
T 1ijq_A 111 RKTLF--------------------------------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYS 157 (316)
T ss_dssp EEEEE--------------------------------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEE
T ss_pred eEEEE--------------------------------ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEE
Confidence 11100 0123456789999977766666653 678888875 333333
Q ss_pred E-ecCCCcEEEEEeCCCC-EEE-EEeCCCcEEEEEcc
Q 043707 273 I-NAHDDAINSVVAGFDS-LVF-TGSADGTVKVWRRE 306 (347)
Q Consensus 273 ~-~~h~~~v~~i~~~~~~-~l~-s~~~dg~I~vwd~~ 306 (347)
+ ...-...+.|++.+++ .|+ +-...+.|..+|+.
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 3 2234567899999764 444 44567799999986
No 289
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.62 E-value=0.011 Score=56.33 Aligned_cols=49 Identities=14% Similarity=0.165 Sum_probs=35.0
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcE-EEEEeCCCC--EEEEE
Q 043707 246 EQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAI-NSVVAGFDS--LVFTG 294 (347)
Q Consensus 246 ~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v-~~i~~~~~~--~l~s~ 294 (347)
.+.+++.++.|+.++.||.++++.+-+++.....+ .-+.+..++ ++++.
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 46788889999999999999999999987644322 124454566 44433
No 290
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.60 E-value=0.093 Score=46.39 Aligned_cols=103 Identities=15% Similarity=0.204 Sum_probs=59.5
Q ss_pred CCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEE
Q 043707 162 GLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCL 241 (347)
Q Consensus 162 ~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 241 (347)
.....|+|.|+|++ +.+..+|.|++++ .++. ..+...+ ...........|
T Consensus 31 ~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~---~~~~~~~------------------------v~~~g~~~p~gi 80 (352)
T 2ism_A 31 EVPWALAFLPDGGM-LIAERPGRIRLFR--EGRL---STYAELS------------------------VYHRGESGLLGL 80 (352)
T ss_dssp SCEEEEEECTTSCE-EEEETTTEEEEEE--TTEE---EEEEECC------------------------CCCSTTCSEEEE
T ss_pred CCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCc---cEeecce------------------------EeecCCCCceeE
Confidence 34679999999974 5556679999988 3321 1111000 000124567889
Q ss_pred EEcCC---CCEEEEEeC-C-----CcEEEEeCCCC-----EEE-EEEec---CCCcEEEEEeCCCCEEEEE
Q 043707 242 SLNAE---QGLLYSGSW-D-----KTLKVWRISDC-----KCL-ESINA---HDDAINSVVAGFDSLVFTG 294 (347)
Q Consensus 242 ~~~~~---~~~l~s~s~-d-----g~i~vwdl~~~-----~~~-~~~~~---h~~~v~~i~~~~~~~l~s~ 294 (347)
+++|+ +..|+.+.. . +.|..|++... +.+ ..+.. .......|+|.||+.|+.+
T Consensus 81 a~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 81 ALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp EECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred EECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 99998 555555543 2 56888887643 122 22331 1123468999999955544
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.60 E-value=0.64 Score=45.79 Aligned_cols=151 Identities=7% Similarity=0.071 Sum_probs=91.3
Q ss_pred ccEEEEeec---CCEEEEecCCCcEEEEeCCCc------ceeeecCCCCeeEEEEeCCCCEE-EEEeCCCcEEEEecCCC
Q 043707 124 GHIYSLAAS---GDLLYTGSDSKNIRVWKNLKE------FSGFKSNSGLVKAIIITGDSNKI-FTGHQDGKIRIWKVSRK 193 (347)
Q Consensus 124 ~~V~~l~~~---~~~l~tg~~dg~I~vwd~~~~------~~~~~~h~~~V~~l~~sp~~~~l-~s~~~Dg~I~vwd~~~~ 193 (347)
..+.+|+++ +.++++-...+.|+.+++... ...+.........|++.+.++.| ++-...+.|.+.+++..
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 345566654 335555556677888875431 12222233567789999866544 45556788988888754
Q ss_pred CCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC--CcEEEEeCCCCEEEE
Q 043707 194 NPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD--KTLKVWRISDCKCLE 271 (347)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d--g~i~vwdl~~~~~~~ 271 (347)
...... .........|+++|.+..|+...+. +.|.+.++.......
T Consensus 504 ~~~~l~--------------------------------~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 504 KRKTLF--------------------------------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp SEEEEE--------------------------------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred eEEEEE--------------------------------eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 311110 0133457889999987777776643 678888886444333
Q ss_pred EEecCCCcEEEEEeCCC-CEEEEE-eCCCcEEEEEcc
Q 043707 272 SINAHDDAINSVVAGFD-SLVFTG-SADGTVKVWRRE 306 (347)
Q Consensus 272 ~~~~h~~~v~~i~~~~~-~~l~s~-~~dg~I~vwd~~ 306 (347)
.+...-...+.|++.+. +.|+.+ ...+.|...++.
T Consensus 552 lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 552 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 33333456888999865 455544 456788888886
No 292
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.57 E-value=0.11 Score=42.30 Aligned_cols=147 Identities=6% Similarity=-0.042 Sum_probs=78.3
Q ss_pred CeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeec--CCCeeE
Q 043707 163 LVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRH--YDAVSC 240 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~V~~ 240 (347)
.+.+++|+|++.+.+. .+|.+.-.+..+.......... ..++. -..-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~---------------------------t~IG~~Gw~~F~a 92 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA---------------------------KKIGNGGWNQFQF 92 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC---------------------------EEEECSCGGGCSE
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc---------------------------cEecccccccceE
Confidence 6789999999875555 6776555554332211100000 00000 011467
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCEEE------EEE-ecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccce
Q 043707 241 LSLNAEQGLLYSGSWDKTLKVWRISDCKCL------ESI-NAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTK 313 (347)
Q Consensus 241 l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~------~~~-~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~ 313 (347)
+.|.+++.+.++ .||.|+-++-.+...- ..+ ..-=..+..|.+.|+|.|.+.. |+.++-+....... ..
T Consensus 93 ~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~-~~ 168 (236)
T 1tl2_A 93 LFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQ-DN 168 (236)
T ss_dssp EEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTT-CC
T ss_pred EEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCC-cc
Confidence 899999988887 4698887775331100 111 1111457899999999888777 88854322221110 01
Q ss_pred eeehhhhh--ccCCcEEEEEEccCCCEEEEe
Q 043707 314 HFLAQVLL--KQENAITALAVNQESAVVYCG 342 (347)
Q Consensus 314 ~~~~~~~~--~h~~~V~~l~~~p~~~~l~sg 342 (347)
........ ......+-+.|.+++.+.++.
T Consensus 169 wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 169 WLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp HHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred cccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 10011111 122245567788888776655
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.55 E-value=0.34 Score=42.08 Aligned_cols=149 Identities=10% Similarity=0.087 Sum_probs=91.2
Q ss_pred cEEEEeec---CCEEEEecCCCcEEEEeCCCcc---eeeecCCCCeeEEEEeCC-CCEEEEEeCCCcEEEEecCCCCCce
Q 043707 125 HIYSLAAS---GDLLYTGSDSKNIRVWKNLKEF---SGFKSNSGLVKAIIITGD-SNKIFTGHQDGKIRIWKVSRKNPSV 197 (347)
Q Consensus 125 ~V~~l~~~---~~~l~tg~~dg~I~vwd~~~~~---~~~~~h~~~V~~l~~sp~-~~~l~s~~~Dg~I~vwd~~~~~~~~ 197 (347)
...+++++ +.++.+-...+.|+.++..... ..+...-.....+++.+. +..+++-...+.|.+++++......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 45566664 4455566667889888854331 122222345778999974 4445555567789999887543211
Q ss_pred eeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeC--CCcEEEEeCCCCEEEEEE-e
Q 043707 198 HKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSW--DKTLKVWRISDCKCLESI-N 274 (347)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~--dg~i~vwdl~~~~~~~~~-~ 274 (347)
... ........++++|.+..|+...+ .+.|...++.. +....+ .
T Consensus 116 l~~--------------------------------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~ 162 (318)
T 3sov_A 116 LFW--------------------------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIIN 162 (318)
T ss_dssp EEC--------------------------------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEEC
T ss_pred EEe--------------------------------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEE
Confidence 100 13345678999987667776664 46788888753 222222 2
Q ss_pred cCCCcEEEEEeCCC-CEEE-EEeCCCcEEEEEcc
Q 043707 275 AHDDAINSVVAGFD-SLVF-TGSADGTVKVWRRE 306 (347)
Q Consensus 275 ~h~~~v~~i~~~~~-~~l~-s~~~dg~I~vwd~~ 306 (347)
..-...+.|+++++ +.|+ +=...+.|..+|+.
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 23345688999985 4444 44567889999986
No 294
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.39 E-value=0.046 Score=52.90 Aligned_cols=170 Identities=13% Similarity=0.138 Sum_probs=93.7
Q ss_pred CCEEEEecCCCcEEEEeCC--CcceeeecCC----CCeeE-EEEeCCCCEEEEEeC------CCcEEEEecCCCCCceee
Q 043707 133 GDLLYTGSDSKNIRVWKNL--KEFSGFKSNS----GLVKA-IIITGDSNKIFTGHQ------DGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~--~~~~~~~~h~----~~V~~-l~~sp~~~~l~s~~~------Dg~I~vwd~~~~~~~~~~ 199 (347)
+..++.++.|+.|+.+|.. +.+..+.... ..+.+ ..+. ++ .++.+.. +|.|+.+|.++++..-..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 5578888889999999854 3333333210 11111 1111 33 5555543 589999999999865443
Q ss_pred eec-cccccc---ceEEeccCCCeEEEEeeccee-eeeecCCCeeEEEEcCCCCEEEEEeCCCc----------------
Q 043707 200 RVG-SLPTFK---DYVKSSVNPKNYVEVRRNRNV-LKIRHYDAVSCLSLNAEQGLLYSGSWDKT---------------- 258 (347)
Q Consensus 200 ~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~s~s~dg~---------------- 258 (347)
... ..+... ..+..... .+..... ....+......+++.++..+++.+..++.
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~------~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~ 268 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAK------TWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLY 268 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHT------TCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred cccCCCCCccccccccccccc------cCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 321 111000 00000000 0000000 00012233345788888888988887763
Q ss_pred ---EEEEeCCCCEEEEEEec--CC-------CcEEEEEeCCCC----EEEEEeCCCcEEEEEcccCCc
Q 043707 259 ---LKVWRISDCKCLESINA--HD-------DAINSVVAGFDS----LVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 259 ---i~vwdl~~~~~~~~~~~--h~-------~~v~~i~~~~~~----~l~s~~~dg~I~vwd~~~~~~ 310 (347)
|..+|.++++.+-.++. |. .+.....+..++ .++.++.+|.++++|.++++.
T Consensus 269 ~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 269 LSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred eeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 99999999999887764 32 222222222244 588899999999999986653
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.97 E-value=0.1 Score=47.55 Aligned_cols=142 Identities=4% Similarity=-0.001 Sum_probs=77.5
Q ss_pred CeeEEEEeCC--CCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeE
Q 043707 163 LVKAIIITGD--SNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSC 240 (347)
Q Consensus 163 ~V~~l~~sp~--~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 240 (347)
....|+|.|+ ...|+.+...+.|+.+|..++...... ........
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~---------------------------------~~~~~P~g 186 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT---------------------------------TNIGQCAD 186 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC---------------------------------CCCSCEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee---------------------------------cCCCCccE
Confidence 3568999984 445666655588888888665421110 13345789
Q ss_pred EEEcCCCCEEEEEeCCC----c-EEEEeCCCCEE-EEEEecCCCcEEEEEeCC-CCEEEEE-eCCCcEEEEEcccCCccc
Q 043707 241 LSLNAEQGLLYSGSWDK----T-LKVWRISDCKC-LESINAHDDAINSVVAGF-DSLVFTG-SADGTVKVWRRELQGKGT 312 (347)
Q Consensus 241 l~~~~~~~~l~s~s~dg----~-i~vwdl~~~~~-~~~~~~h~~~v~~i~~~~-~~~l~s~-~~dg~I~vwd~~~~~~~~ 312 (347)
|+++++++ |+.+...+ . +...+...+.. ...+. .-.....+++++ ++.|+.+ ..++.|+.+|...+...
T Consensus 187 iavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~- 263 (433)
T 4hw6_A 187 VNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT- 263 (433)
T ss_dssp EEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE-
T ss_pred EEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE-
Confidence 99999999 55554322 1 33333221110 01121 223346678888 6755544 46778888887633210
Q ss_pred eeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 313 KHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 313 ~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
..+. .. .....-..|+|+|+++.|+.+.
T Consensus 264 -~~~~-~~-~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 264 -EEEV-MM-DTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp -EEEE-EC-SCCSSCEEEEECTTSSEEEEEE
T ss_pred -EEEe-cc-CCCCCcccEEEeCCCCEEEEEe
Confidence 0011 11 1112234799999998666554
No 296
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.87 E-value=0.44 Score=42.06 Aligned_cols=103 Identities=16% Similarity=0.157 Sum_probs=58.5
Q ss_pred CCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEE
Q 043707 162 GLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCL 241 (347)
Q Consensus 162 ~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 241 (347)
.....|+|.|+|+ |+.+..+|.|+++|. .++ ..+..++. ..........|
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~----~~~~~~~v------------------------~~~g~~g~~gi 78 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISP-SGK----KLVASFDV------------------------ANVGEAGLLGL 78 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECS-SCE----EEEEECCC------------------------CCSTTCSEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCc----eEeeccce------------------------eecCCCceeeE
Confidence 3567999999996 555666799998873 332 11111100 00123457889
Q ss_pred EEcCC---CCEEEEEeC----C----CcEEEEeCCCC-------EEE-EEEec-CCCcEEEEEeCCCCEEEEE
Q 043707 242 SLNAE---QGLLYSGSW----D----KTLKVWRISDC-------KCL-ESINA-HDDAINSVVAGFDSLVFTG 294 (347)
Q Consensus 242 ~~~~~---~~~l~s~s~----d----g~i~vwdl~~~-------~~~-~~~~~-h~~~v~~i~~~~~~~l~s~ 294 (347)
+++|+ +..|+.+.. + ..|..|++... +.+ ..+.. .......|+|.||+.|+.+
T Consensus 79 a~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 79 ALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp EECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred EeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 99997 555555443 2 56777776543 112 22321 1123467899999954444
No 297
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.86 E-value=0.3 Score=43.09 Aligned_cols=29 Identities=17% Similarity=0.378 Sum_probs=22.5
Q ss_pred CeeEEEEeCCCCEEEEEeCCCcEEEEecC
Q 043707 163 LVKAIIITGDSNKIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~ 191 (347)
....|+|.|+|+.|+.+...|.|++++..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG 47 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence 46799999999845566678999988753
No 298
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.83 E-value=1.3 Score=42.05 Aligned_cols=70 Identities=13% Similarity=0.064 Sum_probs=48.0
Q ss_pred EEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCEEEEEEecCCC----------cEEEEEeC-CCC---
Q 043707 240 CLSLNAEQGLLYSGSWD----------------KTLKVWRISDCKCLESINAHDD----------AINSVVAG-FDS--- 289 (347)
Q Consensus 240 ~l~~~~~~~~l~s~s~d----------------g~i~vwdl~~~~~~~~~~~h~~----------~v~~i~~~-~~~--- 289 (347)
.+++.++..+++.+..+ +.|..+|.++++.+-.++.... ++. +... .++
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~ 323 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKAR 323 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEE
Confidence 35566777788888765 3799999999999877764221 121 2221 344
Q ss_pred -EEEEEeCCCcEEEEEcccCCc
Q 043707 290 -LVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 290 -~l~s~~~dg~I~vwd~~~~~~ 310 (347)
.++.++.+|.+.++|.++++.
