Citrus Sinensis ID: 043709

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250---
Protein Sequence
MLSFDINMGITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHccccccEEEcccccccEEEEEccccccccccHHccccccccccccccHHHHHHHcccEEEEcccccccEEEEcccccccccccccccccccHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccEEcHHHHHHHHccccHHcccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccEEEEcHHHcccccHHHHEEEEHHHccccHHHHHHHHHHHHHHHHccccHcccccccEEEccccccHHHHHccccHHHccHHHcccccHHHHHHHHHHHHHEEcccHcccccHHHHEEEccccccccccccccEEEc
Coil and Loop (DISEMBL)
mlsfdinmgitteargkskescipffslASISaatdnfsmenklgeggfgpgkllngEQVAVKRLssqsgqgleEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEhmpnksldyflfdpankgrlgwgTRVRIYALHGVFSIKSDVFSFGVLLLETLsskknahfyntnSLTLLGYVIWNLwndgslwdlmdpmlqteasypilkrysnvdlfcfrenatdrptMLEIVSMLSNEivnlpypqqsafly
Flexible Loop (DISEMBL)
MLSFDINMGITteargkskescIPFFSLASISAATDNFSMENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSneivnlpypqqsafly
Low Complexity Region (SEG)
MLSFDINMGITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY
Disordered region (IsUnstruct)
*********************CIPFFSLASISAAT****************************************FKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPY********
Disordered Region (DISOPRED)
***********************PFFSLASISAATDNFSMENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY
Disordered Region (DISEMBL)
MLSFDINMGITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY
Disordered Region (DISPRO)
*******************ESCIPFFSLASISAATDNFSMENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLSFDINMGITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	253	2.2.26 [Sep-21-2011]
O64793	818	G-type lectin S-receptor-	no	no	0.537	0.166	0.577	1e-38
Q9LW83	850	G-type lectin S-receptor-	no	no	0.454	0.135	0.661	2e-37
O64774	749	G-type lectin S-receptor-	no	no	0.893	0.301	0.352	2e-36
Q9LPZ3	845	G-type lectin S-receptor-	no	no	0.525	0.157	0.547	3e-35
Q9ZT07	833	G-type lectin S-receptor-	no	no	0.533	0.162	0.532	6e-34
Q9SY89	842	Putative G-type lectin S-	no	no	0.454	0.136	0.567	4e-33
O81906	849	G-type lectin S-receptor-	no	no	0.454	0.135	0.567	5e-33
O64783	814	G-type lectin S-receptor-	no	no	0.486	0.151	0.555	2e-32
Q9LDQ3	669	Putative cysteine-rich re	no	no	0.442	0.167	0.608	2e-32
O81833	815	G-type lectin S-receptor-	no	no	0.454	0.141	0.576	2e-32

>sp|O64793|Y1675_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 OS=Arabidopsis thaliana GN=At1g67520 PE=2 SV=3

 Score =  159 bits (403), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/149 (57%), Positives = 102/149 (68%), Gaps = 13/149 (8%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +  FS  S+ +ATD+FS ENKLGEGGFGP   GKLLNGE+VA+KRLS  SGQGL EFKNE
Sbjct: 481 LQIFSFESVVSATDDFSDENKLGEGGFGPVYKGKLLNGEEVAIKRLSLASGQGLVEFKNE 540

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
            +LIAKLQ  NLV+++GCC+EK  K+LIYE+M NKSLDYFLFDP  K  L W  R RI  
Sbjct: 541 AILIAKLQHTNLVQVLGCCIEKDEKMLIYEYMQNKSLDYFLFDPLRKNVLDWTLRFRI-- 598

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAH 168
           + G+          G+L L   S  K  H
Sbjct: 599 MEGIIQ--------GLLYLHKYSRLKVIH 619

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9LW83|CE101_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2

 Score =  155 bits (393), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/118 (66%), Positives = 91/118 (77%), Gaps = 3/118 (2%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +  FS  S++ ATD FS  NKLGEGGFGP   G+L++GE+VA+KRLS  SGQGL EFKNE
Sbjct: 512 LQIFSFESVAFATDYFSDANKLGEGGFGPVYKGRLIDGEEVAIKRLSLASGQGLVEFKNE 571

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
            MLIAKLQ  NLV+++GCCVEK  K+LIYE+MPNKSLDYFLFDP  K  L W  R RI
Sbjct: 572 AMLIAKLQHTNLVKLLGCCVEKDEKMLIYEYMPNKSLDYFLFDPLRKIVLDWKLRFRI 629

Promotes the expression of genes involved in photosynthesis at least in dedifferentiated calli.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64774|Y1146_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61460 OS=Arabidopsis thaliana GN=At1g61460 PE=2 SV=4

 Score =  152 bits (384), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/284 (35%), Positives = 140/284 (49%), Gaps = 58/284 (20%)

Query: 25  FFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMM 81
            F + +I  AT+NFS+ NKLG+GGFG    GKL +G+++AVKRLSS SGQG EEF NE++
Sbjct: 441 LFEMNTIQTATNNFSLSNKLGQGGFGSVYKGKLQDGKEIAVKRLSSSSGQGKEEFMNEIV 500

Query: 82  LIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA-- 139
           LI+KLQ  NLVRI+GCC+E   ++LIYE M NKSLD FLFD   +  + W  R  I    
Sbjct: 501 LISKLQHKNLVRILGCCIEGEERLLIYEFMLNKSLDTFLFDSRKRLEIDWPKRFDIIQGI 560

Query: 140 LHGVFSIKSD------------------------VFSFGVL------------------- 156
             G+  +  D                        +  FG+                    
Sbjct: 561 ARGIHYLHRDSCLKVIHRDLKVSNILLDEKMNPKISDFGLARMYQGTEYQDNTRRVVGTL 620

Query: 157 -------LLETLSSKKNAHF-YNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL 208
                  +LE +S +K + F Y     TL+ Y  W  W +    DL+D  +        +
Sbjct: 621 GYMSPEDILEIISGEKISRFSYGKEEKTLIAYA-WESWCETGGVDLLDKDVADSCRPLEV 679

Query: 209 KRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFL 252
           +R   + L C +    DRP  LE++SML+    +LP P+Q  F+
Sbjct: 680 ERCIQIGLLCVQHQPADRPNTLELMSMLTT-TSDLPSPKQPTFV 722

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LPZ3|Y1141_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana GN=At1g11410 PE=3 SV=3

 Score =  148 bits (374), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 97/137 (70%), Gaps = 4/137 (2%)

Query: 3   SFDINMG-ITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGE 58
           SFD+    I  E   KS+   +P F L++I+ AT+NF+ +NKLG GGFGP   G L NG 
Sbjct: 487 SFDLEDSFILEELEDKSRSRELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGM 546

Query: 59  QVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDY 118
           ++AVKRLS  SGQG+EEFKNE+ LI+KLQ  NLVRI+GCCVE   K+L+YE++PNKSLDY
Sbjct: 547 EIAVKRLSKSSGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKSLDY 606

Query: 119 FLFDPANKGRLGWGTRV 135
           F+F    +  L W  R+
Sbjct: 607 FIFHEEQRAELDWPKRM 623

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZT07|RKS1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana GN=RKS1 PE=2 SV=3

 Score =  144 bits (363), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 74/139 (53%), Positives = 96/139 (69%), Gaps = 4/139 (2%)

Query: 2   LSFDINMGITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGE 58
           + FD +     E + K++   +P F L +I AAT+NFS +NKLG GGFGP   G L N  
Sbjct: 480 VPFDFDESFRFE-QDKARNRELPLFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVLQNRM 538

Query: 59  QVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDY 118
           ++AVKRLS  SGQG+EEFKNE+ LI+KLQ  NLVRI+GCCVE   K+L+YE++PNKSLDY
Sbjct: 539 EIAVKRLSRNSGQGMEEFKNEVKLISKLQHRNLVRILGCCVELEEKMLVYEYLPNKSLDY 598

Query: 119 FLFDPANKGRLGWGTRVRI 137
           F+F    +  L W  R+ I
Sbjct: 599 FIFHEEQRAELDWPKRMEI 617

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SY89|Y1661_ARATH Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana GN=At1g61610 PE=2 SV=1

 Score =  141 bits (356), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 88/118 (74%), Gaps = 3/118 (2%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +P FS  S+++AT +F+ ENKLG+GGFG    G    G ++AVKRLS +S QGLEEFKNE
Sbjct: 510 LPIFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNE 569

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++LIAKLQ  NLVR++GCC+E   K+L+YE+MPNKSLD FLFD + +G L W  R  +
Sbjct: 570 ILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGSLDWRKRWEV 627

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  141 bits (355), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 67/118 (56%), Positives = 89/118 (75%), Gaps = 3/118 (2%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +P FSL +I+ AT++F  EN+LG GGFGP   G L +G ++AVKRLS +SGQG++EFKNE
Sbjct: 514 LPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDEFKNE 573

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++LIAKLQ  NLVR++GCC E   K+L+YE+MPNKSLD+FLFD   +  + W  R  I
Sbjct: 574 IILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLRFSI 631

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64783|Y1137_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 OS=Arabidopsis thaliana GN=At1g61370 PE=3 SV=2

 Score =  139 bits (351), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 90/126 (71%), Gaps = 3/126 (2%)

Query: 15  RGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQ 71
           R + K   + FF + +I   T+NFSMENKLG+GGFGP   G L +G+++A+KRLSS SGQ
Sbjct: 478 REQLKPQDVNFFDMQTILTITNNFSMENKLGQGGFGPVYKGNLQDGKEIAIKRLSSTSGQ 537

Query: 72  GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGW 131
           GLEEF NE++LI+KLQ  NLVR++GCC+E   K+LIYE M NKSL+ F+FD   K  L W
Sbjct: 538 GLEEFMNEIILISKLQHRNLVRLLGCCIEGEEKLLIYEFMANKSLNTFIFDSTKKLELDW 597

Query: 132 GTRVRI 137
             R  I
Sbjct: 598 PKRFEI 603

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LDQ3|CRK35_ARATH Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=3

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/115 (60%), Positives = 83/115 (72%), Gaps = 3/115 (2%)

Query: 26  FSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMML 82
           FS  +I AATD FS  N +G GGFG    GKL +G +VAVKRLS  SGQG EEFKNE +L
Sbjct: 333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVL 392

Query: 83  IAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++KLQ  NLVR++G C+E   KIL+YE +PNKSLDYFLFDPA +G L W  R  I
Sbjct: 393 VSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNI 447

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|O81833|SD11_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 87/118 (73%), Gaps = 3/118 (2%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +P F   +IS ATD+FS  N LG GGFGP   GKL +G+++AVKRLS+ SGQG+EEFKNE
Sbjct: 485 LPIFDRKTISIATDDFSYVNFLGRGGFGPVYKGKLEDGQEIAVKRLSANSGQGVEEFKNE 544

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           + LIAKLQ  NLVR++GCC++    +LIYE+MPNKSLD+F+FD      L W  R+ I
Sbjct: 545 VKLIAKLQHRNLVRLLGCCIQGEECMLIYEYMPNKSLDFFIFDERRSTELDWKKRMNI 602

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
147776811	751	hypothetical protein VITISV_000269 [Viti	0.865	0.291	0.527	2e-58
296081048	711	unnamed protein product [Vitis vinifera]	0.865	0.308	0.495	6e-57
296081248	694	unnamed protein product [Vitis vinifera]	0.873	0.318	0.5	8e-54
359485739	1585	PREDICTED: G-type lectin S-receptor-like	0.865	0.138	0.495	5e-53
222618440	672	hypothetical protein OsJ_01773 [Oryza sa	0.928	0.349	0.408	4e-52
296087502	632	unnamed protein product [Vitis vinifera]	0.897	0.359	0.442	3e-50
109289920	1433	Receptor protein kinase, putative [Solan	0.964	0.170	0.41	1e-47
242089377	421	hypothetical protein SORBIDRAFT_09g00244	0.940	0.565	0.427	2e-47
255575982	759	S-locus-specific glycoprotein S6 precurs	0.853	0.284	0.431	5e-47
359480371	1314	PREDICTED: LOW QUALITY PROTEIN: putative	0.905	0.174	0.423	5e-47

>gi|147776811|emb|CAN74670.1| hypothetical protein VITISV_000269 [Vitis vinifera]

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/235 (52%), Positives = 160/235 (68%), Gaps = 16/235 (6%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +  FS  SI AA++NFS ENKLGEGGFGP   GKL  G+++AVKRLS  SGQGL EFKNE
Sbjct: 421 LKLFSFDSIVAASNNFSSENKLGEGGFGPVYKGKLPEGQEIAVKRLSRGSGQGLVEFKNE 480

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
           + LIA+LQ +NLVR++GCC +   K+LIYE MPNKSLD+FLF           T    YA
Sbjct: 481 IRLIARLQHMNLVRLLGCCSKGEEKMLIYEFMPNKSLDFFLFV---------ATCPLKYA 531

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN---SLTLLGYVIWNLWNDGSLWDLMD 196
           + G+FS+KSDV+SFGVLLLE +S +KN  FY+ +   ++ L GY  W LW +G+   L+D
Sbjct: 532 MEGIFSVKSDVYSFGVLLLEIVSGRKNKSFYHNDGALTINLAGYA-WELWKEGTSLQLVD 590

Query: 197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
           PML+   S   + R  ++ L C +E+A DRPTM  ++SML+NE V LP P   AF
Sbjct: 591 PMLEDFHSSTQMLRCIHIALLCVQESAADRPTMSTVISMLTNETVPLPNPNLPAF 645

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081048|emb|CBI18329.3| unnamed protein product [Vitis vinifera]

 Score =  226 bits (576), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 121/244 (49%), Positives = 157/244 (64%), Gaps = 25/244 (10%)

Query: 13  EARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQS 69
           E  GK     +  FS  SI AAT+NFS ENKLGEGGFGP   GKLL G+++AVKRLS  S
Sbjct: 457 EHDGKRGAHDLKLFSFDSIVAATNNFSPENKLGEGGFGPVYKGKLLEGQEIAVKRLSRGS 516

Query: 70  GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRL 129
            QGL EFKNE+ LI KLQ +NLVR++GCC++   K+LIYE MPNKSLD+FLF        
Sbjct: 517 SQGLVEFKNEIRLIVKLQHMNLVRLLGCCIKGEEKMLIYEFMPNKSLDFFLF-------- 568

Query: 130 GWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI--WNLWN 187
                       G+FS+KSDV+SFGVLLLE +S +KN  F++ +    +   +  W+LW 
Sbjct: 569 ------------GIFSVKSDVYSFGVLLLEIVSGRKNKSFHHNHGAFAINLAVYAWDLWK 616

Query: 188 DGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQ 247
           +G+  +L+DPML+   S   + R  ++ L C +E A DRPTM  ++SML+NE V LP P 
Sbjct: 617 EGTSLELVDPMLEDSYSTTQMLRCIHIALLCVQERAADRPTMSAVISMLTNETVPLPNPN 676

Query: 248 QSAF 251
             AF
Sbjct: 677 LPAF 680

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296081248|emb|CBI17992.3| unnamed protein product [Vitis vinifera]

 Score =  216 bits (550), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 117/234 (50%), Positives = 155/234 (66%), Gaps = 13/234 (5%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +PFF L  I AATD+FS  NKLG+GGFGP   GK   G+++A+KRLS  SGQGL+EFKNE
Sbjct: 439 VPFFHLEDILAATDDFSDANKLGQGGFGPVYKGKFSKGQEMAIKRLSRASGQGLQEFKNE 498

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
           ++LIAKLQ  NLVR++G CVE   KIL+YE+M NKSLD F+F        G+G     YA
Sbjct: 499 VVLIAKLQHRNLVRLLGYCVEGDEKILLYEYMANKSLDSFIF--------GFGYMSPEYA 550

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-TLLGYVIWNLWNDGSLWDLMDPM 198
           L G FS KSDVFSFGV++LE +S K+N  FY ++   +LLG+  W LW +  + +LMD  
Sbjct: 551 LDGYFSEKSDVFSFGVMVLEIISGKRNTGFYQSDQTPSLLGHA-WKLWKEEKVLELMDQT 609

Query: 199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFL 252
           L    +     R  NV L C +E+ +DRPTM   V +LS++   +P P++ AF+
Sbjct: 610 LGETCNTNEFSRCVNVGLLCVQEDPSDRPTMAIAVLLLSSDAATMPVPKEPAFV 663

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485739|ref|XP_002262617.2| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Vitis vinifera]

 Score =  213 bits (543), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/234 (49%), Positives = 153/234 (65%), Gaps = 15/234 (6%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +PFF L  I AAT+NFS  NKLG+GGF P   GK L G ++AVKRLS  SGQGL+EFKNE
Sbjct: 344 VPFFDLEDILAATENFSDANKLGQGGFEPVYKGKFLEGREIAVKRLSRASGQGLQEFKNE 403

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
           ++LIAKLQ  NLVR++G CVE   KIL+YE+M NKSLD F+F   +            YA
Sbjct: 404 VVLIAKLQHRNLVRLLGYCVEGDEKILLYEYMANKSLDSFIFVAMSPE----------YA 453

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN-SLTLLGYVIWNLWNDGSLWDLMDPM 198
           L G FS KSDVF FGV++LE +S K+N  FY ++ +L+LLG+  W LW +  + +LMD  
Sbjct: 454 LDGYFSEKSDVFCFGVMVLEIISGKRNTGFYQSDRTLSLLGHA-WKLWKEDKVLELMDQT 512

Query: 199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFL 252
           L    +     R  NV L C +E+ +DRPTM   V +LS++   +P P++ AF+
Sbjct: 513 LSETCNTNEFSRCVNVGLLCVQEDPSDRPTMAIAVLLLSSDAATVPVPKEPAFV 566

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222618440|gb|EEE54572.1| hypothetical protein OsJ_01773 [Oryza sativa Japonica Group]

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/294 (40%), Positives = 165/294 (56%), Gaps = 59/294 (20%)

Query: 15  RGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQ 71
           R + + S    F  + +  ATDNF+ EN+LG+GGFGP   G+L +G +VAVKRL+SQSGQ
Sbjct: 349 RLEERSSEFSLFEFSELLEATDNFAAENRLGQGGFGPVYKGQLHDGVEVAVKRLASQSGQ 408

Query: 72  GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGW 131
           G  EFKNE+ LIAKLQ  NLVR++GCC++   KIL+YE++PNKSLD+F+F  A +G L  
Sbjct: 409 GFTEFKNEVELIAKLQHTNLVRLLGCCIQGEEKILVYEYLPNKSLDFFIFGIA-QGLLYL 467

Query: 132 GTRVRIYALH-------------------------------------------------- 141
               R+  +H                                                  
Sbjct: 468 HKHSRLRVIHRDLKASNILLDQDMNPKISDFGLAKIFSSNNTEGNTKRVVGTYGYMSPEY 527

Query: 142 ---GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS-LTLLGYVIWNLWNDGSLWDLMDP 197
              G++SIKSDVFSFGVLLLE LS K+N+ F+     L LLGY  W++W +G   D++  
Sbjct: 528 ASEGIYSIKSDVFSFGVLLLEILSGKRNSGFHQYGDFLNLLGYA-WHMWEEGRWLDIIGA 586

Query: 198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
            +        L++Y N+ L C +ENA DRPTM ++V+MLS+E   LP P+  A+
Sbjct: 587 SIPQTIPTEGLRKYINIALMCVQENADDRPTMSDVVAMLSSESAVLPEPKHPAY 640

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087502|emb|CBI34091.3| unnamed protein product [Vitis vinifera]

 Score =  204 bits (519), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/253 (44%), Positives = 152/253 (60%), Gaps = 26/253 (10%)

Query: 26  FSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMML 82
           F   ++ AAT+NFS +NK+G+GGFG    G L +G+++A+KRLS  S QG  EFKNE++L
Sbjct: 341 FDFGTLQAATNNFSDDNKIGQGGFGDVYKGTLSSGQEIAIKRLSRSSVQGAVEFKNEIVL 400

Query: 83  IAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD-------------------- 122
           +AKLQ  NLVR++G C+E   KIL+YE++PNKSLD F+FD                    
Sbjct: 401 VAKLQHRNLVRLLGFCLEGEEKILVYEYVPNKSLDCFVFDGDMNPKISDFGMARIVGVDQ 460

Query: 123 -PANKGRL--GWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG 179
              N  R+   +G     YA+ G FS KSDV+SFGVL+LE +S KKN  FY +     L 
Sbjct: 461 TQGNTNRVVGTYGYMSPEYAMRGHFSAKSDVYSFGVLVLEIISGKKNGSFYESGQTEGLP 520

Query: 180 YVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE 239
              W LW DG+  +LMDPM+    +   + R  ++ L C +E+  DRP+M  +V MLS+ 
Sbjct: 521 SYAWKLWRDGTPLELMDPMMGDSYARNEVIRCIHMGLLCVQEDPDDRPSMASVVLMLSSY 580

Query: 240 IVNLPYPQQSAFL 252
            V LP PQQ AF 
Sbjct: 581 SVTLPLPQQPAFF 593

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|109289920|gb|ABG29323.1| Receptor protein kinase, putative [Solanum bulbocastanum]

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 158/300 (52%), Gaps = 56/300 (18%)

Query: 5   DINMGITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVA 61
           D NM    E  G+  +  +  FS   + AAT+NFS ENKLGEGGFGP   GK  +G +VA
Sbjct: 424 DTNM---KEKDGREVQD-LKIFSFGFVLAATNNFSSENKLGEGGFGPVYKGKFPDGREVA 479

Query: 62  VKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLF 121
           VKRLS  SGQGL EFKNE++LIAK+Q  NLVR++GCC+ +  K+LIYE+MPNKSLD+FLF
Sbjct: 480 VKRLSRTSGQGLVEFKNELILIAKVQHTNLVRVLGCCIHEDEKMLIYEYMPNKSLDFFLF 539

Query: 122 DPANKGRLGWGTRVRIYA--------LHG---VFSIKSDVFSFGVLLLETLSSK----KN 166
           DP  K  L W  R  I          LH    +  I  D+ +  VLL E ++ K      
Sbjct: 540 DPERKKLLDWQKRYEIIEGIAQGLLYLHKYSRMRVIHRDLKASNVLLDENMNPKIADFGM 599

Query: 167 AHFYNTNSLTLL--------GY--------------------------VIWNLWNDGSLW 192
           A  +  N    +        GY                          + W LW +G   
Sbjct: 600 ARIFKQNETEAVTARVVGTYGYMAPEFAMEGAFSIKSDVFSFGILMLEIAWELWKEGCAL 659

Query: 193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFL 252
           +L DP L       +L R  +V L C +E ATDRPTM +++SML NE + LP P+Q AF 
Sbjct: 660 ELKDPALGDLCDTKLLLRVIHVGLLCVQEGATDRPTMSDVISMLGNESMPLPTPKQPAFF 719

Source: Solanum bulbocastanum

Species: Solanum bulbocastanum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242089377|ref|XP_002440521.1| hypothetical protein SORBIDRAFT_09g002440 [Sorghum bicolor] gi|241945806|gb|EES18951.1| hypothetical protein SORBIDRAFT_09g002440 [Sorghum bicolor]

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/269 (42%), Positives = 155/269 (57%), Gaps = 31/269 (11%)

Query: 11  TTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSS 67
           + E  GK+ E   PF S   I  ATD+FS  N LG+GGFG    G L   ++VAVKRLS 
Sbjct: 128 SDETGGKNIE--FPFISFEDIVVATDHFSNSNMLGKGGFGNVYKGVLAGTKEVAVKRLSK 185

Query: 68  QSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLF------ 121
            S QG+EEFKNE++LIAKLQ  NLV++IGCC+ +  ++L+YE++PNKSLDYFLF      
Sbjct: 186 GSVQGMEEFKNEVVLIAKLQHKNLVKLIGCCIHEDERLLVYEYLPNKSLDYFLFGTFNCQ 245

Query: 122 ----------------DPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKK 165
                            P +   L  G     Y + G FS+KSD +SFGVLLLET+S  K
Sbjct: 246 FVIFVNNRQINFLRLCKPFHWNNLHSGYMAPEYVMEGSFSVKSDTYSFGVLLLETVSGLK 305

Query: 166 NAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI--LKRYSNVDLFCFRENA 223
            +  +  +   L+ Y  WNLW DG L  L+D  +  ++S PI  + R   +   C ++N 
Sbjct: 306 ISSPHLMDFPNLIAYA-WNLWEDGELEHLVDSFV-VDSSCPIDEVSRCVQIGFLCVQDNP 363

Query: 224 TDRPTMLEIVSMLSNEIVNLPYPQQSAFL 252
           + RP M E+VSML N    LP P+Q ++ 
Sbjct: 364 SSRPFMAEVVSMLENRTTPLPTPKQPSYF 392

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575982|ref|XP_002528887.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis] gi|223531686|gb|EEF33511.1| S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/257 (43%), Positives = 158/257 (61%), Gaps = 41/257 (15%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +P F L++I  ATD+F+  NKLGEGGFG    G L +G+++AVKRLS  SGQG  EFKNE
Sbjct: 487 LPVFDLSTIIKATDDFASYNKLGEGGFGIVYKGTLADGQEIAVKRLSESSGQGSTEFKNE 546

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-- 137
           ++LI++LQ  NLV+++GCC++   K+LIYE+MPNKSLD+F+F            RVR+  
Sbjct: 547 VILISELQHRNLVKLLGCCIQNDEKMLIYEYMPNKSLDFFIF-----------VRVRLFL 595

Query: 138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN-SL 175
                                YA+ G+FS+KSDVFSFGVL+LE ++ KKN  F++ + + 
Sbjct: 596 TEYLPNQLKSLLFRSGYMSPEYAVDGLFSMKSDVFSFGVLVLEIVNGKKNRGFFHPDHNH 655

Query: 176 TLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM 235
            LLG+  W LW +    +L+D  L + A  P + R  +V L C ++   DRP M  ++ M
Sbjct: 656 NLLGHA-WKLWIEEKALELVDKTLDSYA-LPEILRCIHVGLLCVQQRPEDRPNMASVIVM 713

Query: 236 LSNEIVNLPYPQQSAFL 252
           LS+E  +LP P+Q  F 
Sbjct: 714 LSSE-CSLPEPRQPGFF 729

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359480371|ref|XP_003632440.1| PREDICTED: LOW QUALITY PROTEIN: putative serine/threonine-protein kinase receptor-like [Vitis vinifera]

 Score =  193 bits (491), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/281 (42%), Positives = 154/281 (54%), Gaps = 52/281 (18%)

Query: 23  IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
           +  FS  SI  A++NFS ENKLGEGGFGP   GKL  G+++AVKRLS  SGQGL EFKNE
Sbjct: 359 LKLFSFDSIVVASNNFSSENKLGEGGFGPVYKGKLPEGQEIAVKRLSRGSGQGLVEFKNE 418

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
           + LIA+LQ +NLVR++GCC++   K+LIYE MPNKSLD+FLFDPA +  L W  R  I  
Sbjct: 419 IRLIARLQHMNLVRLLGCCIKGEEKMLIYEFMPNKSLDFFLFDPAXRKILDWKRRHNIIE 478

Query: 140 --------LHGVFS---IKSDVFSFGVLLLETLSSK-----------KNAHFYNTNSL-- 175
                   LH       I  D+ +  +LL   L+ K           +NA   NTN +  
Sbjct: 479 GIAQGLLYLHKYSRLRIIHRDLKASNILLDHDLNPKISDFGMARTFGRNASEANTNRIVG 538

Query: 176 -------------------------TLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKR 210
                                     LL  + W LW +G+   L+DPML+   S   + R
Sbjct: 539 TYGYMPPEYAMEGIFSVKSDVYSFGVLLLEIAWELWKEGTSLQLVDPMLEDFHSSTQMLR 598

Query: 211 YSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             ++ L C +E+A DRPTM  ++SML+NE V LP P   AF
Sbjct: 599 CIHIALLCVQESAADRPTMSAVISMLTNETVPLPNPNLPAF 639

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	253
TAIR|locus:2093397	850	CES101 "CALLUS EXPRESSION OF R	0.521	0.155	0.597	1.3e-55
TAIR|locus:2018546	843	RK1 "receptor kinase 1" [Arabi	0.521	0.156	0.507	1.2e-53
UNIPROTKB|O49974	848	KIK1 "Serine/threonine-protein	0.474	0.141	0.608	1.6e-52
TAIR|locus:2121676	669	CRK10 "cysteine-rich RLK (RECE	0.474	0.179	0.528	2.6e-52
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.442	0.133	0.582	2.7e-52
TAIR|locus:2018506	847	RK2 "receptor kinase 2" [Arabi	0.513	0.153	0.496	4.1e-52
TAIR|locus:2141181	850	RK3 "receptor kinase 3" [Arabi	0.470	0.14	0.516	6.3e-51
TAIR|locus:2123126	666	CRK31 "cysteine-rich RLK (RECE	0.442	0.168	0.573	6.9e-51
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.498	0.148	0.530	8.3e-51
TAIR|locus:2123111	669	CRK34 "cysteine-rich RLK (RECE	0.490	0.185	0.558	1.3e-50

TAIR|locus:2093397 CES101 "CALLUS EXPRESSION OF RBCS 101" [Arabidopsis thaliana (taxid:3702)]

 Score = 398 (145.2 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
 Identities = 83/139 (59%), Positives = 100/139 (71%)

Query:     6 INMGITTEARGK----SKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGE 58
             + +GI    RGK    +  + +  FS  S++ ATD FS  NKLGEGGFGP   G+L++GE
Sbjct:   491 LELGIERRRRGKRSARNNNNELQIFSFESVAFATDYFSDANKLGEGGFGPVYKGRLIDGE 550

Query:    59 QVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDY 118
             +VA+KRLS  SGQGL EFKNE MLIAKLQ  NLV+++GCCVEK  K+LIYE+MPNKSLDY
Sbjct:   551 EVAIKRLSLASGQGLVEFKNEAMLIAKLQHTNLVKLLGCCVEKDEKMLIYEYMPNKSLDY 610

Query:   119 FLFDPANKGRLGWGTRVRI 137
             FLFDP  K  L W  R RI
Sbjct:   611 FLFDPLRKIVLDWKLRFRI 629

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

TAIR|locus:2018546 RK1 "receptor kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
 Identities = 70/138 (50%), Positives = 97/138 (70%)

Query:     9 GITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRL 65
             G T++ + KS+   +P   L +++ AT+NFS +NKLG+GGFG    G+LL+G+++AVKRL
Sbjct:   491 GYTSKEK-KSEYLELPLLELEALATATNNFSNDNKLGQGGFGIVYKGRLLDGKEIAVKRL 549

Query:    66 SSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPAN 125
             S  S QG +EF NE+ LIAKLQ INLVR++GCCV+KG K+LIYE++ N SLD  LFD   
Sbjct:   550 SKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTR 609