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEECCCcEEEEEECCCCCE
Confidence 566788999999999986543
No 299
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.83 E-value=0.063 Score=43.85 Aligned_cols=101 Identities=6% Similarity=-0.011 Sum_probs=62.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEE------EEEEe--cCCCcEEEEEeCCCCEEEEEeCCCcEEEEEccc
Q 043707 236 DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKC------LESIN--AHDDAINSVVAGFDSLVFTGSADGTVKVWRREL 307 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~------~~~~~--~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~ 307 (347)
..+..++|+|++.+.++ .+|.++-.+..+.+. -..+- +.. ...++.|.+++.|.++ .||.|.-++..+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 47789999998886666 577766666544111 11111 111 2578899999977777 679888776543
Q ss_pred CCccceeeehhhhhc---cCCcEEEEEEccCCCEEEEe
Q 043707 308 QGKGTKHFLAQVLLK---QENAITALAVNQESAVVYCG 342 (347)
Q Consensus 308 ~~~~~~~~~~~~~~~---h~~~V~~l~~~p~~~~l~sg 342 (347)
.+. ...+-..-.. --..+..|.|.|+|.+-+..
T Consensus 117 ~~~--~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 117 SDT--DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp STT--CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred CCC--CceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 322 1111110111 12468999999999877766
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.77 E-value=0.42 Score=44.19 Aligned_cols=141 Identities=7% Similarity=0.016 Sum_probs=80.3
Q ss_pred EEEEecCCCcEEEEeCCC-cceeeecC----CCCeeEEEE-------eCCCCEEEEEeCCC-c------EEEEecCC-CC
Q 043707 135 LLYTGSDSKNIRVWKNLK-EFSGFKSN----SGLVKAIII-------TGDSNKIFTGHQDG-K------IRIWKVSR-KN 194 (347)
Q Consensus 135 ~l~tg~~dg~I~vwd~~~-~~~~~~~h----~~~V~~l~~-------sp~~~~l~s~~~Dg-~------I~vwd~~~-~~ 194 (347)
++++-...+.|++.|..+ .+..+..- -.....|+| +++++.|+.+...+ . |.+.+... +.
T Consensus 154 Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~ 233 (496)
T 3kya_A 154 LYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGT 233 (496)
T ss_dssp EEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSC
T ss_pred EEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCc
Confidence 444444446788888654 34443322 125889999 99998666666544 2 44554322 11
Q ss_pred Cce-e--eeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCC-CCEEEEEeCCCcEEEEeCC-----
Q 043707 195 PSV-H--KRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAE-QGLLYSGSWDKTLKVWRIS----- 265 (347)
Q Consensus 195 ~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~l~s~s~dg~i~vwdl~----- 265 (347)
... . ..+ . -......++++|+ +.++++-..++.|..+|+.
T Consensus 234 ~~~~~~~~~v----------------------------~---~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~ 282 (496)
T 3kya_A 234 FDDRSDIQLI----------------------------A---AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKT 282 (496)
T ss_dssp CSTTSCEEEE----------------------------E---EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHH
T ss_pred eeecccceee----------------------------c---cCCCceEEEEcCCCCeEEEEECCCCEEEEEeccccccc
Confidence 100 0 000 0 0113346788995 5555556667889999987
Q ss_pred --CCEE-----------EEE-Eec-CCCcEEEEEeCCCC-EEE-EEeCCCcEEEEEcc
Q 043707 266 --DCKC-----------LES-INA-HDDAINSVVAGFDS-LVF-TGSADGTVKVWRRE 306 (347)
Q Consensus 266 --~~~~-----------~~~-~~~-h~~~v~~i~~~~~~-~l~-s~~~dg~I~vwd~~ 306 (347)
++.. ... +.. .......|+|+|++ .|+ +-.....|+.++..
T Consensus 283 ~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 283 IKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp HHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 4443 122 221 23446789999998 444 44567788887654
No 301
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.74 E-value=0.91 Score=41.53 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=22.8
Q ss_pred CCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCC
Q 043707 162 GLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKN 194 (347)
Q Consensus 162 ~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~ 194 (347)
...+.|+|.|+|+++++-...+.|++++..++.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 356799999999766665444578888765443
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.59 E-value=0.37 Score=44.55 Aligned_cols=150 Identities=9% Similarity=0.033 Sum_probs=83.6
Q ss_pred CeeEEEEeC-CCCEEEEEeC-CCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeE
Q 043707 163 LVKAIIITG-DSNKIFTGHQ-DGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSC 240 (347)
Q Consensus 163 ~V~~l~~sp-~~~~l~s~~~-Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 240 (347)
....|+|.| +...|+.+.. .+.|++.|+..+.......... ........
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~-----------------------------~~~~~p~~ 190 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT-----------------------------IPTNRIRS 190 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT-----------------------------SSCSBEEE
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc-----------------------------cccCCCcE
Confidence 356899998 3555555554 3668888877664322111100 02235788
Q ss_pred EEE-------cCCCCEEEEEeCCC-c------EEEEeCCC-CEEE-----EEEecCCCcEEEEEeCCC-C-EEEEEeCCC
Q 043707 241 LSL-------NAEQGLLYSGSWDK-T------LKVWRISD-CKCL-----ESINAHDDAINSVVAGFD-S-LVFTGSADG 298 (347)
Q Consensus 241 l~~-------~~~~~~l~s~s~dg-~------i~vwdl~~-~~~~-----~~~~~h~~~v~~i~~~~~-~-~l~s~~~dg 298 (347)
|+| ++++..|+.+...+ . +.+++... ++.. ..+.... ....++.+|+ + ++++-..++
T Consensus 191 ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g 269 (496)
T 3kya_A 191 IAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKG 269 (496)
T ss_dssp EEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTT
T ss_pred EEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCC
Confidence 999 99999777776654 2 56665332 1111 1222112 2346678884 5 555666788
Q ss_pred cEEEEEcc-------cCCccce--------eeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 299 TVKVWRRE-------LQGKGTK--------HFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 299 ~I~vwd~~-------~~~~~~~--------~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
.|..+|+. ....... ...+... ........|+|+|++++|+.+-
T Consensus 270 ~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 270 QVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp EEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEE
T ss_pred EEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEe
Confidence 89999987 2221000 0000111 1234568999999999665553
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.58 E-value=1.1 Score=39.46 Aligned_cols=105 Identities=9% Similarity=0.091 Sum_probs=58.9
Q ss_pred CCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEE
Q 043707 162 GLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCL 241 (347)
Q Consensus 162 ~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 241 (347)
...+.|+|.|+|+++++--..|.|++++...++......+ +. +..........|
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~---~~-----------------------v~~~g~~GllGi 85 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEV---PG-----------------------VSPSGEGGLLGI 85 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC---TT-----------------------CCCBTTBSEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeeccc---Cc-----------------------eeecCCCCceee
Confidence 3467999999998766665589999887655432111111 00 001234567889
Q ss_pred EEcCC---CCEEEEE-e--CCCcEEEEeCCC----------CEEEE-EEe-cCCCcEEEEEeCCCCEEE
Q 043707 242 SLNAE---QGLLYSG-S--WDKTLKVWRISD----------CKCLE-SIN-AHDDAINSVVAGFDSLVF 292 (347)
Q Consensus 242 ~~~~~---~~~l~s~-s--~dg~i~vwdl~~----------~~~~~-~~~-~h~~~v~~i~~~~~~~l~ 292 (347)
+++|+ ...|+.. + .++.|.-|.+.. .+.+. .+. .....-..|+|.||+.|+
T Consensus 86 a~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Ly 154 (347)
T 3das_A 86 ALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLY 154 (347)
T ss_dssp EECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEE
T ss_pred EeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEE
Confidence 99995 3445443 2 345566665543 12222 232 112234678999999443
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.51 E-value=1.2 Score=42.44 Aligned_cols=165 Identities=8% Similarity=-0.009 Sum_probs=90.9
Q ss_pred CCcEEEEeCCCc---ceeeecCCCCeeEEEEeCCCCEEEEEe-CCCcEEEEecCCCCCceeeeecccccccceEEeccCC
Q 043707 142 SKNIRVWKNLKE---FSGFKSNSGLVKAIIITGDSNKIFTGH-QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNP 217 (347)
Q Consensus 142 dg~I~vwd~~~~---~~~~~~h~~~V~~l~~sp~~~~l~s~~-~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (347)
...|+..++... .......-..+.+|+|++.+..|+.+. ..+.|..++++....... .+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~-v~~--------------- 80 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQN-VVV--------------- 80 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEE-EEC---------------
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEE-EEe---------------
Confidence 456777775432 222223334578999999665665554 457788888765421110 000
Q ss_pred CeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEE-eCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEe
Q 043707 218 KNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSG-SWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGS 295 (347)
Q Consensus 218 ~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~-s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~ 295 (347)
........|++.+.++.|+.+ ...+.|.+.++........+...-.....|++.|. +.|+...
T Consensus 81 ---------------~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 81 ---------------SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp ---------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEE
T ss_pred ---------------CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEec
Confidence 122457789999865555554 45788999998654322222233445678899885 5555544
Q ss_pred C--CCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 296 A--DGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 296 ~--dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
. .+.|...++..... . .+. ...-.....|+++++++.|+.+-
T Consensus 146 ~g~~~~I~r~~~dG~~~--~-~l~---~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 146 WGEVPKIERAGMDGSSR--F-III---NSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp CSSSCEEEEEETTSCSC--E-EEE---CSSCSSEEEEEEETTTTEEEEEE
T ss_pred cCCCCEEEEEECCCCce--E-EEE---eCCCCCCcEEEEEccCCEEEEEe
Confidence 3 45666666542111 1 111 11234678999999877776653
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.47 E-value=0.36 Score=42.57 Aligned_cols=106 Identities=8% Similarity=0.096 Sum_probs=61.7
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEE--EEEEe---cCCCcEEEEEeCCC----CEEEEEeC-C-----Cc
Q 043707 235 YDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKC--LESIN---AHDDAINSVVAGFD----SLVFTGSA-D-----GT 299 (347)
Q Consensus 235 ~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~--~~~~~---~h~~~v~~i~~~~~----~~l~s~~~-d-----g~ 299 (347)
-.....|+|.|++++++ +..+|.|++++ +++. +..+. ........|+++|+ +.|+.+.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 34567899999998555 45679999998 4442 22222 12356789999998 55554433 2 56
Q ss_pred EEEEEcccCCccceeeehhhhh---ccCCcEEEEEEccCCCEEEEec
Q 043707 300 VKVWRRELQGKGTKHFLAQVLL---KQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 300 I~vwd~~~~~~~~~~~~~~~~~---~h~~~V~~l~~~p~~~~l~sgs 343 (347)
|..|+...........+...+. ........|+|.|+|.+.++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 7777765221101111222122 1112336899999997666644
No 306
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.36 E-value=0.054 Score=52.71 Aligned_cols=165 Identities=13% Similarity=0.071 Sum_probs=87.3
Q ss_pred CCcEEEEeCCCc-ceeeecCCCCeeEEEEeCCCCEEEEEe-CCCcEEEEecCCCCC--ceeeeecccccccceEEeccCC
Q 043707 142 SKNIRVWKNLKE-FSGFKSNSGLVKAIIITGDSNKIFTGH-QDGKIRIWKVSRKNP--SVHKRVGSLPTFKDYVKSSVNP 217 (347)
Q Consensus 142 dg~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~~~~l~s~~-~Dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 217 (347)
.+.|++.+.... ...+......+.+|+|.+.+..|+.+. ..+.|+.+++..... .....+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~--------------- 449 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--------------- 449 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC---------------
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe---------------
Confidence 356777765432 222222234577899998666666554 557888888875210 0000000
Q ss_pred CeEEEEeecceeeeeecCCCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEe
Q 043707 218 KNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ-GLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGS 295 (347)
Q Consensus 218 ~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~ 295 (347)
........|++.+.+ +++++-...+.|.++++........+.........|++.|. ++|+.+.
T Consensus 450 ---------------~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td 514 (699)
T 1n7d_A 450 ---------------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTD 514 (699)
T ss_dssp ---------------SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECC
T ss_pred ---------------CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcc
Confidence 011234457787544 44444455788999998755433333322344677888885 4444443
Q ss_pred C--CCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEe
Q 043707 296 A--DGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCG 342 (347)
Q Consensus 296 ~--dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sg 342 (347)
. .+.|.++++..... . .+. .........|+|+|+++.|+.+
T Consensus 515 ~~~~~~I~~~~~dG~~~--~-~l~---~~~l~~PnGlavd~~~~~LY~a 557 (699)
T 1n7d_A 515 WGTPAKIKKGGLNGVDI--Y-SLV---TENIQWPNGITLDLLSGRLYWV 557 (699)
T ss_dssp CSSSCCEEBCCSSSCCC--C-EES---CSSCSSCCCEEECTTTCCEEEE
T ss_pred cCCCCeEEEEeCCCCCe--e-EEE---eCCCCCccEEEEeccCCEEEEE
Confidence 2 36777777652211 0 111 1122356788999876655544
No 307
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.32 E-value=2.1 Score=40.92 Aligned_cols=164 Identities=9% Similarity=0.015 Sum_probs=95.2
Q ss_pred CCCcEEEEeCCCc-cee-ee-cCCCCeeEEEEeCCCCEEE-EEeCCCcEEEEecCCCCCceeeeecccccccceEEeccC
Q 043707 141 DSKNIRVWKNLKE-FSG-FK-SNSGLVKAIIITGDSNKIF-TGHQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVN 216 (347)
Q Consensus 141 ~dg~I~vwd~~~~-~~~-~~-~h~~~V~~l~~sp~~~~l~-s~~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (347)
....|+..++... ... +. ..-..+.+|+|.+.+..|+ +-..++.|+.++++.........
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~---------------- 76 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE---------------- 76 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----------------
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe----------------
Confidence 3456777775432 111 11 1224678999999655555 44567888888887543211110
Q ss_pred CCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEE-eCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEE
Q 043707 217 PKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSG-SWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTG 294 (347)
Q Consensus 217 ~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~-s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~ 294 (347)
........|++.+.+..|+.+ ...+.|.+.++........+...-.....|++.|. +.|+..
T Consensus 77 ----------------~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 77 ----------------FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWT 140 (628)
T ss_dssp ----------------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEE
T ss_pred ----------------CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEe
Confidence 012345678888765555444 45678999998644322222233445789999984 665555
Q ss_pred e--CCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 295 S--ADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 295 ~--~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
. ..+.|...++..... ..+.........|+++++++.|+.+-
T Consensus 141 D~g~~~~I~r~~~dG~~~-------~~l~~~~~~P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 141 EWGGKPKIDRAAMDGSER-------TTLVPNVGRANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp ECSSSCEEEEEETTSCSC-------EEEECSCSSEEEEEEETTTTEEEEEE
T ss_pred CCCCCCEEEEEeCCCCce-------EEEECCCCCcceEEEccccCEEEEEE
Confidence 4 356777777652221 11112345678999999877776654
No 308
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.29 E-value=0.094 Score=51.03 Aligned_cols=141 Identities=11% Similarity=0.119 Sum_probs=78.1
Q ss_pred CCEEEEe-cCCCcEEEEeCCC-----cceee-ecCCCCeeEEEEeCC-CCEEEEEeCCCcEEEEecCCCCCceeeeeccc
Q 043707 133 GDLLYTG-SDSKNIRVWKNLK-----EFSGF-KSNSGLVKAIIITGD-SNKIFTGHQDGKIRIWKVSRKNPSVHKRVGSL 204 (347)
Q Consensus 133 ~~~l~tg-~~dg~I~vwd~~~-----~~~~~-~~h~~~V~~l~~sp~-~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~~ 204 (347)
+..|+.. ...+.|+.++... ....+ ...-.....|++.+. ++++++-...+.|.+.++..........
T Consensus 417 ~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~---- 492 (699)
T 1n7d_A 417 SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---- 492 (699)
T ss_dssp TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECC----
T ss_pred cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEe----
Confidence 4445444 4557888887543 11111 111224567888764 4444454566788888876543111100
Q ss_pred ccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC--CcEEEEeCCCCEEEEEE-ecCCCcEE
Q 043707 205 PTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD--KTLKVWRISDCKCLESI-NAHDDAIN 281 (347)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d--g~i~vwdl~~~~~~~~~-~~h~~~v~ 281 (347)
........|+++|.+..|+..... +.|.++++... ....+ ...-...+
T Consensus 493 ----------------------------~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 493 ----------------------------EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPN 543 (699)
T ss_dssp ----------------------------CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSCC
T ss_pred ----------------------------CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCcc
Confidence 012334678888876656555432 67877777532 22222 22233467
Q ss_pred EEEeCCCC--EEEEEeCCCcEEEEEcc
Q 043707 282 SVVAGFDS--LVFTGSADGTVKVWRRE 306 (347)
Q Consensus 282 ~i~~~~~~--~l~s~~~dg~I~vwd~~ 306 (347)
.|++++++ ++++-...+.|.++++.
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccC
Confidence 88999864 44555567889999886
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.29 E-value=0.58 Score=41.27 Aligned_cols=147 Identities=14% Similarity=0.134 Sum_probs=76.5
Q ss_pred CeeEEEEeCCCCEEEEEe------------CCCcEEEEecCCCCCcee-eeeccc-ccccceEEeccCCCeEEEEeecce
Q 043707 163 LVKAIIITGDSNKIFTGH------------QDGKIRIWKVSRKNPSVH-KRVGSL-PTFKDYVKSSVNPKNYVEVRRNRN 228 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~------------~Dg~I~vwd~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 228 (347)
...+|++.|+|..+++++ .+|.|.++|.++...... ..+... ..
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~---------------------- 108 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLD---------------------- 108 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCC----------------------
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCC----------------------
Confidence 456778888875544442 689999999875322111 111000 00
Q ss_pred eeeeecCCCeeEEEEcC--CCC-EEEEE-eC--CCcEEEEeCCCC----EEEEEEecC-CCcEEEEEeCCCCEEEEEeC-
Q 043707 229 VLKIRHYDAVSCLSLNA--EQG-LLYSG-SW--DKTLKVWRISDC----KCLESINAH-DDAINSVVAGFDSLVFTGSA- 296 (347)
Q Consensus 229 ~~~~~h~~~V~~l~~~~--~~~-~l~s~-s~--dg~i~vwdl~~~----~~~~~~~~h-~~~v~~i~~~~~~~l~s~~~- 296 (347)
........|.+.+ ++. +|+.+ .. +.+|.+|++... ..+..+.+. -...+.+.+.++|.++.+..
T Consensus 109 ----~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~ 184 (355)
T 3sre_A 109 ----ISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDH 184 (355)
T ss_dssp ----GGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESC
T ss_pred ----cCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCc
Confidence 0122344455544 333 34333 22 467778776542 223344322 24578899988885544432
Q ss_pred -----------------CCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEecC
Q 043707 297 -----------------DGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 297 -----------------dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.|.|.-+|.. + ...+...-...+.|+|+||++.|+.+..
T Consensus 185 ~ftd~~~~~~e~~~~~~~g~vyr~d~~---~------~~~~~~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 185 YFIDPYLKSWEMHLGLAWSFVTYYSPN---D------VRVVAEGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp SCSSHHHHHHHHHTTCCCEEEEEECTT---C------CEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred EeCCcccccchhhccCCccEEEEEECC---e------EEEeecCCcccCcceECCCCCEEEEEeC
Confidence 1334333331 1 1122222345789999999998887653
No 310
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.73 E-value=1.1 Score=39.43 Aligned_cols=111 Identities=10% Similarity=0.052 Sum_probs=66.4
Q ss_pred cCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEE--EEEE----ecCCCcEEEEEeCCC----CEEEEE---eCCCcE
Q 043707 234 HYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKC--LESI----NAHDDAINSVVAGFD----SLVFTG---SADGTV 300 (347)
Q Consensus 234 h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~--~~~~----~~h~~~v~~i~~~~~----~~l~s~---~~dg~I 300 (347)
.-...+.|+|.|++.++++--..|.|++++...++. +..+ .........|+++|+ +.|+.. ..++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 455678999999999777765589999998765543 2222 123556889999995 544432 345556
Q ss_pred EEEEcccCC----c-cceeeehhhhh-ccCCcEEEEEEccCCCEEEEecC
Q 043707 301 KVWRRELQG----K-GTKHFLAQVLL-KQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 301 ~vwd~~~~~----~-~~~~~~~~~~~-~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
.-|.+.... . .....++..+. .....-..|+|.|||.+.++.+.
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 556554311 1 01111111121 11223467999999987777654
No 311
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.60 E-value=2.2 Score=37.45 Aligned_cols=137 Identities=11% Similarity=0.251 Sum_probs=87.0
Q ss_pred CCcEEEEeCC---Ccceeeec------CC-CCeeEEEE--eCC-CC-EEEEEeCCCcEEEEecCCCCC--ceeeeecccc
Q 043707 142 SKNIRVWKNL---KEFSGFKS------NS-GLVKAIII--TGD-SN-KIFTGHQDGKIRIWKVSRKNP--SVHKRVGSLP 205 (347)
Q Consensus 142 dg~I~vwd~~---~~~~~~~~------h~-~~V~~l~~--sp~-~~-~l~s~~~Dg~I~vwd~~~~~~--~~~~~~~~~~ 205 (347)
+.+|.+|++. ..+..+.. .. ..+..+++ +|. +. +++....+|.+..|++..... ...+.+.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR--- 174 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVR--- 174 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEE---
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEE---
Confidence 5789999642 23333311 11 56777888 774 43 688888999999999854211 1111111
Q ss_pred cccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC-----CCEEEEEEe-cC-CC
Q 043707 206 TFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRIS-----DCKCLESIN-AH-DD 278 (347)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~-----~~~~~~~~~-~h-~~ 278 (347)
.+.-...+..+...+....|+.+-++..|..++.+ +++.+..+. .+ ..
T Consensus 175 -------------------------~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~a 229 (355)
T 3amr_A 175 -------------------------AFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTR 229 (355)
T ss_dssp -------------------------EEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCS
T ss_pred -------------------------EecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCcccc
Confidence 11234567888899988999999999776666754 355665553 22 23
Q ss_pred cEEEEEe--CCC--CEEEEEe-CCCcEEEEEcc
Q 043707 279 AINSVVA--GFD--SLVFTGS-ADGTVKVWRRE 306 (347)
Q Consensus 279 ~v~~i~~--~~~--~~l~s~~-~dg~I~vwd~~ 306 (347)
.+..|++ .++ ++|++++ .++++.|||++
T Consensus 230 DvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 230 DIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp CEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 5777766 443 3566555 67899999996
No 312
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.46 E-value=4.3 Score=41.83 Aligned_cols=73 Identities=16% Similarity=0.277 Sum_probs=51.0
Q ss_pred cCCCeeEEEEcCC------CCEEEEEeC-CCcEEEEeCCCCEEEEEEecC-CCcEEEEEeCC-CC--EEEEEeCCCcEEE
Q 043707 234 HYDAVSCLSLNAE------QGLLYSGSW-DKTLKVWRISDCKCLESINAH-DDAINSVVAGF-DS--LVFTGSADGTVKV 302 (347)
Q Consensus 234 h~~~V~~l~~~~~------~~~l~s~s~-dg~i~vwdl~~~~~~~~~~~h-~~~v~~i~~~~-~~--~l~s~~~dg~I~v 302 (347)
-...|.|+++.+. +.+++.|.+ |++++|+++.+.+.+....-. .....++.+.. ++ +|..|-.||.+.-
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 3567999998763 479999998 999999999987776544321 12334443321 23 8889999999877
Q ss_pred EEcc
Q 043707 303 WRRE 306 (347)
Q Consensus 303 wd~~ 306 (347)
+.+.
T Consensus 632 ~~~d 635 (1158)
T 3ei3_A 632 FGLN 635 (1158)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7654
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.43 E-value=1.5 Score=40.17 Aligned_cols=110 Identities=5% Similarity=0.052 Sum_probs=63.6
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEE--EEEEec------CCCcEEEEEeCC----CCEEEEEeC------
Q 043707 235 YDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKC--LESINA------HDDAINSVVAGF----DSLVFTGSA------ 296 (347)
Q Consensus 235 ~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~--~~~~~~------h~~~v~~i~~~~----~~~l~s~~~------ 296 (347)
-...+.|+|.|+++++++-...+.|++++..+++. +..+.. .+..+..|+++| ++.|+.+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 44667999999998777655445798888765543 233321 245677999999 454444332
Q ss_pred -------CCcEEEEEcccCCc--cceeeehhhhh-ccCCcEEEEEEccCCCEEEEecC
Q 043707 297 -------DGTVKVWRRELQGK--GTKHFLAQVLL-KQENAITALAVNQESAVVYCGSS 344 (347)
Q Consensus 297 -------dg~I~vwd~~~~~~--~~~~~~~~~~~-~h~~~V~~l~~~p~~~~l~sgs~ 344 (347)
...|.-|+...... .....++..+. ........|+|.|||.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 23455555432111 01111221121 11235789999999987777654
No 314
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.41 E-value=3.6 Score=39.21 Aligned_cols=149 Identities=11% Similarity=0.137 Sum_probs=86.0
Q ss_pred EEEEeec--CCEEE-EecCCCcEEEEeCCCc--ce-eeecCCCCeeEEEEeCCCCEE-EEEeCCCcEEEEecCCCCCcee
Q 043707 126 IYSLAAS--GDLLY-TGSDSKNIRVWKNLKE--FS-GFKSNSGLVKAIIITGDSNKI-FTGHQDGKIRIWKVSRKNPSVH 198 (347)
Q Consensus 126 V~~l~~~--~~~l~-tg~~dg~I~vwd~~~~--~~-~~~~h~~~V~~l~~sp~~~~l-~s~~~Dg~I~vwd~~~~~~~~~ 198 (347)
..+++++ ++.|+ +-...+.|+.++.... .. .+..--.....|++.+.+..| ++-...+.|.+.+++.......
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l 121 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVL 121 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEE
Confidence 3455443 44444 4445677888775432 12 222222568899999955544 4455678899999876532111
Q ss_pred eeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCC--CcEEEEeCCCCEEEEEEecC
Q 043707 199 KRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWD--KTLKVWRISDCKCLESINAH 276 (347)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~d--g~i~vwdl~~~~~~~~~~~h 276 (347)
.. ........|+++|.+..|+...+. +.|...++............
T Consensus 122 ~~--------------------------------~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~ 169 (619)
T 3s94_A 122 FW--------------------------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE 169 (619)
T ss_dssp EC--------------------------------SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS
T ss_pred Ee--------------------------------CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC
Confidence 10 123446679999987777766653 56666666432222222233
Q ss_pred CCcEEEEEeCCC-CEEE-EEeCCCcEEEEEcc
Q 043707 277 DDAINSVVAGFD-SLVF-TGSADGTVKVWRRE 306 (347)
Q Consensus 277 ~~~v~~i~~~~~-~~l~-s~~~dg~I~vwd~~ 306 (347)
-...+.|++.++ +.|+ +=...+.|..+|+.
T Consensus 170 ~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 170 IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred CCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 456788999875 4444 44556788888886
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.23 E-value=2.2 Score=36.14 Aligned_cols=83 Identities=14% Similarity=0.147 Sum_probs=39.9
Q ss_pred CcEEEEeCCCCEEEE--EEecCCCcEEEEEeCCCCEEEEEeCC-----CcEEEEEcccCCccceeeehhhhhccCCcEEE
Q 043707 257 KTLKVWRISDCKCLE--SINAHDDAINSVVAGFDSLVFTGSAD-----GTVKVWRRELQGKGTKHFLAQVLLKQENAITA 329 (347)
Q Consensus 257 g~i~vwdl~~~~~~~--~~~~h~~~v~~i~~~~~~~l~s~~~d-----g~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~ 329 (347)
..+.+||+.+.+-.. .+......-..+.+ .+.+++.|+.+ ..+.+||+... ....+..+.........