Query:   126 KGRLGWGTRVRIYALHGV 143
                L W  R  I  ++G+
Sbjct:   610 SSNLNWQKRFDI--INGI 625

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0009875 "pollen-pistil interaction" evidence=TAS

GO:0016020 "membrane" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

UNIPROTKB|O49974 KIK1 "Serine/threonine-protein kinase" [Zea mays (taxid:4577)]

 Score = 358 (131.1 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
 Identities = 76/125 (60%), Positives = 89/125 (71%)

Query:    16 GKSKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQG 72
             GKS E  +  +SL  I  AT NFS  NKLGEGGFGP   G L  GE+VAVKRL   SGQG
Sbjct:   510 GKSHE--LKVYSLDRIRTATSNFSDSNKLGEGGFGPVYMGTLPGGEEVAVKRLCRNSGQG 567

Query:    73 LEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWG 132
             LEEFKNE++LIAKLQ  NLVR++GCC+ +  KIL+YE+MPNKSLD FLF+P  +  L W 
Sbjct:   568 LEEFKNEVILIAKLQHRNLVRLLGCCIPREEKILVYEYMPNKSLDAFLFNPEKQRLLDWK 627

Query:   133 TRVRI 137
              R  I
Sbjct:   628 KRFDI 632

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2121676 CRK10 "cysteine-rich RLK (RECEPTOR-like protein kinase) 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 331 (121.6 bits), Expect = 2.6e-52, Sum P(2) = 2.6e-52
 Identities = 66/125 (52%), Positives = 88/125 (70%)

Query:    30 SISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL 86
             +I  ATD+F   NK+G+GGFG    G L +G +VAVKRLS  SGQG  EFKNE++L+AKL
Sbjct:   340 TIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKL 399

Query:    87 QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--LHGVF 144
             Q  NLVR++G C++   ++L+YE++PNKSLDYFLFDPA KG+L W  R +I      G+ 
Sbjct:   400 QHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGIL 459

Query:   145 SIKSD 149
              +  D
Sbjct:   460 YLHQD 464

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 351 (128.6 bits), Expect = 2.7e-52, Sum P(2) = 2.7e-52
 Identities = 67/115 (58%), Positives = 87/115 (75%)

Query:    23 IPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
             +P FS  S+++AT +F+ ENKLG+GGFG    G    G ++AVKRLS +S QGLEEFKNE
Sbjct:   510 LPIFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNE 569

Query:    80 MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTR 134
             ++LIAKLQ  NLVR++GCC+E   K+L+YE+MPNKSLD FLFD + +G L W  R
Sbjct:   570 ILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGSLDWRKR 624

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2018506 RK2 "receptor kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 328 (120.5 bits), Expect = 4.1e-52, Sum P(2) = 4.1e-52
 Identities = 67/135 (49%), Positives = 90/135 (66%)

Query:    12 TEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQ 68
             T    K+    +P     +++ AT+NFS +NKLG+GGFG    G LL+G+++AVKRLS  
Sbjct:   497 TSKENKTDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKM 556

Query:    69 SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGR 128
             S QG +EF NE+ LIAKLQ INLVR++GCCV+KG K+LIYE++ N SLD  LFD      
Sbjct:   557 SSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSN 616

Query:   129 LGWGTRVRIYALHGV 143
             L W  R  I  ++G+
Sbjct:   617 LNWQKRFDI--INGI 629

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0034613 "cellular protein localization" evidence=IGI

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

TAIR|locus:2141181 RK3 "receptor kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 320 (117.7 bits), Expect = 6.3e-51, Sum P(2) = 6.3e-51
 Identities = 64/124 (51%), Positives = 87/124 (70%)

Query:    23 IPFFSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNE 79
             +P      ++ AT+NFS  NKLG+GGFG    GKLL+G+++AVKRLS  S QG +EFKNE
Sbjct:   511 LPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAVKRLSKTSVQGTDEFKNE 570

Query:    80 MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
             + LIA+LQ INLVR++ CCV+ G K+LIYE++ N SLD  LFD +   +L W  R  I  
Sbjct:   571 VKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFDKSRNSKLNWQMRFDI-- 628

Query:   140 LHGV 143
             ++G+
Sbjct:   629 INGI 632

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0005773 "vacuole" evidence=IDA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=RCA

TAIR|locus:2123126 CRK31 "cysteine-rich RLK (RECEPTOR-like protein kinase) 31" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 6.9e-51, Sum P(2) = 6.9e-51
 Identities = 66/115 (57%), Positives = 83/115 (72%)

Query:    26 FSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMML 82
             F   +I  ATDNFS  NKLG+GGFG    G L N  ++AVKRLSS SGQG +EFKNE+++
Sbjct:   327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLSSNSGQGTQEFKNEVVI 386

Query:    83 IAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
             +AKLQ  NLVR++G C+E+  +IL+YE + NKSLDYFLFDP  K +L W  R  I
Sbjct:   387 VAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNI 441

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 350 (128.3 bits), Expect = 8.3e-51, Sum P(2) = 8.3e-51
 Identities = 70/132 (53%), Positives = 97/132 (73%)

Query:    16 GKS-KESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQ 71
             GK+   S +P FSL +I+ AT++F  EN+LG GGFGP   G L +G ++AVKRLS +SGQ
Sbjct:   506 GKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQ 565

Query:    72 GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGW 131
             G++EFKNE++LIAKLQ  NLVR++GCC E   K+L+YE+MPNKSLD+FLFD   +  + W
Sbjct:   566 GVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDW 625

Query:   132 GTRVRIYALHGV 143
               ++R   + G+
Sbjct:   626 --KLRFSIIEGI 635

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2123111 CRK34 "cysteine-rich RLK (RECEPTOR-like protein kinase) 34" [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 1.3e-50, Sum P(2) = 1.3e-50
 Identities = 72/129 (55%), Positives = 87/129 (67%)

Query:    26 FSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMML 82
             FS  +I AATD FS  N +G GGFG    GKL +G +VAVKRLS  SGQG EEFKNE +L
Sbjct:   333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKLSSGPEVAVKRLSKTSGQGAEEFKNEAVL 392

Query:    83 IAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--L 140
             ++KLQ  NLVR++G C+E   KIL+YE +PNKSLDYFLFDPA +G L W  R  I     
Sbjct:   393 VSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIA 452

Query:   141 HGVFSIKSD 149
              G+  +  D
Sbjct:   453 RGILYLHQD 461

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	253
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	3e-15
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-12
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-11
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-08
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-08
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	6e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	9e-08
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	3e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-07
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-07
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-07
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-06
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-06
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-06
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-06
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-06
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	5e-06
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	5e-06
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	6e-06
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-06
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-05
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-05
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-05
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	4e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	5e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	6e-05
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	8e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-04
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	1e-04
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-04
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	2e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-04
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	2e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	3e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	6e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	8e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	9e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	9e-04
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	9e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	9e-04
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.001
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.002
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.004
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.004

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 72.6 bits (179), Expect = 3e-15
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 11/108 (10%)

Query: 39  SMENKLGEGGFG--------PGKLLNGEQVAVKRL-SSQSGQGLEEFKNEMMLIAKLQDI 89
           ++  KLGEG FG                +VAVK L    S Q +EEF  E  ++ KL   
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 90  NLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           N+V+++G C E+    ++ E+M    L  +L    N+ +L     +  
Sbjct: 62  NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYL--RKNRPKLSLSDLLSF 107

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 70.3 bits (173), Expect = 2e-14
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 9/91 (9%)

Query: 39  SMENKLGEGGFG--------PGKLLNGEQVAVKRL-SSQSGQGLEEFKNEMMLIAKLQDI 89
           ++  KLGEG FG                +VAVK L    S Q +EEF  E  ++ KL   
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHP 61

Query: 90  NLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           N+V+++G C E+   +++ E+MP   L  +L
Sbjct: 62  NIVKLLGVCTEEEPLMIVMEYMPGGDLLDYL 92

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 64.4 bits (158), Expect = 2e-12
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 11/109 (10%)

Query: 38  FSMENKLGEGGFG--------PGKLLNGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQD 88
             +  KLGEG FG                +VAVK L   +  +  EEF  E  ++ KL  
Sbjct: 1   LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSH 60

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
            N+VR++G C +     ++ E+MP   L  FL    +  +L     +++
Sbjct: 61  PNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFL--RKHGEKLTLKDLLQM 107

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 62.2 bits (152), Expect = 1e-11
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 14/110 (12%)

Query: 42  NKLGEGGFGP---GKLLNGE----QVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVR 93
            KLGEG FG    GKL   +    +VAVK L    S +  ++F  E  ++ KL   N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 94  IIGCCVEKGVKILIYEHMPNKSLDYFL------FDPANKGRLGWGTRVRI 137
           ++G C E+    L+ E+M    L  +L      F    K  L     +  
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSF 110

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 11/101 (10%)

Query: 44  LGEGGFGPGK------LLNGEQVAVKRLS-SQSGQGLEEFKNEMMLIAKLQDINLVRIIG 96
           LGEGGFG            G++VA+K +    S   LEE   E+ ++ KL   N+V++ G
Sbjct: 1   LGEGGFG--TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYG 58

Query: 97  CCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
              ++    L+ E+    SL   L +  N+G+L     +RI
Sbjct: 59  VFEDENHLYLVMEYCEGGSLKDLLKE--NEGKLSEDEILRI 97

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 13/106 (12%)

Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLS-SQSGQGLEEFKNEMMLIAKLQDINLV 92
            +LGEG FG        P     GEQVAVK L+ S   Q   +F+ E+ ++  L   N+V
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIV 69

Query: 93  RIIGCCVEKGVKI--LIYEHMPNKSLDYFLFDPANKGRLGWGTRVR 136
           +  G C + G +   LI E++P+ SL  +L    ++ ++     + 
Sbjct: 70  KYKGVCEKPGGRSLRLIMEYLPSGSLRDYL--QRHRDQINLKRLLL 113

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 53.0 bits (127), Expect = 3e-08
 Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 25/138 (18%)

Query: 40  MENKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEE-FKNEMMLIAKLQDIN 90
               LGEG FG        P     GE VAVK L  + GQ     +K E+ ++  L   N
Sbjct: 8   KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHEN 67

Query: 91  LVRIIGCCVEKGVKI--LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--------- 139
           +V+  GCC E+G K   LI E++P  SL  +L  P +K  L    ++ ++A         
Sbjct: 68  IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL--PKHKLNL---AQLLLFAQQICEGMAY 122

Query: 140 LHGVFSIKSDVFSFGVLL 157
           LH    I  D+ +  VLL
Sbjct: 123 LHSQHYIHRDLAARNVLL 140

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 10/87 (11%)

Query: 44  LGEGGFG---------PGKLLNGEQVAVKRL-SSQSGQGLEEFKNEMMLIAKLQDINLVR 93
           LGEG FG         P + L+   VA+K L  +   +  +EF+ E  L++ LQ  N+V 
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVC 72

Query: 94  IIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++G C ++    +++E++ +  L  FL
Sbjct: 73  LLGVCTKEQPTCMLFEYLAHGDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 51.3 bits (123), Expect = 9e-08
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ------VAVKRLSSQSGQGLEE-FKNEMMLIAK 85
           D   ++ +LGEG FG    G+  + E       VAVK L   +     + F+ E  L+  
Sbjct: 5   DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTN 64

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
            Q  N+V+  G C E    I+++E+M +  L+ FL
Sbjct: 65  FQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFL 99

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 50.1 bits (119), Expect = 3e-07
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)

Query: 37  NFSMENKLGEGGFGPGKL-----LNGEQ----VAVKRLSSQSGQGLEEFKNEMMLIAKLQ 87
           N  ++ +LGEG FG   L     L  EQ    VAVK L   S    ++F  E  L+  LQ
Sbjct: 6   NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 65

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             ++V+  G CVE    I+++E+M +  L+ FL
Sbjct: 66  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)

Query: 38  FSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRI 94
           F++E KLG G FG    G   N  +VA+K L S      ++F+ E+  + +L+  +L+ +
Sbjct: 8   FTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 95  IGCCVEKGVKILIYEHMPNKSLDYFLFDPANK 126
              C       +I E M   SL  FL  P  +
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQ 99

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 48.7 bits (117), Expect = 7e-07
 Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 29/103 (28%)

Query: 141 HGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD 193
            G F+ KSDV+SFGVLL E  +          NA           GY             
Sbjct: 178 EGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLE---YLKKGYR------------ 222

Query: 194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
           L  P       Y ++ +       C+ E+  DRPT  E+V +L
Sbjct: 223 LPKPPNCPPELYKLMLQ-------CWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 48.4 bits (116), Expect = 8e-07
 Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 9/101 (8%)

Query: 43  KLGEGGFGP---GKLLN-GEQVAVKRL--SSQSGQGLEEFKNEMMLIAKLQDINLVRIIG 96
           KLG G FG     K    G+ VAVK L   S+  +  +  + E+ ++ +L   N+VR+I 
Sbjct: 6   KLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLID 65

Query: 97  CCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
              +K    L+ E+     L  +L   +  G L      +I
Sbjct: 66  AFEDKDHLYLVMEYCEGGDLFDYL---SRGGPLSEDEAKKI 103

Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 28/103 (27%), Positives = 38/103 (36%), Gaps = 29/103 (28%)

Query: 141 HGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD 193
            G F+ KSDV+SFGVLL E  +          N            GY             
Sbjct: 177 EGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLE---YLKNGYR------------ 221

Query: 194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
           L  P       Y ++ +       C+ E+  DRPT  E+V +L
Sbjct: 222 LPQPPNCPPELYDLMLQ-------CWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 12/96 (12%)

Query: 36  DNFSMENKLGEGGFG-------PGKLLNGEQ---VAVKRLSSQ-SGQGLEEFKNEMMLIA 84
           +N      +G+G FG       PG LL  E    VAVK L  + S     +F+ E  L+A
Sbjct: 5   NNIEYVRDIGQGAFGRVFQARAPG-LLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 63

Query: 85  KLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           +    N+V+++G C       L++E+M    L+ FL
Sbjct: 64  EFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 99

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 16/110 (14%)

Query: 44  LGEGGFGPGKLL--------NGEQVAVKRLSSQSGQG-LEEFKNEMMLIAKLQDINLVRI 94
           LGEG FG  +L          GEQVAVK L  +SG   + + K E+ ++  L   N+V+ 
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 95  IGCCVE---KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALH 141
            G C E    G+K LI E +P+ SL  +L  P NK ++    +++ YA+ 
Sbjct: 72  KGICTEDGGNGIK-LIMEFLPSGSLKEYL--PRNKNKINLKQQLK-YAVQ 117

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 9/90 (10%)

Query: 38  FSMENKLGEGGFGPGK------LLNGEQVAVKRLS-SQSGQGLEEFKNEMMLIAKLQDIN 90
           + +  KLGEG FG  K         G+ VA+K +   +  +  E    E+ ++ KL+  N
Sbjct: 1   YEILEKLGEGSFG--KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPN 58

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           +VR+     ++    L+ E+     L   L
Sbjct: 59  IVRLYDVFEDEDKLYLVMEYCEGGDLFDLL 88

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 46.7 bits (111), Expect = 3e-06
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 14/101 (13%)

Query: 32  SAATDNFSMENKLGEGGFGPGKLLNGE-----------QVAVKRL-SSQSGQGLEEFKNE 79
               D+ ++   LG G FG  ++  G            QVAVK L  S S Q   +F  E
Sbjct: 2   EVPRDSITLLRALGHGAFG--EVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLME 59

Query: 80  MMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
            ++++K    N+VR+IG   E+  + ++ E M    L  FL
Sbjct: 60  ALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFL 100

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 46.4 bits (111), Expect = 4e-06
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 11/101 (10%)

Query: 37  NFSMENKLGEGGFGP---GKLL-NGEQVAVK--RLSSQSGQGLEEFKNEMMLIAKLQDIN 90
            ++    LG G FG          GE +AVK   LS  S + LE  + E+ +++ LQ  N
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPN 60

Query: 91  LVRIIGCCVEKGVK-ILIY-EHMPNKSLDYFLFDPANKGRL 129
           +VR  G   ++    + I+ E++   SL   L      G+L
Sbjct: 61  IVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL---KKFGKL 98

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 46.1 bits (109), Expect = 5e-06
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)

Query: 43  KLGEGGFGPGKL-----LNGEQ----VAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
           +LGEG FG   L     L  EQ    VAVK L   S    ++F+ E  L+  LQ  ++VR
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVR 71

Query: 94  IIGCCVEKGVKILIYEHMPNKSLDYFL 120
             G C E    ++++E+M +  L+ FL
Sbjct: 72  FYGVCTEGRPLLMVFEYMRHGDLNRFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 46.2 bits (110), Expect = 5e-06
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 21/99 (21%)

Query: 43  KLGEGGFG----------PGKLLNGE----------QVAVKRL-SSQSGQGLEEFKNEMM 81
           KLGEG FG                             VAVK L    S    E+F  E+ 
Sbjct: 12  KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVK 71

Query: 82  LIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++++L D N+ R++G C       +I E+M N  L+ FL
Sbjct: 72  ILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 46.0 bits (110), Expect = 6e-06
 Identities = 33/124 (26%), Positives = 45/124 (36%), Gaps = 39/124 (31%)

Query: 128 RLGWGTRVRI--YAL----HGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNS 174
           R   G ++ I   A      G F+ KSDV+SFGVLL E  +          N        
Sbjct: 159 RKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLE--- 215

Query: 175 LTLL--GYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEI 232
             LL  GY             L  P    +  Y ++ +       C+  +  DRPT  E+
Sbjct: 216 --LLEDGYR------------LPRPENCPDELYELMLQ-------CWAYDPEDRPTFSEL 254

Query: 233 VSML 236
           V  L
Sbjct: 255 VEDL 258

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 45.6 bits (109), Expect = 8e-06
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 19/98 (19%)

Query: 141 HGVFSIKSDVFSFGVLLLE--TLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM 198
            G+F+ KSDV+SFGVLL E  TL +     +   ++  +L Y+       G    L  P 
Sbjct: 181 DGIFTSKSDVWSFGVLLWEIFTLGATP---YPGLSNEEVLEYLR-----KGYR--LPKPE 230

Query: 199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
              +  Y ++         C++ +  DRPT  E+V  L
Sbjct: 231 YCPDELYELMLS-------CWQLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 45.3 bits (107), Expect = 1e-05
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 21/106 (19%)

Query: 36  DNFSMENKLGEGGFGPGKLLNGEQ--------------------VAVKRLSSQSGQGLE- 74
              + + KLGEG FG   L   E                     VAVK L   + +    
Sbjct: 5   KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARN 64

Query: 75  EFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           +F  E+ ++++L+D N++R++  C+      +I E+M N  L+ FL
Sbjct: 65  DFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 10/87 (11%)

Query: 44  LGEGGFGPGKLL--------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRII 95
           LG+G FG  +L          GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+  
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71

Query: 96  GCCVEKGVK--ILIYEHMPNKSLDYFL 120
           G C   G +   L+ E++P  SL  +L
Sbjct: 72  GVCYSAGRRNLRLVMEYLPYGSLRDYL 98

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 49/149 (32%), Positives = 64/149 (42%), Gaps = 42/149 (28%)

Query: 103 VKI-------LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA----LHGVFSIKSDVF 151
           VKI        IYE       DY+      KG L     VR  A      GVF+ KSDV+
Sbjct: 158 VKIGDFGMTRDIYET------DYY--RKGGKGLL----PVRWMAPESLKDGVFTTKSDVW 205

Query: 152 SFGVLLLE--TLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILK 209
           SFGV+L E  TL+ +      N     +L +VI     DG   DL  P    +    +++
Sbjct: 206 SFGVVLWEMATLAEQPYQGLSNEE---VLKFVI-----DGGHLDL--PENCPDKLLELMR 255

Query: 210 RYSNVDLFCFRENATDRPTMLEIVSMLSN 238
                   C++ N   RPT LEIVS L +
Sbjct: 256 M-------CWQYNPKMRPTFLEIVSSLKD 277

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 37  NFSMENKLGEGGFGP-GKLLN---GEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDIN 90
           N+ + + +G G FG   K LN   G+ VA+K++S +    + L+    E+ L+  L+  N
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSL 116
           +V+ IG         +I E+  N SL
Sbjct: 61  IVKYIGSIETSDSLYIILEYAENGSL 86

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 12/118 (10%)

Query: 36  DNFSMENKLGEGGFGP---GKL-LNGEQ---VAVKRLSSQ-SGQGLEEFKNEMMLIAKLQ 87
              ++E  +G G FG    G+L L G++   VA+K L +  S +   +F  E  ++ +  
Sbjct: 4   SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD 63

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFS 145
             N++R+ G   +    ++I E+M N SLD FL +  N G+   G  V +  L G+ S
Sbjct: 64  HPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRE--NDGKFTVGQLVGM--LRGIAS 117

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 43.4 bits (102), Expect = 5e-05
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 19/100 (19%)

Query: 40  MENKLGEGGFGPGKLLNGE------------------QVAVKRLSSQ-SGQGLEEFKNEM 80
           ++ KLGEG FG   L   E                   VAVK L +  +     +F  E+
Sbjct: 9   LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI 68

Query: 81  MLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
            ++++L++ N++R++G CV      +I E+M N  L+ FL
Sbjct: 69  KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFL 108

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 12/96 (12%)

Query: 44  LGEGGFG--------PGKLLNGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQDINLVRI 94
           LG G FG        P        VA+K L  ++  +  +E  +E  ++A +   ++VR+
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 95  IGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLG 130
           +G C+   V+ LI + MP   L  ++ +  +K  +G
Sbjct: 75  LGICLSSQVQ-LITQLMPLGCLLDYVRN--HKDNIG 107

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 42.7 bits (100), Expect = 8e-05
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 13/92 (14%)

Query: 40  MENKLGEGGFGPGKLLNGE-----------QVAVKRLSSQSGQGLEEFKNEMMLIAKLQD 88
           ++ +LGEG FG  K+   E            VAVK L   +    ++F+ E  L+  LQ 
Sbjct: 9   LKRELGEGAFG--KVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH 66

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
            ++V+  G C +    I+++E+M +  L+ FL
Sbjct: 67  EHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 98

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 14/21 (66%), Positives = 18/21 (85%)

Query: 139 ALHGVFSIKSDVFSFGVLLLE 159
           A +G F+IKSDV+SFG+LL E
Sbjct: 176 ANYGRFTIKSDVWSFGILLTE 196

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 38  FSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRI 94
             +E KLG G FG    G      +VAVK L   +    E F  E  ++ KL+   LV++
Sbjct: 8   LKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQL 66

Query: 95  IGCCVEKGVKILIYEHMPNKSLDYFLFDP 123
              C E+    ++ E+M   SL  FL   
Sbjct: 67  YAVCSEEEPIYIVTEYMSKGSLLDFLKSG 95

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
              ++  ++G G FG    G  L   +VA+K +  +     E+F  E  ++ KL    LV
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIR-EGAMSEEDFIEEAQVMMKLSHPKLV 62

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++ G C E+    L++E M +  L  +L
Sbjct: 63  QLYGVCTERSPICLVFEFMEHGCLSDYL 90

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 44  LGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE 100
           LG G FG    GK      VA+K +   +    ++F  E  ++ KL   NLV++ G C +
Sbjct: 12  LGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTK 70

Query: 101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGW 131
           +    ++ E+M N  L  +L +   K    W
Sbjct: 71  QRPIFIVTEYMANGCLLNYLRERKGKLGTEW 101

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 4/92 (4%)

Query: 43  KLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGL-EEFKNEMMLIAKLQDINLVRIIGCC 98
           K+G+G FG    G L    +VAVK   S     L  +F  E  ++ +    N+V++IG C
Sbjct: 2   KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC 61

Query: 99  VEKGVKILIYEHMPNKSLDYFLFDPANKGRLG 130
           V+K    ++ E +P  SL  FL    N+  + 
Sbjct: 62  VQKQPIYIVMELVPGGSLLTFLRKKKNRLTVK 93

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 15/98 (15%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ 200
           +G F+IKSDV+SFG+LL E ++  +  +   TN       VI NL      + +  P   
Sbjct: 177 YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQNL---ERGYRMPRPDNC 228

Query: 201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
            E  Y +++        C++E   +RPT   + S+L +
Sbjct: 229 PEELYELMRL-------CWKEKPEERPTFEYLRSVLED 259

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 14/95 (14%)

Query: 144 FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA 203
           FS KSDV+SFGVL+ E  +  +   +  ++   L      N    G L +L  P      
Sbjct: 195 FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVL------NRLQAGKL-ELPVPEGCPSR 247

Query: 204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
            Y ++ R       C+  N  DRP+  E+VS L  
Sbjct: 248 LYKLMTR-------CWAVNPKDRPSFSELVSALGE 275

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 21/99 (21%)

Query: 43  KLGEGGFG------------------PGKLLNGEQ--VAVKRLSSQSGQGLE-EFKNEMM 81
           KLGEG FG                  P  +  G    VAVK L   + +    +F  E+ 
Sbjct: 12  KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVK 71

Query: 82  LIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++++L+D N++R++G CV++    +I E+M N  L+ FL
Sbjct: 72  ILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFL 110

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 12/100 (12%)

Query: 31  ISAATDNFSMENKLGEGGFGP---GKLLN---GEQ---VAVKRLSSQSGQGL-EEFKNEM 80
           I+ +T  F ME +LGE  FG    G L     GEQ   VA+K L  ++   L EEFK+E 
Sbjct: 2   INLSTVRF-ME-ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEA 59

Query: 81  MLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           M+ ++LQ  N+V ++G   ++    +I+ +  +  L  FL
Sbjct: 60  MMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFL 99

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 44  LGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK 101
           +G+G FG   L    G++VAVK L   S    + F  E  ++  L+  NLV+++G  ++ 
Sbjct: 14  IGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQG 72

Query: 102 GVKILIYEHMPNKSL-DY 118
               ++ E+M   SL DY
Sbjct: 73  NPLYIVTEYMAKGSLVDY 90

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 41.0 bits (96), Expect = 3e-04
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 15/91 (16%)

Query: 144 FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA 203
           FS KSDV++FGVL+ E  S  K  +    NS T+   V   L        L  P L +E 
Sbjct: 178 FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVE-KVSQGL-------RLYRPHLASEK 229

Query: 204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS 234
            Y I+  YS     C+ E A +RPT  +++S
Sbjct: 230 VYAIM--YS-----CWHEKAEERPTFQQLLS 253

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 30/101 (29%), Positives = 41/101 (40%), Gaps = 23/101 (22%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL----LGYVIWNLWNDGSLWDLM 195
            +  FS KSDV+SFGVL+ E  S  K  +   +NS  +     GY             L 
Sbjct: 174 DYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR------------LY 221

Query: 196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
            P L     Y I+         C+ E   DRP   +++S L
Sbjct: 222 RPKLAPTEVYTIMYS-------CWHEKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 5/94 (5%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           +   +  KLG G FG    G      +VA+K L   S    E F  E  L+ +LQ   LV
Sbjct: 6   ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLV 64

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANK 126
           R+     ++ + I I E+M N SL  FL  P   
Sbjct: 65  RLYAVVTQEPIYI-ITEYMENGSLVDFLKTPEGI 97

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 10/87 (11%)

Query: 44  LGEGGFG-------PGKLLNGEQ--VAVKRLSSQSGQGLE-EFKNEMMLIAKLQDINLVR 93
           LG G FG        G    G +  V VK L     + L+ EF+ E+ +  KL   N+VR
Sbjct: 13  LGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVR 72

Query: 94  IIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++G C E     +I E+     L  FL
Sbjct: 73  LLGLCREAEPHYMILEYTDLGDLKQFL 99

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 39.3 bits (92), Expect = 9e-04
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 9/89 (10%)

Query: 42  NKLGEGGFGP---GKLL--NGEQ--VAVKRLS-SQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG G FG    G  L  +G++  VAVK L       G +EF  E  ++A+L    +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 94  IIGCCVEKGVKILIYEHMPNKSLDYFLFD 122
           +IG C  + + +L+ E  P   L  +L  
Sbjct: 61  LIGVCKGEPL-MLVMELAPLGPLLKYLKK 88

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 39.5 bits (92), Expect = 9e-04
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 11/88 (12%)

Query: 44  LGEGGFGP---GKLLN------GEQ-VAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLV 92
           LG G FG    G   +      G   VAVK L   +  Q  +EF  E  L++     N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           +++G C+    + +I E M    L  +L
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYL 90

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 39.4 bits (92), Expect = 9e-04
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 39  SMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRI 94
           +M++KLG G +G             VAVK L   +   +EEF  E  ++ +++  NLV++
Sbjct: 9   TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQL 67

Query: 95  IGCCVEKGVKILIYEHMPNKSLDYFL 120
           +G C  +    +I E M   +L  +L
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYL 93

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 39.6 bits (92), Expect = 9e-04
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 15/99 (15%)

Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D   + 
Sbjct: 196 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPDNCPE- 248

Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI 240
                   R +++   C++ N   RPT LEIV++L +++
Sbjct: 249 --------RVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 15/24 (62%), Positives = 18/24 (75%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLS 162
           A HG FS KSDV+SFG+LL E  +
Sbjct: 176 ASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 117 DYFLFDPANKGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLT 176
           DY+    A +  L W     I   +G FS KSDV+S+GV L E  S    A  Y      
Sbjct: 150 DYYRATTAGRWPLKWYAPECIN--YGKFSSKSDVWSYGVTLWEAFS--YGAKPYG----E 201

Query: 177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
           + G  +  +   G    L  P    +  Y I+         C++    DRPT  E+ S  
Sbjct: 202 MKGAEVIAMLESGE--RLPRPEECPQEIYSIMLS-------CWKYRPEDRPTFSELESTF 252

Query: 237 SNEIV 241
             +  
Sbjct: 253 RRDPE 257

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 14/101 (13%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML 199
            + V++ +SDV+S+G+LL E  S   N +         +    + L  +G  + +  P  
Sbjct: 216 FNCVYTFESDVWSYGILLWEIFSLGSNPY-----PGMPVDSKFYKLIKEG--YRMAQPEH 268

Query: 200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI 240
                Y I+K        C+  +   RPT  +IV ++  ++
Sbjct: 269 APAEIYDIMKT-------CWDADPLKRPTFKQIVQLIGKQL 302

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 37.3 bits (86), Expect = 0.004
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 27/104 (25%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDLMD 196
            G F+IKSDV+SFG+LL E ++  K  +   +NS  +     GY +              
Sbjct: 178 FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM-------------- 223

Query: 197 PMLQT--EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           P ++   +  Y I+K        C++E A +RPT   + S+L +
Sbjct: 224 PRMENCPDELYDIMKT-------CWKEKAEERPTFDYLQSVLDD 260