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~----~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLN----EWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTT----EEEECCCCSCCBSCCEE
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCC----cEEECCCCCCCccceeE
Confidence 458899988764322 12111111122222 33356666543 46788888643 22222222222222233
Q ss_pred EEEccCCCEEEEecCCC
Q 043707 330 LAVNQESAVVYCGSSDG 346 (347)
Q Consensus 330 l~~~p~~~~l~sgs~DG 346 (347)
+.+ ++++++.|+.++
T Consensus 244 ~~~--~~~i~v~GG~~~ 258 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQG 258 (306)
T ss_dssp EEE--TTEEEEEECBCS
T ss_pred EEE--CCEEEEEeCcCC
Confidence 333 667888887654
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.89 E-value=2.6 Score=35.60 Aligned_cols=94 Identities=10% Similarity=0.155 Sum_probs=46.1
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCEEEEE--EecCCCcEEEEEeCCCCEEEEEeCC-----CcEEEEEcccCCccce
Q 043707 246 EQGLLYSGSWD-----KTLKVWRISDCKCLES--INAHDDAINSVVAGFDSLVFTGSAD-----GTVKVWRRELQGKGTK 313 (347)
Q Consensus 246 ~~~~l~s~s~d-----g~i~vwdl~~~~~~~~--~~~h~~~v~~i~~~~~~~l~s~~~d-----g~I~vwd~~~~~~~~~ 313 (347)
++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ .+.+++.|+.+ ..|.+||+....
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~---- 233 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDS---- 233 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE----
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCc----
Confidence 45666666543 4588999877643222 2111111222233 23366666654 468889886432
Q ss_pred eeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 314 HFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 314 ~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
...+..+.........+.+ ++++++.|+.++
T Consensus 234 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 264 (301)
T 2vpj_A 234 WTTVTSMTTPRCYVGATVL--RGRLYAIAGYDG 264 (301)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEECCCCCCcccceeEEEE--CCEEEEEcCcCC
Confidence 2222222211112222222 567777777654
No 317
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.28 E-value=3.3 Score=34.96 Aligned_cols=94 Identities=16% Similarity=0.168 Sum_probs=44.6
Q ss_pred CCCEEEEEeCC-------CcEEEEeCCCCEEEE--EEecCCCcEEEEEeCCCCEEEEEeCC-----CcEEEEEcccCCcc
Q 043707 246 EQGLLYSGSWD-------KTLKVWRISDCKCLE--SINAHDDAINSVVAGFDSLVFTGSAD-----GTVKVWRRELQGKG 311 (347)
Q Consensus 246 ~~~~l~s~s~d-------g~i~vwdl~~~~~~~--~~~~h~~~v~~i~~~~~~~l~s~~~d-----g~I~vwd~~~~~~~ 311 (347)
++.+++.|+.+ ..+.+||+.+.+-.. .+.........+.+ .+.+++.|+.+ ..+.+||+....
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~-- 231 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNA-- 231 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTE--
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCC--
Confidence 44555555432 358899988764322 22211111222232 33466666654 468888886431
Q ss_pred ceeeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 312 TKHFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 312 ~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
...+..+.........+.+ ++++++.|+.++
T Consensus 232 --W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~ 262 (302)
T 2xn4_A 232 --WRQVADMNMCRRNAGVCAV--NGLLYVVGGDDG 262 (302)
T ss_dssp --EEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred --EeeCCCCCCccccCeEEEE--CCEEEEECCcCC
Confidence 2222222111111112222 567778887654
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.97 E-value=3.8 Score=34.79 Aligned_cols=94 Identities=14% Similarity=0.208 Sum_probs=45.8
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCEEEE--EEecCCCcEEEEEeCCCCEEEEEeCC-----CcEEEEEcccCCccce
Q 043707 246 EQGLLYSGSWD-----KTLKVWRISDCKCLE--SINAHDDAINSVVAGFDSLVFTGSAD-----GTVKVWRRELQGKGTK 313 (347)
Q Consensus 246 ~~~~l~s~s~d-----g~i~vwdl~~~~~~~--~~~~h~~~v~~i~~~~~~~l~s~~~d-----g~I~vwd~~~~~~~~~ 313 (347)
++.+++.|+.+ ..+.+||+.+.+-.. .+......-..+.+ .+.+++.|+.+ ..+.+||+... .
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~----~ 242 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE----T 242 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT----E
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC----c
Confidence 45566666543 458899987764321 12111111222333 33366666654 56888988643 2
Q ss_pred eeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 314 HFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 314 ~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
...+..+.........+.+ ++++++.|+.++
T Consensus 243 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 273 (308)
T 1zgk_A 243 WTFVAPMKHRRSALGITVH--QGRIYVLGGYDG 273 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEECCCCCCCccceEEEEE--CCEEEEEcCcCC
Confidence 2222222211112222222 567777777654
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.95 E-value=3.7 Score=34.60 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=44.7
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCEE--EEEEecCCCcEEEEEeCCCCEEEEEeCC-----CcEEEEEcccCCccce
Q 043707 246 EQGLLYSGSWD-----KTLKVWRISDCKC--LESINAHDDAINSVVAGFDSLVFTGSAD-----GTVKVWRRELQGKGTK 313 (347)
Q Consensus 246 ~~~~l~s~s~d-----g~i~vwdl~~~~~--~~~~~~h~~~v~~i~~~~~~~l~s~~~d-----g~I~vwd~~~~~~~~~ 313 (347)
++.+++.|+.+ ..+.+||+.+.+- +..+......-..+.+ .+.+++.|+.+ ..+.+||+.+..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~---- 186 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGH---- 186 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTE----
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCc----
Confidence 45566666543 3588899877653 3322221112222222 23355566654 468888876432
Q ss_pred eeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 314 HFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 314 ~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
...+..+.........+.+ ++++++.|+.++
T Consensus 187 W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 217 (301)
T 2vpj_A 187 WTNVTPMATKRSGAGVALL--NDHIYVVGGFDG 217 (301)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEeCCCCCcccccceEEEE--CCEEEEEeCCCC
Confidence 1222222111111222222 567777777654
No 320
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.60 E-value=4.8 Score=34.99 Aligned_cols=167 Identities=11% Similarity=0.127 Sum_probs=97.4
Q ss_pred ceeEeeeeccc----cEEEEe--ecCCEEEEec-------CCCcEEEEeCCCc-ceeeecCCCCeeEEEEeCC--CC-EE
Q 043707 114 GLIGSIVRKEG----HIYSLA--ASGDLLYTGS-------DSKNIRVWKNLKE-FSGFKSNSGLVKAIIITGD--SN-KI 176 (347)
Q Consensus 114 ~~i~~l~~h~~----~V~~l~--~~~~~l~tg~-------~dg~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~--~~-~l 176 (347)
.+++.+..|.. .|.... .+.++++..+ -.|.+.+|...+. .+.+.+|.+.-..+.+..+ .. .|
T Consensus 138 ~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf 217 (365)
T 2xzh_A 138 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLF 217 (365)
T ss_dssp CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEE
T ss_pred CCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEE
Confidence 34555555542 344444 3455444322 2478889987655 4567777554433333211 11 23
Q ss_pred EEEeC---CCcEEEEecCCC---CCceee---eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCC
Q 043707 177 FTGHQ---DGKIRIWKVSRK---NPSVHK---RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ 247 (347)
Q Consensus 177 ~s~~~---Dg~I~vwd~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~ 247 (347)
+.+.. .++++|-++... .....+ .+...|. ...+---++..++..
T Consensus 218 ~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe--------------------------a~~DFPVamqvs~ky 271 (365)
T 2xzh_A 218 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE--------------------------AQNDFPVAMQISEKH 271 (365)
T ss_dssp EEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT--------------------------CTTCCEEEEEEETTT
T ss_pred EEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc--------------------------ccCCceEEEEecccC
Confidence 33332 258899988543 111111 1111110 134445678889988
Q ss_pred CEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEeCCCcEEEEEcc
Q 043707 248 GLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGSADGTVKVWRRE 306 (347)
Q Consensus 248 ~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~~dg~I~vwd~~ 306 (347)
..++.-+.-|.|++||+.++.++..-+--.+.|-.-+.... +=++.....|.|.--.++
T Consensus 272 gviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 272 DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEEC
T ss_pred CEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEEC
Confidence 89999999999999999999999888776777755544332 344455588887766665
No 321
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.01 E-value=8.7 Score=36.63 Aligned_cols=183 Identities=9% Similarity=0.027 Sum_probs=98.4
Q ss_pred cEEEEeec--CC-EEEEecCCCcEEEEeCCCc-ceeeec-CCCCeeEEEEeCCCCEE-EEEeCCCcEEEEecCCCCCcee
Q 043707 125 HIYSLAAS--GD-LLYTGSDSKNIRVWKNLKE-FSGFKS-NSGLVKAIIITGDSNKI-FTGHQDGKIRIWKVSRKNPSVH 198 (347)
Q Consensus 125 ~V~~l~~~--~~-~l~tg~~dg~I~vwd~~~~-~~~~~~-h~~~V~~l~~sp~~~~l-~s~~~Dg~I~vwd~~~~~~~~~ 198 (347)
...+++++ ++ ++++-..++.|+.++.... ...+.. -......|++.+.+..| ++-...+.|.+.+++.......
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE
Confidence 34455554 34 4555566788888875432 222222 22457889998755554 4445567899999876542211
Q ss_pred eeecccccccceEEeccCCCeEEEEee------------cceeeeeecCCCeeEEEEcCCCCEEEEEe-CCCcEEEEeCC
Q 043707 199 KRVGSLPTFKDYVKSSVNPKNYVEVRR------------NRNVLKIRHYDAVSCLSLNAEQGLLYSGS-WDKTLKVWRIS 265 (347)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~h~~~V~~l~~~~~~~~l~s~s-~dg~i~vwdl~ 265 (347)
. ...+.....+......+..++..+. ...............|++++++..|+.+. ..+.|...|+.
T Consensus 118 ~-~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 118 V-WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp E-CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred E-eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 1 1111111122221112222222111 11122223445678899999877666665 46789999986
Q ss_pred CCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCC
Q 043707 266 DCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 266 ~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~ 309 (347)
.... ..+...-.....|++..+.++++-...+.|...|..++.
T Consensus 197 G~~~-~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 197 GLNR-EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp SCSC-EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCce-EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 4332 233333334557777554455555568888888875543
No 322
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=91.86 E-value=9.9 Score=36.96 Aligned_cols=182 Identities=16% Similarity=0.207 Sum_probs=97.5
Q ss_pred EEEEeecCCEEEEecCCCcEEEEeCCC-cceeee-----cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee
Q 043707 126 IYSLAASGDLLYTGSDSKNIRVWKNLK-EFSGFK-----SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 126 V~~l~~~~~~l~tg~~dg~I~vwd~~~-~~~~~~-----~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~ 199 (347)
|.++......|..|+.+ -|..++... .+..+. .....|.++....++...+ |..+| |..++..+++....
T Consensus 105 i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~- 180 (758)
T 3ott_A 105 VRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGI- 180 (758)
T ss_dssp EEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEE-
T ss_pred EEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEe-
Confidence 55554444455556655 577787542 222221 1134688888877775544 55544 66677655431100
Q ss_pred eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCc
Q 043707 200 RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDA 279 (347)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~ 279 (347)
. .+... ......|.++....++..|..|+. +-+..+|..+++...........
T Consensus 181 ~---~~~~~-----------------------~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~ 233 (758)
T 3ott_A 181 P---LPVHS-----------------------SQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNS 233 (758)
T ss_dssp C---CCCCT-----------------------TCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEE
T ss_pred c---CCCcc-----------------------ccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCe
Confidence 0 00000 001234788888777776666664 46888998776543221112345
Q ss_pred EEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhh---hhccCCcEEEEEEccCCCEEEE
Q 043707 280 INSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQV---LLKQENAITALAVNQESAVVYC 341 (347)
Q Consensus 280 v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~---~~~h~~~V~~l~~~p~~~~l~s 341 (347)
|.++....++.|..|..+ -|.+++...... ....... ..-....|.++....+|.+-+.
T Consensus 234 i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiG 295 (758)
T 3ott_A 234 IKSLALDGNGDLLAGTDN-GLYVYHNDTTPL--QHIIHDSRNIQSLTNNIIWNIFADQEHNIWLG 295 (758)
T ss_dssp EEEEEECTTCCEEEEETT-EEEEECCTTSCC--EEECCCTTCTTSCSCSCEEEEEECTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEeCC-ceeEEecCCCcE--EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEE
Confidence 888888878866667654 577787653221 1110000 0112346889988887765443
No 323
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.18 E-value=7.6 Score=39.08 Aligned_cols=39 Identities=26% Similarity=0.382 Sum_probs=33.8
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEe
Q 043707 236 DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESIN 274 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~ 274 (347)
..+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 356777788888999999999999999999999988753
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.94 E-value=9.2 Score=33.26 Aligned_cols=95 Identities=13% Similarity=0.093 Sum_probs=67.0
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhh
Q 043707 241 LSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVL 320 (347)
Q Consensus 241 l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~ 320 (347)
.-.+|..+.|+.-. ..++.|+|+++.+.++.+.-. ..|.--.|-.+..|+-.+ +..|+-|+++.... +.+.+
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkWis~~~L~lVT-~taVyHWs~~~~s~-----P~kvF 143 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQ-----PVKMF 143 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEECSSSEEEEEE-SSEEEEEESSTTCC-----CEEEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEecCCCeEEEEc-CCcEEEEcccCCCC-----Cceee
Confidence 34588888777766 678999999999999888754 467777887676555543 45799999874322 22222
Q ss_pred hcc----CCcEEEEEEccCCCEEEEec
Q 043707 321 LKQ----ENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 321 ~~h----~~~V~~l~~~p~~~~l~sgs 343 (347)
..| ...|..-..+++.++++..|
T Consensus 144 dR~~~L~~~QIInY~~d~~~kW~~l~G 170 (365)
T 2xzh_A 144 DRHSSLAGCQIINYRTDAKQKWLLLTG 170 (365)
T ss_dssp ECCGGGTTCEEEEEEECTTSCEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCEEEEEe
Confidence 222 46788888899988877654
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=89.63 E-value=8.6 Score=32.51 Aligned_cols=94 Identities=10% Similarity=0.105 Sum_probs=44.2
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCEEEE--EEecCCCcEEEEEeCCCCEEEEEeCC-----CcEEEEEcccCCccce
Q 043707 246 EQGLLYSGSWD-----KTLKVWRISDCKCLE--SINAHDDAINSVVAGFDSLVFTGSAD-----GTVKVWRRELQGKGTK 313 (347)
Q Consensus 246 ~~~~l~s~s~d-----g~i~vwdl~~~~~~~--~~~~h~~~v~~i~~~~~~~l~s~~~d-----g~I~vwd~~~~~~~~~ 313 (347)
++.+++.|+.+ ..+.+||+.+.+-.. .+......-..+.+ .+.+++.|+.+ ..+.+||+....