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	253
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.98
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.97
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.96
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.96
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.96
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.96
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.96
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.96
PHA02988	283	hypothetical protein; Provisional	99.96
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.96
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.95
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.95
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.95
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.95
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.95
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.95
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.95
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.95
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.95
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.95
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.95
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.95
KOG0589	426	consensus Serine/threonine protein kinase [General	99.95
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.94
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.94
KOG0578	550	consensus p21-activated serine/threonine protein k	99.94
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.94
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.94
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.94
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.94
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.94
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.94
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.94
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.94
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.93
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.93
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.93
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.93
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.93
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.93
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.93
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.93
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.93
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.93
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.93
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.93
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.93
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.93
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.93
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.93
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.93
KOG0198	313	consensus MEKK and related serine/threonine protei	99.93
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.93
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.93
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.93
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.93
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.93
KOG0605	550	consensus NDR and related serine/threonine kinases	99.93
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.93
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.93
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.93
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.93
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.92
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.92
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.92
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.92
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.92
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.92
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.92
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.92
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.92
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.92
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.92
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.92
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.92
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.92
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.92
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.92
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.92
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.92
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.92
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.92
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.92
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.92
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.92
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.92
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.92
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.92
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.92
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.92
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.92
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.92
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.92
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.92
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.92
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.92
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.92
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.92
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.91
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.91
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.91
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.91
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.91
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.91
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.91
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.91
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.91
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.91
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.91
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.91
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.91
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.91
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.91
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.91
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.91
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.91
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.91
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.91
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.91
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.91
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.91
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.91
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.91
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.91
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.91
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.91
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.91
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.91
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.91
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.91
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.91
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.91
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.91
PTZ00267	478	NIMA-related protein kinase; Provisional	99.91
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.91
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.91
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.91
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.91
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.91
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.91
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.91
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.91
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.91
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.91
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.91
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.91
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.91
KOG0610	459	consensus Putative serine/threonine protein kinase	99.91
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.91
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.91
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.91
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.91
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.91
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.9
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.9
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.9
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.9
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.9
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.9
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.9
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.9
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.9
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.9
PHA03212	391	serine/threonine kinase US3; Provisional	99.9
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.9
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.9
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.9
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.9
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.9
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.9
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.9
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.9
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.9
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.9
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.9
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.9
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.9
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.9
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.9
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.9
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.9
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.9
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.9
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.9
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.9
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.9
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.9
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.9
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.9
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.9
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.9
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.9
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.9
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.9
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.9
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.9
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.89
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.89
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.89
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.89
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.89
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.89
PTZ00283	496	serine/threonine protein kinase; Provisional	99.89
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.89
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.89
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.89
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.89
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.89
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.89
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.89
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.89
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.89
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.89
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.89
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.89
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.89
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.89
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.89
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.89
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.89
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.89
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.89
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.89
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.89
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.89
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.89
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.89
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.89
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.89
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.89
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.89
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.89
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.89
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.89
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.89
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.88
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.88
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.88
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.88
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.88
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.88
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.88
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.88
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.88
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.88
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.88
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.88
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.88
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.88
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.88
PTZ00036	440	glycogen synthase kinase; Provisional	99.88
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.88
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.88
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.88
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.88
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.88
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.88
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.88
PHA03209	357	serine/threonine kinase US3; Provisional	99.88
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.88
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.88
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.88
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.88
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.88
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.88
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.88
PHA03211	461	serine/threonine kinase US3; Provisional	99.87
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.87
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.87
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.87
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.87
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.87
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.87
KOG0586	596	consensus Serine/threonine protein kinase [General	99.87
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.87
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.87
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.87
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.87
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.87
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.87
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.87
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.87
PHA03207	392	serine/threonine kinase US3; Provisional	99.87
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.87
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.87
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.87
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.87
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.86
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.86
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.86
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.86
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.86
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.86
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.86
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.86
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.86
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.86
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.86
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.86
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.86
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.86
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.86
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.86
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.86
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.86
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.86
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.86
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.86
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.85
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.85
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.85
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.85
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.85
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.85
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.85
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.85
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.85
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.85
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.85
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.85
PLN00009	294	cyclin-dependent kinase A; Provisional	99.85
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.85
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.85
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.84
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.84
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.84
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.84
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.84
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.84
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.84
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.84
KOG0584	632	consensus Serine/threonine protein kinase [General	99.84
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.84
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.84
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.84
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.84
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.84
PTZ00284	467	protein kinase; Provisional	99.84
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.84
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.84
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.83
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.83
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.83
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.83
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.83
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.83
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.83
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.82
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.82
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.82
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.82
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.82
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.82
PHA03210	501	serine/threonine kinase US3; Provisional	99.81
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.81
KOG3653	534	consensus Transforming growth factor beta/activin	99.8
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.79
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.78
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.78
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.78
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.77
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.77
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.77
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.77
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.77
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.77
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.76
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.76
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.75
PHA02882	294	putative serine/threonine kinase; Provisional	99.74
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.73
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.71
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.7
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.7
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.69
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.68
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.68
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.66
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.66
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.64
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.64
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.64
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.62
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.61
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.6
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.55
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.55
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.49
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.44
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.42
KOG1152	772	consensus Signal transduction serine/threonine kin	99.41
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.4
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.33
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.17
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.16
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.0
PRK09188	365	serine/threonine protein kinase; Provisional	98.97
PRK10345	210	hypothetical protein; Provisional	98.92
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.84
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.83
PLN00181	793	protein SPA1-RELATED; Provisional	98.71
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.61
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.6
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.47
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.43
PRK14879	211	serine/threonine protein kinase; Provisional	98.42
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.34
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.33
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.3
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.29
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.29
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.24
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.23
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.07
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.0
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.99
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.9
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.84
smart00090	237	RIO RIO-like kinase.	97.83
PRK12274	218	serine/threonine protein kinase; Provisional	97.75
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.7
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.6
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.5
KOG1243	690	consensus Protein kinase [General function predict	97.37
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.07
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.05
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	96.82
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.78
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.6
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.59
KOG0606	1205	consensus Microtubule-associated serine/threonine	95.94
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.84
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	95.7
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	93.93
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	93.88
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	93.63
PRK10593	297	hypothetical protein; Provisional	92.71
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	91.8
PLN02876	822	acyl-CoA dehydrogenase	91.42
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	91.08
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	90.61
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	87.51
PF01636	239	APH: Phosphotransferase enzyme family This family	86.4
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	83.87
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	83.69
COG4248	637	Uncharacterized protein with protein kinase and he	83.36
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	82.55
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	82.14
KOG0576	829	consensus Mitogen-activated protein kinase kinase	81.79
KOG3087	229	consensus Serine/threonine protein kinase [General	81.36
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	80.53

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-34  Score=235.64  Aligned_cols=219  Identities=39%  Similarity=0.640  Sum_probs=181.0

Q ss_pred             CcccccHHHHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEE
Q 043709           22 CIPFFSLASISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCC   98 (253)
Q Consensus        22 ~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~   98 (253)
                      ..+.|++.++..+|++|+....||+|+||.+++   .++..||||++.........+|.+|+.++.+++|||+|+++|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC  140 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC  140 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence            688899999999999999999999999999654   56689999988765433145599999999999999999999999


Q ss_pred             EecC-eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------
Q 043709           99 VEKG-VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------  137 (253)
Q Consensus        99 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------  137 (253)
                      .+.+ ...||+||+++|+|.+.|+..... .++|..++.|                                        
T Consensus       141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence            9988 599999999999999999765443 7789888877                                        


Q ss_pred             ---------e---------e-----------ecCccccccceeehhHHHHHHHhCCCCcCcCCCC-CcchhhhhhHhhhc
Q 043709          138 ---------Y---------A-----------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN-SLTLLGYVIWNLWN  187 (253)
Q Consensus       138 ---------~---------~-----------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~-~~~~~~~~~~~~~~  187 (253)
                               .         .           ..+..+.|+||||||++|.|+++|+.+.+..... ...++.|. +....
T Consensus       220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~-~~~~~  298 (361)
T KOG1187|consen  220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA-KPLLE  298 (361)
T ss_pred             CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH-HHHHH
Confidence                     1         0           0123557999999999999999999888765533 33355555 67777


Q ss_pred             CCCccccccccCC-CCCCH-HHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          188 DGSLWDLMDPMLQ-TEASY-PILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       188 ~~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      .+...+++|+.+. ..... ....++..++.+|++.+|..||+|.+|++.|+.+...
T Consensus       299 ~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  299 EGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             CcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            7799999999987 44443 6788899999999999999999999999999766543

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.4e-34  Score=248.92  Aligned_cols=199  Identities=29%  Similarity=0.404  Sum_probs=152.9

Q ss_pred             HHHHhcCccccCccccccccceEe---------eCCCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      ...++.+.+..+.||+|+||++++         .....||||.++..... ..++|.+|++++..++|||||+++|+|..
T Consensus       481 ~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~  560 (774)
T KOG1026|consen  481 LEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCRE  560 (774)
T ss_pred             eEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc
Confidence            344567788889999999999554         34678999999977444 78899999999999999999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCC-----------CCccceeee--------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGR-----------LGWGTRVRI--------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~-----------~~~~~~~~i--------------------------------  137 (253)
                      ++.++||+||+..|||.++|+.+.....           +...+.+.|                                
T Consensus       561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l  640 (774)
T KOG1026|consen  561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENL  640 (774)
T ss_pred             CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccce
Confidence            9999999999999999999964222211           111111111                                


Q ss_pred             -----------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhh
Q 043709          138 -----------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYV  181 (253)
Q Consensus       138 -----------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~  181 (253)
                                                         .+..+.|+++||||||||+|||+++ |+.||.....  .+.+.. 
T Consensus       641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--~EVIe~-  717 (774)
T KOG1026|consen  641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--QEVIEC-  717 (774)
T ss_pred             EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--HHHHHH-
Confidence                                               4567889999999999999999987 5677654433  222222 


Q ss_pred             hHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCC
Q 043709          182 IWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPY  245 (253)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~  245 (253)
                                   +....--+.+..++.++.+||..||+.+|.+||++++|-..|+.....-+.
T Consensus       718 -------------i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~  768 (774)
T KOG1026|consen  718 -------------IRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPK  768 (774)
T ss_pred             -------------HHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcc
Confidence                         222222455567778999999999999999999999999999988755443

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=3.2e-33  Score=229.76  Aligned_cols=197  Identities=25%  Similarity=0.342  Sum_probs=148.2

Q ss_pred             HHHHHHHhcCccccCccccccccceEe--eCCC-EEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           28 LASISAATDNFSMENKLGEGGFGPGKL--LNGE-QVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~ig~G~fg~~~~--~~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      ...+....+.+.+++.||+|.||.|.+  +.+. .||+|.++.. .-..+.|.+|+.+|++|+|+|||+++|+|..+..+
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~pi  276 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPI  276 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCce
Confidence            344555666778889999999999544  4554 9999999864 23346789999999999999999999999998899


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      +|||||++.|+|.++|+++... .+.....+.+                                               
T Consensus       277 yIVtE~m~~GsLl~yLr~~~~~-~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d  355 (468)
T KOG0197|consen  277 YIVTEYMPKGSLLDYLRTREGG-LLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGD  355 (468)
T ss_pred             EEEEEecccCcHHHHhhhcCCC-ccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCC
Confidence            9999999999999999752211 1111111111                                               


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         .+..+.|+.||||||||++|||++|.+..+.... ...+              ..+.++..
T Consensus       356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-sn~e--------------v~~~le~G  420 (468)
T KOG0197|consen  356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-SNEE--------------VLELLERG  420 (468)
T ss_pred             CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-CHHH--------------HHHHHhcc
Confidence                               4566779999999999999999998655432221 1222              22334555


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .+...+..++..+.++|..||..+|++|||++.+...|+++..
T Consensus       421 yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~  463 (468)
T KOG0197|consen  421 YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT  463 (468)
T ss_pred             CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence            5556666677788889999999999999999999999988774

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.97  E-value=3.1e-32  Score=223.32  Aligned_cols=194  Identities=27%  Similarity=0.419  Sum_probs=144.5

Q ss_pred             cCccccCccccccccceEe--eCCCE-EEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecC-eeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL--LNGEQ-VAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-VKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--~~~~~-vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-~~~lv~e  109 (253)
                      .++...+.+|+|+||+++.  +.|+. ||||++....  ....+.|.+|+.+|.+++|||||+++|+|.+.. .+.+|||
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE  120 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE  120 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence            3445556799999999554  77888 9999998652  222668999999999999999999999999887 7999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|..+++.. ....+++..++.+                                                    
T Consensus       121 y~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~  199 (362)
T KOG0192|consen  121 YMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKT  199 (362)
T ss_pred             eCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccc
Confidence            99999999999552 1111222211111                                                    


Q ss_pred             ---------------eee--cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 ---------------YAL--HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 ---------------~~~--~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                     ++.  ...|+.|+||||||+++|||+||+.||.....  ......             +.....+
T Consensus       200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~~-------------v~~~~~R  264 (362)
T KOG0192|consen  200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVASA-------------VVVGGLR  264 (362)
T ss_pred             cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHHH-------------HHhcCCC
Confidence                           233  45799999999999999999999999875544  111111             1122233


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCC
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPY  245 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~  245 (253)
                      ...+......+..++.+||..||+.||++.+|+..|+.+......
T Consensus       265 p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  265 PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            333333667888899999999999999999999999988865553

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.6e-30  Score=216.55  Aligned_cols=182  Identities=20%  Similarity=0.234  Sum_probs=134.9

Q ss_pred             cCccccCccccccccce----EeeCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPG----KLLNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~----~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..|..++.||+|||+++    .+.+|+.||+|++.+.   .....+...+|+++.+.|+|||||+++++|.+.+++|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            46999999999999993    3478999999999864   4566788999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCc-------------------------------CCCCcc--ceeee------------------
Q 043709          109 EHMPNKSLDYFLFDPANK-------------------------------GRLGWG--TRVRI------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~-------------------------------~~~~~~--~~~~i------------------  137 (253)
                      |+|.+|+|..+++.++..                               +.+-+.  ..+.|                  
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T  177 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT  177 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccce
Confidence            999999999988532211                               000000  00111                  


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ++....++..+||||+||+||.|++|++||......  +..     .....        ..+  ..+..
T Consensus       178 lCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk--ety-----~~Ik~--------~~Y--~~P~~  240 (592)
T KOG0575|consen  178 LCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK--ETY-----NKIKL--------NEY--SMPSH  240 (592)
T ss_pred             ecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH--HHH-----HHHHh--------cCc--ccccc
Confidence                       334455778999999999999999999999743221  111     11100        111  11124


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+..+.+||.++|+.||.+|||+++|+.
T Consensus       241 ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  241 LSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             cCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            4567788888999999999999999994

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-29  Score=199.33  Aligned_cols=185  Identities=20%  Similarity=0.214  Sum_probs=136.0

Q ss_pred             CccccCccccccccceE----eeCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC-eeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGK----LLNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-VKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~----~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-~~~lv~e~  110 (253)
                      +++.+..||+|..|+|+    .++++.+|+|++... ++...+++.+|+.+++.+.||+||.+||+|.+.+ .+.|+|||
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            56667899999999944    478999999999755 4566678999999999999999999999999998 59999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      |++|+|+.++....   .++....-.+                                                     
T Consensus       160 MDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t  236 (364)
T KOG0581|consen  160 MDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT  236 (364)
T ss_pred             cCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence            99999999984311   1111110000                                                     


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 .+.+..|+.++||||||++++|+++|+.|+.........+....  .....+..+     .++..   .
T Consensus       237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll--~~Iv~~ppP-----~lP~~---~  306 (364)
T KOG0581|consen  237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELL--CAIVDEPPP-----RLPEG---E  306 (364)
T ss_pred             ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHH--HHHhcCCCC-----CCCcc---c
Confidence                       34566799999999999999999999999876533222222221  111111111     11111   3


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ++.++..++..||+.||.+|||+.|+++
T Consensus       307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  307 FSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            5567888888899999999999999984

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=8.4e-30  Score=226.67  Aligned_cols=195  Identities=29%  Similarity=0.392  Sum_probs=143.7

Q ss_pred             hcCccccCccccccccceEee-----C----CCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-----N----GEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-----~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      ..+.++.+.||+|+||.+|..     .    ...||||.+... +.+...+|++|..+|++++|||||+++|+|.+....
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            456778889999999996541     2    335999999876 567778999999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCC----CCccceeee-------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGR----LGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~----~~~~~~~~i-------------------------------------------  137 (253)
                      +|++||+.+|||..+|++.+....    +.....+.+                                           
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence            999999999999999976532211    111111111                                           


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                              .+..+.|+.|+|||||||+|||++|.+.+..+...+ .++...+    ...+   +
T Consensus       851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-~~v~~~~----~~gg---R  922 (1025)
T KOG1095|consen  851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-FEVLLDV----LEGG---R  922 (1025)
T ss_pred             hhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch-HHHHHHH----HhCC---c
Confidence                                    344577999999999999999999977654433322 2222211    1111   3


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      +       +.+..++..+.++|..||+.+|++||++.+|++.+..+..+..
T Consensus       923 L-------~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~  966 (1025)
T KOG1095|consen  923 L-------DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL  966 (1025)
T ss_pred             c-------CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence            3       3334455677788888999999999999999998888875443

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1e-29  Score=202.87  Aligned_cols=189  Identities=19%  Similarity=0.227  Sum_probs=131.9

Q ss_pred             hcCccccCccccccccce----EeeCCCEEEEEEecccc-----c--ccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           35 TDNFSMENKLGEGGFGPG----KLLNGEQVAVKRLSSQS-----G--QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~----~~~~~~~vavK~~~~~~-----~--~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      .+.|.+.+.||+|+||.+    ...+++.||||++++..     +  .......+|+++|++|+|||||++++++...+.
T Consensus       171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS  250 (475)
T ss_pred             cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence            346888999999999993    34789999999997541     1  122335799999999999999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCc-------------------------------CC--CC---ccceeee----------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANK-------------------------------GR--LG---WGTRVRI----------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~-------------------------------~~--~~---~~~~~~i----------  137 (253)
                      .||||||+.||+|.+.+-.....                               ..  +.   ....+.+          
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g  330 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG  330 (475)
T ss_pred             eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence            99999999999998877211100                               00  00   0001111          


Q ss_pred             ------------------eeecC---ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ------------------YALHG---VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ------------------~~~~~---~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                        ++..+   .++.++|+||+||++|-+++|.+||....... .+.+.+             ..
T Consensus       331 ~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-sl~eQI-------------~~  396 (475)
T KOG0615|consen  331 EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-SLKEQI-------------LK  396 (475)
T ss_pred             cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-cHHHHH-------------hc
Confidence                              11111   24458899999999999999999986433221 121111             11


Q ss_pred             ccC--CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHh
Q 043709          197 PML--QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLS  237 (253)
Q Consensus       197 ~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~  237 (253)
                      ..+  -+.....+..+..+|+.++|..||++|||++++++  +++
T Consensus       397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence            111  12233456788999999999999999999999984  455

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.96  E-value=1.4e-29  Score=209.57  Aligned_cols=204  Identities=21%  Similarity=0.286  Sum_probs=146.6

Q ss_pred             CceeecccCCCCCCcccccHHHHHHHhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhc
Q 043709            9 GITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL   86 (253)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l   86 (253)
                      |.+.+-..+......+.+.|++|       +.++-||.|+-|.|++  ..++.||||+++.       .-..++..|++|
T Consensus       104 Gk~~s~e~k~qq~e~WeiPFe~I-------sELeWlGSGaQGAVF~Grl~netVAVKKV~e-------lkETdIKHLRkL  169 (904)
T KOG4721|consen  104 GKAYSTEHKQQQEELWEIPFEEI-------SELEWLGSGAQGAVFLGRLHNETVAVKKVRE-------LKETDIKHLRKL  169 (904)
T ss_pred             ccceeeehhhhhhhhccCCHHHh-------hhhhhhccCcccceeeeeccCceehhHHHhh-------hhhhhHHHHHhc
Confidence            44444444555555555555555       4458999999999666  5689999999874       234678999999


Q ss_pred             cCCCcceEeEEEEecCeeEEEEeeCCCCChhhhccCCCCcC---------------------------------CCCccc
Q 043709           87 QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKG---------------------------------RLGWGT  133 (253)
Q Consensus        87 ~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~---------------------------------~~~~~~  133 (253)
                      +||||+++.|+|....-++||||||..|-|..+|+.....-                                 .+....
T Consensus       170 kH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d  249 (904)
T KOG4721|consen  170 KHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD  249 (904)
T ss_pred             cCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc
Confidence            99999999999999999999999999999999984432110                                 011111


Q ss_pred             eeee----------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh
Q 043709          134 RVRI----------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL  185 (253)
Q Consensus       134 ~~~i----------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~  185 (253)
                      .+.|                            ++...+.++|+|||||||+||||+||..||......  .++       
T Consensus       250 ~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss--AII-------  320 (904)
T KOG4721|consen  250 VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS--AII-------  320 (904)
T ss_pred             eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh--eeE-------
Confidence            1111                            567788999999999999999999999998633221  111       


Q ss_pred             hcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          186 WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                            .-+-.+.+.-..+..++.-+.-|+..||+..|..|||+.+|+..|.=...
T Consensus       321 ------wGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p  370 (904)
T KOG4721|consen  321 ------WGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP  370 (904)
T ss_pred             ------EeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence                  12223334444444555667778888999999999999999988865443

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2.2e-31  Score=203.10  Aligned_cols=189  Identities=20%  Similarity=0.274  Sum_probs=134.3

Q ss_pred             cCccccCccccccccceE----eeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeE-EEEecCe-eEEE
Q 043709           36 DNFSMENKLGEGGFGPGK----LLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIG-CCVEKGV-KILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~----~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~-~~~~~~~-~~lv  107 (253)
                      .+|++.+.||+|+||+++    +.+|..+|.|.++-.  +....+....|+.+|++|+|||||++++ .+..++. ++|+
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            457777999999999944    478999999999854  5566788999999999999999999998 4444555 8999


Q ss_pred             EeeCCCCChhhhccCCCCcC-CCCccceeee-------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKG-RLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||.+|||.+.+++-++.. .++.....++                                                 
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            99999999999984321111 1111111000                                                 


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          .+....|+.++||||+||++|||+...+||.+..-     ...  ..+...++..++++ 
T Consensus       179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~-----~~L--~~KI~qgd~~~~p~-  250 (375)
T KOG0591|consen  179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL-----LSL--CKKIEQGDYPPLPD-  250 (375)
T ss_pred             cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH-----HHH--HHHHHcCCCCCCcH-
Confidence                                34556799999999999999999999999975521     111  11222222222222 


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                             ...+..+..++..|+..||+.||+...++..+...
T Consensus       251 -------~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~  285 (375)
T KOG0591|consen  251 -------EHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE  285 (375)
T ss_pred             -------HHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence                   34456677777789999999999966665555543

>PHA02988 hypothetical protein; Provisional

Probab=99.96  E-value=8.3e-29  Score=199.86  Aligned_cols=198  Identities=18%  Similarity=0.212  Sum_probs=138.0

Q ss_pred             CCCcccccHHHHHHHhcCccccCccccccccceE--eeCCCEEEEEEeccccccc---HHHHHHHHHHHHhccCCCcceE
Q 043709           20 ESCIPFFSLASISAATDNFSMENKLGEGGFGPGK--LLNGEQVAVKRLSSQSGQG---LEEFKNEMMLIAKLQDINLVRI   94 (253)
Q Consensus        20 ~~~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~--~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~~   94 (253)
                      ...++.++.+++.     ......||+|++|.++  ..+++.||||.++......   .+.+.+|+.+|++++||||+++
T Consensus         9 ~~~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~   83 (283)
T PHA02988          9 INDIKCIESDDID-----KYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKI   83 (283)
T ss_pred             cCcceecCHHHcC-----CCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3455566666662     2333679999999844  4689999999997643222   5678899999999999999999


Q ss_pred             eEEEEe----cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------
Q 043709           95 IGCCVE----KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------  137 (253)
Q Consensus        95 ~~~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------  137 (253)
                      +|++.+    ...++++|||+++|+|.+++.+..   .+.+.....+                                 
T Consensus        84 ~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~  160 (283)
T PHA02988         84 YGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY  160 (283)
T ss_pred             eeeEEecccCCCceEEEEEeCCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC
Confidence            999876    356899999999999999984321   1111111100                                 


Q ss_pred             ------------------------------eee--cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh
Q 043709          138 ------------------------------YAL--HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL  185 (253)
Q Consensus       138 ------------------------------~~~--~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~  185 (253)
                                                    ...  ...++.++|||||||++|||++|..||.....  ..+...+    
T Consensus       161 ~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~~~~~i----  234 (283)
T PHA02988        161 KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KEIYDLI----  234 (283)
T ss_pred             cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----
Confidence                                          111  14678899999999999999999999874432  1111111    


Q ss_pred             hcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          186 WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      .....         +...+...+..+.+++.+||+.||++|||++++++.|+.+.
T Consensus       235 ~~~~~---------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        235 INKNN---------SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             HhcCC---------CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            11110         01111234567888999999999999999999999998764

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.96  E-value=2.9e-29  Score=200.20  Aligned_cols=136  Identities=19%  Similarity=0.357  Sum_probs=110.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..+|...+.||+|+||.|++    .++..||||.+.+.  .+...+.+..|+.+|+.++|||||++++++..++.+|+||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            36799999999999999554    67899999999876  5666788999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCc-------------------------------CC--CCcc------ceeee------------
Q 043709          109 EHMPNKSLDYFLFDPANK-------------------------------GR--LGWG------TRVRI------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~-------------------------------~~--~~~~------~~~~i------------  137 (253)
                      |||.||||.+|+++....                               ..  ++..      ..++|            
T Consensus        89 EyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~  168 (429)
T KOG0595|consen   89 EYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG  168 (429)
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence            999999999999543211                               00  0110      11222            


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFY  170 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~  170 (253)
                                      +...+.|+.|+|+||+|+++|++++|+.||...
T Consensus       169 ~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~  217 (429)
T KOG0595|consen  169 SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE  217 (429)
T ss_pred             hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence                            344678999999999999999999999998743

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.95  E-value=2.1e-29  Score=208.93  Aligned_cols=196  Identities=24%  Similarity=0.379  Sum_probs=142.0

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +.+.+.++++||+|.||.+++   ..+..||||+++... ......|.+|+++|.+|+||||++++|+|..++.+++++|
T Consensus       536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E  615 (807)
T KOG1094|consen  536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE  615 (807)
T ss_pred             chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence            556788899999999999665   345899999999764 4445789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|.+++....... ..-...+++                                                    
T Consensus       616 YmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~  694 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR  694 (807)
T ss_pred             HHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence            999999999995432111 000000111                                                    


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHh--CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLS--SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                     .+..+.++.++|+|+||+++||+++  ...||...  ...+.++.. ......+      ....-
T Consensus       695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~l--t~e~vven~-~~~~~~~------~~~~~  765 (807)
T KOG1094|consen  695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQL--TDEQVVENA-GEFFRDQ------GRQVV  765 (807)
T ss_pred             eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhh--hHHHHHHhh-hhhcCCC------Cccee
Confidence                           3455779999999999999999865  56676432  222222222 1111111      11111


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ...+..++..+.++|++||+.+.++||+++++...|++.
T Consensus       766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            223344567888999999999999999999999888764

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.4e-28  Score=198.25  Aligned_cols=197  Identities=16%  Similarity=0.242  Sum_probs=146.2

Q ss_pred             HHHHhcCccccCccccccccce----EeeCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           31 ISAATDNFSMENKLGEGGFGPG----KLLNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~----~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      +....++|++.+.||.|..+.+    +..+++.||||++..+. ....+.+.+|+.+|+.++||||++++..|..+..+|
T Consensus        21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW  100 (516)
T KOG0582|consen   21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW  100 (516)
T ss_pred             CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeE
Confidence            4455678999999999988774    45789999999998653 344688999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCC------------------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPAN------------------------------------------------------------  125 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~------------------------------------------------------------  125 (253)
                      +||.|+.+|++.++++...+                                                            
T Consensus       101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence            99999999999998822111                                                            


Q ss_pred             ----------cCCCCccceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          126 ----------KGRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       126 ----------~~~~~~~~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                .+...|.....+......|+.|+||||||++..||++|..||...++...-+.      . -.+..+...
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~------t-Lqn~pp~~~  253 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL------T-LQNDPPTLL  253 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH------H-hcCCCCCcc
Confidence                      11122222222133445699999999999999999999999986655332111      1 112222222


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+........+..++..||..||.+|||++++++
T Consensus       254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            334444444556668888888899999999999999984

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.4e-29  Score=201.30  Aligned_cols=181  Identities=17%  Similarity=0.197  Sum_probs=137.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ...|+..+.||+|+||.+++    .+++.||+|++... ..+..+...+|+.++.+++++||.++||.+..+..+|++||
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe   91 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME   91 (467)
T ss_pred             ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence            34688889999999999776    57889999999876 56677899999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      ||.||++.+.+.....   +.......+                                                    
T Consensus        92 y~~gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr  168 (467)
T KOG0201|consen   92 YCGGGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR  168 (467)
T ss_pred             HhcCcchhhhhccCCC---CccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence            9999999999843221   111111111                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ++....|+.|+||||||++.+||++|.+|+....+-  ..+          ..+.+-..|.+..   
T Consensus       169 ~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPm--rvl----------flIpk~~PP~L~~---  233 (467)
T KOG0201|consen  169 KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPM--RVL----------FLIPKSAPPRLDG---  233 (467)
T ss_pred             ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcc--eEE----------EeccCCCCCcccc---
Confidence                         455668999999999999999999999997644331  000          0111122222222   


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       .....+.+++..||..||+.|||+.++++
T Consensus       234 -~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  234 -DFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             -ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence             44556777888899999999999999884

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.95  E-value=7.9e-30  Score=217.35  Aligned_cols=189  Identities=22%  Similarity=0.325  Sum_probs=150.5

Q ss_pred             cCccccCccccccccceEe-------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      +...+.+.||.|.||.++.       +....||||.++.. ....+.+|+.|..||.+++||||+++-|+......++||
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi  708 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII  708 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence            3566778999999999554       34568999999876 455667899999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      .||+++|+|+.+|+...  +.+.+.+...+                                                  
T Consensus       709 TEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~  786 (996)
T KOG0196|consen  709 TEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  786 (996)
T ss_pred             hhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence            99999999999996543  23333333322                                                  


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHH-hCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETL-SSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        .+.+..++.++||||||++|||.+ .|.+|++....  +              +....+...
T Consensus       787 ~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--Q--------------dVIkaIe~g  850 (996)
T KOG0196|consen  787 AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--Q--------------DVIKAIEQG  850 (996)
T ss_pred             ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--H--------------HHHHHHHhc
Confidence                              445566999999999999999865 57888764332  2              222334555


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      ++-+.+.+++..+..||+.||+.|=.+||.+++|++.|.++.++
T Consensus       851 yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  851 YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            66667778888999999999999999999999999999988743

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.2e-29  Score=208.15  Aligned_cols=203  Identities=26%  Similarity=0.339  Sum_probs=148.5