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~---- 195 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-NRLLYAVGGFDGTNRLNSAECYYPERNE---- 195 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTE----
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCCe----
Confidence 45556665532 358889987764322 22211111222233 23355566654 458888886431
Q ss_pred eeehhhhhccCCcEEEEEEccCCCEEEEecCCC
Q 043707 314 HFLAQVLLKQENAITALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 314 ~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~DG 346 (347)
...+..+.........+.+ ++++++.|+.++
T Consensus 196 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 226 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDG 226 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EeeCCCCCCccccceEEEE--CCEEEEEeCCCC
Confidence 2222222211112222333 567777777653
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=89.45 E-value=2.1 Score=37.60 Aligned_cols=107 Identities=9% Similarity=0.009 Sum_probs=58.8
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEE-------ecCCCcEEEEEeCCC----CEEEEEeC--------
Q 043707 236 DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESI-------NAHDDAINSVVAGFD----SLVFTGSA-------- 296 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~-------~~h~~~v~~i~~~~~----~~l~s~~~-------- 296 (347)
.....|+|.|+++.|+++...|.|++++. +++....+ .........|+++|+ +.|+.+..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 45678999999983445556899999985 34432111 112345789999995 55544422
Q ss_pred CCcEEEEEcccCCc--cceeeehhhhh---ccCCcEEEEEEccCCCEEEEec
Q 043707 297 DGTVKVWRRELQGK--GTKHFLAQVLL---KQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 297 dg~I~vwd~~~~~~--~~~~~~~~~~~---~h~~~V~~l~~~p~~~~l~sgs 343 (347)
...|..|++..... .....++..+. ........|+|.|||.+.++.+
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEEC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEEC
Confidence 23555565542211 01111221221 1111235799999996666544
No 327
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.59 E-value=10 Score=31.88 Aligned_cols=61 Identities=18% Similarity=0.228 Sum_probs=32.6
Q ss_pred CCCEEEEEeCC-----CcEEEEeCCCCEEEE--EEecCCCcEEEEEeCCCCEEEEEeCCC-----cEEEEEccc
Q 043707 246 EQGLLYSGSWD-----KTLKVWRISDCKCLE--SINAHDDAINSVVAGFDSLVFTGSADG-----TVKVWRREL 307 (347)
Q Consensus 246 ~~~~l~s~s~d-----g~i~vwdl~~~~~~~--~~~~h~~~v~~i~~~~~~~l~s~~~dg-----~I~vwd~~~ 307 (347)
++.+++.|+.+ ..+.+||+.+.+-.. .+.........+. ..+.+++.|+.++ .|.+||+..
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCC
Confidence 45666666653 368899998764322 1211111112222 2233666666553 488888864
No 328
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.58 E-value=14 Score=33.53 Aligned_cols=167 Identities=12% Similarity=0.138 Sum_probs=99.7
Q ss_pred ceeEeeeeccc----cEEEEe--ecCCEEEE-ec------CCCcEEEEeCCCc-ceeeecCCCCeeEEEEeCCC---CEE
Q 043707 114 GLIGSIVRKEG----HIYSLA--ASGDLLYT-GS------DSKNIRVWKNLKE-FSGFKSNSGLVKAIIITGDS---NKI 176 (347)
Q Consensus 114 ~~i~~l~~h~~----~V~~l~--~~~~~l~t-g~------~dg~I~vwd~~~~-~~~~~~h~~~V~~l~~sp~~---~~l 176 (347)
.+++.+..|.. .|.... .+.++++. |- -.|.+.+|...+. .+.+.+|.+.-..+....+. +.|
T Consensus 137 ~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf 216 (494)
T 1bpo_A 137 QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLF 216 (494)
T ss_dssp CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEE
T ss_pred CchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEE
Confidence 34555555543 344444 34555443 31 2478889987655 56677776555444432211 133
Q ss_pred EEEeCC---CcEEEEecCCC---CCceee---eecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCC
Q 043707 177 FTGHQD---GKIRIWKVSRK---NPSVHK---RVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQ 247 (347)
Q Consensus 177 ~s~~~D---g~I~vwd~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~ 247 (347)
+.+... ++++|-++... .....+ .+...|. ...+---++..++..
T Consensus 217 ~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe--------------------------~~~DFPvamqvs~ky 270 (494)
T 1bpo_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE--------------------------AQNDFPVAMQISEKH 270 (494)
T ss_dssp EEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT--------------------------STTCCEEEEEEETTT
T ss_pred EEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc--------------------------cccCceeEEEecccC
Confidence 434332 78999988643 111111 1111111 123445678899998
Q ss_pred CEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-CEEEEEeCCCcEEEEEcc
Q 043707 248 GLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-SLVFTGSADGTVKVWRRE 306 (347)
Q Consensus 248 ~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~~l~s~~~dg~I~vwd~~ 306 (347)
..++.-+.-|.|++||+.++.++..-+--.+.|..-+.... +=++.....|.|.--.++
T Consensus 271 gviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 271 DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred CEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 99999999999999999999999888766777755544433 345555588887766665
No 329
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=87.93 E-value=13 Score=32.42 Aligned_cols=64 Identities=6% Similarity=0.012 Sum_probs=37.3
Q ss_pred CcEEEEEeC-------CCC-EEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEEEec
Q 043707 278 DAINSVVAG-------FDS-LVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 278 ~~v~~i~~~-------~~~-~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs 343 (347)
.....+++. .++ ++++.-..+.|...++...+.... ....+......+..|++.|||.+.++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~--~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRK--ISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEE--EEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccc--eeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 346777773 345 455555667888887764322100 1111222245789999999998776653
No 330
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.76 E-value=16 Score=33.39 Aligned_cols=29 Identities=17% Similarity=0.386 Sum_probs=23.2
Q ss_pred CeeEEEEeCCCC-EEEEEeCCCcEEEEecC
Q 043707 163 LVKAIIITGDSN-KIFTGHQDGKIRIWKVS 191 (347)
Q Consensus 163 ~V~~l~~sp~~~-~l~s~~~Dg~I~vwd~~ 191 (347)
.-+.|+|.|++. .|+.+...|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCC
Confidence 467899999986 56677789999999754
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.30 E-value=17 Score=33.01 Aligned_cols=95 Identities=13% Similarity=0.090 Sum_probs=65.7
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhh
Q 043707 241 LSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVL 320 (347)
Q Consensus 241 l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~ 320 (347)
.-.+|..+.|+.-. ..++.|+|+++...++.+.-.+ .|.--.|-.+..|+-. .+..|+-|++..... +.+.+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~lV-T~taVyHWsi~~~s~-----P~kvF 142 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TDNAVYHWSMEGESQ-----PVKMF 142 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEEE-CSSEEEEEESSSSCC-----CEEEE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEEE-cCCeeEEecccCCCC-----chhhe
Confidence 44677777777665 6889999999999998887554 4666677666655544 356899999864222 22222
Q ss_pred hcc----CCcEEEEEEccCCCEEEEec
Q 043707 321 LKQ----ENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 321 ~~h----~~~V~~l~~~p~~~~l~sgs 343 (347)
..| ...|..-..+++.++++..|
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~G 169 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTG 169 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEE
T ss_pred ecchhcccceEEEEEECCCCCeEEEEe
Confidence 222 46788888899998877654
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.12 E-value=7.5 Score=33.63 Aligned_cols=13 Identities=8% Similarity=0.251 Sum_probs=9.1
Q ss_pred cCCCEEEEecCCC
Q 043707 334 QESAVVYCGSSDG 346 (347)
Q Consensus 334 p~~~~l~sgs~DG 346 (347)
-++++++.||.++
T Consensus 315 ~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 315 WNNSLLIIGGETA 327 (357)
T ss_dssp ETTEEEEEEEECG
T ss_pred eCCEEEEEeeeCC
Confidence 3678888888653
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=85.83 E-value=0.83 Score=39.98 Aligned_cols=30 Identities=13% Similarity=0.284 Sum_probs=25.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEec
Q 043707 246 EQGLLYSGSWDKTLKVWRISDCKCLESINA 275 (347)
Q Consensus 246 ~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~ 275 (347)
.+..+++|+.+|++...|+++|+.+..+..
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 356788999999999999999998888763
No 334
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=85.49 E-value=16 Score=31.07 Aligned_cols=61 Identities=8% Similarity=-0.025 Sum_probs=31.6
Q ss_pred EEcCCCCEEEEEeC-CCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC-EEEEEe-CC-CcEEEEEcc
Q 043707 242 SLNAEQGLLYSGSW-DKTLKVWRISDCKCLESINAHDDAINSVVAGFDS-LVFTGS-AD-GTVKVWRRE 306 (347)
Q Consensus 242 ~~~~~~~~l~s~s~-dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~-~l~s~~-~d-g~I~vwd~~ 306 (347)
.++++++.|+-.+. ..+|.+-++..+.....+. +... ..+.|++ +|+-.. .+ ..|..-++.
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ld 215 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNIN 215 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSS
T ss_pred EeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECC
Confidence 45666777665554 5778888887665443333 2222 2344655 544333 23 244444443
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=84.66 E-value=17 Score=30.67 Aligned_cols=61 Identities=7% Similarity=0.060 Sum_probs=31.5
Q ss_pred CCCEEEEEeC------CCcEEEEeCCCCEEE--EEEecCCCcEEEEEeCCCCEEEEEeCCC-----cEEEEEccc
Q 043707 246 EQGLLYSGSW------DKTLKVWRISDCKCL--ESINAHDDAINSVVAGFDSLVFTGSADG-----TVKVWRREL 307 (347)
Q Consensus 246 ~~~~l~s~s~------dg~i~vwdl~~~~~~--~~~~~h~~~v~~i~~~~~~~l~s~~~dg-----~I~vwd~~~ 307 (347)
++.+++.|+. -..+.+||+.+.+-. ..+......-.++.+ .+.+++.|+.++ .+.+||+.+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCC
Confidence 4456666654 245889998776422 222211111122222 334666666544 577888764
No 336
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.57 E-value=21 Score=32.58 Aligned_cols=110 Identities=8% Similarity=0.031 Sum_probs=60.9
Q ss_pred CCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCC---EEEEEEe---c------CCCcEEEEEeCCC----CEEEEE--e-
Q 043707 236 DAVSCLSLNAEQG-LLYSGSWDKTLKVWRISDC---KCLESIN---A------HDDAINSVVAGFD----SLVFTG--S- 295 (347)
Q Consensus 236 ~~V~~l~~~~~~~-~l~s~s~dg~i~vwdl~~~---~~~~~~~---~------h~~~v~~i~~~~~----~~l~s~--~- 295 (347)
...+.|+|.|++. .|+++...|.|++++.... +.+..+. . .+.....|+++|+ ++|+.. .
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4567899999985 4555667899999975322 1223221 1 1456788999997 433322 1
Q ss_pred CC----------CcEEEEEcccCC-c----cceeeehhhh-hccCCcEEEEEEccCCCEEEEecCC
Q 043707 296 AD----------GTVKVWRRELQG-K----GTKHFLAQVL-LKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 296 ~d----------g~I~vwd~~~~~-~----~~~~~~~~~~-~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
.+ ..|.-|.+.... . .....++... ......-..|+|.|||.+.++.++.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 12 134445553210 0 0111122111 1112346799999999887776654
No 337
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=83.16 E-value=19 Score=30.11 Aligned_cols=62 Identities=11% Similarity=0.097 Sum_probs=31.9
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCEEEEE--EecCCCcEEEEEeCCCCEEEEEeC---------CCcEEEEEcccC
Q 043707 246 EQGLLYSGSWD------KTLKVWRISDCKCLES--INAHDDAINSVVAGFDSLVFTGSA---------DGTVKVWRRELQ 308 (347)
Q Consensus 246 ~~~~l~s~s~d------g~i~vwdl~~~~~~~~--~~~h~~~v~~i~~~~~~~l~s~~~---------dg~I~vwd~~~~ 308 (347)
++.+++.|+.+ ..+.+||+.+.+-... +......-..+.+ .+.+++.|+. -..+.+||+...
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 45666666654 4588999887653222 2111111122222 2335555543 345888888643
No 338
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.28 E-value=20 Score=36.12 Aligned_cols=38 Identities=13% Similarity=0.119 Sum_probs=31.9
Q ss_pred CeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeee
Q 043707 163 LVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKR 200 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~ 200 (347)
.+.+++..++..++++-+.|+++|+|++.+++......
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 57788888888899999999999999999987654443
No 339
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=81.86 E-value=50 Score=33.99 Aligned_cols=70 Identities=16% Similarity=0.026 Sum_probs=43.8
Q ss_pred EEEEeecCCEEEEecCCCcEEEEeCCC-ccee--eecCCCCeeEEEEeCC------CCEEEEEeC-CCcEEEEecCCCCC
Q 043707 126 IYSLAASGDLLYTGSDSKNIRVWKNLK-EFSG--FKSNSGLVKAIIITGD------SNKIFTGHQ-DGKIRIWKVSRKNP 195 (347)
Q Consensus 126 V~~l~~~~~~l~tg~~dg~I~vwd~~~-~~~~--~~~h~~~V~~l~~sp~------~~~l~s~~~-Dg~I~vwd~~~~~~ 195 (347)
|.+.+.++.+++.+. ++.+.+++... .+.. -..-...|.|+++.|. ..+++.|.. |++|+|+.+..-+.
T Consensus 516 I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~ 594 (1158)
T 3ei3_A 516 ISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL 594 (1158)
T ss_dssp CCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe
Confidence 333444455666664 56777775431 1111 1123467999999763 368999996 99999999986544
Q ss_pred c
Q 043707 196 S 196 (347)
Q Consensus 196 ~ 196 (347)
.
T Consensus 595 ~ 595 (1158)
T 3ei3_A 595 L 595 (1158)
T ss_dssp E
T ss_pred E
Confidence 3
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=81.25 E-value=24 Score=29.81 Aligned_cols=93 Identities=6% Similarity=0.142 Sum_probs=43.0
Q ss_pred CCCEEEEEeC------CCcEEEEeCCCCEEEE--EEecCCCcEEEEEeCCCCEEEEEeCC-----CcEEEEEcccCCccc
Q 043707 246 EQGLLYSGSW------DKTLKVWRISDCKCLE--SINAHDDAINSVVAGFDSLVFTGSAD-----GTVKVWRRELQGKGT 312 (347)
Q Consensus 246 ~~~~l~s~s~------dg~i~vwdl~~~~~~~--~~~~h~~~v~~i~~~~~~~l~s~~~d-----g~I~vwd~~~~~~~~ 312 (347)
++.+++.|+. -..+.+||+.+.+-.. .+.........+.+ .+.+++.|+.+ ..+.+||+.+..