Q ss_pred             ccHHHHHHHhcCccccCccccccccceEe-----eCC---CEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceE
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGPGKL-----LNG---EQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRI   94 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~~~~-----~~~---~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~   94 (253)
                      .....|+...++..+.+.||+|+||.|++     ..+   ..||||.....   ......+|.+|.++|++++|||||++
T Consensus       147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~  226 (474)
T KOG0194|consen  147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF  226 (474)
T ss_pred             ccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            34455666677888889999999999544     111   23899999852   46777899999999999999999999


Q ss_pred             eEEEEecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------
Q 043709           95 IGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------  137 (253)
Q Consensus        95 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------  137 (253)
                      ||++....++++|||+|.||+|.++|++...  .++...+...                                     
T Consensus       227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKIS  304 (474)
T KOG0194|consen  227 YGVAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKIS  304 (474)
T ss_pred             EEEEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeC
Confidence            9999999999999999999999999954332  1111111111                                     


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                                  ....+.|+.++|||||||++||+++ |..||.+...  ..+..++       
T Consensus       305 DFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~--~~v~~kI-------  375 (474)
T KOG0194|consen  305 DFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN--YEVKAKI-------  375 (474)
T ss_pred             ccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH--HHHHHHH-------
Confidence                                        3344579999999999999999998 5667653332  1111111       


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCC
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPY  245 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~  245 (253)
                            ....++...+...+..+..++.+||..+|++||+|.++.+.|+.+......
T Consensus       376 ------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  376 ------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             ------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence                  122233333345566777788889999999999999999999988855443

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.95  E-value=9.2e-29  Score=204.52  Aligned_cols=91  Identities=24%  Similarity=0.426  Sum_probs=74.4

Q ss_pred             HHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEe
Q 043709           32 SAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVE  100 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~  100 (253)
                      ..+.++|++.+.||+|+||.+++.         +++.||+|++... .....+.+.+|+.++..+ +||||+++++++..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (338)
T cd05102           3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK   82 (338)
T ss_pred             ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence            345678999999999999996542         3467999999754 234456799999999999 89999999998876


Q ss_pred             c-CeeEEEEeeCCCCChhhhccC
Q 043709          101 K-GVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus       101 ~-~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      . +.++++|||+++|+|.++++.
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~l~~  105 (338)
T cd05102          83 PNGPLMVIVEFCKYGNLSNFLRA  105 (338)
T ss_pred             CCCceEEEEecCCCCcHHHHHHh
Confidence            4 468999999999999988854

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.95  E-value=2.6e-28  Score=203.91  Aligned_cols=193  Identities=22%  Similarity=0.300  Sum_probs=146.2

Q ss_pred             HHHHHhcCccccCccccccccceEe------eCC--CEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL------LNG--EQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~------~~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      ++...++...+.+.||.|.||.++.      ..|  -.||||..+.+ .++..+.|+.|..+|++++||||++++|+|..
T Consensus       383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e  462 (974)
T KOG4257|consen  383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE  462 (974)
T ss_pred             cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec
Confidence            4445556677778899999999543      122  35899999875 67778999999999999999999999999987


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                       ..+|||||+++.|.|+.||+..+..  ++.......                                           
T Consensus       463 -~P~WivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR  539 (974)
T KOG4257|consen  463 -QPMWIVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSR  539 (974)
T ss_pred             -cceeEEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhh
Confidence             5789999999999999999543211  111110000                                           


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                             .+.-..|+.++|||-|||+|||++. |..||.+....+                ..-
T Consensus       540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------VI~  603 (974)
T KOG4257|consen  540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------VIG  603 (974)
T ss_pred             hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------eEE
Confidence                                   2344568999999999999999975 678876544322                222


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .+...-+.+.+..++..+..|+.+||+.+|.+||.+.+|...|+++..
T Consensus       604 ~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  604 HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            334444556667788899999999999999999999999999988874

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.95  E-value=1.4e-28  Score=206.03  Aligned_cols=93  Identities=27%  Similarity=0.349  Sum_probs=77.5

Q ss_pred             HHHHHhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      ++....++|++.+.||+|+||.++.         .++..||||+++.. .....+.+.+|+.++..+ +||||+++++++
T Consensus        29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~  108 (375)
T cd05104          29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC  108 (375)
T ss_pred             ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence            3445566899999999999999654         23568999999754 334456789999999999 899999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccC
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      ...+..++|||||++|+|.++++.
T Consensus       109 ~~~~~~~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104         109 TVGGPTLVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             ccCCcceeeehhccCCcHHHHHHh
Confidence            999999999999999999988854

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.95  E-value=5.3e-28  Score=201.32  Aligned_cols=206  Identities=23%  Similarity=0.350  Sum_probs=153.2

Q ss_pred             ccHHHHHHHhcCccccCccccccccceEe--eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      .+.++|.+..+.+.+.+.||+|.||+|+.  +.| .||||.++.+  .++..+.|.+|+.++++.+|-||+-+.|+|...
T Consensus       382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             ccccccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            45578999999999999999999999776  444 8999999876  456778999999999999999999999999988


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCC--------------------------------cCCCCcc--ceeee----------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPAN--------------------------------KGRLGWG--TRVRI----------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~--------------------------------~~~~~~~--~~~~i----------  137 (253)
                      +. .||..+|+|-+|..+|+..+-                                .+.+.+.  ..+.|          
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~  539 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKT  539 (678)
T ss_pred             ce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeee
Confidence            77 999999999999999843220                                0000000  01111          


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                              .....+|+..+||||||+++|||++|..||.....  ++++..+       +...-
T Consensus       540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~--dqIifmV-------GrG~l  610 (678)
T KOG0193|consen  540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR--DQIIFMV-------GRGYL  610 (678)
T ss_pred             eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh--hheEEEe-------ccccc
Confidence                                    22345799999999999999999999999872222  2222111       21111


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCC
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPY  245 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~  245 (253)
                      ..+..   .....+.+++.+|+..||..++++||.+.+|+..|.+++..+|.
T Consensus       611 ~pd~s---~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pk  659 (678)
T KOG0193|consen  611 MPDLS---KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPK  659 (678)
T ss_pred             Cccch---hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccc
Confidence            11111   11234567888899999999999999999999999999977753

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.95  E-value=8.8e-29  Score=185.64  Aligned_cols=195  Identities=20%  Similarity=0.236  Sum_probs=148.0

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----C
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----G  102 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~  102 (253)
                      .+..++|.+.+.+|+|||+.+++    .++..||+|++...+.+..+..++|+...++++||||+++++.+..+     .
T Consensus        17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            34567899999999999998555    57899999999887778888999999999999999999998877533     3


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcC-CCCccceeee--------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKG-RLGWGTRVRI--------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~i--------------------------------------------  137 (253)
                      ..|+++.|...|+|.+.+......+ .++....+.+                                            
T Consensus        97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence            5999999999999999885433222 1222221111                                            


Q ss_pred             -----------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh
Q 043709          138 -----------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI  182 (253)
Q Consensus       138 -----------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~  182 (253)
                                                         +-.+...++++|||||||++|+|+.|..||.....          
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~----------  246 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ----------  246 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh----------
Confidence                                               22344578899999999999999999999973322          


Q ss_pred             HhhhcCCCcc-ccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          183 WNLWNDGSLW-DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       183 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                          ..+++. .+....+..+.....+..+..++.+|++.||.+||++.+++..+++..
T Consensus       247 ----~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  247 ----QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             ----cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence                233332 222334444444457788999999999999999999999999988764

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.95  E-value=1.1e-27  Score=195.16  Aligned_cols=195  Identities=25%  Similarity=0.420  Sum_probs=131.1

Q ss_pred             hcCccccCccccccccceEee--------------------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcce
Q 043709           35 TDNFSMENKLGEGGFGPGKLL--------------------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVR   93 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~--------------------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~   93 (253)
                      .++|.+.+.||+|+||.+++.                    ++..||+|.+... .......+.+|+.++..++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            467999999999999996642                    2346999999764 3344567999999999999999999


Q ss_pred             EeEEEEecCeeEEEEeeCCCCChhhhccCCCCcC----------------CCCccceeee--------------------
Q 043709           94 IIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKG----------------RLGWGTRVRI--------------------  137 (253)
Q Consensus        94 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~----------------~~~~~~~~~i--------------------  137 (253)
                      +++++...+..+++|||+.+|+|.+++.......                .+.+.....+                    
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d  163 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD  163 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999999999999999998874321100                0011100000                    


Q ss_pred             -----------------------------------------------eeecCccccccceeehhHHHHHHHhCC--CCcC
Q 043709          138 -----------------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSK--KNAH  168 (253)
Q Consensus       138 -----------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~--~p~~  168 (253)
                                                                     ....+.++.++|||||||++|||+++.  .||.
T Consensus       164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~  243 (304)
T cd05096         164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG  243 (304)
T ss_pred             cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence                                                           012245678899999999999999754  4544


Q ss_pred             cCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          169 FYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ..  ......... ........ ...     ....+..++..+.+++.+||+.+|++|||+.+|.+.|++
T Consensus       244 ~~--~~~~~~~~~-~~~~~~~~-~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         244 EL--TDEQVIENA-GEFFRDQG-RQV-----YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             cC--CHHHHHHHH-HHHhhhcc-ccc-----cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            32  222222221 11110000 000     001112334678889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.95  E-value=4.5e-28  Score=193.87  Aligned_cols=187  Identities=26%  Similarity=0.359  Sum_probs=134.2

Q ss_pred             hcCccccCccccccccceEe-------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|++.+.||+|+||.+++       ..+..||+|.++.. +......+.+|+.++++++||||++++|++...+..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            35789999999999999654       23568999999865 33344678999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+++|+|.+++....  ..+.+.....+                                                 
T Consensus        84 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          84 VTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence            999999999999885321  11222211111                                                 


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                       ......++.++|||||||++||+++ |..||.....  ..+....     ..+.         
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--~~~~~~~-----~~~~---------  225 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--QDVIKAV-----EDGF---------  225 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHH-----HCCC---------
Confidence                             1123446778999999999999775 8888764322  1111111     1110         


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ....+...+..+.+++.+||+.+|++||++.+|++.|+..
T Consensus       226 ~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         226 RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            0111223455788899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=3.6e-28  Score=199.20  Aligned_cols=183  Identities=19%  Similarity=0.232  Sum_probs=136.5

Q ss_pred             cCccccCccccccccc----eEeeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe-eEEEE
Q 043709           36 DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV-KILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~-~~lv~  108 (253)
                      ++|..++.+|+|+||.    .+...+..+++|.+...  +....+...+|+.+++++.|||||.+.+.|..++. ++|||
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            5789999999999999    34456779999999865  34445578999999999999999999999998888 99999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      +||+||+|.+.+.+.+. ........+.+                                                   
T Consensus        84 ~Y~eGg~l~~~i~~~k~-~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~  162 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKG-VLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL  162 (426)
T ss_pred             eecCCCCHHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence            99999999999854331 11111111111                                                   


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    .+...+|+.|+|||||||++|||++.+++|...+....  +..+              ....-...
T Consensus       163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L--i~ki--------------~~~~~~Pl  226 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL--ILKI--------------NRGLYSPL  226 (426)
T ss_pred             hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH--HHHH--------------hhccCCCC
Confidence                          34556799999999999999999999999875544221  1111              01111222


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      +......+..++..|++.+|+.||++.+++..
T Consensus       227 p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  227 PSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            33445678888888999999999999999864

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.94  E-value=4.7e-28  Score=209.45  Aligned_cols=190  Identities=18%  Similarity=0.221  Sum_probs=152.0

Q ss_pred             HHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEE----e-
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCV----E-  100 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~----~-  100 (253)
                      +.+...++++.+.|.+|||+.|++    ..+..||+|++-..+....+...+|+++|+.|+ |+|||.|++...    . 
T Consensus        32 ~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~  111 (738)
T KOG1989|consen   32 FTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSN  111 (738)
T ss_pred             EEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCC
Confidence            334555788889999999999777    234899999998777788889999999999997 999999999432    1 


Q ss_pred             --cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------
Q 043709          101 --KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------  137 (253)
Q Consensus       101 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------  137 (253)
                        .-.++|.||||.+|.|-+++..+.... +....++.|                                         
T Consensus       112 ~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF  190 (738)
T KOG1989|consen  112 NGVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF  190 (738)
T ss_pred             CceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence              135889999999999999985433222 333434433                                         


Q ss_pred             --------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhh
Q 043709          138 --------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG  179 (253)
Q Consensus       138 --------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~  179 (253)
                                                            ...+...++|+|||+|||+||-|+....||..          
T Consensus       191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~----------  260 (738)
T KOG1989|consen  191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEE----------  260 (738)
T ss_pred             cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCc----------
Confidence                                                  34556788999999999999999999999872          


Q ss_pred             hhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          180 YVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                               .....++...+...........+.+||..||+.||++||++-+|+..+.++.
T Consensus       261 ---------sg~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~  312 (738)
T KOG1989|consen  261 ---------SGKLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA  312 (738)
T ss_pred             ---------CcceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence                     2244566666666666788889999999999999999999999999988887

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=9.3e-29  Score=197.12  Aligned_cols=181  Identities=31%  Similarity=0.461  Sum_probs=122.7

Q ss_pred             cccCccccccccceEe--------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           39 SMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        39 ~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++.+.||.|+||.++.        ..+..|+||.++.. ..+..+.+.+|+..+++++||||++++|++...+..++|+|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            3567899999999444        23678999999654 34457889999999999999999999999998888999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      ||++|+|.+++.... ...+++.....+                                                    
T Consensus        82 ~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             --TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred             ccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999996531 112222222222                                                    


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                     ......++.++||||||+++||+++ +..|+...  ....+....     ..+.         +.
T Consensus       161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~~~~~~-----~~~~---------~~  224 (259)
T PF07714_consen  161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEEIIEKL-----KQGQ---------RL  224 (259)
T ss_dssp             ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHHHHHHH-----HTTE---------ET
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccc-----cccc---------cc
Confidence                           1123347889999999999999999 56775433  222221111     1111         11


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSML  236 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L  236 (253)
                      ......+..+.+++.+||..+|++|||+.+|++.|
T Consensus       225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  225 PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            11222345677888889999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.94  E-value=1.5e-26  Score=215.17  Aligned_cols=200  Identities=23%  Similarity=0.293  Sum_probs=143.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ...+...+.||+|+||.+++    .++..||||.+......    ...|+.++++++|||||+++|++.+.+..++||||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence            34577778999999999654    46889999998753221    23468889999999999999999999999999999


Q ss_pred             CCCCChhhhccCCC----------------------CcCC-------------------------------------CCc
Q 043709          111 MPNKSLDYFLFDPA----------------------NKGR-------------------------------------LGW  131 (253)
Q Consensus       111 ~~~g~L~~~l~~~~----------------------~~~~-------------------------------------~~~  131 (253)
                      +++|+|.++++.-.                      ....                                     ..|
T Consensus       765 ~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y  844 (968)
T PLN00113        765 IEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAY  844 (968)
T ss_pred             CCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccc
Confidence            99999998873200                      0000                                     000


Q ss_pred             cceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC--CCCHHHHH
Q 043709          132 GTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT--EASYPILK  209 (253)
Q Consensus       132 ~~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  209 (253)
                      ..+.  ......++.++|||||||++|||++|+.||+........+..+. .............++....  ........
T Consensus       845 ~aPE--~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  921 (968)
T PLN00113        845 VAPE--TRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA-RYCYSDCHLDMWIDPSIRGDVSVNQNEIV  921 (968)
T ss_pred             cCcc--cccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH-HHhcCccchhheeCccccCCCCccHHHHH
Confidence            0000  22335688899999999999999999999865444344444444 2222333334444554432  23345667


Q ss_pred             HHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          210 RYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       210 ~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .+.+++.+||+.+|++||++.++++.|+++.+
T Consensus       922 ~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        922 EVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             HHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            78899999999999999999999999999875

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.6e-27  Score=197.24  Aligned_cols=184  Identities=16%  Similarity=0.228  Sum_probs=138.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +...|...+.||+|+-|.++.    .+++.||||++........+-+++|+.+|+..+|+|||++++.+.-++.+|+|||
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence            445788889999999999554    5788999999987766666789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCC---------------------------------------------------------------Cc
Q 043709          110 HMPNKSLDYFLFDPA---------------------------------------------------------------NK  126 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~---------------------------------------------------------------~~  126 (253)
                      |++||+|.+++....                                                               ..
T Consensus       351 ym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmV  430 (550)
T KOG0578|consen  351 YMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMV  430 (550)
T ss_pred             ecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccccc
Confidence            999999999883211                                                               00


Q ss_pred             CCCCccceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc-cCCCCCCH
Q 043709          127 GRLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP-MLQTEASY  205 (253)
Q Consensus       127 ~~~~~~~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  205 (253)
                      ++..|....  +.....|++++||||||++.+||+-|.+||....+...               +..+... ...-....
T Consensus       431 GTPYWMAPE--Vvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA---------------lyLIa~ng~P~lk~~~  493 (550)
T KOG0578|consen  431 GTPYWMAPE--VVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---------------LYLIATNGTPKLKNPE  493 (550)
T ss_pred             CCCCccchh--hhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH---------------HHHHhhcCCCCcCCcc
Confidence            111111111  45566799999999999999999999999875332111               0111111 12222334


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+++.+||..|+++|||+.++|+
T Consensus       494 klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  494 KLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             ccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            45667888888899999999999999985

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.94  E-value=7.8e-28  Score=201.36  Aligned_cols=93  Identities=29%  Similarity=0.388  Sum_probs=76.9

Q ss_pred             HHHHHhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      .|....++|++.+.||+|+||.++.         .++..||+|++... .....+.+.+|+.+++.+ +||||+++++++
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~  111 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC  111 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence            3445556899999999999999653         22357999999754 334456789999999999 899999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccC
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      ...+.++++||||++|+|.++++.
T Consensus       112 ~~~~~~~lv~ey~~~g~L~~~l~~  135 (374)
T cd05106         112 THGGPVLVITEYCCYGDLLNFLRK  135 (374)
T ss_pred             cCCCCeEEeHhhccCCcHHHHHHh
Confidence            999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=6.6e-28  Score=201.71  Aligned_cols=196  Identities=23%  Similarity=0.322  Sum_probs=150.7

Q ss_pred             HHHHHHhcCccccCccccccccceE----eeCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           29 ASISAATDNFSMENKLGEGGFGPGK----LLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        29 ~~l~~~~~~~~~~~~ig~G~fg~~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      ++|.--+.+......||-|.||.++    +...-.||||.++.+ .-.+++|++|..+|+.++|||+|+++|+|......
T Consensus       260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF  338 (1157)
T KOG4278|consen  260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF  338 (1157)
T ss_pred             chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence            5666666678888999999999933    345667999999864 34568999999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee-----------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI-----------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i-----------  137 (253)
                      |||.||+..|+|-+||++..+.. +.-...+                                    .+           
T Consensus       339 YIiTEfM~yGNLLdYLRecnr~e-v~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtg  417 (1157)
T KOG4278|consen  339 YIITEFMCYGNLLDYLRECNRSE-VPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTG  417 (1157)
T ss_pred             EEEEecccCccHHHHHHHhchhh-cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcC
Confidence            99999999999999995422111 0000000                                    00           


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         -+....|+-|+|||+|||+|||+.| |..||.+-+.                .....++..
T Consensus       418 DTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl----------------SqVY~LLEk  481 (1157)
T KOG4278|consen  418 DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL----------------SQVYGLLEK  481 (1157)
T ss_pred             CceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH----------------HHHHHHHhc
Confidence                               1223347789999999999999987 4566653322                122345566


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      .++.+.+..++..+.+||..||+.+|.+||++.+|-+.|+.+..+
T Consensus       482 gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~  526 (1157)
T KOG4278|consen  482 GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS  526 (1157)
T ss_pred             cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence            777888888899999999999999999999999999998887644

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.94  E-value=1.3e-27  Score=201.16  Aligned_cols=93  Identities=24%  Similarity=0.347  Sum_probs=77.4

Q ss_pred             HHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhcc-CCCcceEeEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQ-DINLVRIIGCC   98 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~   98 (253)
                      .+....++|.+++.||+|+||.++..         .+..||||++... .....+.+.+|+.+++.+. ||||+++++++
T Consensus        31 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~  110 (400)
T cd05105          31 RWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGAC  110 (400)
T ss_pred             ceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEE
Confidence            45556778999999999999996542         1346999999754 3344567999999999996 99999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccC
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      ...+.+++|||||++|+|.+++..
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHH
Confidence            999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=7.4e-27  Score=188.44  Aligned_cols=198  Identities=27%  Similarity=0.331  Sum_probs=133.2

Q ss_pred             ccccCccccccccceEe--------eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeEE
Q 043709           38 FSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKIL  106 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~l  106 (253)
                      |+..+.||+|+||.+++        .++..||+|.+.... ......+.+|+.+++.++||||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL   85 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence            38889999999999643        357789999997542 33456788999999999999999999988653  46899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+.+|+|.+++....    +++.....+                                                 
T Consensus        86 v~e~~~~~~l~~~~~~~~----l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  161 (283)
T cd05080          86 IMEYVPLGSLRDYLPKHK----LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH  161 (283)
T ss_pred             EecCCCCCCHHHHHHHcC----CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence            999999999998873211    111100000                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         ......++.++||||||+++|||++|..|+.............. ..........+.....
T Consensus       162 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (283)
T cd05080         162 EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPK-QGQMTVVRLIELLERG  240 (283)
T ss_pred             hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccc-ccccchhhhhhhhhcC
Confidence                               11224567889999999999999999999764432211111100 0000011111111111


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      .....+...+..+.+++.+||+.+|++|||+++|++.|+++.
T Consensus       241 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         241 MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            111222334567888999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.94  E-value=8.8e-28  Score=202.96  Aligned_cols=185  Identities=25%  Similarity=0.277  Sum_probs=136.3

Q ss_pred             HHhcCccccCccccccccceEe--e---C--CCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           33 AATDNFSMENKLGEGGFGPGKL--L---N--GEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~--~---~--~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      +..+...+.++||+|.||.+..  |   .  .-.||||+++.+... ....|++|+.+|.+|+|||++++||+..+ ..+
T Consensus       107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~  185 (1039)
T KOG0199|consen  107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA  185 (1039)
T ss_pred             ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence            3445667779999999998443  2   2  346999999876433 67899999999999999999999999998 678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      .||+|+++.|+|.+.|+. .+...+.....+..                                               
T Consensus       186 mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~  264 (1039)
T KOG0199|consen  186 MMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGE  264 (1039)
T ss_pred             hHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence            999999999999999865 21211111111100                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhC-CCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSS-KKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                           .+.+..|+.++|||+|||++|||+++ ..||.+-..  ..+              .+.+
T Consensus       265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--~qI--------------L~~i  328 (1039)
T KOG0199|consen  265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--IQI--------------LKNI  328 (1039)
T ss_pred             CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--HHH--------------HHhc
Confidence                                 45667799999999999999999986 466653321  111              2222


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      +..-+-..+..+++++.++++.||..+|.+||++..|.+.
T Consensus       329 D~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  329 DAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             cccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            3333344455677899999999999999999999999743

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.94  E-value=2.8e-27  Score=188.62  Aligned_cols=190  Identities=27%  Similarity=0.372  Sum_probs=138.4

Q ss_pred             HHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           33 AATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .+..+|++.+.||+|+||.++.   ..+..+|+|.+........+.+.+|+.+++.++||||+++++++...+..+++||
T Consensus         3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            4567899999999999999554   3478899999987655566789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|.+++.+.... .+.+.....+                                                    
T Consensus        83 ~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~  161 (261)
T cd05148          83 LMEKGSLLAFLRSPEGQ-VLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLS  161 (261)
T ss_pred             ecccCCHHHHHhcCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccc
Confidence            99999999998542211 1121111111                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++||||||+++|++++ |..||.....  .......    .          ...+...
T Consensus       162 ~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~~~~~~~----~----------~~~~~~~  225 (261)
T cd05148         162 SDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--HEVYDQI----T----------AGYRMPC  225 (261)
T ss_pred             cCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHH----H----------hCCcCCC
Confidence                         1112346678999999999999998 7788754321  1111111    0          0111111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      +...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         226 PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            223346788899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.94  E-value=1.1e-27  Score=198.31  Aligned_cols=194  Identities=18%  Similarity=0.218  Sum_probs=144.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|.+.+.||+|+||.+|+    .+.+.||+|.+.+.  ...+...+.+|+++++.++|||||.+++++.+..++|+|.|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            5788899999999999776    56789999999765  34456779999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      ||.| +|..+|....+   ++......+                                                    
T Consensus        82 ~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl  157 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL  157 (808)
T ss_pred             hhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence            9996 99999833221   111111111                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC--
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE--  202 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  202 (253)
                                   ...+..|+..+|+||+||++||+.+|++||.....                   .+++......+  
T Consensus       158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si-------------------~~Lv~~I~~d~v~  218 (808)
T KOG0597|consen  158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI-------------------TQLVKSILKDPVK  218 (808)
T ss_pred             eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH-------------------HHHHHHHhcCCCC
Confidence                         33467799999999999999999999999873321                   11111111111  


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcccCCCCCCCCCCC
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIVNLPYPQQSAFL  252 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~~~~~~~~~~~~  252 (253)
                      ++......+.+++...+..||..|.++.+++.  ..++.......|.+|+|.
T Consensus       219 ~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~~~~~~~~a~~  270 (808)
T KOG0597|consen  219 PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINIAELPAQVAFD  270 (808)
T ss_pred             CcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhhhccccccccc
Confidence            12256678889999999999999999999984  355555555566666553

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.94  E-value=1.4e-26  Score=185.10  Aligned_cols=187  Identities=25%  Similarity=0.377  Sum_probs=132.7

Q ss_pred             hcCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|++.+.||+|+||.+++.       +...||||.+... .......+.+|+.+++.++||||+++++++...+..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i   82 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI   82 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence            357999999999999996541       2457999998754 33445678999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+++|+|.+++.....  .+.+.....+                                                 
T Consensus        83 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          83 ITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence            9999999999998743211  1111111111                                                 


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++||||||+++||+++ |..||.....  .......     ...         
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~-----~~~---------  224 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--QDVIKAV-----EDG---------  224 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--HHHHHHH-----HcC---------
Confidence                              1112345678999999999999998 8888753221  1111111     011         


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      .........+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       225 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         225 YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            00011122345678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=8.2e-27  Score=196.10  Aligned_cols=188  Identities=22%  Similarity=0.248  Sum_probs=137.5

Q ss_pred             cCccccCccccccccc----eEeeCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +-|++++.||+|+-|.    .+..+|+.+|||++.+.   +........+|+-+|+-+.||||+++|+++.+...+|+|.
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            4589999999999998    44578999999999764   3444567899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcC-------------------------------C--CCccceeee------------------
Q 043709          109 EHMPNKSLDYFLFDPANKG-------------------------------R--LGWGTRVRI------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~-------------------------------~--~~~~~~~~i------------------  137 (253)
                      ||+++|.|.+++.+.....                               .  +...-.++|                  
T Consensus        92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTS  171 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETS  171 (786)
T ss_pred             EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCcccccc
Confidence            9999999999983322110                               0  000001111                  


Q ss_pred             ----------eeecCcc-ccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 ----------YALHGVF-SIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 ----------~~~~~~~-~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                ++.+..| +.++||||+|||||.|++|+.||+.+..  ..++..+     ..+.          .+.+..
T Consensus       172 CGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi--r~LLlKV-----~~G~----------f~MPs~  234 (786)
T KOG0588|consen  172 CGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI--RVLLLKV-----QRGV----------FEMPSN  234 (786)
T ss_pred             CCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH--HHHHHHH-----HcCc----------ccCCCc
Confidence                      2334444 6789999999999999999999983322  2222222     1111          122344


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHHH--Hhhcc
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNEI  240 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~~  240 (253)
                      ++.++.+|+.+|+..||++|.|+++|++.  |....
T Consensus       235 Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  235 ISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT  270 (786)
T ss_pred             CCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence            55678888889999999999999999963  44443

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.93  E-value=1.7e-26  Score=186.33  Aligned_cols=187  Identities=25%  Similarity=0.402  Sum_probs=132.7

Q ss_pred             cCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ++|++.+.||+|+||.++..         ....||+|.+... .....+.+.+|+.+++.++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            47888999999999996542         1257999999754 3344567899999999999999999999999989999


Q ss_pred             EEEeeCCCCChhhhccCCCCcC-------------CCCccceeee-----------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKG-------------RLGWGTRVRI-----------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~-------------~~~~~~~~~i-----------------------------------  137 (253)
                      ++|||+++|+|.+++.......             .+.+.....+                                   
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  164 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK  164 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence            9999999999998885421110             0111000000                                   


Q ss_pred             --------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHh
Q 043709          138 --------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 --------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                      ......++.++|||||||++|||++ |..||......  .+...+   
T Consensus       165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~i---  239 (283)
T cd05048         165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEMI---  239 (283)
T ss_pred             ECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH---
Confidence                                            1122456778999999999999998 88887643321  111111   


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                        ..+..         ...+...+..+.+++.+||+.+|.+||++.+|++.|++
T Consensus       240 --~~~~~---------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         240 --RSRQL---------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             --HcCCc---------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence              11111         11123445778899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.93  E-value=2.7e-26  Score=189.23  Aligned_cols=199  Identities=16%  Similarity=0.176  Sum_probs=132.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .++..+|+|.+... .....+.+.+|+.++++++||||+++++++..++..+++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            46899999999999999544    46888999999764 33445679999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcC----------------------CC---Cc---------cceeee------------------
Q 043709          110 HMPNKSLDYFLFDPANKG----------------------RL---GW---------GTRVRI------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~----------------------~~---~~---------~~~~~i------------------  137 (253)
                      |+++|+|.+++.......                      .+   +.         .....+                  
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  163 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  163 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCC
Confidence            999999998874321100                      00   00         000000                  


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC-CCcc-----------c---
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND-GSLW-----------D---  193 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~-----------~---  193 (253)
                               ......++.++|||||||++|||++|+.||.......  +........... ....           .   
T Consensus       164 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (331)
T cd06649         164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVS  241 (331)
T ss_pred             CCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccccCCccccCccccccccccc
Confidence                     1233457889999999999999999999986433211  110000000000 0000           0   


Q ss_pred             ------------------cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          194 ------------------LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       194 ------------------~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                                        +................+.+++.+||+.||++|||+.++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         242 GHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             ccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                              000000000111245678899999999999999999999854

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.93  E-value=7.2e-27  Score=196.58  Aligned_cols=92  Identities=26%  Similarity=0.409  Sum_probs=77.2

Q ss_pred             HHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhcc-CCCcceEeEEEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCV   99 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~   99 (253)
                      +....++|.+.+.||+|+||.+++.         .+..||+|++... .....+.+.+|+.++..+. ||||+++++++.
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~  111 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT  111 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence            5556667889999999999996542         3457999999754 2333457899999999997 999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccC
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      ..+.+++|||||.+|+|.++++.
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHh
Confidence            99999999999999999998854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.93  E-value=8e-26  Score=183.62  Aligned_cols=195  Identities=26%  Similarity=0.427  Sum_probs=131.0

Q ss_pred             hcCccccCccccccccceEee--------------------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcce
Q 043709           35 TDNFSMENKLGEGGFGPGKLL--------------------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVR   93 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~--------------------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~   93 (253)
                      .++|++.+.||+|+||.+++.                    ++..+|+|.+... .....+.+.+|+.+++.++|+||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            457999999999999997652                    2346899999754 3344568999999999999999999


Q ss_pred             EeEEEEecCeeEEEEeeCCCCChhhhccCCCCcCC--------CCccceeee----------------------------
Q 043709           94 IIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGR--------LGWGTRVRI----------------------------  137 (253)
Q Consensus        94 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~--------~~~~~~~~i----------------------------  137 (253)
                      +++++...+..+++|||+++|+|.+++........        +.+.....+                            
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili  163 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence            99999999999999999999999988754221100        000000000                            


Q ss_pred             ---------------------------------------eeecCccccccceeehhHHHHHHHh--CCCCcCcCCCCCcc
Q 043709          138 ---------------------------------------YALHGVFSIKSDVFSFGVLLLETLS--SKKNAHFYNTNSLT  176 (253)
Q Consensus       138 ---------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~--~~~p~~~~~~~~~~  176 (253)
                                                             ....+.++.++|||||||++|||++  +..||.....  ..
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~--~~  241 (296)
T cd05095         164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD--EQ  241 (296)
T ss_pred             cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh--HH
Confidence                                                   0112345678999999999999998  5566643222  11


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ..... ......... ...     ......++..+.+++.+||+.||++||++.+|++.|++
T Consensus       242 ~~~~~-~~~~~~~~~-~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         242 VIENT-GEFFRDQGR-QVY-----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHH-HHHHhhccc-ccc-----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            11111 010000000 000     01111233678889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.93  E-value=3.3e-27  Score=182.06  Aligned_cols=198  Identities=16%  Similarity=0.191  Sum_probs=130.6

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +.|+.+..+|+|+||.+.+    .+|+.||||++...  ++...+-.++|+++|++++|+|+|.++.+|.....+++|+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            3578888999999999544    78999999999754  34445668999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCC-------------CCccc--------------------eeee-------------------
Q 043709          110 HMPNKSLDYFLFDPANKGR-------------LGWGT--------------------RVRI-------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~-------------~~~~~--------------------~~~i-------------------  137 (253)
                      ||+.--|..+-+.......             +.|..                    ...+                   
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDY  161 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDY  161 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhh
Confidence            9987444433211110000             00000                    0000                   


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcc-hhhhhhH-------hhhc------CCCcc
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLT-LLGYVIW-------NLWN------DGSLW  192 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~-~~~~~~~-------~~~~------~~~~~  192 (253)
                                 ......|+..+||||+||++.||++|.+-|++.+..++- .+.....       ....      +-.++
T Consensus       162 VATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP  241 (396)
T KOG0593|consen  162 VATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLP  241 (396)
T ss_pred             hhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecC
Confidence                       233457999999999999999999999877655443211 1111100       0111      11111


Q ss_pred             ccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 043709          193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      +...+..-..........+++++..|+..||++|++.++++
T Consensus       242 ~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  242 EPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             CCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence            11111111111233455788999999999999999999987

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.93  E-value=1.6e-26  Score=186.07  Aligned_cols=188  Identities=27%  Similarity=0.436  Sum_probs=133.2

Q ss_pred             hcCccccCccccccccceEee---------CCCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .++|.+.+.||+|+||.+++.         .+..||+|.+...... ..+.+.+|+.+++.+.||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            356888899999999996542         2468999999765333 457899999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCc-----------CCCCccceeee------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK-----------GRLGWGTRVRI------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~-----------~~~~~~~~~~i------------------------------------  137 (253)
                      +++|||+++|+|.+++......           ..+.+.....+                                    
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl  163 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKI  163 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEE
Confidence            9999999999999888532110           00111000000                                    


Q ss_pred             -------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhh
Q 043709          138 -------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNL  185 (253)
Q Consensus       138 -------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~  185 (253)
                                                     ......++.++|||||||++|||++ |..||.....  .......    
T Consensus       164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~--~~~~~~~----  237 (280)
T cd05049         164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN--EEVIECI----  237 (280)
T ss_pred             CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH----
Confidence                                           1123446788999999999999998 8888754322  1111111    


Q ss_pred             hcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          186 WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                       ..+..         .......+..+.+++.+||+.||++||++.+|++.|++
T Consensus       238 -~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         238 -TQGRL---------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             -HcCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence             11111         11112334678889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.93  E-value=1.7e-26  Score=187.27  Aligned_cols=194  Identities=24%  Similarity=0.387  Sum_probs=135.3

Q ss_pred             HHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCV   99 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~   99 (253)
                      +....++|++.+.||+|+||.+++.         ....+|+|.+... .......+.+|+.+++.+ +||||+++++++.
T Consensus         7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   86 (293)
T cd05053           7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT   86 (293)
T ss_pred             cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence            4455567999999999999995542         2357999998754 334456788999999999 7999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCCC-------------cCCCCccceeee-----------------------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPAN-------------KGRLGWGTRVRI-----------------------------  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i-----------------------------  137 (253)
                      .++.++++|||+++|+|..++.....             ...+.+.....+                             
T Consensus        87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~  166 (293)
T cd05053          87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT  166 (293)
T ss_pred             CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc
Confidence            99999999999999999988853210             000111100000                             


Q ss_pred             --------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchh
Q 043709          138 --------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLL  178 (253)
Q Consensus       138 --------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~  178 (253)
                                                            ......++.++|||||||++||+++ |..||.......  ..
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~  244 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LF  244 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--HH
Confidence                                                  1122346678999999999999997 777775332111  11


Q ss_pred             hhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          179 GYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                           .....+.         ...........+.+++.+||..+|++|||+.++++.|+++.
T Consensus       245 -----~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         245 -----KLLKEGY---------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             -----HHHHcCC---------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence                 1111111         11112233457888999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.93  E-value=2.6e-26  Score=182.63  Aligned_cols=182  Identities=25%  Similarity=0.383  Sum_probs=128.6

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      ++|++.+.||+|+||.+++   ..+..+|+|.+... ....+.+.+|+.+++.++||||+++++++...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            4688889999999999554   44568999988643 2334678999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|.++++....  .+++.....+                                                       
T Consensus        83 ~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05114          83 NGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG  160 (256)
T ss_pred             CCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence            9999998853221  1111111111                                                       


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                 ......++.++||||||+++||+++ |..||.....  ......+    . .+.  ....+.       
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i----~-~~~--~~~~~~-------  224 (256)
T cd05114         161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMI----S-RGF--RLYRPK-------  224 (256)
T ss_pred             CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH----H-CCC--CCCCCC-------
Confidence                       1112345678999999999999999 7778753321  1111111    1 110  011111       


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSML  236 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L  236 (253)
                      .....+.+++.+||+.+|++||+++++++.|
T Consensus       225 ~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         225 LASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            1234678899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.93  E-value=1.9e-26  Score=186.78  Aligned_cols=191  Identities=26%  Similarity=0.413  Sum_probs=136.3

Q ss_pred             hcCccccCccccccccceEee---------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..+|.+.+.||+|+||.++..         ++..+++|.+........+.+.+|+.+++.++||||+++++++...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI   83 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence            356888899999999995542         34568999987655555677999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCC-------------cCCCCccceeee-----------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPAN-------------KGRLGWGTRVRI-----------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~-------------~~~~~~~~~~~i-----------------------------------  137 (253)
                      ++|||+++++|.+++.....             ...+++.....+                                   
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  163 (291)
T cd05094          84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVK  163 (291)
T ss_pred             EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence            99999999999998854211             001111111111                                   


Q ss_pred             --------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHh
Q 043709          138 --------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 --------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                      ......++.++|||||||++|||++ |..||......  ...     .
T Consensus       164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~-----~  236 (291)
T cd05094         164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--EVI-----E  236 (291)
T ss_pred             ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH-----H
Confidence                                            1122345678999999999999998 88887543221  111     1


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ....+....         .....+..+.+++.+||+.+|++||++.+|++.|+++..
T Consensus       237 ~~~~~~~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         237 CITQGRVLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HHhCCCCCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            111111111         111234568889999999999999999999999999974

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=8.8e-26  Score=183.28  Aligned_cols=195  Identities=25%  Similarity=0.395  Sum_probs=130.1

Q ss_pred             hcCccccCccccccccceEeeC------------------CCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEe
Q 043709           35 TDNFSMENKLGEGGFGPGKLLN------------------GEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRII   95 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~~------------------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~   95 (253)
                      .++|++.+.||+|+||.+++..                  ...||+|.++.. .....+.+.+|+++++.++||||++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            4579999999999999966521                  235899999754 344456799999999999999999999


Q ss_pred             EEEEecCeeEEEEeeCCCCChhhhccCCCCcC---------CCCccceeee-----------------------------
Q 043709           96 GCCVEKGVKILIYEHMPNKSLDYFLFDPANKG---------RLGWGTRVRI-----------------------------  137 (253)
Q Consensus        96 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~---------~~~~~~~~~i-----------------------------  137 (253)
                      +++...+..+++|||+++++|.+++.......         ...+.....+                             
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~  163 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG  163 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc
Confidence            99999999999999999999988874321000         0111100000                             


Q ss_pred             --------------------------------------eeecCccccccceeehhHHHHHHHhC--CCCcCcCCCCCcch
Q 043709          138 --------------------------------------YALHGVFSIKSDVFSFGVLLLETLSS--KKNAHFYNTNSLTL  177 (253)
Q Consensus       138 --------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~--~~p~~~~~~~~~~~  177 (253)
                                                            ....+.++.++|||||||++|||+++  ..||...  .....
T Consensus       164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~--~~~~~  241 (295)
T cd05097         164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLL--SDEQV  241 (295)
T ss_pred             CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCccc--ChHHH
Confidence                                                  01123457889999999999999984  4454322  22222


Q ss_pred             hhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          178 LGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ..............  ..     .......+..+.+++.+||+.+|++|||+++|++.|++
T Consensus       242 ~~~~~~~~~~~~~~--~~-----~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~  295 (295)
T cd05097         242 IENTGEFFRNQGRQ--IY-----LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE  295 (295)
T ss_pred             HHHHHHhhhhcccc--cc-----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence            22110100000000  00     01111234578899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.93  E-value=1.1e-25  Score=180.07  Aligned_cols=191  Identities=17%  Similarity=0.234  Sum_probs=134.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.++.    .+++.||||.+...   .......+.+|+.+++.++||||+++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            5799999999999999543    47899999988642   2344457899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCC-cCCCCccceeee--------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPAN-KGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||+++|+|.+++..... ...++......+                                                  
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~  161 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH
Confidence            99999999887732111 011111110000                                                  


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ......++.++|+||||+++|||++|+.||.........+....     ....        ....
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~-----~~~~--------~~~~  228 (267)
T cd08228         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKI-----EQCD--------YPPL  228 (267)
T ss_pred             HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHH-----hcCC--------CCCC
Confidence                           11223456789999999999999999999864433222111111     0111        1111


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ........+.+++.+||..+|++||++.+|++.|+.+
T Consensus       229 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         229 PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            1223446688899999999999999999999999865

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.93  E-value=1.8e-26  Score=184.02  Aligned_cols=188  Identities=27%  Similarity=0.351  Sum_probs=133.0

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..++|++.+.||+|+||.+++   ..+..||+|.+.... ...+.+.+|+.+++.++|+||+++++.+...+..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY   82 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence            456899999999999999554   456789999886532 3457899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++...... ...+.....+                                                     
T Consensus        83 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05072          83 MAKGSLLDFLKSDEGG-KVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR  161 (261)
T ss_pred             CCCCcHHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence            9999999988432111 1111111000                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++|||||||++|+|++ |..||.....  .......    . ..         .....
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~----~-~~---------~~~~~  225 (261)
T cd05072         162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN--SDVMSAL----Q-RG---------YRMPR  225 (261)
T ss_pred             CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH--HHHHHHH----H-cC---------CCCCC
Confidence                         1122345668999999999999998 8888753221  1111111    0 01         00111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ....+..+.+++.+||..+|++||+++++.+.|++.
T Consensus       226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         226 MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            112345678899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.93  E-value=1.5e-26  Score=184.72  Aligned_cols=187  Identities=25%  Similarity=0.308  Sum_probs=133.8

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..+|++.+.||+|+||.+++    ..++.||+|.+... ......+.+|+.+++.++||||+++++++...+.++++|||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   83 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence            35688889999999999543    45889999998753 33456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++..... ..+.+.....+                                                     
T Consensus        84 ~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~  162 (263)
T cd05052          84 MTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  162 (263)
T ss_pred             CCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence            999999998843211 11122111111                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++|||||||++|||++ |..||.....  .....    ... .         ......
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~----~~~-~---------~~~~~~  226 (263)
T cd05052         163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYE----LLE-K---------GYRMER  226 (263)
T ss_pred             CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH----HHH-C---------CCCCCC
Confidence                         1122345678999999999999998 7888753321  11111    110 0         111122


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ....+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       227 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         227 PEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            223446788899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.93  E-value=1.3e-26  Score=186.48  Aligned_cols=190  Identities=25%  Similarity=0.372  Sum_probs=131.8

Q ss_pred             HHhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC
Q 043709           33 AATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG  102 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~  102 (253)
                      +.+++|++.+.||+|+||.++.         ..+..||+|++... .......+.+|+.+++.++||||+++++++...+
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   82 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ   82 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            4567899999999999999653         23467999998643 2234456889999999999999999999999889


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcC-------CCCccceeee--------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKG-------RLGWGTRVRI--------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~~~~~~~i--------------------------------------  137 (253)
                      ..+++|||+++|+|.+++.+.....       ...+.....+                                      
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d  162 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD  162 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence            9999999999999999885422110       0111111100                                      


Q ss_pred             -----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhc
Q 043709          138 -----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWN  187 (253)
Q Consensus       138 -----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~  187 (253)
                                                   ......++.++|||||||++|||++ |..||.....  ......+     .
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~~~~~-----~  235 (277)
T cd05062         163 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRFV-----M  235 (277)
T ss_pred             CCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH-----H
Confidence                                         0112346778999999999999999 5677653321  1111111     1


Q ss_pred             CCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          188 DGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ......         .....+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       236 ~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         236 EGGLLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             cCCcCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            111111         111233567889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=3.6e-26  Score=184.50  Aligned_cols=202  Identities=24%  Similarity=0.347  Sum_probs=132.8

Q ss_pred             cCccccCccccccccceEe--------eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe--cCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~~  105 (253)
                      ++|++.+.||+|+||.++.        .++..||+|.+........+.+.+|+.+++.++||||+++++++..  ...++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4788999999999999654        3578899999986665666789999999999999999999998754  35689


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +++||+++|+|.+++.....  .+.+.....+                                                
T Consensus        84 lv~e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~  161 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRE--RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD  161 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence            99999999999998843211  1111111110                                                


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          ......++.++|||||||++|||+++..++.......................+.+....
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05081         162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN  241 (284)
T ss_pred             CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhc
Confidence                                011234677899999999999999987765432211000000000000000000001111


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ..........+..+.+++.+||..+|++|||+.+|++.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            111112223446788899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.93  E-value=2.7e-26  Score=185.67  Aligned_cols=192  Identities=27%  Similarity=0.398  Sum_probs=136.3

Q ss_pred             hcCccccCccccccccceEee---------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..+|.+.+.||+|+||++++.         ++..+|+|.+........+.+.+|+.+++.++||||+++++++...+.++
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   83 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            457899999999999995542         34568999998665556678999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCc----------CCCCccceeee--------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANK----------GRLGWGTRVRI--------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~----------~~~~~~~~~~i--------------------------------------  137 (253)
                      ++|||+++|+|.+++......          ..+++.....+                                      
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~d  163 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD  163 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEecc
Confidence            999999999999887532110          00111111000                                      


Q ss_pred             -----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhc
Q 043709          138 -----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWN  187 (253)
Q Consensus       138 -----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~  187 (253)
                                                   ......++.++|||||||++|||++ |..||.....  ......+     .
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--~~~~~~i-----~  236 (288)
T cd05093         164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIECI-----T  236 (288)
T ss_pred             CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH-----H
Confidence                                         1122346778999999999999998 7777653322  1111111     1


Q ss_pred             CCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          188 DGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      .+....         .....+..+.+++.+||+.+|.+|||+.++++.|+++...
T Consensus       237 ~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         237 QGRVLQ---------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             cCCcCC---------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            111111         0112335688899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=3e-26  Score=182.76  Aligned_cols=188  Identities=28%  Similarity=0.356  Sum_probs=133.8

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..++|++.+.||+|++|.+++   ..++.||+|.++... ...+.+.+|+.+++.++||||+++++++...+..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   82 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL   82 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence            456799999999999999554   456789999987543 3456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.+++.... ...+.+.....+                                                     
T Consensus        83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05068          83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR  161 (261)
T ss_pred             ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence            99999999885422 011111111111                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++||||||+++|||++ |..||.....  ......+     ...         .....
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~-----~~~---------~~~~~  225 (261)
T cd05068         162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--AEVLQQV-----DQG---------YRMPC  225 (261)
T ss_pred             CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH-----HcC---------CCCCC
Confidence                         1122345678999999999999999 8877753221  1111111     010         00111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ....+..+.+++.+||+.+|.+||++.++++.|++.
T Consensus       226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            123346788899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=8e-26  Score=184.84  Aligned_cols=211  Identities=18%  Similarity=0.167  Sum_probs=143.2

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~  105 (253)
                      ..+.|+.++.||+|+||.|++    .+|+.||+|+++.+.  +.......+||.+|++|.||||+++.+...+.  ..+|
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY  194 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY  194 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence            345689999999999999665    689999999998763  55567789999999999999999999999877  6899


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ||+||+++ ||.-++.+..-.  +...++..+                                                
T Consensus       195 lVFeYMdh-DL~GLl~~p~vk--ft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~  271 (560)
T KOG0600|consen  195 LVFEYMDH-DLSGLLSSPGVK--FTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS  271 (560)
T ss_pred             EEEecccc-hhhhhhcCCCcc--cChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence            99999996 887776332111  111110000                                                


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCcc----
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLW----  192 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~----  192 (253)
                                         .+....|+.++|+||.||||.||+.|++.+.+...  .+.+..++...-  ....+.    
T Consensus       272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE--veQl~kIfklcGSP~e~~W~~~kL  349 (560)
T KOG0600|consen  272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE--VEQLHKIFKLCGSPTEDYWPVSKL  349 (560)
T ss_pred             CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH--HHHHHHHHHHhCCCChhccccccC
Confidence                               34456799999999999999999999988775433  222222212111  111111    


Q ss_pred             ---ccccccCC-----CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCC
Q 043709          193 ---DLMDPMLQ-----TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF  251 (253)
Q Consensus       193 ---~~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~  251 (253)
                         ..+.+...     .+.....+...++|+..+|..||++|.|+.++++  .++....|.|..|+.
T Consensus       350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~--seyF~t~p~~~~p~~  414 (560)
T KOG0600|consen  350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ--SEYFTTEPLPCDPSS  414 (560)
T ss_pred             CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc--CcccccCCCCCCccc
Confidence               11111110     0111234456888999999999999999999774  344455555555543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.93  E-value=8.9e-27  Score=186.09  Aligned_cols=187  Identities=23%  Similarity=0.307  Sum_probs=129.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecC--eeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG--VKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~--~~~lv~  108 (253)
                      ..+|...+.||+|+||.|++    .+++..|||.+...+....+.+.+|+.+|++++|||||+++|......  .++++|
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m   95 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM   95 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence            34688889999999999766    346899999998654333677999999999999999999999855444  699999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccc-------------------------------------eeee--------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGT-------------------------------------RVRI--------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~-------------------------------------~~~i--------------  137 (253)
                      ||+++|+|.+++.+...  .++...                                     .+.+              
T Consensus        96 Ey~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   96 EYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             eccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence            99999999998854221  011100                                     0000              


Q ss_pred             ------------------eeecC-ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHG-VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~-~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ++..+ ....++||||+||++.||+||.+||...    ........+... ....+      
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~-~~~~P------  242 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGR-EDSLP------  242 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhc-cCCCC------
Confidence                              11212 1224899999999999999999998753    111111101111 11111      


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                         ..+...+....+++.+|+..+|+.||||+++++.--
T Consensus       243 ---~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  243 ---EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             ---CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence               222234566777888899999999999999997543

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.93  E-value=2.2e-25  Score=178.12  Aligned_cols=192  Identities=17%  Similarity=0.238  Sum_probs=136.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|.++..   .....+.+.+|+.+++.++|+||+++++.+...+..+++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            5799999999999999543    47889999988632   3334678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCc-CCCCccceeee--------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANK-GRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~-~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||+++|+|..++.+.... ..+.......+                                                  
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~  161 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence            999999999887432111 11111111110                                                  


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ...+..++.++|+||||+++|++++|..||..............     ..+..        ...
T Consensus       162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~--------~~~  228 (267)
T cd08224         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-----EKCDY--------PPL  228 (267)
T ss_pred             ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhh-----hcCCC--------CCC
Confidence                           11223466789999999999999999999864432211111111     01111        011


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ........+.+++.+||..+|++|||+.+|++.|+++.
T Consensus       229 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         229 PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            11234457788999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.93  E-value=4.5e-26  Score=185.59  Aligned_cols=193  Identities=23%  Similarity=0.351  Sum_probs=134.2

Q ss_pred             HHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCV   99 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~   99 (253)
                      +....++|.+.+.||+|+||.+++.         .+..+|+|.++.. .....+.+.+|+.+++.+ +||||+++++++.
T Consensus        30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  109 (302)
T cd05055          30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT  109 (302)
T ss_pred             ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence            3345567999999999999995432         3457999998754 334456799999999999 7999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------  137 (253)
                      ..+..+++|||+++|+|.++++..... .+.+.....+                                          
T Consensus       110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~  188 (302)
T cd05055         110 IGGPILVITEYCCYGDLLNFLRRKRES-FLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA  188 (302)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence            999999999999999999988532211 0111111111                                          


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                               ......++.++||||+||++||+++ |..||....... ...     .....+  
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~-----~~~~~~--  260 (302)
T cd05055         189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFY-----KLIKEG--  260 (302)
T ss_pred             ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHH-----HHHHcC--
Confidence                                     0112335678899999999999998 888875433211 111     111111  


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                             ............+.+++.+||..+|++||++.++++.|++.
T Consensus       261 -------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         261 -------YRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             -------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence                   01111112345788899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.93  E-value=2.6e-26  Score=189.65  Aligned_cols=92  Identities=23%  Similarity=0.411  Sum_probs=74.3

Q ss_pred             HHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCV   99 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~   99 (253)
                      |..+.++|++.+.||+|+||.++..         +++.||+|+++.. .....+.+.+|+.++..+ +|+||+++++++.
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            4455678999999999999996542         3468999999754 233446788999999999 8999999999886


Q ss_pred             ec-CeeEEEEeeCCCCChhhhccC
Q 043709          100 EK-GVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus       100 ~~-~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      .. ..++++|||+++|+|.+++..
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~  105 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRS  105 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHh
Confidence            54 678999999999999988743

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.93  E-value=5.4e-26  Score=183.20  Aligned_cols=188  Identities=27%  Similarity=0.397  Sum_probs=132.7

Q ss_pred             hcCccccCccccccccceEee---------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..+|+..+.||+|+||.++..         ++..+|+|.+........+.+.+|+++++.++|+||+++++++...+..+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            457888999999999996542         35679999988666666778999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCc------------CCCCccceeee------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANK------------GRLGWGTRVRI------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~------------~~~~~~~~~~i------------------------------------  137 (253)
                      ++|||+++|+|.+++......            ..+.+.....+                                    
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL  163 (280)
T cd05092          84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKI  163 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEE
Confidence            999999999999887542210            01111111110                                    


Q ss_pred             -------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhh
Q 043709          138 -------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNL  185 (253)
Q Consensus       138 -------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~  185 (253)
                                                     ......++.++|||||||++|||++ |..||.....  .......    
T Consensus       164 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~----  237 (280)
T cd05092         164 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--TEAIECI----  237 (280)
T ss_pred             CCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--HHHHHHH----
Confidence                                           1122346778999999999999998 7777643221  1111110    


Q ss_pred             hcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          186 WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                       ..+..         ...+...+..+.+++.+||+.||.+||++.+|++.|++
T Consensus       238 -~~~~~---------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         238 -TQGRE---------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             -HcCcc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence             01100         11112234567889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=1e-25  Score=185.96  Aligned_cols=87  Identities=23%  Similarity=0.239  Sum_probs=75.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .++..+|+|.+... .....+.+.+|+++++.++||||+++++++...+.++++||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence            46899999999999999554    46788999988754 33445679999999999999999999999999999999999


Q ss_pred             eCCCCChhhhcc
Q 043709          110 HMPNKSLDYFLF  121 (253)
Q Consensus       110 ~~~~g~L~~~l~  121 (253)
                      |+.+|+|.+++.
T Consensus        84 ~~~~~~L~~~l~   95 (333)
T cd06650          84 HMDGGSLDQVLK   95 (333)
T ss_pred             cCCCCcHHHHHH
Confidence            999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.93  E-value=6.1e-26  Score=183.10  Aligned_cols=187  Identities=26%  Similarity=0.372  Sum_probs=130.9

Q ss_pred             cCccccCccccccccceEe--------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ++|++.+.||+|+||.+++        ..+..+|+|.+... .......+.+|+.+++.++||||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            5688889999999999654        24578999999753 33444678899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCc--------------CCCCccceeee-----------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANK--------------GRLGWGTRVRI-----------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~--------------~~~~~~~~~~i-----------------------------------  137 (253)
                      +|||+++|+|.+++......              ..+.+.....+                                   
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k  164 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK  164 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence            99999999999987422110              00111100000                                   


Q ss_pred             --------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHh
Q 043709          138 --------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 --------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                      ......++.++|||||||++|||++ |..||.....  ..+....   
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~---  239 (283)
T cd05090         165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMV---  239 (283)
T ss_pred             eccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH---
Confidence                                            0122346778999999999999998 7777754321  1111111   


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                        ......         ......+..+.+++.+||+.+|.+||++.+|++.|++
T Consensus       240 --~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         240 --RKRQLL---------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             --HcCCcC---------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence              111111         1112234567888899999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.93  E-value=5.8e-26  Score=183.87  Aligned_cols=189  Identities=28%  Similarity=0.434  Sum_probs=131.7

Q ss_pred             CccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           37 NFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      +|++.+.||+|+||.+++.         ....+|+|.+... .....+.+.+|+.+++.++||||+++++.+..++..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            4788899999999996552         2246889888754 23345678999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcC---------------------CCCccceeee----------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKG---------------------RLGWGTRVRI----------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~---------------------~~~~~~~~~i----------------------------  137 (253)
                      ++||+.+|+|.+++.......                     .+.+.....+                            
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence            999999999999875321110                     0011100000                            


Q ss_pred             ---------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcch
Q 043709          138 ---------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTL  177 (253)
Q Consensus       138 ---------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~  177 (253)
                                                             ......++.++||||||+++|||++ |..||.....  ..+
T Consensus       161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~  238 (290)
T cd05045         161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP--ERL  238 (290)
T ss_pred             cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--HHH
Confidence                                                   0112235678999999999999998 8888753321  111


Q ss_pred             hhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          178 LGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ..     .....         ............+.+++.+||+.+|++||++.++++.|+++..
T Consensus       239 ~~-----~~~~~---------~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         239 FN-----LLKTG---------YRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HH-----HHhCC---------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            11     11110         1111122334578889999999999999999999999998873

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.93  E-value=3.9e-26  Score=187.94  Aligned_cols=88  Identities=25%  Similarity=0.377  Sum_probs=79.1

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ...++|+++..||+|+||.|++    .+|+.+|+|++++.   ....++....|-.+|....+|+||+++..|.+...+|
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence            3557899999999999999665    68999999999875   4566677889999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhc
Q 043709          106 LIYEHMPNKSLDYFL  120 (253)
Q Consensus       106 lv~e~~~~g~L~~~l  120 (253)
                      |||||.+|||+..+|
T Consensus       218 LiMEylPGGD~mTLL  232 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLL  232 (550)
T ss_pred             EEEEecCCccHHHHH
Confidence            999999999999988

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.2e-25  Score=185.54  Aligned_cols=188  Identities=15%  Similarity=0.151  Sum_probs=131.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++...   .......+.+|+.++..++||||+++++++...+..++||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            4689999999999999654    46889999999754   2234567889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++.....   +.......+                                                   
T Consensus        81 e~~~g~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~  157 (333)
T cd05600          81 EYVPGGDFRTLLNNLGV---LSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS  157 (333)
T ss_pred             eCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCC
Confidence            99999999998843211   111100000                                                   


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++|||||||++|||++|..||.......  ....+    .....   .............
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~i----~~~~~---~~~~~~~~~~~~~  228 (333)
T cd05600         158 VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE--TWENL----KYWKE---TLQRPVYDDPRFN  228 (333)
T ss_pred             cccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH--HHHHH----Hhccc---cccCCCCCccccc
Confidence                       1223457889999999999999999999986443211  11111    00000   0000001111123


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ....+.+++.+||..+|.+||++.++++.
T Consensus       229 ~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         229 LSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             cCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            45677888899999999999999999854

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.93  E-value=4.6e-26  Score=181.24  Aligned_cols=183  Identities=27%  Similarity=0.386  Sum_probs=128.5

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      ++|++.+.||+|+||.++.   ..+..+|+|.+.... ...+.+.+|+.+++.++||||+++++++...+..+++|||+.
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            4688899999999999554   234569999987532 334678999999999999999999999998889999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|.+++.....  .+.+.....+                                                       
T Consensus        83 ~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05113          83 NGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG  160 (256)
T ss_pred             CCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence            9999998853211  1121111111                                                       


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                 ......++.++|||||||++|||++ |..||......  ......    . .+..         .....
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~----~-~~~~---------~~~~~  224 (256)
T cd05113         161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKV----S-QGLR---------LYRPH  224 (256)
T ss_pred             CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHH----h-cCCC---------CCCCC
Confidence                       0112346778999999999999998 88887533321  111111    1 1100         00111


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      .....+.+++.+||..+|++||++.+|++.|+
T Consensus       225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         225 LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            12467788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=2.7e-26  Score=191.03  Aligned_cols=200  Identities=23%  Similarity=0.308  Sum_probs=141.5