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~--- 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNK--- 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCC---
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCe---
Confidence 4556666653 2358899998765322 12211111122222 33455566543 346678876432
Q ss_pred eeeehhhhhccCCcEEEEEEccCCCEEEEecCC
Q 043707 313 KHFLAQVLLKQENAITALAVNQESAVVYCGSSD 345 (347)
Q Consensus 313 ~~~~~~~~~~h~~~V~~l~~~p~~~~l~sgs~D 345 (347)
...+..+.........+.+ ++++++.||.+
T Consensus 234 -W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 263 (318)
T 2woz_A 234 -WEVMTEFPQERSSISLVSL--AGSLYAIGGFA 263 (318)
T ss_dssp -EEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred -EEECCCCCCcccceEEEEE--CCEEEEECCee
Confidence 2222222211111122222 56777777764
No 341
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=79.44 E-value=27 Score=29.38 Aligned_cols=61 Identities=8% Similarity=0.096 Sum_probs=31.2
Q ss_pred CCCEEEEEeCC--------CcEEEEeCCCCEE--EEEEecCCCcEEEEEeCCCCEEEEEeC-C-----CcEEEEEccc
Q 043707 246 EQGLLYSGSWD--------KTLKVWRISDCKC--LESINAHDDAINSVVAGFDSLVFTGSA-D-----GTVKVWRREL 307 (347)
Q Consensus 246 ~~~~l~s~s~d--------g~i~vwdl~~~~~--~~~~~~h~~~v~~i~~~~~~~l~s~~~-d-----g~I~vwd~~~ 307 (347)
++.+++.|+.+ ..+.+||+.+.+- +..+......-..+. ..+.+++.|+. + ..+.+||..+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 44556666532 4588999887642 222221111122222 22335566665 2 4688888864
No 342
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=78.70 E-value=2.3 Score=37.14 Aligned_cols=107 Identities=9% Similarity=0.001 Sum_probs=61.3
Q ss_pred EEEEEeCCCcEEEEecCCCCCceeeeecc-cccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEE
Q 043707 175 KIFTGHQDGKIRIWKVSRKNPSVHKRVGS-LPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSG 253 (347)
Q Consensus 175 ~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~ 253 (347)
.++.++.||.|.-.|..+++..-...... .+. + ....... ..++..++..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~-----------------------~--~~~~~~~----~~~~~~~vv~ 62 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPL-----------------------I--EIQEPSR----LETYETLIIE 62 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCS-----------------------E--ECCCSCT----TTSSEEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCc-----------------------E--EecCCcc----ccCCcEEEEE
Confidence 78889999999999988886543332210 000 0 0000000 0123333333
Q ss_pred -eCCCcEEEEeCCCCEEEEEEecC----CCcEEE---EEe------CCCCEEEEEeCCCcEEEEEcccCCc
Q 043707 254 -SWDKTLKVWRISDCKCLESINAH----DDAINS---VVA------GFDSLVFTGSADGTVKVWRRELQGK 310 (347)
Q Consensus 254 -s~dg~i~vwdl~~~~~~~~~~~h----~~~v~~---i~~------~~~~~l~s~~~dg~I~vwd~~~~~~ 310 (347)
..||.|..++..+|.....+... ..++.. ... +.++.+++|+.+|++...|++++..
T Consensus 63 p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 63 PFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp CSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCE
T ss_pred ECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcE
Confidence 57999999999888655444321 122221 001 1466889999999999998886653
No 343
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.12 E-value=7.5 Score=40.02 Aligned_cols=38 Identities=26% Similarity=0.373 Sum_probs=32.2
Q ss_pred CeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEe
Q 043707 237 AVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESIN 274 (347)
Q Consensus 237 ~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~ 274 (347)
.+.+++..++..++++-+.|+++|||++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 44556667788999999999999999999999988754
No 344
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=77.73 E-value=30 Score=28.96 Aligned_cols=64 Identities=16% Similarity=0.150 Sum_probs=33.3
Q ss_pred cEEEEeecCCEEEEecCCCcEEEEeCCCc--ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCC
Q 043707 125 HIYSLAASGDLLYTGSDSKNIRVWKNLKE--FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSR 192 (347)
Q Consensus 125 ~V~~l~~~~~~l~tg~~dg~I~vwd~~~~--~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~ 192 (347)
.|..++......+.-. ||.|+.|-.... +-.-..-...|..|+...+ ..+.-. ||.|..|-...
T Consensus 64 ~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~ 129 (282)
T 3qhy_B 64 GVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDS 129 (282)
T ss_dssp CCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCT
T ss_pred CEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCC
Confidence 3445555444322224 788888852211 1000011246777776655 334444 88999997654
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=74.22 E-value=64 Score=31.00 Aligned_cols=64 Identities=6% Similarity=0.119 Sum_probs=36.3
Q ss_pred CCCEEEEEeCCC--cEEEEeCCCCEEEEEE-----ecCCCcEEEEEeCCC-C-EEEEEeC--C-----CcEEEEEcccCC
Q 043707 246 EQGLLYSGSWDK--TLKVWRISDCKCLESI-----NAHDDAINSVVAGFD-S-LVFTGSA--D-----GTVKVWRRELQG 309 (347)
Q Consensus 246 ~~~~l~s~s~dg--~i~vwdl~~~~~~~~~-----~~h~~~v~~i~~~~~-~-~l~s~~~--d-----g~I~vwd~~~~~ 309 (347)
++.+++.|+.++ .+.+||..+.+-...- ......-.++.+..+ + +++.|+. + +.+.+||+....
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 677888877654 6899999876532211 111112233444444 4 5556654 2 458888887543
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=72.78 E-value=43 Score=35.32 Aligned_cols=143 Identities=9% Similarity=0.100 Sum_probs=78.4
Q ss_pred CCCcEEEEeCCCc-ceeeecCCCCeeEEEEeC--CCC-EEEEEeC---CCcEEEEecCCC---CCceeeeecccccccce
Q 043707 141 DSKNIRVWKNLKE-FSGFKSNSGLVKAIIITG--DSN-KIFTGHQ---DGKIRIWKVSRK---NPSVHKRVGSLPTFKDY 210 (347)
Q Consensus 141 ~dg~I~vwd~~~~-~~~~~~h~~~V~~l~~sp--~~~-~l~s~~~---Dg~I~vwd~~~~---~~~~~~~~~~~~~~~~~ 210 (347)
-.|.+.+|...+. .+.+.+|.+.-..+.... ... .++.+.. .++++|-++... .....+.........
T Consensus 177 v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~-- 254 (1630)
T 1xi4_A 177 VVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPP-- 254 (1630)
T ss_pred ccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCc--
Confidence 4588999986644 445667765544444321 112 2222221 268888888553 111111000000000
Q ss_pred EEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCC-C
Q 043707 211 VKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFD-S 289 (347)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~-~ 289 (347)
....+-...+..++....++.-+.-|.|.++|+.++.++..-+--...|...+.... +
T Consensus 255 ---------------------~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~ 313 (1630)
T 1xi4_A 255 ---------------------EAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATA 313 (1630)
T ss_pred ---------------------ccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCC
Confidence 012333456888888888999999999999999999988766555555544443322 2
Q ss_pred EEEEEeCCCcEEEEEcc
Q 043707 290 LVFTGSADGTVKVWRRE 306 (347)
Q Consensus 290 ~l~s~~~dg~I~vwd~~ 306 (347)
=++.....|.|.--.+.
T Consensus 314 g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 314 GIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred ceEEEcCCceEEEEEEc
Confidence 33333466665555443
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=71.85 E-value=44 Score=28.08 Aligned_cols=60 Identities=12% Similarity=0.164 Sum_probs=30.2
Q ss_pred CCCEEEEEeCC-------CcEEEEeCCCCEEEEE--EecCCCcEEEEEeCCCC-EEEEEeC------CCcEEEEEccc
Q 043707 246 EQGLLYSGSWD-------KTLKVWRISDCKCLES--INAHDDAINSVVAGFDS-LVFTGSA------DGTVKVWRREL 307 (347)
Q Consensus 246 ~~~~l~s~s~d-------g~i~vwdl~~~~~~~~--~~~h~~~v~~i~~~~~~-~l~s~~~------dg~I~vwd~~~ 307 (347)
++.+++.|+.+ ..+.+||+.+.+-... +......-. ++.. ++ +++.|+. -..+.+||+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHN-VISH-NGMIYCLGGKTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCE-EEEE-TTEEEEECCEESSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccE-EEEE-CCEEEEEcCCCCCCCccceEEEEcCCC
Confidence 45666666653 2477888877643221 111111111 2222 44 5555553 23588888864
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=71.72 E-value=47 Score=28.39 Aligned_cols=49 Identities=16% Similarity=-0.066 Sum_probs=24.2
Q ss_pred CcEEEEeCCCCE--EEEEEecCCCcEEEEEeCCCCEEEEEeC------CCcEEEEEc
Q 043707 257 KTLKVWRISDCK--CLESINAHDDAINSVVAGFDSLVFTGSA------DGTVKVWRR 305 (347)
Q Consensus 257 g~i~vwdl~~~~--~~~~~~~h~~~v~~i~~~~~~~l~s~~~------dg~I~vwd~ 305 (347)
..+.+||..+.+ .+..+......-.+++...+.+++.|+. ...+.+||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 468899988764 3333321111102233333345555553 245667776
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=70.13 E-value=79 Score=30.34 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=34.0
Q ss_pred cCCEEEEecCCC------cEEEEeCCCccee-eec-CCCC-eeEEEEeCCCCEEEEEeCCC--cEEEEecCCCC
Q 043707 132 SGDLLYTGSDSK------NIRVWKNLKEFSG-FKS-NSGL-VKAIIITGDSNKIFTGHQDG--KIRIWKVSRKN 194 (347)
Q Consensus 132 ~~~~l~tg~~dg------~I~vwd~~~~~~~-~~~-h~~~-V~~l~~sp~~~~l~s~~~Dg--~I~vwd~~~~~ 194 (347)
++++++.|+.++ .+.+||....... ... .... -.+++...++..++.|+.++ .+.+||..+..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCc
Confidence 666777776543 4677775532111 110 0011 11223324777888887655 68888887653
No 350
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=70.12 E-value=14 Score=35.62 Aligned_cols=37 Identities=8% Similarity=0.246 Sum_probs=27.9
Q ss_pred CeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeee
Q 043707 163 LVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRV 201 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~ 201 (347)
.|.++.+ +..++++-+.|+++|+|++++++......+
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3554444 456999999999999999999876555444
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=69.98 E-value=47 Score=27.71 Aligned_cols=165 Identities=12% Similarity=0.125 Sum_probs=86.1
Q ss_pred cEEEEeecCCEEEEecCCCcEEEEeCCCc--ceeeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeec
Q 043707 125 HIYSLAASGDLLYTGSDSKNIRVWKNLKE--FSGFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVG 202 (347)
Q Consensus 125 ~V~~l~~~~~~l~tg~~dg~I~vwd~~~~--~~~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~ 202 (347)
.|..++......+.-. ||.|+.|-.... +-........|..|+.-.+ ..+.-. ||.|..|-.....+..
T Consensus 103 ~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~gqlg----- 173 (282)
T 3qhy_B 103 GVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYFGQTT----- 173 (282)
T ss_dssp SEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTTSTTS-----
T ss_pred CeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCCCCCC-----
Confidence 4556665555444445 899999953221 1111112245767665443 333333 7999999765432221
Q ss_pred ccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEE
Q 043707 203 SLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINS 282 (347)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~ 282 (347)
.|. .-...|..++..... .++. .||.++.|-......+..-......|..
T Consensus 174 -~p~--------------------------~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~ 223 (282)
T 3qhy_B 174 -VPA--------------------------EAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSA 223 (282)
T ss_dssp -CCG--------------------------GGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCE
T ss_pred -Cce--------------------------ecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceE
Confidence 000 012346666654433 3333 4888999875432211100111235778
Q ss_pred EEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhhccCCcEEEEEEccCCCEEE
Q 043707 283 VVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLLKQENAITALAVNQESAVVY 340 (347)
Q Consensus 283 i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l~ 340 (347)
|+......++.. ||.|..|-....+. ... ...|..|+.-....+.+
T Consensus 224 i~~G~~h~~al~--~g~v~~wG~n~~gq------~~v----~~~v~~iaaG~~h~~al 269 (282)
T 3qhy_B 224 IASGEWYSLALK--NGKVIAWGSSRTAP------SSV----QSGVSSIEAGPNAAYAL 269 (282)
T ss_dssp EEECSSCEEEEE--TTEEEEESTTCCCC------GGG----SSCEEEEEECSSCEEEE
T ss_pred EEcCCCEEEEEE--CCEEEEecCCCCcc------ccC----CCCcEEEEECcCeEEEE
Confidence 887666655554 99999997653321 222 23677777765544433
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=69.15 E-value=58 Score=28.41 Aligned_cols=62 Identities=11% Similarity=0.112 Sum_probs=33.4
Q ss_pred CCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEec-----C--------CCcEEEEEeCCC--CEEEEEeCCC
Q 043707 236 DAVSCLSLNAE-QGLLYSGSWDKTLKVWRISDCKCLESINA-----H--------DDAINSVVAGFD--SLVFTGSADG 298 (347)
Q Consensus 236 ~~V~~l~~~~~-~~~l~s~s~dg~i~vwdl~~~~~~~~~~~-----h--------~~~v~~i~~~~~--~~l~s~~~dg 298 (347)
..+.+|.++|. ...|+.+..++.|...+ ..++....+.. + ...+.+|++.|. +.|+++...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 45778888873 34455554444444433 22332222211 0 124888999886 5677766554
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.92 E-value=9.3 Score=36.85 Aligned_cols=38 Identities=16% Similarity=0.400 Sum_probs=31.6
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEec
Q 043707 236 DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESINA 275 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~ 275 (347)
..|.|+.+. ..++++-+.|+++|+|++++++++.+..-
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 457766654 67999999999999999999999887754
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=66.77 E-value=5.9 Score=37.09 Aligned_cols=108 Identities=12% Similarity=0.025 Sum_probs=66.2
Q ss_pred cCCCeeEEEEcCCCCEEEEEeC-CCcEEEEeCCCC------EE-------EEEEecCCCcEEEEEeCCCCEEEEE-eCCC
Q 043707 234 HYDAVSCLSLNAEQGLLYSGSW-DKTLKVWRISDC------KC-------LESINAHDDAINSVVAGFDSLVFTG-SADG 298 (347)
Q Consensus 234 h~~~V~~l~~~~~~~~l~s~s~-dg~i~vwdl~~~------~~-------~~~~~~h~~~v~~i~~~~~~~l~s~-~~dg 298 (347)
-......+.++|||++++.++. +.++.|+|++.. +. ....+. .-.....+|.++|..++. --|.