Q ss_pred             CCCCcccccHHHHH---HHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccC
Q 043709           19 KESCIPFFSLASIS---AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQD   88 (253)
Q Consensus        19 ~~~~~~~~~~~~l~---~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H   88 (253)
                      ..+.++-..+.++.   .+.+-|+.++.||.|+||.||.    .+.+.||||+++-.   +.+.++.+++|++.|++++|
T Consensus         6 r~GslKDPeiA~LF~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H   85 (948)
T KOG0577|consen    6 RPGSLKDPEIADLFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH   85 (948)
T ss_pred             CCCCCCCchHHHHHccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC
Confidence            34444555566655   3556688899999999999776    56788999999744   56778899999999999999


Q ss_pred             CCcceEeEEEEecCeeEEEEeeCCCCChhhhccC--------------------------------CCCc----------
Q 043709           89 INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD--------------------------------PANK----------  126 (253)
Q Consensus        89 ~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~--------------------------------~~~~----------  126 (253)
                      ||++.+.|++......|+|||||- |+-.+++.-                                .-+.          
T Consensus        86 PntieYkgCyLre~TaWLVMEYCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~  164 (948)
T KOG0577|consen   86 PNTIEYKGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGL  164 (948)
T ss_pred             CCcccccceeeccchHHHHHHHHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCe
Confidence            999999999999999999999998 476666511                                0111          


Q ss_pred             -------------------CCCCccceeee-eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh
Q 043709          127 -------------------GRLGWGTRVRI-YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW  186 (253)
Q Consensus       127 -------------------~~~~~~~~~~i-~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~  186 (253)
                                         ++..|..+..| ....+.|+-++||||||+++.||..+++|.+..  +.+..+.++     
T Consensus       165 VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnM--NAMSALYHI-----  237 (948)
T KOG0577|consen  165 VKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM--NAMSALYHI-----  237 (948)
T ss_pred             eeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCc--hHHHHHHHH-----
Confidence                               11122222211 446788999999999999999999999996533  222222222     


Q ss_pred             cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          187 NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+     .|.+..   .+-+..+.+++..||+.-|.+|||.++++.
T Consensus       238 AQNe-----sPtLqs---~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  238 AQNE-----SPTLQS---NEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             HhcC-----CCCCCC---chhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            0111     122222   122345667777799999999999999875

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.93  E-value=9.1e-26  Score=182.54  Aligned_cols=189  Identities=24%  Similarity=0.377  Sum_probs=132.3

Q ss_pred             HhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      ..++|++.+.||+|+||.++.         .++..||+|.+... .......+.+|+.+++.++||||+++++++..++.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            346799999999999999554         14678999998754 33445678999999999999999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcC-------------------CCCccceeee---------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKG-------------------RLGWGTRVRI---------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~-------------------~~~~~~~~~i---------------------------  137 (253)
                      .++++||+++|+|.+++.......                   .+.+.....+                           
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil  162 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL  162 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence            999999999999999885321100                   0011100110                           


Q ss_pred             ----------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcc
Q 043709          138 ----------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLT  176 (253)
Q Consensus       138 ----------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~  176 (253)
                                                              ......++.++|||||||++|||++ |..||......  .
T Consensus       163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~--~  240 (288)
T cd05050         163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE--E  240 (288)
T ss_pred             ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--H
Confidence                                                    0112346678999999999999997 66776533221  1


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ....     ...+....         .....+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus       241 ~~~~-----~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         241 VIYY-----VRDGNVLS---------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHH-----HhcCCCCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            1111     11111111         111234678889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.92  E-value=2.1e-25  Score=178.31  Aligned_cols=192  Identities=18%  Similarity=0.218  Sum_probs=135.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .+|++.+.||+|+||.+++    .++..+|||.+...   .....+.+.+|+.+++.+.||||+++++++...+..+++|
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            4688889999999999554    57889999988643   2334467899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCC-cCCCCccceeee--------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPAN-KGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||+++++|.+++..... ...+++.....+                                                  
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc
Confidence            99999999988742111 111222111111                                                  


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ......++.++|+||||+++|+|++|..||.............+          ...   .....
T Consensus       162 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----------~~~---~~~~~  228 (267)
T cd08229         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI----------EQC---DYPPL  228 (267)
T ss_pred             ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhh----------hcC---CCCCC
Confidence                           11123456689999999999999999999864332211111111          000   01111


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ........+.+++.+||..+|.+|||+.+|++.+++..
T Consensus       229 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         229 PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            11234567888999999999999999999999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.92  E-value=9.7e-26  Score=178.86  Aligned_cols=178  Identities=21%  Similarity=0.281  Sum_probs=125.2

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      +.||+|+||.++.    .+++.+|+|.+... ..+....+.+|+.+++.++||||+++++++...+..+++|||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            4689999999654    46889999988654 334456799999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCcCCCCccceeee-----------------------------------------------------------
Q 043709          117 DYFLFDPANKGRLGWGTRVRI-----------------------------------------------------------  137 (253)
Q Consensus       117 ~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------------  137 (253)
                      .+++.....  .+.+.....+                                                           
T Consensus        81 ~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  158 (252)
T cd05084          81 LTFLRTEGP--RLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI  158 (252)
T ss_pred             HHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence            998843211  1111111000                                                           


Q ss_pred             --------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 --------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 --------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                              ....+.++.++||||||+++||+++ |..||.....  ......    ...          ..........+
T Consensus       159 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--~~~~~~----~~~----------~~~~~~~~~~~  222 (252)
T cd05084         159 PVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--QQTREA----IEQ----------GVRLPCPELCP  222 (252)
T ss_pred             ceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--HHHHHH----HHc----------CCCCCCcccCC
Confidence                    0122345667899999999999998 7777643221  111111    100          01111122334


Q ss_pred             HHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          209 KRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ..+.+++.+||+.+|++|||+.++++.|+
T Consensus       223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            57888999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.92  E-value=1.2e-26  Score=185.58  Aligned_cols=182  Identities=18%  Similarity=0.274  Sum_probs=131.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .+|++.+.||+|.||++.+    ..|+.||||.++++   +..+.-.+.+|+++|+.|+||||++++.+|.+++.+.|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            4799999999999999555    57899999999876   3445556889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCC-------------------------------CCcc--ceeee------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGR-------------------------------LGWG--TRVRI------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~-------------------------------~~~~--~~~~i------------------  137 (253)
                      ||..+|+|.+|+.+......                               +-+.  ....|                  
T Consensus       133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTF  212 (668)
T KOG0611|consen  133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTF  212 (668)
T ss_pred             EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHh
Confidence            99999999999943221100                               0000  00011                  


Q ss_pred             ----------eeecCcc-ccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 ----------YALHGVF-SIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 ----------~~~~~~~-~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                ...+.+| ++.+|.||||++||-|+.|..||++....  .++..             +....++..   .
T Consensus       213 CGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk--~lvrQ-------------Is~GaYrEP---~  274 (668)
T KOG0611|consen  213 CGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK--RLVRQ-------------ISRGAYREP---E  274 (668)
T ss_pred             cCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH--HHHHH-------------hhcccccCC---C
Confidence                      2333445 57899999999999999999999855431  11111             111112111   1


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      .+.....||.++|..||++|.|+.+|...
T Consensus       275 ~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  275 TPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             CCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence            22345667777999999999999999853

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.92  E-value=7.3e-26  Score=181.16  Aligned_cols=188  Identities=22%  Similarity=0.364  Sum_probs=132.9

Q ss_pred             hcCccccCccccccccceEee----CC---CEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL----NG---EQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~----~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|+..+.||+|+||.+++.    ++   ..+|+|.+... .....+.+..|+.+++.++||||+++++++...+..++
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            357888899999999995542    23   36999998754 34445779999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+++++|.+++.....  .+.+.....+                                                 
T Consensus        84 v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  161 (268)
T cd05063          84 ITEYMENGALDKYLRDHDG--EFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP  161 (268)
T ss_pred             EEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence            9999999999988843211  1111111111                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++||+++ |..||.....  ..+...+    . ..        
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i----~-~~--------  226 (268)
T cd05063         162 EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAI----N-DG--------  226 (268)
T ss_pred             ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHH----h-cC--------
Confidence                               0112345678999999999999997 8888753321  1111111    1 11        


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                       .........+..+.+++.+||..+|++||++.+|++.|++++
T Consensus       227 -~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~  268 (268)
T cd05063         227 -FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL  268 (268)
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence             011111233467889999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.92  E-value=3.3e-25  Score=179.89  Aligned_cols=195  Identities=29%  Similarity=0.438  Sum_probs=131.4

Q ss_pred             hcCccccCccccccccceEee--------------------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcce
Q 043709           35 TDNFSMENKLGEGGFGPGKLL--------------------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVR   93 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~--------------------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~   93 (253)
                      .++|++.+.||+|+||.+++.                    .+..||+|.+... .....+.+.+|+.+++.++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            467999999999999996541                    2346899998754 3345678899999999999999999


Q ss_pred             EeEEEEecCeeEEEEeeCCCCChhhhccCCCCc--------CCCCccceeee----------------------------
Q 043709           94 IIGCCVEKGVKILIYEHMPNKSLDYFLFDPANK--------GRLGWGTRVRI----------------------------  137 (253)
Q Consensus        94 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------~~~~~~~~~~i----------------------------  137 (253)
                      +++++..++..+++|||+.+++|.+++......        ..+.+.....+                            
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili  163 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence            999999999999999999999999887542200        01111111000                            


Q ss_pred             ---------------------------------------eeecCccccccceeehhHHHHHHHh--CCCCcCcCCCCCcc
Q 043709          138 ---------------------------------------YALHGVFSIKSDVFSFGVLLLETLS--SKKNAHFYNTNSLT  176 (253)
Q Consensus       138 ---------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~--~~~p~~~~~~~~~~  176 (253)
                                                             ......++.++|||||||++||+++  +..||....  ...
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~  241 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT--DQQ  241 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--hHH
Confidence                                                   1112356788999999999999998  555554221  111


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ..... .........      ..........+..+.+++.+||+.+|.+|||+.+|++.|+.
T Consensus       242 ~~~~~-~~~~~~~~~------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         242 VIENA-GHFFRDDGR------QIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             HHHHH-Hhccccccc------cccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence            21111 011000000      00011112234678899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.92  E-value=6.4e-26  Score=185.11  Aligned_cols=196  Identities=23%  Similarity=0.344  Sum_probs=136.6

Q ss_pred             HHHHhcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGC   97 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~   97 (253)
                      +....++|.+.+.||+|+||.++..           +...+|+|.+... .......+..|+.+++.+ +||||++++++
T Consensus        13 ~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (307)
T cd05098          13 WEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   92 (307)
T ss_pred             ceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            3444568999999999999996542           2246999999754 234456788999999999 79999999999


Q ss_pred             EEecCeeEEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee---------------------------
Q 043709           98 CVEKGVKILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI---------------------------  137 (253)
Q Consensus        98 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i---------------------------  137 (253)
                      +...+..+++|||+++|+|.+++......             ..+.+.....+                           
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  172 (307)
T cd05098          93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  172 (307)
T ss_pred             EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence            99999999999999999999998542211             01111111111                           


Q ss_pred             ----------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcc
Q 043709          138 ----------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLT  176 (253)
Q Consensus       138 ----------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~  176 (253)
                                                              ......++.++|||||||++|||++ |..||.....  ..
T Consensus       173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--~~  250 (307)
T cd05098         173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EE  250 (307)
T ss_pred             EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--HH
Confidence                                                    0112336678999999999999998 7777643221  11


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      +.    .... ..         ...+........+.+++.+||..+|++|||+.+|++.|+++...
T Consensus       251 ~~----~~~~-~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~  302 (307)
T cd05098         251 LF----KLLK-EG---------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL  302 (307)
T ss_pred             HH----HHHH-cC---------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence            11    1111 11         11111223346778899999999999999999999999998743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.92  E-value=1.4e-25  Score=182.21  Aligned_cols=191  Identities=25%  Similarity=0.368  Sum_probs=133.0

Q ss_pred             cCccccCccccccccceEe----eCC--CEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNG--EQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ++|++.+.||+|+||.+++    .++  ..+++|.++.. .....+.+.+|+.++.++ +||||+++++++...+.++++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            5789999999999999554    233  34788888743 334456789999999999 799999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcC-------------CCCccceeee-------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKG-------------RLGWGTRVRI-------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~-------------~~~~~~~~~i-------------------------------------  137 (253)
                      +||+++|+|.++++......             .+.+.....+                                     
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~  161 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA  161 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence            99999999998885421100             0111111100                                     


Q ss_pred             ---------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCC
Q 043709          138 ---------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ---------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~  189 (253)
                                                 ......++.++|||||||++|||++ |..||.......  .....     ..+
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--~~~~~-----~~~  234 (297)
T cd05089         162 DFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--LYEKL-----PQG  234 (297)
T ss_pred             CcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH-----hcC
Confidence                                       1122346788999999999999997 888875432211  11110     000


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                               .....+......+.+++.+||+.+|.+||+++++++.|+++...
T Consensus       235 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         235 ---------YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence                     11111122345678899999999999999999999999888743

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.92  E-value=1.1e-25  Score=185.50  Aligned_cols=179  Identities=16%  Similarity=0.185  Sum_probs=127.6

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++.+..++..+++|
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            5789999999999999554    46889999999753   2234567899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee---------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI---------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i---------------  137 (253)
                      ||+.+|+|.+++.+...   +......                                    .+               
T Consensus        98 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  174 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGR---FPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFT  174 (329)
T ss_pred             cCCCCChHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcce
Confidence            99999999988743221   1111000                                    00               


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++|||||||++|||++|..||.....  .....     ....+..          ..+..
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~-----~i~~~~~----------~~p~~  237 (329)
T PTZ00263        175 LCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--FRIYE-----KILAGRL----------KFPNW  237 (329)
T ss_pred             ecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--HHHHH-----HHhcCCc----------CCCCC
Confidence                       12233467899999999999999999999864321  11111     1111110          01111


Q ss_pred             HHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      ....+.+++.+||+.||.+||+     ++++++
T Consensus       238 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        238 FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            2346778889999999999997     677763

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=9.5e-26  Score=181.82  Aligned_cols=201  Identities=24%  Similarity=0.364  Sum_probs=133.0

Q ss_pred             cCccccCccccccccceEee--------CCCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEe--cCee
Q 043709           36 DNFSMENKLGEGGFGPGKLL--------NGEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~  104 (253)
                      ..|++.+.||+|+||.+++.        ++..+|||.+...... ..+.+.+|+.+++.+.||||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            45778899999999995542        3678999999865433 46789999999999999999999999877  5579


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      +++|||+++|+|.+++.....  .+.+.....+                                               
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence            999999999999998843221  1111111111                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++||||||+++|||++|..|+.........+.... ..............
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  240 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA-QGQMIVTRLLELLK  240 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccc-cccccHHHHHHHHH
Confidence                                 01123456789999999999999999988754332211100000 00000000000001


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ...........+..+.+++.+||..+|.+||++.+|++.|+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            1111111122346788899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.92  E-value=1.2e-25  Score=175.54  Aligned_cols=211  Identities=16%  Similarity=0.114  Sum_probs=142.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccccc--ccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG--QGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~l  106 (253)
                      .++|+++..|++|+||.||.    .+++.||+|+++....  .---.-++|+.+|.+++|||||++..+.+..  +.+||
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            35788999999999999665    5788999999987531  1123578999999999999999999988754  57999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |||||.+ ||..++.+....  +.......+                                                 
T Consensus       155 VMe~~Eh-DLksl~d~m~q~--F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  155 VMEYVEH-DLKSLMETMKQP--FLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             eHHHHHh-hHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            9999996 999998654411  111110000                                                 


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh--hcCCC--------
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL--WNDGS--------  190 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~--------  190 (253)
                                       .+....|++++|+||+|||+.|++++++-|.+.....  .+..++..+  .....        
T Consensus       232 k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d--Ql~~If~llGtPte~iwpg~~~lp  309 (419)
T KOG0663|consen  232 KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID--QLDKIFKLLGTPSEAIWPGYSELP  309 (419)
T ss_pred             ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH--HHHHHHHHhCCCccccCCCccccc
Confidence                             3445569999999999999999999998876554321  122221111  11111        


Q ss_pred             ------ccccccccCCCCCCHH-HHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCC
Q 043709          191 ------LWDLMDPMLQTEASYP-ILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFL  252 (253)
Q Consensus       191 ------~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~  252 (253)
                            ........++..+... ......+|+...+..||.+|.|+++-++  ++...+.|.|-.|.++
T Consensus       310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~--h~~F~e~P~p~~P~~~  376 (419)
T KOG0663|consen  310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK--HEYFRETPLPIDPSMF  376 (419)
T ss_pred             hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc--ccccccCCCCCChhhc
Confidence                  1111112222222211 3466778888899999999999999775  5666666666666553

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.92  E-value=9.6e-26  Score=181.63  Aligned_cols=193  Identities=23%  Similarity=0.343  Sum_probs=135.2

Q ss_pred             HhcCccccCccccccccceEe---eC-----CCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEe-cCe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LN-----GEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-KGV  103 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-~~~  103 (253)
                      ..++|++.+.||+|+||.++.   ..     +..|++|.+... .....+.+.+|+.+++.++||||+++++++.. ...
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   83 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP   83 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            456899999999999999544   22     578999988754 34445778999999999999999999998876 467


Q ss_pred             eEEEEeeCCCCChhhhccCCCCc-----CCCCccceeee-----------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANK-----GRLGWGTRVRI-----------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~-----~~~~~~~~~~i-----------------------------------------  137 (253)
                      .+++++|+++|+|..++......     ..+.+.....+                                         
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~  163 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNAL  163 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCC
Confidence            89999999999999988542211     11222211111                                         


Q ss_pred             --------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCC
Q 043709          138 --------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGS  190 (253)
Q Consensus       138 --------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~  190 (253)
                                                ......++.++|||||||++||+++ |..||.....  ..+....     ..+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~-----~~~~  236 (280)
T cd05043         164 SRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYL-----KDGY  236 (280)
T ss_pred             cccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHH-----HcCC
Confidence                                      0112336678999999999999999 8888754321  1121111     1110


Q ss_pred             ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          191 LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                               ........+..+.+++.+||..+|++|||+.++++.|+++...
T Consensus       237 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         237 ---------RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             ---------CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence                     0011112335678899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.92  E-value=1.3e-25  Score=178.94  Aligned_cols=187  Identities=27%  Similarity=0.379  Sum_probs=131.6

Q ss_pred             HHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           33 AATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +..++|++.+.||+|+||.+++   ..++.||+|.+.... ...+.+.+|+.+++.++||||+++++++. .+..+++||
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e   80 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITE   80 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEE
Confidence            4567899999999999999554   567889999997543 33467899999999999999999999874 457899999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+.+|+|.+++..... ..+.+.....+                                                    
T Consensus        81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05067          81 YMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             cCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc
Confidence            9999999998743221 11222111111                                                    


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                    ......++.++||||||+++||+++ |+.||.....  .......     ...         ....
T Consensus       160 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~-----~~~---------~~~~  223 (260)
T cd05067         160 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--PEVIQNL-----ERG---------YRMP  223 (260)
T ss_pred             ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHH-----HcC---------CCCC
Confidence                          0112335678999999999999999 8888763321  1111111     011         0011


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      .....+..+.+++.+||..+|++||+++++++.|++
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         224 RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            111233568889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.92  E-value=9.5e-26  Score=186.86  Aligned_cols=90  Identities=23%  Similarity=0.414  Sum_probs=73.8

Q ss_pred             HHhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEec
Q 043709           33 AATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEK  101 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~  101 (253)
                      .+.++|++.+.||+|+||.+++         .+++.||||.++.. .......+.+|+.++..+ +||||+++++++...
T Consensus         4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (343)
T cd05103           4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   83 (343)
T ss_pred             cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence            3456899999999999999654         34678999999754 233456788999999999 689999999988654


Q ss_pred             -CeeEEEEeeCCCCChhhhccC
Q 043709          102 -GVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus       102 -~~~~lv~e~~~~g~L~~~l~~  122 (253)
                       ...+++||||++|+|.++++.
T Consensus        84 ~~~~~lv~ey~~~g~L~~~i~~  105 (343)
T cd05103          84 GGPLMVIVEFCKFGNLSNYLRS  105 (343)
T ss_pred             CCceEEEEeccCCCcHHHHHHh
Confidence             568999999999999998853

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.92  E-value=1.3e-25  Score=180.61  Aligned_cols=189  Identities=26%  Similarity=0.376  Sum_probs=131.8

Q ss_pred             HhcCccccCccccccccceEe----e-----CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----L-----NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      .+++|.+.+.||+|++|.++.    .     .+..||+|.+... .......+.+|+.+++.++|+||+++++++.+.+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (277)
T cd05036           4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP   83 (277)
T ss_pred             CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence            346799999999999999553    2     4567999988754 23344679999999999999999999999999899


Q ss_pred             eEEEEeeCCCCChhhhccCCCCc----CCCCccceeee------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANK----GRLGWGTRVRI------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~~i------------------------------------------  137 (253)
                      .+++|||+.+|+|.+++......    ..+.+.....+                                          
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df  163 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence            99999999999999987432210    01111110000                                          


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                                  ......++.++|||||||++|||++ |..||.....  ..+...+    . .
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--~~~~~~~----~-~  236 (277)
T cd05036         164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--QEVMEFV----T-G  236 (277)
T ss_pred             ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH----H-c
Confidence                                        0112346778999999999999997 7888753322  1111111    0 1


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ..         ....+...+..+.+++.+||+.+|++|||+.+|++.|+.
T Consensus       237 ~~---------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~  277 (277)
T cd05036         237 GG---------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY  277 (277)
T ss_pred             CC---------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence            10         011122334578889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.1e-25  Score=178.88  Aligned_cols=187  Identities=25%  Similarity=0.334  Sum_probs=134.3

Q ss_pred             hcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           35 TDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .++|++.+.||+|+||.++.  ..++.||+|.+..... ..+.+.+|+.+++.++|+||+++++++...+..+++|||++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            45789999999999999554  5688999999986533 56789999999999999999999999998899999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +++|.+++...... .+.+.....+                                                       
T Consensus        84 ~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  162 (256)
T cd05039          84 KGSLVDYLRSRGRA-VITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP  162 (256)
T ss_pred             CCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence            99999987432210 1111111111                                                       


Q ss_pred             -------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHH
Q 043709          138 -------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILK  209 (253)
Q Consensus       138 -------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (253)
                             ......++.++||||||+++||+++ |..||.....  ..+...+    . ..         .........+.
T Consensus       163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~----~-~~---------~~~~~~~~~~~  226 (256)
T cd05039         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPHV----E-KG---------YRMEAPEGCPP  226 (256)
T ss_pred             ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH----h-cC---------CCCCCccCCCH
Confidence                   1122446678999999999999997 8888753321  1111111    0 00         01111122346


Q ss_pred             HHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          210 RYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       210 ~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      .+.+++.+||..+|++||++.++++.|+.+
T Consensus       227 ~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         227 EVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            778899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=1.7e-25  Score=180.65  Aligned_cols=191  Identities=26%  Similarity=0.358  Sum_probs=130.8

Q ss_pred             CccccCccccccccceEe--------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeE
Q 043709           37 NFSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKI  105 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~  105 (253)
                      .|++.+.||+|+||.++.        .++..||+|.+... .....+.+.+|+.+++.+.||||+++++++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            478889999999999643        35788999999754 334456799999999999999999999998765  5689


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++|||+++++|.+++.....  .+++.....+                                                
T Consensus        85 lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~  162 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  162 (284)
T ss_pred             EEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence            99999999999998843211  1111111111                                                


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC---------cchhhhhhHhhhcC
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS---------LTLLGYVIWNLWND  188 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~---------~~~~~~~~~~~~~~  188 (253)
                                          ...+..++.++|||||||++||++++..|........         ....... ......
T Consensus       163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  241 (284)
T cd05079         163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL-VRVLEE  241 (284)
T ss_pred             ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH-HHHHHc
Confidence                                1122446788999999999999999876543211100         0000000 000000


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      +         ...+.....+..+.+++.+||+.+|++||++.++++.|+++
T Consensus       242 ~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         242 G---------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             C---------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            1         11111223456788999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.92  E-value=3e-25  Score=177.50  Aligned_cols=189  Identities=16%  Similarity=0.280  Sum_probs=129.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++..........+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            45799999999999999554    46788999999765444556788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcC------------------------------------------CCCccceeee-----------
Q 043709          111 MPNKSLDYFLFDPANKG------------------------------------------RLGWGTRVRI-----------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~------------------------------------------~~~~~~~~~i-----------  137 (253)
                      +++|+|.++++......                                          ..++.....+           
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd06646          88 CGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI  167 (267)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccc
Confidence            99999998773221100                                          0000000000           


Q ss_pred             ---------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ---------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ---------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                               ..   ....++.++|+||+||++|||++|..||..........       ......   ...+...  ...
T Consensus       168 ~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~-------~~~~~~---~~~~~~~--~~~  235 (267)
T cd06646         168 GTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF-------LMSKSN---FQPPKLK--DKT  235 (267)
T ss_pred             cCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe-------eeecCC---CCCCCCc--ccc
Confidence                     00   12335678999999999999999999975332211000       000000   0001111  111


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ..+..+.+++.+||..+|++||+++++++.
T Consensus       236 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         236 KWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             ccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            234578889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.92  E-value=2e-25  Score=178.65  Aligned_cols=186  Identities=22%  Similarity=0.341  Sum_probs=131.3

Q ss_pred             cCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .+|++.+.||+|+||.+++.       .+..+|+|.+... .....+.+.+|+.+++.++||||+++++++..++..+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            57889999999999995541       2337999998754 233456789999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+++|+|.+++.....  .+++.....+                                                  
T Consensus        84 ~e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd05066          84 TEYMENGSLDAFLRKHDG--QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  161 (267)
T ss_pred             EEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence            999999999998843211  1111111110                                                  


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++|+||||+++||+++ |..||......  ......    . ..  ..     
T Consensus       162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~----~-~~--~~-----  227 (267)
T cd05066         162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAI----E-EG--YR-----  227 (267)
T ss_pred             eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHH----h-CC--Cc-----
Confidence                              1112346778999999999999886 88887643221  111111    0 11  00     


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                        .......+..+.+++.+||+.+|.+||++.++++.|+++
T Consensus       228 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         228 --LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             --CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence              111122345678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.92  E-value=2.7e-25  Score=178.21  Aligned_cols=186  Identities=25%  Similarity=0.394  Sum_probs=127.6

Q ss_pred             ccccCccccccccceEee-------CCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe-----
Q 043709           38 FSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV-----  103 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~-----  103 (253)
                      |.+.+.||+|+||.++..       .+..||+|.++..  .....+.+.+|+..++.++||||+++++++.....     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            567899999999995531       2467999999754  23345679999999999999999999999876543     


Q ss_pred             -eEEEEeeCCCCChhhhccCCCC---cCCCCccceeee------------------------------------------
Q 043709          104 -KILIYEHMPNKSLDYFLFDPAN---KGRLGWGTRVRI------------------------------------------  137 (253)
Q Consensus       104 -~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~i------------------------------------------  137 (253)
                       .++++||+++|+|..++.....   ...+++.....+                                          
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence             7999999999999888733110   001111100000                                          


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                               ......++.++|||||||++|||++ |..||.....  ..+....    . .+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~~~----~-~~~~  233 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYDYL----R-HGNR  233 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----H-cCCC
Confidence                                     0112346678999999999999999 7777653321  1121111    1 1111


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      .         ..+...+..+.+++.+||+.||.+||++.++++.|+++
T Consensus       234 ~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         234 L---------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             C---------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1         11123445788899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.92  E-value=2.4e-25  Score=168.79  Aligned_cols=208  Identities=18%  Similarity=0.180  Sum_probs=141.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .+|...+.+|+|+||.+++    .+|+.||||+++...  ..-....++|+..|+.++|+||+.+++++.+.+.+-+|+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            4688889999999999665    689999999998652  2223468999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |++. ||+.++++....  +.......+                                                    
T Consensus        82 fm~t-dLe~vIkd~~i~--l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~  158 (318)
T KOG0659|consen   82 FMPT-DLEVVIKDKNII--LSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ  158 (318)
T ss_pred             eccc-cHHHHhcccccc--cCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccc
Confidence            9996 898888432211  111100000                                                    


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh--hcCCCccccc---c--
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL--WNDGSLWDLM---D--  196 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~--  196 (253)
                                    ......|+..+|+||.||++.||+.|.+-|. ...+-++ +..+...+  .....++++.   +  
T Consensus       159 ~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp-G~sDidQ-L~~If~~LGTP~~~~WP~~~~lpdY~  236 (318)
T KOG0659|consen  159 THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP-GDSDIDQ-LSKIFRALGTPTPDQWPEMTSLPDYV  236 (318)
T ss_pred             ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC-CCchHHH-HHHHHHHcCCCCcccCccccccccHH
Confidence                          3455679999999999999999999875544 3333222 22221222  2222222211   1  


Q ss_pred             ------ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCC
Q 043709          197 ------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSA  250 (253)
Q Consensus       197 ------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~  250 (253)
                            ..............+++|+..+|..||.+|.+++|.++  .....+.|.|..|.
T Consensus       237 ~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~--~~yf~~~P~pt~~~  294 (318)
T KOG0659|consen  237 KIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK--HPYFKSLPLPTPPS  294 (318)
T ss_pred             HHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc--chhhhcCCCCCChh
Confidence                  11111123345667899999999999999999999875  34455566665543

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=7.4e-26  Score=181.93  Aligned_cols=189  Identities=25%  Similarity=0.380  Sum_probs=132.1

Q ss_pred             HhcCccccCccccccccceEe---------eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      ..++|++.+.||+|+||.++.         .++..||+|.+.... ......+.+|+.+++.++||||+++++++...+.
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            456899999999999999654         123679999987542 3445678899999999999999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcC-------CCCccceeee---------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKG-------RLGWGTRVRI---------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~-------~~~~~~~~~i---------------------------------------  137 (253)
                      .+++|||+++|+|.+++.......       .+.+.....+                                       
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df  163 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence            999999999999998875321110       0111111110                                       


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                                  ......++.++|||||||++||+++ |..||.....  .......    . .
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~----~-~  236 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVLKFV----I-D  236 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHHHHH----h-c
Confidence                                        1122446778999999999999998 7777653221  1111111    1 1


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      +....         .+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       237 ~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         237 GGHLD---------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             CCCCC---------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            11111         111124678889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.92  E-value=1.9e-25  Score=178.86  Aligned_cols=186  Identities=22%  Similarity=0.336  Sum_probs=130.8

Q ss_pred             cCccccCccccccccceEe----eCC---CEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNG---EQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ++|++.+.||+|+||.+++    .++   ..||||.+... .....+.+..|+.+++.++||||+++++++..++..+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            4578889999999999554    222   36999998754 344567899999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+++|+|.+++.....  .+.+.....+                                                  
T Consensus        84 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          84 TEFMENGALDSFLRQNDG--QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             EecCCCCcHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence            999999999988853211  1111111100                                                  


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                          ......++.++|||||||++||+++ |..||......  .....+    . ..       
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i----~-~~-------  227 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAI----E-QD-------  227 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHH----H-cC-------
Confidence                                1112345678999999999999886 88887543221  111111    0 00       


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                        .........+..+.+++.+||..+|.+||++.+|+..|+..
T Consensus       228 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         228 --YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             --CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence              00111122345677889999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.92  E-value=1.8e-25  Score=183.11  Aligned_cols=194  Identities=23%  Similarity=0.360  Sum_probs=135.6

Q ss_pred             HHHhcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           32 SAATDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      .....+|.+.+.||+|+||.+++.           ....+|+|.+... .......+.+|+.+++.+ .||||+++++++
T Consensus         8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (314)
T cd05099           8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVC   87 (314)
T ss_pred             cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence            345568899999999999996653           2346999998754 334456789999999999 699999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee----------------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI----------------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i----------------------------  137 (253)
                      ...+.++++|||+++|+|.+++......             ..+.+.....+                            
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill  167 (314)
T cd05099          88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV  167 (314)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence            9989999999999999999988542210             01111111000                            


Q ss_pred             ---------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcch
Q 043709          138 ---------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTL  177 (253)
Q Consensus       138 ---------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~  177 (253)
                                                             ......++.++||||||+++||+++ |..||.....  ..+
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~  245 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--EEL  245 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence                                                   0112346778999999999999999 7777653321  111


Q ss_pred             hhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          178 LGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ....     .....         .......+..+.+++.+||..+|++|||+.++++.|+++..
T Consensus       246 ~~~~-----~~~~~---------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         246 FKLL-----REGHR---------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             HHHH-----HcCCC---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            1111     11110         11122334567789999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.92  E-value=1.4e-25  Score=181.49  Aligned_cols=193  Identities=24%  Similarity=0.388  Sum_probs=133.8

Q ss_pred             HHHhcCccccCccccccccceEee---------CCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEec
Q 043709           32 SAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      .+..++|++.+.||+|+||.+++.         .+..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            345678999999999999996642         24479999886442 23345688999999999999999999999988


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCcC-------CCCccceeee-------------------------------------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANKG-------RLGWGTRVRI-------------------------------------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~~-------~~~~~~~~~i-------------------------------------  137 (253)
                      +..+++|||+++|+|.+++.......       ...+.....+                                     
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~  161 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG  161 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence            99999999999999999985321100       0000000000                                     


Q ss_pred             ------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhh
Q 043709          138 ------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLW  186 (253)
Q Consensus       138 ------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~  186 (253)
                                                    ......++.++|||||||++||+++ +..||.....  ......    ..
T Consensus       162 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--~~~~~~----~~  235 (288)
T cd05061         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKF----VM  235 (288)
T ss_pred             cCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH----HH
Confidence                                          1122346778999999999999998 5667653221  111111    11


Q ss_pred             cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          187 NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                       .+....         ........+.+++.+||+.+|++|||+.++++.|++..
T Consensus       236 -~~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         236 -DGGYLD---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             -cCCCCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence             111111         11122357888999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.92  E-value=2.7e-25  Score=181.10  Aligned_cols=191  Identities=24%  Similarity=0.379  Sum_probs=131.7

Q ss_pred             hcCccccCccccccccceEee----CCC--EEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL----NGE--QVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~----~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|++.+.||+|+||.+++.    ++.  .+|+|.+... .......+.+|+.++.++ +||||+++++++..++.+++
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l   85 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL   85 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence            357889999999999995552    343  4577777643 334456788999999999 89999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcC-------------CCCccceeee------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKG-------------RLGWGTRVRI------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~-------------~~~~~~~~~i------------------------------------  137 (253)
                      +|||+++|+|.++++......             .+.+.....+                                    
T Consensus        86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl  165 (303)
T cd05088          86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKI  165 (303)
T ss_pred             EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEe
Confidence            999999999999885322100             0111111100                                    


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                                  ......++.++|||||||++||+++ |..||......  ......     ..
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~-----~~  238 (303)
T cd05088         166 ADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL-----PQ  238 (303)
T ss_pred             CccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHHH-----hc
Confidence                                        0112335788999999999999998 88887533221  111111     00


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .         ............+.+++.+||+.+|++||++++++..|+.+..
T Consensus       239 ~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~  282 (303)
T cd05088         239 G---------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  282 (303)
T ss_pred             C---------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            0         0111112234567889999999999999999999999888763

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.3e-26  Score=186.77  Aligned_cols=197  Identities=17%  Similarity=0.166  Sum_probs=138.2

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHH-HHHHHHHHHHhcc-CCCcceEeEEEEecC-eeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLE-EFKNEMMLIAKLQ-DINLVRIIGCCVEKG-VKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-H~nIv~~~~~~~~~~-~~~l  106 (253)
                      ..++|.+++.||.|+||.|++    .+++.||||+++..-....+ .-++|+..|+++. |||||++++++.+.+ .+++
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            346799999999999999655    67899999999865333222 3578999999998 999999999998877 9999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||++ .+|.++++++..  .+.......|                                                 
T Consensus        88 VfE~Md-~NLYqLmK~R~r--~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp  164 (538)
T KOG0661|consen   88 VFEFMD-CNLYQLMKDRNR--LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP  164 (538)
T ss_pred             eHHhhh-hhHHHHHhhcCC--cCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCC
Confidence            999998 599999855421  1222111111                                                 


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhh-hHhhhc-------------
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYV-IWNLWN-------------  187 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~-~~~~~~-------------  187 (253)
                                      .+..+.|+.++|+||+||+++|+.+.++-|.+....+. +.... ......             
T Consensus       165 PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq-i~KIc~VLGtP~~~~~~eg~~La~~  243 (538)
T KOG0661|consen  165 PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ-IYKICEVLGTPDKDSWPEGYNLASA  243 (538)
T ss_pred             CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH-HHHHHHHhCCCccccchhHHHHHHH
Confidence                            44566799999999999999999999988876654321 11111 001111             


Q ss_pred             -CCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          188 -DGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       188 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                       .-.++++....+..-. ...+.++.+++.+|++.||.+|||+++.++.
T Consensus       244 mnf~~P~~~~~~l~~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  244 MNFRFPQVKPSPLKDLL-PNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             hccCCCcCCCCChHHhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence             1112222222222111 2366788999999999999999999999874

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.92  E-value=1.5e-25  Score=181.14  Aligned_cols=196  Identities=16%  Similarity=0.162  Sum_probs=128.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            3689999999999999554    46789999999754  23445678899999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |++++++..+.....   .+.......+                                                    
T Consensus        81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  157 (287)
T cd07848          81 YVEKNMLELLEEMPN---GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN  157 (287)
T ss_pred             cCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence            999887765542111   0000000000                                                    


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcch-hhhh--------hHhhhcCCCcccc
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL-LGYV--------IWNLWNDGSLWDL  194 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~  194 (253)
                                    ...+..++.++|||||||++|||++|+.||.......... ....        .............
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07848         158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGL  237 (287)
T ss_pred             ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccc
Confidence                          1223457789999999999999999999987543211100 0000        0000000000000


Q ss_pred             ccccCC------CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          195 MDPMLQ------TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       195 ~~~~~~------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+...      .......+..+.+++.+||+.||++|||++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         238 RFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             ccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            000000      0011124456889999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.92  E-value=7.3e-26  Score=186.53  Aligned_cols=183  Identities=16%  Similarity=0.214  Sum_probs=136.6

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCee
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~  104 (253)
                      ...++|.+++.||+|+|++|.+    .+++.||||++.+.   ....++....|-.+|.+| .||.|++|+..|.+...+
T Consensus        70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL  149 (604)
T KOG0592|consen   70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL  149 (604)
T ss_pred             CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence            3446899999999999999554    67899999999865   455667788999999999 799999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccc------------------------------------eeee-----------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGT------------------------------------RVRI-----------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~------------------------------------~~~i-----------  137 (253)
                      |+|+||+++|+|.++|++-.   .++..+                                    ...|           
T Consensus       150 YFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~  226 (604)
T KOG0592|consen  150 YFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP  226 (604)
T ss_pred             EEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence            99999999999999983311   111000                                    0000           


Q ss_pred             -------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh
Q 043709          138 -------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW  186 (253)
Q Consensus       138 -------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~  186 (253)
                                                     ++.....++.+|+|+|||++|+|+.|.+||.....  ..+...+     
T Consensus       227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--yliFqkI-----  299 (604)
T KOG0592|consen  227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE--YLIFQKI-----  299 (604)
T ss_pred             hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--HHHHHHH-----
Confidence                                           34455678899999999999999999999875433  1111111     


Q ss_pred             cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          187 NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                              ..  +.-+++...+..+.+|+.+.|..||++|+++++|-+.
T Consensus       300 --------~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  300 --------QA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             --------HH--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence                    00  1122233344678888889999999999999988754

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.92  E-value=1.5e-25  Score=182.70  Aligned_cols=192  Identities=23%  Similarity=0.368  Sum_probs=134.6

Q ss_pred             HHhcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCV   99 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~   99 (253)
                      ....+|.+.+.||+|+||.++..           .+..||+|.+... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            44567899999999999996532           2347999998754 334456799999999999 7999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCCCcC-------------CCCccceeee-----------------------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPANKG-------------RLGWGTRVRI-----------------------------  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------------~~~~~~~~~i-----------------------------  137 (253)
                      ..+..+++|||+++|+|.+++.......             .+++.....+                             
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~  171 (304)
T cd05101          92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT  171 (304)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence            9999999999999999999885422110             0111100000                             


Q ss_pred             --------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchh
Q 043709          138 --------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLL  178 (253)
Q Consensus       138 --------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~  178 (253)
                                                            ......++.++||||||+++||+++ |..||.....  ..+.
T Consensus       172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~  249 (304)
T cd05101         172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELF  249 (304)
T ss_pred             CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHH
Confidence                                                  1112346778999999999999998 6677643321  1111


Q ss_pred             hhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          179 GYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                          .... ...         ....+...+..+.+++.+||..+|.+|||+.++++.|+++.
T Consensus       250 ----~~~~-~~~---------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~  297 (304)
T cd05101         250 ----KLLK-EGH---------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL  297 (304)
T ss_pred             ----HHHH-cCC---------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence                1111 110         11111234467888999999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.92  E-value=6.8e-26  Score=179.10  Aligned_cols=175  Identities=17%  Similarity=0.207  Sum_probs=128.5

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|++.+.||+|+||+|..    .+++.+|+|++++.   ...+.+....|..+|..++||+||+++..+++...+|+
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            346899999999999999433    67999999999875   34556788999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccce-eee------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTR-VRI------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~-~~i------------------------------------------------  137 (253)
                      |+||+.||+|...|.+...   ...... +-+                                                
T Consensus       103 Vld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~  179 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG  179 (357)
T ss_pred             EEeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence            9999999999999853221   111100 000                                                


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ++....|+..+|-||+|+++|||++|.+||.......  +..     ....+.         ..
T Consensus       180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~--~~~-----~I~~~k---------~~  243 (357)
T KOG0598|consen  180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKK--MYD-----KILKGK---------LP  243 (357)
T ss_pred             CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHH--HHH-----HHhcCc---------CC
Confidence                            3456679999999999999999999999987443321  111     111111         01


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCC
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRP  227 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RP  227 (253)
                      ..+.-......+++.+.+..||++|-
T Consensus       244 ~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  244 LPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             CCCccCCHHHHHHHHHHhccCHHHhc
Confidence            11111335677777889999999995

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.2e-25  Score=182.10  Aligned_cols=179  Identities=15%  Similarity=0.147  Sum_probs=127.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+.++++|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            3688999999999999554    46889999999643   2234456889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++.....   +.......+                                                   
T Consensus        81 e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~  157 (291)
T cd05612          81 EYVPGGELFSYLRNSGR---FSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWT  157 (291)
T ss_pred             eCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCccc
Confidence            99999999998743221   111110000                                                   


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++|||||||++|||++|..||.....  ..+...+    . .+.          ...+..
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--~~~~~~i----~-~~~----------~~~~~~  220 (291)
T cd05612         158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--FGIYEKI----L-AGK----------LEFPRH  220 (291)
T ss_pred             ccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-hCC----------cCCCcc
Confidence                       12233467889999999999999999999864322  1111111    0 010          011112


Q ss_pred             HHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      ....+.+++.+||..||.+||+     ++++++
T Consensus       221 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         221 LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            2456778899999999999995     888774

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.92  E-value=1.6e-24  Score=180.22  Aligned_cols=187  Identities=14%  Similarity=0.168  Sum_probs=125.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|+..+.||+|+||.+++    .+++.||||++... .....+.+.+|+.+++.++|+||+++++++...+.++++|||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            4566778999999999654    46889999999654 233456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCC--------------------------------------CcCCCCccceeee---------------
Q 043709          111 MPNKSLDYFLFDPA--------------------------------------NKGRLGWGTRVRI---------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~--------------------------------------~~~~~~~~~~~~i---------------  137 (253)
                      +.+|+|........                                      .....++.....+               
T Consensus       154 ~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  233 (353)
T PLN00034        154 MDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIA  233 (353)
T ss_pred             CCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCcc
Confidence            99999865431000                                      0000011000000               


Q ss_pred             -----ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 -----YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 -----~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                           .+     .....+.++|||||||++|||++|+.||.......  +.... .... ..         .........
T Consensus       234 y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~-~~~~-~~---------~~~~~~~~~  300 (353)
T PLN00034        234 YMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD--WASLM-CAIC-MS---------QPPEAPATA  300 (353)
T ss_pred             ccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHH-HHHh-cc---------CCCCCCCcc
Confidence                 00     01123458999999999999999999987322211  11111 0000 00         011112234


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ...+.+++.+||..||++||++.++++.
T Consensus       301 ~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        301 SREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            4578889999999999999999999963

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.92  E-value=3.7e-25  Score=176.12  Aligned_cols=177  Identities=25%  Similarity=0.327  Sum_probs=123.1

Q ss_pred             ccccccccceEe------eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           43 KLGEGGFGPGKL------LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        43 ~ig~G~fg~~~~------~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      .||+|+||.+++      .++..+|+|++....  ....+.+.+|+.+++.+.||||+++++++.. +..+++|||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            689999999654      357889999987542  3345678999999999999999999998854 5678999999999


Q ss_pred             ChhhhccCCCCcCCCCccceeee---------------------------------------------------------
Q 043709          115 SLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------------  137 (253)
Q Consensus       115 ~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------------  137 (253)
                      +|.+++.....   +++.....+                                                         
T Consensus        81 ~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05116          81 PLNKFLQKNKH---VTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH  157 (257)
T ss_pred             cHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence            99988743211   111100000                                                         


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                 ......++.++|+|||||++||+++ |..||.....  ..+...+     ..+.         ..+.+.
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i-----~~~~---------~~~~~~  221 (257)
T cd05116         158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMI-----ESGE---------RMECPQ  221 (257)
T ss_pred             CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH-----HCCC---------CCCCCC
Confidence                       0112345668999999999999998 8888764322  1111111     1111         111122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ..+..+.+++.+||+.||++||++++|...|++.
T Consensus       222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            3446778899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.92  E-value=8.4e-25  Score=176.72  Aligned_cols=184  Identities=17%  Similarity=0.188  Sum_probs=127.8

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .|+..+.||+|+||.+++    .+++.||+|.+....   ......+.+|+.+++.++|+||+++++.+...+..+++||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            377889999999999544    578999999987542   2233467899999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|..++...... .+++.....+                                                    
T Consensus        81 ~~~~g~L~~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  159 (285)
T cd05631          81 IMNGGDLKFHIYNMGNP-GFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVR  159 (285)
T ss_pred             ecCCCcHHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeec
Confidence            99999998776321110 1111111100                                                    


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|||||||++|||++|+.||........  .... ......          .......
T Consensus       160 ~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~--~~~~-~~~~~~----------~~~~~~~  226 (285)
T cd05631         160 GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK--REEV-DRRVKE----------DQEEYSE  226 (285)
T ss_pred             CCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh--HHHH-HHHhhc----------ccccCCc
Confidence                        22334578899999999999999999999875433211  0111 000000          0011122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      .....+.+++.+||+.||++||+     ++++++
T Consensus       227 ~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         227 KFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             cCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            33457788899999999999997     788885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.92  E-value=4.1e-25  Score=177.48  Aligned_cols=188  Identities=29%  Similarity=0.376  Sum_probs=131.0

Q ss_pred             hcCccccCccccccccceEee---------CCCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .++|++.+.||+|+||.+++.         ....+++|.+...... ..+.+.+|+.+++.++||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   83 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPH   83 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcc
Confidence            367899999999999996542         3467999988754333 457899999999999999999999999988899


Q ss_pred             EEEEeeCCCCChhhhccCCCCcC------CCCccceeee-----------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKG------RLGWGTRVRI-----------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~------~~~~~~~~~i-----------------------------------------  137 (253)
                      +++|||+++|+|.+++.......      .+.+.....+                                         
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~  163 (275)
T cd05046          84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSL  163 (275)
T ss_pred             eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccc
Confidence            99999999999999985432111      1122211111                                         


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                               ......++.++||||||+++|++++ |..||.....  .......     ..+..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--~~~~~~~-----~~~~~  236 (275)
T cd05046         164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--EEVLNRL-----QAGKL  236 (275)
T ss_pred             ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--HHHHHHH-----HcCCc
Confidence                                     0122335677999999999999999 5667642211  1111111     11111


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      .        .......+..+.+++.+||..+|++|||+.++++.|.
T Consensus       237 ~--------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         237 E--------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             C--------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            0        0111233457888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.92  E-value=1.1e-24  Score=177.92  Aligned_cols=194  Identities=17%  Similarity=0.221  Sum_probs=129.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|+||.+++    .++..+|+|.+... .......+.+|+.+++.++||||+++++++..++.++++|||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            3689999999999999554    46788999998754 333456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccce-------------------------------------eee----------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTR-------------------------------------VRI----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~-------------------------------------~~i----------------  137 (253)
                      +++|+|.+++.....   +.....                                     ..+                
T Consensus        81 ~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  157 (308)
T cd06615          81 MDGGSLDQVLKKAGR---IPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  157 (308)
T ss_pred             cCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccccccc
Confidence            999999998843211   000000                                     000                


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcc--------------
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLW--------------  192 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  192 (253)
                                 ...+..++.++|+||||+++|++++|..||........  .... ..........              
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  234 (308)
T cd06615         158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL--EAMF-GRPVSEGEAKESHRPVSGHPPDSP  234 (308)
T ss_pred             CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH--HHhh-cCccccccccCCcccccCCCCCcc
Confidence                       11223467789999999999999999999864432111  0000 0000000000              


Q ss_pred             ------c----cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          193 ------D----LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       193 ------~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                            +    .................+.+++.+||..+|++||++.+|++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             chhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                  0    000000000001134568899999999999999999999854

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.92  E-value=3.2e-25  Score=181.75  Aligned_cols=188  Identities=23%  Similarity=0.347  Sum_probs=130.6

Q ss_pred             cCccccCccccccccceEee----CCC----EEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKLL----NGE----QVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~----~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .+|+..+.||+|+||.+++.    +++    .||+|.+... .....+++.+|+.+++.++||||++++|++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            57999999999999996542    333    3899999754 334557799999999999999999999999864 5789


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +++|+++|+|.+++......  +.+.....+                                                 
T Consensus        86 v~e~~~~g~l~~~l~~~~~~--~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eeecCCCCCHHHHHHhcccc--CCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCC
Confidence            99999999999887532110  111110000                                                 


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++|||||||++||+++ |..||.......  +.     .....+..  ..   
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~~-----~~~~~~~~--~~---  231 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--IS-----SILEKGER--LP---  231 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HH-----HHHhCCCC--CC---
Confidence                              1223456778999999999999997 888875332111  11     11111110  00   


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                          ........+.+++.+||..+|++||++.+++..|..+.++
T Consensus       232 ----~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         232 ----QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             ----CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence                1112234677888999999999999999999999887744

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.92  E-value=3.9e-25  Score=176.54  Aligned_cols=188  Identities=27%  Similarity=0.354  Sum_probs=130.1

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..++|++.+.||+|+||.+++   .....||+|++.... ...+.+.+|+.+++.++||||+++++.+. .+..+++|||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY   81 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence            456799999999999999554   334579999997532 23467899999999999999999999874 4568999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++.+.... .+++.....+                                                     
T Consensus        82 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~  160 (262)
T cd05071          82 MSKGSLLDFLKGEMGK-YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR  160 (262)
T ss_pred             CCCCcHHHHHhhcccc-CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence            9999999988532110 1111111111                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++|||||||++||+++ |..||.....  .......    . ..         .....
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--~~~~~~~----~-~~---------~~~~~  224 (262)
T cd05071         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV----E-RG---------YRMPC  224 (262)
T ss_pred             cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--HHHHHHH----h-cC---------CCCCC
Confidence                         0112345678999999999999999 6666643221  1111111    0 00         00111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ....+..+.+++.+||+.+|++||++.++++.|++..
T Consensus       225 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         225 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            2234567889999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.92  E-value=4.1e-25  Score=176.11  Aligned_cols=186  Identities=28%  Similarity=0.392  Sum_probs=129.4

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..++|++.+.||+|+||.++.   ..+..+|+|.+.... ...+.+.+|+.+++.++||||+++++++. .+..+++|||
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~   81 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY   81 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence            446789999999999999553   456789999997543 23467899999999999999999999875 4568999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.+++..... ..+.+.....+                                                     
T Consensus        82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05070          82 MSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             cCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence            999999998853211 11111111110                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++|+||||+++||+++ |..||....  ........     ...         .....
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~-----~~~---------~~~~~  224 (260)
T cd05070         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NREVLEQV-----ERG---------YRMPC  224 (260)
T ss_pred             cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHH-----HcC---------CCCCC
Confidence                         0112335668999999999999999 777775322  11111111     011         01111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      +...+..+.+++.+||..+|++|||+.++.+.|++
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         225 PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            22334578889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.91  E-value=1.3e-24  Score=174.79  Aligned_cols=180  Identities=16%  Similarity=0.233  Sum_probs=130.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..|+..+.||.|+||.++.    .++..||+|.+... .....+.+.+|+.+++.+.||||+++++.+.+.+..++||||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence            4688889999999999544    45788999998754 344567799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++....    +.......+                                                     
T Consensus        84 ~~~~~L~~~i~~~~----l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06640          84 LGGGSALDLLRAGP----FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             CCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence            99999998874321    000000000                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+|||||++|||++|..||........  .    .          ............
T Consensus       160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~----~----------~~~~~~~~~~~~  223 (277)
T cd06640         160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--L----F----------LIPKNNPPTLTG  223 (277)
T ss_pred             cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--h----h----------hhhcCCCCCCch
Confidence                        11233467789999999999999999999764322110  0    0          001111122233


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ..+..+.+++.+||+.+|++||++.+++..
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            456778899999999999999999999753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=6.4e-25  Score=181.62  Aligned_cols=184  Identities=20%  Similarity=0.274  Sum_probs=130.2

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc----cc-ccHHHHHHHHHHHHhcc-CCCcceEeEEEEecC
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ----SG-QGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKG  102 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~  102 (253)
                      ...+.|.+++.||+|+||++.+    .++..||+|++...    .. ...+...+|+.+++.++ ||||++++.++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4557899999999999999554    57899999977653    12 23456678999999998 999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCC---------------------------------CCcc-ceeee-----------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGR---------------------------------LGWG-TRVRI-----------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~---------------------------------~~~~-~~~~i-----------  137 (253)
                      .+++|||||.+|+|.+++.+......                                 ++-. ..+.+           
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~  173 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG  173 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence            99999999999999999844111100                                 0000 00001           


Q ss_pred             ------------------eeecCc-c-ccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 ------------------YALHGV-F-SIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 ------------------~~~~~~-~-~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                        ++.... | +.++||||+|++||.|++|..||.....  ..+...+             ...
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~--~~l~~ki-------------~~~  238 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV--PNLYRKI-------------RKG  238 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--HHHHHHH-------------hcC
Confidence                              223333 5 4789999999999999999999985221  1111110             001


Q ss_pred             cCCCCCCHHH-HHHHHHHhccccCCCCCCCCCHHHHH
Q 043709          198 MLQTEASYPI-LKRYSNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       198 ~~~~~~~~~~-~~~~~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      .+  ..+.-. +..+..|+.+|+..||..|+++.+|+
T Consensus       239 ~~--~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  239 EF--KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             Cc--cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            01  011111 56788899999999999999999999

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.91  E-value=5.8e-25  Score=181.80  Aligned_cols=197  Identities=15%  Similarity=0.158  Sum_probs=134.4

Q ss_pred             hcCccccCccccccccceEee----C-CCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL----N-GEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~----~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|++.+.||+|+||.+++.    + +..||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+.+++
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l  108 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL  108 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence            357999999999999996542    2 357999999643   23445678899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+.+|+|.+++.....   +.......+                                                 
T Consensus       109 v~Ey~~~g~L~~~i~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~  185 (340)
T PTZ00426        109 VLEFVIGGEFFTFLRRNKR---FPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT  185 (340)
T ss_pred             EEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc
Confidence            9999999999998843221   111110000                                                 


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|||||||++|||++|..||......  .....+     ..+.. .         .+
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~~~i-----~~~~~-~---------~p  248 (340)
T PTZ00426        186 YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LIYQKI-----LEGII-Y---------FP  248 (340)
T ss_pred             ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HHHHHH-----hcCCC-C---------CC
Confidence                         112234678899999999999999999998643221  111111     11110 0         11


Q ss_pred             HHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH--Hhhc------ccCCCCCCCCCC
Q 043709          205 YPILKRYSNVDLFCFRENATDRP-----TMLEIVSM--LSNE------IVNLPYPQQSAF  251 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~~--L~~~------~~~~~~~~~~~~  251 (253)
                      ......+.+++.+||+.+|++|+     +++++++.  +..+      ...+..|..|.+
T Consensus       249 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~~  308 (340)
T PTZ00426        249 KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPKY  308 (340)
T ss_pred             CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCC
Confidence            12234567888889999999995     89988753  2221      234456666654

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.91  E-value=4.8e-25  Score=175.12  Aligned_cols=181  Identities=22%  Similarity=0.286  Sum_probs=129.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|++|.+++    .+++.|++|.+...  .....+.+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            578889999999999544    46889999998643  344567799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.++++.... ..+.+.....+                                                     
T Consensus        81 ~~~~~L~~~l~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~  159 (256)
T cd08529          81 AENGDLHKLLKMQRG-RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN  159 (256)
T ss_pred             CCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence            999999998854211 11111111100                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+|||||++|+|++|..||.....  .......     ..+..         .....
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~-----~~~~~---------~~~~~  223 (256)
T cd08529         160 TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALILKI-----IRGVF---------PPVSQ  223 (256)
T ss_pred             ccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH-----HcCCC---------CCCcc
Confidence                        11223456789999999999999999999864431  1111111     01110         11111


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+.+++.+||+.+|++||++.+++.
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         224 MYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             ccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            34457888999999999999999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.91  E-value=5.6e-25  Score=180.82  Aligned_cols=173  Identities=14%  Similarity=0.122  Sum_probs=123.2

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      +.||+|+||.+++    .+++.||+|++...   .......+.+|+.+++.++||||+++++.+...+.+++||||+.+|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999654    56889999999754   2344567889999999999999999999999999999999999999


Q ss_pred             ChhhhccCCCCcCCCCccceee------------------------------------e---------------------
Q 043709          115 SLDYFLFDPANKGRLGWGTRVR------------------------------------I---------------------  137 (253)
Q Consensus       115 ~L~~~l~~~~~~~~~~~~~~~~------------------------------------i---------------------  137 (253)
                      +|.+++.....   +.+.....                                    +                     
T Consensus        81 ~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  157 (323)
T cd05571          81 ELFFHLSRERV---FSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             cHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence            99887732110   11100000                                    0                     


Q ss_pred             --------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHH
Q 043709          138 --------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILK  209 (253)
Q Consensus       138 --------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (253)
                              ......++.++||||+||++|||++|..||......  ......    . ...          ...+.....
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~----~-~~~----------~~~p~~~~~  220 (323)
T cd05571         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELI----L-MEE----------IRFPRTLSP  220 (323)
T ss_pred             CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHH----H-cCC----------CCCCCCCCH
Confidence                    223345788999999999999999999998643221  111111    0 010          011123345


Q ss_pred             HHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          210 RYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       210 ~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      .+.+++.+||..||++||     ++.++++
T Consensus       221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            678889999999999999     7888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.91  E-value=4.9e-25  Score=175.30  Aligned_cols=182  Identities=26%  Similarity=0.382  Sum_probs=128.4

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .+|++.+.||+|+||.+++   ..+..+|+|.+.... .....+.+|+.+++.++||||+++++++...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            4688899999999999554   345689999986432 234578899999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +++|.+++.....  ...+.....+                                                       
T Consensus        83 ~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (256)
T cd05059          83 NGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG  160 (256)
T ss_pred             CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence            9999998843211  1111111110                                                       


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                 ......++.++||||||+++||+++ |..||.....  .......    .. .         .....+.
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~----~~-~---------~~~~~~~  224 (256)
T cd05059         161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEVVESV----SA-G---------YRLYRPK  224 (256)
T ss_pred             CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHHHHHH----Hc-C---------CcCCCCC
Confidence                       1112446678999999999999999 6777753322  1111111    00 0         0111112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSML  236 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L  236 (253)
                      ..+..+.+++.+||..+|++|||+.++++.|
T Consensus       225 ~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         225 LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            2455788899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.91  E-value=4.5e-25  Score=182.23  Aligned_cols=196  Identities=22%  Similarity=0.348  Sum_probs=135.1

Q ss_pred             HHHHhcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGC   97 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~   97 (253)
                      +.....+|++.+.||+|+||.++..           ....||+|.+... .....+.+.+|+.+++++ .||||++++++
T Consensus         7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~   86 (334)
T cd05100           7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA   86 (334)
T ss_pred             cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence            3334457899999999999995542           1236899988754 334457899999999999 79999999999


Q ss_pred             EEecCeeEEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee---------------------------
Q 043709           98 CVEKGVKILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI---------------------------  137 (253)
Q Consensus        98 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i---------------------------  137 (253)
                      +...+..++++||+++|+|.+++......             ..+.+.....+                           
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil  166 (334)
T cd05100          87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL  166 (334)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEE
Confidence            99999999999999999999988542210             01111110000                           


Q ss_pred             ----------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcc
Q 043709          138 ----------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLT  176 (253)
Q Consensus       138 ----------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~  176 (253)
                                                              ......++.++||||||+++|||++ |..||.....  ..
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~  244 (334)
T cd05100         167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--EE  244 (334)
T ss_pred             EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH--HH
Confidence                                                    0112346678999999999999998 6777653321  11