T Consensus 321 ~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 321 VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTT
T ss_pred CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecc
Confidence 3444567889999999888775 889999998742 11 223332 334567889999955554 5899
Q ss_pred cEEEEEcccCCc---cc-eeeehhhhhccCCcEEEEEE------ccCCCEEEEec
Q 043707 299 TVKVWRRELQGK---GT-KHFLAQVLLKQENAITALAV------NQESAVVYCGS 343 (347)
Q Consensus 299 ~I~vwd~~~~~~---~~-~~~~~~~~~~h~~~V~~l~~------~p~~~~l~sgs 343 (347)
+|.-|++....+ +. ....+..+..|-. +-.+.- .|+|++|++..
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEE
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEec
Confidence 999999974310 00 1123333333332 222322 56888888764
No 355
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=65.00 E-value=48 Score=34.99 Aligned_cols=94 Identities=13% Similarity=0.084 Sum_probs=65.2
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCCccceeeehhhhh
Q 043707 242 SLNAEQGLLYSGSWDKTLKVWRISDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVWRRELQGKGTKHFLAQVLL 321 (347)
Q Consensus 242 ~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~~~~~~~~~~~~~ 321 (347)
-.+|..+.++.-. ..++.|+|+.+...++.+.-.+ .|.--.|-.+..|+-.+ +..|.-|++.... .+...+.
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s-----~P~k~fd 143 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT-DNAVYHWSMEGES-----QPVKMFD 143 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCeeEEEc-CCeEEEeccCCCC-----ccHHHHh
Confidence 3577777776665 6789999999888887776543 56666776666554443 4579999996422 2555555
Q ss_pred cc----CCcEEEEEEccCCCEEEEec
Q 043707 322 KQ----ENAITALAVNQESAVVYCGS 343 (347)
Q Consensus 322 ~h----~~~V~~l~~~p~~~~l~sgs 343 (347)
.| ...|..-..+++.++++..|
T Consensus 144 R~~~L~~~QIinY~~d~~~kW~~l~g 169 (1630)
T 1xi4_A 144 RHSSLAGCQIINYRTDAKQKWLLLTG 169 (1630)
T ss_pred cchhcccCeeEEeeeCCCCCeEEEEe
Confidence 55 55788888889888877554
No 356
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=63.80 E-value=31 Score=32.33 Aligned_cols=84 Identities=6% Similarity=0.024 Sum_probs=50.7
Q ss_pred CeeEEEEeCCCCEEEEEe-CCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEE
Q 043707 163 LVKAIIITGDSNKIFTGH-QDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCL 241 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~-~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 241 (347)
....+.++|||++++.++ .+.+|.|+|++.-.......+ ....+.+ .....-.-.....
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~---~~~~~~~-----------------~ae~e~GlGPlHt 383 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKL---ADPRDVI-----------------VGEPELGLGPLHT 383 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCC---SCGGGGE-----------------EECCBCCSCEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccc---cCcccce-----------------EeeccCCCcccEE
Confidence 345788999999877766 678999999985321000000 0000000 0000122345678
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCC
Q 043707 242 SLNAEQGLLYSGSWDKTLKVWRISD 266 (347)
Q Consensus 242 ~~~~~~~~l~s~s~dg~i~vwdl~~ 266 (347)
+|.++|....+-.-|..|.-|++..
T Consensus 384 ~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 384 TFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EECSSSEEEEEETTTTEEEEEEHHH
T ss_pred EECCCCceEeeeeecceEEEEeccH
Confidence 9999995555666799999999864
No 357
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.56 E-value=20 Score=36.85 Aligned_cols=37 Identities=14% Similarity=0.118 Sum_probs=30.6
Q ss_pred CeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceee
Q 043707 163 LVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHK 199 (347)
Q Consensus 163 ~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~ 199 (347)
.+.+++..++..++++-+.|+++|||++.+++.....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4566777888889999999999999999998755443
No 358
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=63.17 E-value=1.1e+02 Score=29.44 Aligned_cols=109 Identities=10% Similarity=0.063 Sum_probs=65.0
Q ss_pred CCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCEEEEEEe-c-----CCCcEEEEEeCCCCEEEEEeCCCcEEEEEcccCC
Q 043707 236 DAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCKCLESIN-A-----HDDAINSVVAGFDSLVFTGSADGTVKVWRRELQG 309 (347)
Q Consensus 236 ~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~~~~~~~-~-----h~~~v~~i~~~~~~~l~s~~~dg~I~vwd~~~~~ 309 (347)
..|.++.-..++.+- .|+ ++-|..||.++++...-.. . ....|.++....++.|..|+.++-|.++|.....
T Consensus 373 ~~v~~i~~d~~g~lW-igt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~ 450 (758)
T 3ott_A 373 NRIRHIYEDKEQQLW-IAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLM 450 (758)
T ss_dssp SCEEEEEECTTSCEE-EEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHH
T ss_pred CceEEEEECCCCCEE-EEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEcccccc
Confidence 458888877777644 455 4579999988775432211 1 2345888888888888888877778888865210
Q ss_pred cc--ceee---ehhhhhc-cCCcEEEEEEccCCCEEE-EecCCC
Q 043707 310 KG--TKHF---LAQVLLK-QENAITALAVNQESAVVY-CGSSDG 346 (347)
Q Consensus 310 ~~--~~~~---~~~~~~~-h~~~V~~l~~~p~~~~l~-sgs~DG 346 (347)
.. .... ......+ ....|.+|...++|.+-+ .+..+|
T Consensus 451 ~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~G 494 (758)
T 3ott_A 451 QSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKG 494 (758)
T ss_dssp HCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSS
T ss_pred ccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCC
Confidence 00 0000 0000111 233589999988888765 344444
No 359
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=60.55 E-value=76 Score=26.76 Aligned_cols=60 Identities=12% Similarity=0.104 Sum_probs=30.5
Q ss_pred EEcCCCCEEEEEe--C--CCcEEEEeCCCCEEEEEEecCCCcEEEEEeCCCC--EEEEEeCCCcEEEEEcc
Q 043707 242 SLNAEQGLLYSGS--W--DKTLKVWRISDCKCLESINAHDDAINSVVAGFDS--LVFTGSADGTVKVWRRE 306 (347)
Q Consensus 242 ~~~~~~~~l~s~s--~--dg~i~vwdl~~~~~~~~~~~h~~~v~~i~~~~~~--~l~s~~~dg~I~vwd~~ 306 (347)
.|+++++.|+-.. . ...|...++. +.....+..+.. ..+++++ +..+.....+|.+.++.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~ 175 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTA 175 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECC
Confidence 5566777777655 2 3345555554 333444443332 2334444 33344445677666665
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=59.33 E-value=90 Score=27.16 Aligned_cols=104 Identities=13% Similarity=0.131 Sum_probs=51.7
Q ss_pred CeeEEEEcC-C-CCEEEEEeCCCcEEEEeCCCCEEEEEEec-------------------CCCcEEEEEeCCC--CEEEE
Q 043707 237 AVSCLSLNA-E-QGLLYSGSWDKTLKVWRISDCKCLESINA-------------------HDDAINSVVAGFD--SLVFT 293 (347)
Q Consensus 237 ~V~~l~~~~-~-~~~l~s~s~dg~i~vwdl~~~~~~~~~~~-------------------h~~~v~~i~~~~~--~~l~s 293 (347)
.|.+|++.| + ...|+.+...+.|...+- .++....+.. ....+.+|.+.|. +.|+.
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 577888886 2 455666665665555432 2232222211 1235788888873 34455
Q ss_pred EeCCCcEEEEEcccCCccceeeehhh-hhc-c--------CCcEEEEEEccC-CCEEEEecCC
Q 043707 294 GSADGTVKVWRRELQGKGTKHFLAQV-LLK-Q--------ENAITALAVNQE-SAVVYCGSSD 345 (347)
Q Consensus 294 ~~~dg~I~vwd~~~~~~~~~~~~~~~-~~~-h--------~~~V~~l~~~p~-~~~l~sgs~D 345 (347)
+..++.| |.....++ ....... +.. + ...+.+|+++|+ ...|+.+...
T Consensus 195 g~~~ggl--~~s~DgG~--tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 195 GMSSGGV--FESTDAGT--DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp EEETBEE--EEESSTTS--SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT
T ss_pred EECCCCE--EEECCCCC--CceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC
Confidence 5444433 43333333 1111111 000 0 135889999986 3566665443
No 361
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=50.63 E-value=1.2e+02 Score=25.98 Aligned_cols=188 Identities=13% Similarity=0.120 Sum_probs=95.8
Q ss_pred CCEEEEecCCCcEEEEeCCC-------cce--eeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecC--CCCCceeeee
Q 043707 133 GDLLYTGSDSKNIRVWKNLK-------EFS--GFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVS--RKNPSVHKRV 201 (347)
Q Consensus 133 ~~~l~tg~~dg~I~vwd~~~-------~~~--~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~--~~~~~~~~~~ 201 (347)
..+++..+.+|.|+...... ... .+.. .+.+..+........|+..+..|.+..+.+. .-........
T Consensus 109 e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~ 187 (327)
T 3uc1_A 109 APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATS 187 (327)
T ss_dssp SSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSB
T ss_pred CCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCC
Confidence 56899999999999886321 111 1222 3455556555555688888899998888776 2211100000
Q ss_pred cccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCE-------EEEEEe
Q 043707 202 GSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISDCK-------CLESIN 274 (347)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~~~-------~~~~~~ 274 (347)
+ ...+.+...+.|..+...+++..|+..+..|.++.-.+.... -+..++
T Consensus 188 G------------------------v~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~ 243 (327)
T 3uc1_A 188 G------------------------VQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVM 243 (327)
T ss_dssp C------------------------EESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSC
T ss_pred C------------------------eeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEE
Confidence 0 000111244556666655566788999999999988764322 122222
Q ss_pred --cCCCcEEEEE-eCCCCEEEEEeCCCcEEEEEccc---CCccceeeehhhhhccCCcEEEEEEccC-CCEEEEecCCC
Q 043707 275 --AHDDAINSVV-AGFDSLVFTGSADGTVKVWRREL---QGKGTKHFLAQVLLKQENAITALAVNQE-SAVVYCGSSDG 346 (347)
Q Consensus 275 --~h~~~v~~i~-~~~~~~l~s~~~dg~I~vwd~~~---~~~~~~~~~~~~~~~h~~~V~~l~~~p~-~~~l~sgs~DG 346 (347)
...+.+..+. ...+..++..+.+|.+.-++... .++.........+.. ...|.+++..+. ...+.+-+.+|
T Consensus 244 l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~-~d~vv~~~~~~~~~~~~~~~~~~g 321 (327)
T 3uc1_A 244 YDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGE-GDTLLAIARNAEESGDDNAVDANG 321 (327)
T ss_dssp CCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCCT-TCCEEEEEECC-------------
T ss_pred ecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecCC-CCEEEEEEEcCCCcceEEEEecCC
Confidence 2123344333 34445666777788877776642 122222222222322 345666665543 35566666555
No 362
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=43.17 E-value=1.5e+02 Score=25.04 Aligned_cols=196 Identities=11% Similarity=0.130 Sum_probs=0.0
Q ss_pred EEEEeecCCEEEEecCCCcEEEEeCCCcceeee----------cCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCC
Q 043707 126 IYSLAASGDLLYTGSDSKNIRVWKNLKEFSGFK----------SNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNP 195 (347)
Q Consensus 126 V~~l~~~~~~l~tg~~dg~I~vwd~~~~~~~~~----------~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~ 195 (347)
+..+-.+..++++.+.+|.|+-.....-...-. .-...+..+........++..+..|.++-.....-..
T Consensus 1 ~edli~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~ 80 (312)
T 1suu_A 1 MSDLMQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKD 80 (312)
T ss_dssp -------CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC
T ss_pred CccccCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCC
Q ss_pred ceeeeecccccccceEEeccCCCeEEEEeecce---eeeeecCCCeeEEEEcC---CCCEEEEEeCCCcEEEEeC-----
Q 043707 196 SVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRN---VLKIRHYDAVSCLSLNA---EQGLLYSGSWDKTLKVWRI----- 264 (347)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~h~~~V~~l~~~~---~~~~l~s~s~dg~i~vwdl----- 264 (347)
......+ .. .+.+...+.|..+..-+ +..+|+..+..|.++...+
T Consensus 81 ~~r~~~G------------------------~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~ 136 (312)
T 1suu_A 81 SSRASKG------------------------QNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKA 136 (312)
T ss_dssp -------------------------------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC
T ss_pred CCccCCC------------------------cChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhc
Q ss_pred --CCCEEEEEEecCCCcEEEEEeCCCCEEEEEeCCCcEEEE---EcccCCccceeeehhhhhccCCcEEEEEEccCCCEE
Q 043707 265 --SDCKCLESINAHDDAINSVVAGFDSLVFTGSADGTVKVW---RRELQGKGTKHFLAQVLLKQENAITALAVNQESAVV 339 (347)
Q Consensus 265 --~~~~~~~~~~~h~~~v~~i~~~~~~~l~s~~~dg~I~vw---d~~~~~~~~~~~~~~~~~~h~~~V~~l~~~p~~~~l 339 (347)
..+.....+...+.-+......++..++..+.+|.+..+ +++..++.......-.+.. ...|..+....++..|
T Consensus 137 ~r~~G~~~i~L~~~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l 215 (312)
T 1suu_A 137 VKSRGVIVIKLNDKDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYL 215 (312)
T ss_dssp ----CEECBCCCTTCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEE
T ss_pred cCCCcEEEEecCCCCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeE
Q ss_pred EEecCCC
Q 043707 340 YCGSSDG 346 (347)
Q Consensus 340 ~sgs~DG 346 (347)
++.+..|
T Consensus 216 ~~vt~~G 222 (312)
T 1suu_A 216 LIVSENG 222 (312)
T ss_dssp EEEETTS
T ss_pred EEEECCC
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=38.62 E-value=1.7e+02 Score=24.25 Aligned_cols=167 Identities=11% Similarity=0.102 Sum_probs=93.8
Q ss_pred cccceeEeeeecc---ccEEEEee--cCCEEEEecCCCcEEEEeCCC---c-ceeeecCCCCeeEEEEeC--CCCEEEEE
Q 043707 111 SCNGLIGSIVRKE---GHIYSLAA--SGDLLYTGSDSKNIRVWKNLK---E-FSGFKSNSGLVKAIIITG--DSNKIFTG 179 (347)
Q Consensus 111 ~~~~~i~~l~~h~---~~V~~l~~--~~~~l~tg~~dg~I~vwd~~~---~-~~~~~~h~~~V~~l~~sp--~~~~l~s~ 179 (347)
+..|-++..++|. +.+..+.. ..+.|+.-+.+|.++--...+ . ...+......|..+.. . +..+++..
T Consensus 8 s~~Gwir~~~g~~~~gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e~i~~v~~-~~~~~~~~v~~ 86 (276)
T 3no0_A 8 LQDGSIIPVEELPLEKAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREEKIVGAFI-REKFGNRLLLA 86 (276)
T ss_dssp ETTSEEEEGGGCCSSCCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTCCEEEEEE-GGGSCSEEEEE
T ss_pred cCCceeeeccCCCCCCCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCCEEEEEEC-CcCCCCEEEEE
Confidence 3456666666663 23444432 345666777788777543211 0 0012223456666644 4 45689999
Q ss_pred eCCCcEEEEecCCCCCceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcE
Q 043707 180 HQDGKIRIWKVSRKNPSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTL 259 (347)
Q Consensus 180 ~~Dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i 259 (347)
+.+|.|+-..+..-. ...... ..+.+.-.+.+..+........++..+..|.+
T Consensus 87 T~~G~iKr~~l~~~~-~~~~G~--------------------------~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~ 139 (276)
T 3no0_A 87 TKKGYVKKIPLAEFE-YKAQGM--------------------------PIIKLTEGDEVVSIASSVDETHILLFTKKGRV 139 (276)
T ss_dssp ETTSEEEEEEGGGTT-TCSTTE--------------------------ECSCCCTTCCEEEEEECCSSCEEEEEETTSEE
T ss_pred eCCCEEEEEEHHHhh-hhcCCe--------------------------EEEecCCCCEEEEEEEeCCCCEEEEEECCCEE
Confidence 999999998876542 110000 00011133445555555555677788888888
Q ss_pred EEEeCCC---------CEEEEEEecCCCcEEEEE-eCCCCEEEEEeCCCcEEEEEcc
Q 043707 260 KVWRISD---------CKCLESINAHDDAINSVV-AGFDSLVFTGSADGTVKVWRRE 306 (347)
Q Consensus 260 ~vwdl~~---------~~~~~~~~~h~~~v~~i~-~~~~~~l~s~~~dg~I~vwd~~ 306 (347)
+.+...+ |.....+.. .+.|..+. ..++..++..+..|.++...+.
T Consensus 140 ~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 140 ARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp EEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 7776532 222223333 24455544 4445588889999999998875
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=32.65 E-value=2.3e+02 Score=24.12 Aligned_cols=147 Identities=14% Similarity=0.088 Sum_probs=82.3
Q ss_pred cCCEEEEecCCCcEEEEe---CCCc-----------ceeeecCCCCeeEEEEeC---CCCEEEEEeCCCcEEEEecCCCC
Q 043707 132 SGDLLYTGSDSKNIRVWK---NLKE-----------FSGFKSNSGLVKAIIITG---DSNKIFTGHQDGKIRIWKVSRKN 194 (347)
Q Consensus 132 ~~~~l~tg~~dg~I~vwd---~~~~-----------~~~~~~h~~~V~~l~~sp---~~~~l~s~~~Dg~I~vwd~~~~~ 194 (347)
..+.|+.-+..|.++-.. +... +..+. ....|..+...+ +..+++.++.+|.|+--.+..-.
T Consensus 52 t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~ 130 (327)
T 3uc1_A 52 THDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFD 130 (327)
T ss_dssp TTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGC
T ss_pred CCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhh
Confidence 355666666777776554 2211 01111 234566654443 46799999999999988776532
Q ss_pred CceeeeecccccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCC--C------
Q 043707 195 PSVHKRVGSLPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRIS--D------ 266 (347)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~--~------ 266 (347)
....... ..+...-.+.+..+........|+..+..|.+..+... .
T Consensus 131 ~~~r~G~--------------------------~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr 184 (327)
T 3uc1_A 131 SNRSGGI--------------------------VAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGR 184 (327)
T ss_dssp CCCSSCE--------------------------ESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCT
T ss_pred ccccCce--------------------------EEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCc
Confidence 1110000 00011123444444444455667777788888777665 2
Q ss_pred ---CEEEEEEecCCCcEEEEEeCC-CCEEEEEeCCCcEEEEEcc
Q 043707 267 ---CKCLESINAHDDAINSVVAGF-DSLVFTGSADGTVKVWRRE 306 (347)
Q Consensus 267 ---~~~~~~~~~h~~~v~~i~~~~-~~~l~s~~~dg~I~vwd~~ 306 (347)
|.....+. ....|.++...+ +..|+..+..|.++.-.+.
T Consensus 185 ~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 185 ATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp TSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 11222233 234566655444 4588899999999988765
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=32.61 E-value=2.1e+02 Score=23.63 Aligned_cols=149 Identities=14% Similarity=0.127 Sum_probs=85.0
Q ss_pred cCCEEEEecCCCcEEEEeCCCc------ce--eeecCCCCeeEEEEeCCCCEEEEEeCCCcEEEEecCCCCCceeeeecc
Q 043707 132 SGDLLYTGSDSKNIRVWKNLKE------FS--GFKSNSGLVKAIIITGDSNKIFTGHQDGKIRIWKVSRKNPSVHKRVGS 203 (347)
Q Consensus 132 ~~~~l~tg~~dg~I~vwd~~~~------~~--~~~~h~~~V~~l~~sp~~~~l~s~~~Dg~I~vwd~~~~~~~~~~~~~~ 203 (347)
...+++..+.+|.|+-...... .. .+.. .+.+..+........++..+..|.+..++...-........+
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~G- 156 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARG- 156 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCC-
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCC-
Confidence 3568999999999999863221 11 1222 245555555555568888889999888876432211000000
Q ss_pred cccccceEEeccCCCeEEEEeecceeeeeecCCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC-------CEEEEEEecC
Q 043707 204 LPTFKDYVKSSVNPKNYVEVRRNRNVLKIRHYDAVSCLSLNAEQGLLYSGSWDKTLKVWRISD-------CKCLESINAH 276 (347)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~-------~~~~~~~~~h 276 (347)
...+.+...+.|..+...+++..++..+..|.++...+.. ++-+..+. .
T Consensus 157 -----------------------v~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~-~ 212 (276)
T 3no0_A 157 -----------------------VQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSG-T 212 (276)
T ss_dssp -----------------------EECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCC-S
T ss_pred -----------------------EEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEc-C
Confidence 0001112334555555445566888889999999888743 22233332 2
Q ss_pred CCcEEEE-EeCCCCEEEEEeCCCcEEE--EEcc
Q 043707 277 DDAINSV-VAGFDSLVFTGSADGTVKV--WRRE 306 (347)
Q Consensus 277 ~~~v~~i-~~~~~~~l~s~~~dg~I~v--wd~~ 306 (347)
.+.+..+ ....+..++..+.+|.+.. ++..
T Consensus 213 ~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 213 KDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp SSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred CCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 3344444 3343446777788888877 7765
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=32.04 E-value=1.3e+02 Score=28.18 Aligned_cols=58 Identities=3% Similarity=0.100 Sum_probs=33.8
Q ss_pred cEEEEEeCCCCEEEEEeCC-------------CcEEEEEcccCCccceeeehhhhhcc-CCcEEEEEEccCCCEEEEe
Q 043707 279 AINSVVAGFDSLVFTGSAD-------------GTVKVWRRELQGKGTKHFLAQVLLKQ-ENAITALAVNQESAVVYCG 342 (347)
Q Consensus 279 ~v~~i~~~~~~~l~s~~~d-------------g~I~vwd~~~~~~~~~~~~~~~~~~h-~~~V~~l~~~p~~~~l~sg 342 (347)
....|.|.++|.|..+... +.|..++...+. +...+... ...++.++|+||++.|+++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe------l~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE------IRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC------EEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe------EEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4567889888844443221 134444443221 22222222 4579999999999988875
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=26.73 E-value=1.9e+02 Score=27.13 Aligned_cols=20 Identities=25% Similarity=0.325 Sum_probs=16.0
Q ss_pred cCCCeeEEEEcCCCCEEEEE
Q 043707 234 HYDAVSCLSLNAEQGLLYSG 253 (347)
Q Consensus 234 h~~~V~~l~~~~~~~~l~s~ 253 (347)
....++.++|+||++.|++.
T Consensus 529 ~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 529 IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TTCEEEEEEECTTSSEEEEE
T ss_pred CCccCcCeeECCCCCEEEEE
Confidence 45678999999998877765
No 368
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=22.88 E-value=3.7e+02 Score=25.20 Aligned_cols=52 Identities=8% Similarity=-0.029 Sum_probs=35.1
Q ss_pred eeEEEEcCCCCEEEEEeCC------------CcEEEEeCCCCEEEEEEecC-CCcEEEEEeCCCC
Q 043707 238 VSCLSLNAEQGLLYSGSWD------------KTLKVWRISDCKCLESINAH-DDAINSVVAGFDS 289 (347)
Q Consensus 238 V~~l~~~~~~~~l~s~s~d------------g~i~vwdl~~~~~~~~~~~h-~~~v~~i~~~~~~ 289 (347)
.-.|+|++.|.+++.-..+ ..+.+.+..+++...-+..+ ...++.++|+||+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg 542 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQ 542 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTS
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCC
Confidence 4568999999866654432 23555666667665555554 4568899999987
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=22.08 E-value=1.4e+02 Score=27.75 Aligned_cols=66 Identities=20% Similarity=0.249 Sum_probs=40.1
Q ss_pred cEEEEEeCCCC---EEEEEeCCCcEEEEEcccCCccceeeehh--hhhccCCcEE-EEEEccCCCEEEEecCCC
Q 043707 279 AINSVVAGFDS---LVFTGSADGTVKVWRRELQGKGTKHFLAQ--VLLKQENAIT-ALAVNQESAVVYCGSSDG 346 (347)
Q Consensus 279 ~v~~i~~~~~~---~l~s~~~dg~I~vwd~~~~~~~~~~~~~~--~~~~h~~~V~-~l~~~p~~~~l~sgs~DG 346 (347)
.+++|+....+ .++.|..+|.|.=..+..... ...... .+.....+|. .|.++++..+|+.++.++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~--~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~ 472 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPH--GGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQ 472 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTT--EEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCc--cceeEEEEEeecCCCccccceEEccCCCeEEEEeccc
Confidence 45666554332 778899999886655542221 101111 1222345785 899999999999988764
No 370
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=21.29 E-value=3.3e+02 Score=22.11 Aligned_cols=59 Identities=8% Similarity=-0.009 Sum_probs=33.9
Q ss_pred CCEEEEEeCCCcEEEE---eCCC----CEEEE---EEecCCCcEEEEEe-CCCCEEEEEeCCCcEEEEEcc
Q 043707 247 QGLLYSGSWDKTLKVW---RISD----CKCLE---SINAHDDAINSVVA-GFDSLVFTGSADGTVKVWRRE 306 (347)
Q Consensus 247 ~~~l~s~s~dg~i~vw---dl~~----~~~~~---~~~~h~~~v~~i~~-~~~~~l~s~~~dg~I~vwd~~ 306 (347)
...|+..+..|.++-. ++.. |+++. .+. ....|..+.. .++.+|+.++..|.++...+.
T Consensus 44 ~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~ 113 (256)
T 1zvt_A 44 NQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP-PGATVDHMLMESDDQKLLMASDAGYGFVCTFN 113 (256)
T ss_dssp TSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGG
T ss_pred CCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHH
Confidence 3445555667775544 4422 33221 122 2345666644 344578889999999999885
No 371
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=20.71 E-value=3.4e+02 Score=22.03 Aligned_cols=71 Identities=13% Similarity=0.090 Sum_probs=45.2
Q ss_pred CCCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC-------CEEEEEEecCCCcEEEEEeC--CCCEEEEEeCCCcEEEEEc
Q 043707 235 YDAVSCLSLNAEQGLLYSGSWDKTLKVWRISD-------CKCLESINAHDDAINSVVAG--FDSLVFTGSADGTVKVWRR 305 (347)
Q Consensus 235 ~~~V~~l~~~~~~~~l~s~s~dg~i~vwdl~~-------~~~~~~~~~h~~~v~~i~~~--~~~~l~s~~~dg~I~vwd~ 305 (347)
.+.|..+....++.+|+..+..|.++...+.. +.....++.. +.+..+... .+..|+..+.+|.+..+..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~-d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~ 161 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPEN-AHVMPPVVIEDASDMLLAITQAGRMLMFPV 161 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTT-CCBCCCEECCCTTCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCC-CEEEEEEEecCCCCEEEEEcCCCeEEEEEH
Confidence 44555553334566788889999999998743 3344444433 334333333 3457888889999988887
Q ss_pred c
Q 043707 306 E 306 (347)
Q Consensus 306 ~ 306 (347)
.
T Consensus 162 ~ 162 (256)
T 1zvt_A 162 S 162 (256)
T ss_dssp G
T ss_pred H
Confidence 5
No 372
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.37 E-value=2.8e+02 Score=25.29 Aligned_cols=53 Identities=11% Similarity=0.332 Sum_probs=36.4
Q ss_pred EEEEecCCCcEEEEeCC-C---------cceeeec--CCCCeeEEEEeCCCCEEEEEeCCCcEEE
Q 043707 135 LLYTGSDSKNIRVWKNL-K---------EFSGFKS--NSGLVKAIIITGDSNKIFTGHQDGKIRI 187 (347)
Q Consensus 135 ~l~tg~~dg~I~vwd~~-~---------~~~~~~~--h~~~V~~l~~sp~~~~l~s~~~Dg~I~v 187 (347)
.+..|..+|.|.-.-.. . .+..++. ...+|..|.++++..+|+.++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 68889999976543211 1 1222222 3478999999999999999998877665
No 373
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.11 E-value=3.7e+02 Score=24.50 Aligned_cols=28 Identities=25% Similarity=0.353 Sum_probs=23.5
Q ss_pred cCCCeeEEEEcCCCCEEEEEeCCCcEEE
Q 043707 234 HYDAVSCLSLNAEQGLLYSGSWDKTLKV 261 (347)
Q Consensus 234 h~~~V~~l~~~~~~~~l~s~s~dg~i~v 261 (347)
...+|..|.++++...|+.++.++.++|
T Consensus 460 ~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 460 EPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4578899999999999999998876654
Done!