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      +.    ... ....         ........+..+.+++.+||+.+|++||++.++++.|+.+...
T Consensus       245 ~~----~~~-~~~~---------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         245 LF----KLL-KEGH---------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             HH----HHH-HcCC---------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence            11    111 1110         1111123345678899999999999999999999999988843

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.91  E-value=1.1e-24  Score=179.31  Aligned_cols=82  Identities=16%  Similarity=0.231  Sum_probs=68.2

Q ss_pred             ccCccccc--cccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           40 MENKLGEG--GFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        40 ~~~~ig~G--~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      +++.||+|  +|+++++    .+++.||+|.+...  .....+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            56789999  4566433    67899999999754  2333456778999999999999999999999999999999999


Q ss_pred             CCCChhhhcc
Q 043709          112 PNKSLDYFLF  121 (253)
Q Consensus       112 ~~g~L~~~l~  121 (253)
                      ++|+|.+++.
T Consensus        82 ~~~~l~~~~~   91 (327)
T cd08227          82 AYGSAKDLIC   91 (327)
T ss_pred             CCCcHHHHHH
Confidence            9999998874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=6.3e-25  Score=177.31  Aligned_cols=187  Identities=18%  Similarity=0.239  Sum_probs=131.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|+||.+++    .++..||+|++... .....+.+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            5788889999999999554    45889999988754 234457789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccce-------------------------------------eee----------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTR-------------------------------------VRI----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~-------------------------------------~~i----------------  137 (253)
                      +++|+|..++.....   +.+...                                     ..+                
T Consensus        85 ~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~  161 (284)
T cd06620          85 MDCGSLDRIYKKGGP---IPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT  161 (284)
T ss_pred             CCCCCHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence            999999887643110   000000                                     000                


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc------chhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL------TLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                 ......++.++|+|||||++|++++|..||........      .+.... ....         .....
T Consensus       162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~---------~~~~~  231 (284)
T cd06620         162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLL-QQIV---------QEPPP  231 (284)
T ss_pred             cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHH-HHHh---------hccCC
Confidence                       12234567789999999999999999999875443211      011111 0000         00000


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      .......+..+.+++.+||..||++||++.++++.
T Consensus       232 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         232 RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             CCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            01111244567889999999999999999999975

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.91  E-value=1.2e-24  Score=176.67  Aligned_cols=183  Identities=15%  Similarity=0.236  Sum_probs=131.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ...+|++.+.||+|+||.+++    .++..||+|.+........+.+.+|+.+++.++||||+++++.+......++|||
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            446899999999999999544    4688999999987655556789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|.+++.+..    ..+.....+                                                    
T Consensus        98 ~~~~~~L~~~~~~~~----~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  173 (296)
T cd06654          98 YLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  173 (296)
T ss_pred             ccCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccccc
Confidence            999999998874311    000000000                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|||||||++|+|++|..||........ +.    . ... ....       .....
T Consensus       174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~----~-~~~-~~~~-------~~~~~  239 (296)
T cd06654         174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LY----L-IAT-NGTP-------ELQNP  239 (296)
T ss_pred             CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HH----H-Hhc-CCCC-------CCCCc
Confidence                         11223466789999999999999999999864332111 00    0 000 0000       00112


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+.+++.+||..+|++||++.++++
T Consensus       240 ~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             cccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            234456788999999999999999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.91  E-value=9.1e-25  Score=176.77  Aligned_cols=194  Identities=14%  Similarity=0.141  Sum_probs=128.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|+||.+++    .++..||+|.++... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            5699999999999999654    468899999997542 33445788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +.+ +|.+++......  +.......+                                                     
T Consensus        85 ~~~-~l~~~l~~~~~~--~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~  161 (288)
T cd07871          85 LDS-DLKQYLDNCGNL--MSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYS  161 (288)
T ss_pred             CCc-CHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcccc
Confidence            984 888776321110  000000000                                                     


Q ss_pred             ------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cC---------CCccc
Q 043709          138 ------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--ND---------GSLWD  193 (253)
Q Consensus       138 ------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~---------~~~~~  193 (253)
                                  .. ....++.++||||+||++|||++|..||.......  ..........  ..         .....
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd07871         162 NEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE--ELHLIFRLLGTPTEETWPGITSNEEFRS  239 (288)
T ss_pred             CceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCChHHhhccccchhhhc
Confidence                        11 12347788999999999999999999986543221  1111100000  00         00011


Q ss_pred             cccccCCCCC----CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          194 LMDPMLQTEA----SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       194 ~~~~~~~~~~----~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+......    .......+.+++.+||..||.+|||++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            1111111000    1123456788999999999999999999985

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1e-24  Score=175.70  Aligned_cols=185  Identities=20%  Similarity=0.295  Sum_probs=130.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +.++|++.+.||.|+||.++.    .++..+|+|.+........+.+.+|+.+++.++||||+++++.+...+..+++||
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            456799999999999999544    4578999999986655666789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|.+++......  +.......+                                                    
T Consensus        83 ~~~~~~L~~~~~~~~~~--l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (280)
T cd06611          83 FCDGGALDSIMLELERG--LTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR  160 (280)
T ss_pred             ccCCCcHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence            99999999887432110  111110000                                                    


Q ss_pred             -------------e-----eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 -------------Y-----ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 -------------~-----~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                   .     .....++.++|+||||+++|||++|+.||......  .....+     .....     +..
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~~~~~-----~~~~~-----~~~  228 (280)
T cd06611         161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RVLLKI-----LKSEP-----PTL  228 (280)
T ss_pred             ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HHHHHH-----hcCCC-----CCc
Confidence                         0     01123566899999999999999999998643221  111111     01100     010


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        ..+......+.+++.+||..+|++||++.++++
T Consensus       229 --~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         229 --DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             --CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence              111223456778888999999999999999985

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.91  E-value=7.5e-25  Score=174.06  Aligned_cols=182  Identities=21%  Similarity=0.246  Sum_probs=127.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      +|++.+.||+|+||.+++    .++..+|+|.++.. .....+.+.+|+.+++.++||||+++++.+..++.++++|||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            478889999999998443    56889999998643 3445677889999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      ++|+|.+++...... .+.......+                                                      
T Consensus        81 ~~~~l~~~~~~~~~~-~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (255)
T cd08219          81 DGGDLMQKIKLQRGK-LFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT  159 (255)
T ss_pred             CCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence            999998877431110 0111100000                                                      


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++|+||||+++|+|++|..||......  ...    .... .+....         .+..
T Consensus       160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~----~~~~-~~~~~~---------~~~~  223 (255)
T cd08219         160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK--NLI----LKVC-QGSYKP---------LPSH  223 (255)
T ss_pred             ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH--HHH----HHHh-cCCCCC---------CCcc
Confidence                       111233667899999999999999999998643211  111    1111 111111         1112


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ....+.+++.+||+.||++||++.+|+..
T Consensus       224 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         224 YSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            33467788899999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.91  E-value=6.8e-25  Score=176.26  Aligned_cols=175  Identities=19%  Similarity=0.233  Sum_probs=119.5

Q ss_pred             ccccccccceEeeC----------------------------CCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceE
Q 043709           43 KLGEGGFGPGKLLN----------------------------GEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRI   94 (253)
Q Consensus        43 ~ig~G~fg~~~~~~----------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~   94 (253)
                      +||+|+||.++...                            ...||+|.+..........+.+|+.+++.++||||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            68999999955421                            13588998876544445678899999999999999999


Q ss_pred             eEEEEecCeeEEEEeeCCCCChhhhccCCCCcCCCCcccee---------------------------------------
Q 043709           95 IGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRV---------------------------------------  135 (253)
Q Consensus        95 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~---------------------------------------  135 (253)
                      ++++...+..++||||+++|+|..++......  +++....                                       
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGR--VPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCc
Confidence            99999999999999999999998887432111  0000000                                       


Q ss_pred             ----ee-------------------------eee-cCccccccceeehhHHHHHHH-hCCCCcCcCCCCCcchhhhhhHh
Q 043709          136 ----RI-------------------------YAL-HGVFSIKSDVFSFGVLLLETL-SSKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       136 ----~i-------------------------~~~-~~~~~~~~DiwSlG~~l~ell-~~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                          .+                         ... ...++.++|||||||++||++ +|..||.......  ..... ..
T Consensus       160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~-~~  236 (274)
T cd05076         160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KERFY-EK  236 (274)
T ss_pred             cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHHHH-Hh
Confidence                00                         011 134678899999999999995 6777775432211  11110 00


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                         ..        .    .+.+....+.+++.+||+.+|++|||+.+|++.|.
T Consensus       237 ---~~--------~----~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         237 ---KH--------R----LPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ---cc--------C----CCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence               00        0    00112245788899999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.91  E-value=1.4e-24  Score=172.53  Aligned_cols=182  Identities=17%  Similarity=0.208  Sum_probs=129.0

Q ss_pred             CccccCccccccccceE----eeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGK----LLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~----~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|+..+.||.|+||.++    ..+++.+++|.+...  +......+.+|+.++++++|+||+++++++.+.+.++++|||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            48889999999999732    356889999998754  345556789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++.... ...++......+                                                     
T Consensus        81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  159 (256)
T cd08221          81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE  159 (256)
T ss_pred             cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence            99999999885431 111111111100                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ...+..++.++|+||||+++|||++|..||.....  .......    . .+....         ...
T Consensus       160 ~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--~~~~~~~----~-~~~~~~---------~~~  223 (256)
T cd08221         160 TVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--LNLVVKI----V-QGNYTP---------VVS  223 (256)
T ss_pred             ccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----H-cCCCCC---------Ccc
Confidence                        01112356789999999999999999999864322  1111111    1 111110         112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      .....+.+++.+||..+|++||++.++++.
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         224 VYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             ccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            334567888889999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=6.4e-25  Score=175.00  Aligned_cols=188  Identities=28%  Similarity=0.385  Sum_probs=133.2

Q ss_pred             HHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           33 AATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ...++|++.+.||+|+||.++.   ..+..+|||.+.... ...+.+.+|+.+++.++||||+++++++......+++||
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE   81 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence            3457899999999999999554   455779999987532 345679999999999999999999999998889999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++++|.+++..... ..+.+.....+                                                    
T Consensus        82 ~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (261)
T cd05034          82 YMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA  160 (261)
T ss_pred             ccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence            9999999998854221 11111111111                                                    


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                    ......++.++|+||||+++|++++ |..||.....  .......    . ..         ....
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~----~-~~---------~~~~  224 (261)
T cd05034         161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--REVLEQV----E-RG---------YRMP  224 (261)
T ss_pred             hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----H-cC---------CCCC
Confidence                          0112346678999999999999998 8888753221  1111111    0 00         0011


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      .+...+..+.+++.+||+.+|++||+++++.+.|+.
T Consensus       225 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         225 RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            111224568889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.91  E-value=8.5e-25  Score=176.14  Aligned_cols=188  Identities=23%  Similarity=0.326  Sum_probs=127.5

Q ss_pred             cCccccCccccccccceEe----eCCC----EEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGE----QVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ++|++.+.||+|+||.+++    .+++    .+++|.+.... .....++..|+.+++.+.||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence            4678889999999999654    2344    47788876432 2334678888889999999999999998764 56789


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ++||+++|+|.+++.....  .+++.....+                                                 
T Consensus        86 i~e~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHRD--SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEEeCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence            9999999999999843211  1111111111                                                 


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ....+.++.++|||||||++||+++ |..||......  ...     .....+..  ...+.
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~-----~~~~~~~~--~~~~~  234 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVP-----DLLEKGER--LAQPQ  234 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHH-----HHHHCCCc--CCCCC
Confidence                              1123457788999999999999998 88887543221  111     11111111  11111


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                             .....+..++.+||..+|++|||+.++++.|..+.++
T Consensus       235 -------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         235 -------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             -------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence                   1224567788889999999999999999999998753

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.91  E-value=3.8e-25  Score=176.14  Aligned_cols=177  Identities=22%  Similarity=0.275  Sum_probs=120.8

Q ss_pred             CccccccccceEee-----------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           42 NKLGEGGFGPGKLL-----------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        42 ~~ig~G~fg~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +.||+|+||.+++.           ....+|+|.+........+.+..|+.+++.++||||+++++++..++..++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            46899999996542           1234888888655545567789999999999999999999999998999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +.+|+|.++++.....  +.+.....+                                                     
T Consensus        81 ~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~  158 (258)
T cd05078          81 VKFGSLDTYLKKNKNL--INISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV  158 (258)
T ss_pred             CCCCcHHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence            9999999998542211  111111000                                                     


Q ss_pred             ----------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 ----------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 ----------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                      ... ...++.++||||||+++||+++|..++........ ..     .....           .
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~-~~-----~~~~~-----------~  221 (258)
T cd05078         159 LPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK-KL-----QFYED-----------R  221 (258)
T ss_pred             CCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH-HH-----HHHHc-----------c
Confidence                            011 12367789999999999999999644332211110 00     00000           0


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ...+......+.+++.+||+.+|++|||+++|++.|+
T Consensus       222 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         222 HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            0111122356788999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.91  E-value=1.4e-24  Score=173.83  Aligned_cols=187  Identities=19%  Similarity=0.259  Sum_probs=129.2

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++++.....||+|+||.+++    .++..||+|.+........+.+.+|+.+++.++|+||+++++++...+..++++|
T Consensus         6 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   85 (268)
T cd06624           6 EYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFME   85 (268)
T ss_pred             ccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEe
Confidence            445566667899999999554    4577899999986655666789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccc-------------------------------------eeee---------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGT-------------------------------------RVRI---------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~-------------------------------------~~~i---------------  137 (253)
                      |+++++|.++++............                                     ...+               
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~  165 (268)
T cd06624          86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPC  165 (268)
T ss_pred             cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCc
Confidence            999999999885421100000000                                     0000               


Q ss_pred             --------------eee--cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 --------------YAL--HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 --------------~~~--~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                    ...  ...++.++|+||||+++|++++|..||...........     ..   .      ......
T Consensus       166 ~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~-----~~---~------~~~~~~  231 (268)
T cd06624         166 TETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMF-----KV---G------MFKIHP  231 (268)
T ss_pred             cccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHh-----hh---h------hhccCC
Confidence                          000  11266789999999999999999999753322111000     00   0      000011


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+......+.+++.+||+.+|.+|||+.+++.
T Consensus       232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            112234456788899999999999999999886

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.91  E-value=1.6e-24  Score=175.67  Aligned_cols=185  Identities=17%  Similarity=0.291  Sum_probs=130.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +.+.|++.+.||.|+||.+++    .++..+++|.+........+.+.+|+.+++.++||||+++++.+..++..+++||
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            446799999999999999554    4578999999987666667789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceee------------------------------------e----------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I----------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i----------------  137 (253)
                      |+++++|..++.+....  +.+.....                                    +                
T Consensus        90 ~~~~~~l~~~~~~~~~~--l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~  167 (292)
T cd06644          90 FCPGGAVDAIMLELDRG--LTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR  167 (292)
T ss_pred             cCCCCcHHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccccc
Confidence            99999998765321100  00000000                                    0                


Q ss_pred             -------------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 -------------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 -------------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                   ..     ....++.++|+|||||++|||++|..||.......  ..    ... ........     
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~----~~~-~~~~~~~~-----  235 (292)
T cd06644         168 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VL----LKI-AKSEPPTL-----  235 (292)
T ss_pred             ceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH--HH----HHH-hcCCCccC-----
Confidence                         01     12335678999999999999999999975432210  00    000 01100000     


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        .........+.+++.+||..+|++||+++++++
T Consensus       236 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         236 --SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             --CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence              111233456788899999999999999999985

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.91  E-value=9.6e-25  Score=174.00  Aligned_cols=189  Identities=25%  Similarity=0.358  Sum_probs=132.4

Q ss_pred             HHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ....++|++.+.||+|+||.+++   ..+..+|+|.+... ....+.+.+|+.+++.++|+||+++++.+.. ...+++|
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~   79 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT   79 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence            34567899999999999999654   34567999988753 2345678999999999999999999999887 7789999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++..... ...++.....+                                                   
T Consensus        80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          80 EFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             EeCCCCcHHHHHHhCCc-cccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence            99999999998854211 11122111111                                                   


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                     ......++.++|+|||||++|++++ |..||.....  .......     ..+         ...
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~-----~~~---------~~~  222 (260)
T cd05073         159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRAL-----ERG---------YRM  222 (260)
T ss_pred             cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH-----hCC---------CCC
Confidence                           1112335668999999999999999 7877753321  1111111     011         001


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ......+..+.+++.+||+.+|++||++.++.+.|+.+
T Consensus       223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~  260 (260)
T cd05073         223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  260 (260)
T ss_pred             CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence            11123345688889999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.91  E-value=1.1e-24  Score=173.52  Aligned_cols=178  Identities=22%  Similarity=0.344  Sum_probs=122.8

Q ss_pred             ccccccccceEe------eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCC
Q 043709           43 KLGEGGFGPGKL------LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKS  115 (253)
Q Consensus        43 ~ig~G~fg~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~  115 (253)
                      .||+|+||.++.      ..+..||+|.+.... ....+.+.+|+.+++.++||||+++++++.. +..+++|||+++|+
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence            489999999654      234569999997553 3345679999999999999999999998754 57899999999999


Q ss_pred             hhhhccCCCCcCCCCccceeee----------------------------------------------------------
Q 043709          116 LDYFLFDPANKGRLGWGTRVRI----------------------------------------------------------  137 (253)
Q Consensus       116 L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------------  137 (253)
                      |.+++.....  .+++.....+                                                          
T Consensus        81 L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          81 LNKFLSGKKD--EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             HHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence            9998843211  1111111100                                                          


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                ......++.++|||||||++||+++ |..||......  .+...     ...+.         ....+..
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~-----~~~~~---------~~~~~~~  222 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSF-----IEQGK---------RLDCPAE  222 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHH-----HHCCC---------CCCCCCC
Confidence                      0112345678999999999999996 88887543221  11111     11111         1111223


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      .+..+.+++.+||..+|++||++.+|.+.|+.+
T Consensus       223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            346777899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.91  E-value=1.5e-23  Score=168.82  Aligned_cols=189  Identities=17%  Similarity=0.222  Sum_probs=127.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|.+... .....+.+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            3688889999999999554    57889999998754 334456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCC---------------------------C-----------cCCCC--------------------cc
Q 043709          111 MPNKSLDYFLFDPA---------------------------N-----------KGRLG--------------------WG  132 (253)
Q Consensus       111 ~~~g~L~~~l~~~~---------------------------~-----------~~~~~--------------------~~  132 (253)
                      +++|+|..+..-..                           +           ....+                    +.
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~  160 (279)
T cd06619          81 MDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYM  160 (279)
T ss_pred             CCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhhc
Confidence            99999865431000                           0           00000                    00


Q ss_pred             ceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHH
Q 043709          133 TRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYS  212 (253)
Q Consensus       133 ~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (253)
                      .+.  ......++.++|+|||||++|+|++|+.||.............-..........     +..   ........+.
T Consensus       161 aPE--~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~  230 (279)
T cd06619         161 APE--RISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP-----PVL---PVGQFSEKFV  230 (279)
T ss_pred             Cce--eecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC-----CCC---CCCcCCHHHH
Confidence            000  233445788999999999999999999998654322111110000000000000     000   1112334678


Q ss_pred             HHhccccCCCCCCCCCHHHHHH
Q 043709          213 NVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       213 ~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +++.+||+.+|++||+++++++
T Consensus       231 ~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         231 HFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             HHHHHHhhCChhhCCCHHHHhc
Confidence            8899999999999999999885

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.4e-24  Score=173.08  Aligned_cols=182  Identities=22%  Similarity=0.294  Sum_probs=127.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-----cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-----GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ++|++.+.||+|++|.++.    .++..+|+|.+....     ....+.+.+|+.+++.++||||+++++++...+.+++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            5799999999999999544    468899999986432     1224568899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee-------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI-------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i-------------  137 (253)
                      ++||+++++|.+++.....   ++.....                                    .+             
T Consensus        82 v~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~  158 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGA---LTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC  158 (263)
T ss_pred             EEEECCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence            9999999999887732110   0000000                                    00             


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         ......++.++||||+|+++||+++|+.||......     ... .......         
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~-~~~~~~~---------  223 (263)
T cd06625         159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-----AAI-FKIATQP---------  223 (263)
T ss_pred             cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-----HHH-HHHhccC---------
Confidence                               122233667899999999999999999997543211     000 0000000         


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ............+.+++.+||..+|.+||++.++++.
T Consensus       224 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         224 TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            1111122344567788889999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.91  E-value=1.2e-24  Score=176.84  Aligned_cols=189  Identities=15%  Similarity=0.229  Sum_probs=134.0

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ..++|++.+.||.|++|.++.    .+++.||+|.+........+.+.+|+.+++.++||||+++++.+...+.+++++|
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            335699999999999999553    5788999999976555556788999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|..++....    +.+.....+                                                    
T Consensus        97 ~~~~~~L~~~~~~~~----l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~  172 (296)
T cd06655          97 YLAGGSLTDVVTETC----MDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR  172 (296)
T ss_pred             ecCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccC
Confidence            999999988773311    111100000                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|||||||++|++++|..||........ . .    ... ......       ....
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~-~----~~~-~~~~~~-------~~~~  238 (296)
T cd06655         173 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L-Y----LIA-TNGTPE-------LQNP  238 (296)
T ss_pred             CCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H-H----HHH-hcCCcc-------cCCc
Confidence                         12233467889999999999999999999864432111 0 0    000 000000       0111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                      ......+.+++.+||..+|.+||++.+|+  .+++...
T Consensus       239 ~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         239 EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             ccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence            22345677888999999999999999998  4455433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.7e-25  Score=178.58  Aligned_cols=171  Identities=16%  Similarity=0.108  Sum_probs=119.7

Q ss_pred             cccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      ||+|+||.+++    .+++.||+|++...   .......+.+|+.+++.++||||+++++.+...+..+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            69999999654    46788999999753   334456788999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCcCCCCccceeee-----------------------------------------------------------
Q 043709          117 DYFLFDPANKGRLGWGTRVRI-----------------------------------------------------------  137 (253)
Q Consensus       117 ~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------------  137 (253)
                      .+++.....   +.+.....+                                                           
T Consensus        81 ~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  157 (312)
T cd05585          81 FHHLQREGR---FDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP  157 (312)
T ss_pred             HHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence            888743211   111110000                                                           


Q ss_pred             ------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHH
Q 043709          138 ------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRY  211 (253)
Q Consensus       138 ------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (253)
                            ......++.++|||||||++|||++|..||......  ...    ..... ..          ...+......+
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--~~~----~~~~~-~~----------~~~~~~~~~~~  220 (312)
T cd05585         158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN--EMY----RKILQ-EP----------LRFPDGFDRDA  220 (312)
T ss_pred             ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH--HHH----HHHHc-CC----------CCCCCcCCHHH
Confidence                  122334778899999999999999999998643221  111    11110 00          01112234567


Q ss_pred             HHHhccccCCCCCCCCC---HHHHHH
Q 043709          212 SNVDLFCFRENATDRPT---MLEIVS  234 (253)
Q Consensus       212 ~~l~~~cl~~~p~~RPs---~~~il~  234 (253)
                      .+++.+||..||.+||+   +.++++
T Consensus       221 ~~li~~~L~~dp~~R~~~~~~~e~l~  246 (312)
T cd05585         221 KDLLIGLLSRDPTRRLGYNGAQEIKN  246 (312)
T ss_pred             HHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence            88899999999999985   555553

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.91  E-value=2.5e-24  Score=192.71  Aligned_cols=195  Identities=17%  Similarity=0.236  Sum_probs=134.6

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++....   ....+++.+|+.+++.++||||+++++++.+.+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            5799999999999999655    468899999997542   233567999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCC--------CCccceeee-------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGR--------LGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~--------~~~~~~~~i-------------------------------------------  137 (253)
                      ||+++|+|.+++........        ..+.....+                                           
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence            99999999887742110000        000000000                                           


Q ss_pred             ----------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcch
Q 043709          138 ----------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL  177 (253)
Q Consensus       138 ----------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~  177 (253)
                                                              ...+..++.++|||||||++|||++|..||..........
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~  241 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKISY  241 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhh
Confidence                                                    1112346778999999999999999999986422111000


Q ss_pred             hhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHhhcccCCC
Q 043709          178 LGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRP-TMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-s~~~il~~L~~~~~~~~  244 (253)
                           .     .   ....+. ........+..+.+++.+||+.||++|| +++++++.|+......+
T Consensus       242 -----~-----~---~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p  295 (932)
T PRK13184        242 -----R-----D---VILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSP  295 (932)
T ss_pred             -----h-----h---hccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCc
Confidence                 0     0   000000 0011123445677889999999999996 57778888888876544

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.91  E-value=1.3e-24  Score=172.64  Aligned_cols=182  Identities=16%  Similarity=0.243  Sum_probs=128.8

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.++.    .++..+++|.+.....  .+.+.+|+.+++.++||||+++++.+......++++||
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~   79 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY   79 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence            36799999999999998443    3478899999975432  67899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.+++.....  .+.+.....+                                                     
T Consensus        80 ~~~~~L~~~l~~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~  157 (256)
T cd06612          80 CGAGSVSDIMKITNK--TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRN  157 (256)
T ss_pred             CCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccc
Confidence            999999988742111  1111110000                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ...+..++.++||||||+++|+|++|..||..........      ..  ..    ...+.  .....
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~------~~--~~----~~~~~--~~~~~  223 (256)
T cd06612         158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF------MI--PN----KPPPT--LSDPE  223 (256)
T ss_pred             cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh------hh--cc----CCCCC--CCchh
Confidence                        1122346678999999999999999999986432211100      00  00    00000  11122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+.+++.+||+.+|++|||+.++++
T Consensus       224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            33456888999999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.91  E-value=1.5e-24  Score=173.79  Aligned_cols=183  Identities=25%  Similarity=0.386  Sum_probs=126.0

Q ss_pred             CccccccccceEe----eCCC--EEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGE--QVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .++.  .+|+|.+... .....+.+.+|+.++.++ +||||+++++++...+..+++|||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            4689999999554    2333  5788888743 344556789999999999 799999999999999999999999999


Q ss_pred             CChhhhccCCCCc-------------CCCCccceeee-------------------------------------------
Q 043709          114 KSLDYFLFDPANK-------------GRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~-------------~~~~~~~~~~i-------------------------------------------  137 (253)
                      |+|.+++......             ..+.+.....+                                           
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            9999988542210             00111111110                                           


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                           ......++.++|||||||++|||++ |..||......  .....     ...+      
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~-----~~~~------  227 (270)
T cd05047         161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEK-----LPQG------  227 (270)
T ss_pred             ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH--HHHHH-----HhCC------
Confidence                                 1112346678999999999999997 88887533211  11111     1011      


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                         ...+........+.+++.+||..+|.+|||+.+++..|++++
T Consensus       228 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         228 ---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             ---CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence               111111223456788999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.9e-24  Score=173.58  Aligned_cols=180  Identities=17%  Similarity=0.264  Sum_probs=128.6

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||.|++|.+++    .+++.||+|.+... .......+.+|+.+++.++||||+++++.+..+..+++++||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            3688889999999999544    46889999999754 244556788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.+++....    +.+.....+                                                     
T Consensus        81 ~~~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  156 (274)
T cd06609          81 CGGGSCLDLLKPGK----LDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRN  156 (274)
T ss_pred             eCCCcHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccc
Confidence            99999998884321    111100000                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++||||||+++|+|++|..||......  ......     .....     +....   .
T Consensus       157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~~~~~~-----~~~~~-----~~~~~---~  221 (274)
T cd06609         157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--RVLFLI-----PKNNP-----PSLEG---N  221 (274)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--HHHHHh-----hhcCC-----CCCcc---c
Confidence                        122234678999999999999999999998643311  111100     00100     11111   0


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+++.+||..+|++||+++++++
T Consensus       222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         222 KFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            13456778888999999999999999985

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.3e-24  Score=170.87  Aligned_cols=186  Identities=16%  Similarity=0.241  Sum_probs=132.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.++.    .+++.+++|.+........+.+.+|+.+++.++||||+++++.+...+.++++|||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~   81 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY   81 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence            46799999999999999543    45788999999876555678899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.+++.....  .++......+                                                     
T Consensus        82 ~~~~~l~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  159 (262)
T cd06613          82 CGGGSLQDIYQVTRG--PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK  159 (262)
T ss_pred             CCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence            999999988743210  0000000000                                                     


Q ss_pred             ------------eeecC---ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ------------YALHG---VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ------------~~~~~---~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                  .....   .++.++|+||||+++|||++|..||........  ..    .. ....   ...+.  ..
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~--~~----~~-~~~~---~~~~~--~~  227 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA--LF----LI-SKSN---FPPPK--LK  227 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HH----HH-Hhcc---CCCcc--cc
Confidence                        11122   567789999999999999999999864332111  00    00 0000   00011  11


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+..+.+++.+||..+|..|||+++|+.
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            22344567889999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.91  E-value=2.6e-24  Score=174.86  Aligned_cols=188  Identities=16%  Similarity=0.252  Sum_probs=131.8

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ...++|++.+.||+|+||.+++    .+++.||+|.+........+.+.+|+.+++.++||||+++++.+...+..++||
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence            3446899999999999999554    578999999998665555677899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcC-----------------------------------------CCCccceeee----------
Q 043709          109 EHMPNKSLDYFLFDPANKG-----------------------------------------RLGWGTRVRI----------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~-----------------------------------------~~~~~~~~~i----------  137 (253)
                      ||+++++|.+++.+.....                                         ..++......          
T Consensus        96 e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~  175 (297)
T cd06656          96 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  175 (297)
T ss_pred             cccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcc
Confidence            9999999998873311000                                         0000000000          


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                                ......++.++|+|||||++|++++|..||........... ..      ...     .+  ........
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~------~~~-----~~--~~~~~~~~  241 (297)
T cd06656         176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IA------TNG-----TP--ELQNPERL  241 (297)
T ss_pred             cCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-ec------cCC-----CC--CCCCcccc
Confidence                      11223466789999999999999999999864332111000 00      000     00  01112233


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+.+++.+||..+|++||++.++++
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         242 SAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            455778889999999999999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.91  E-value=2.8e-24  Score=171.88  Aligned_cols=188  Identities=16%  Similarity=0.277  Sum_probs=128.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.++.    .+++.||+|.++.........+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~   87 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF   87 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence            35788889999999999544    46889999999765445556788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcC------------------------------------------CCCccceeee-----------
Q 043709          111 MPNKSLDYFLFDPANKG------------------------------------------RLGWGTRVRI-----------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~------------------------------------------~~~~~~~~~i-----------  137 (253)
                      +++++|.+++.......                                          ..++.....+           
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd06645          88 CGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFI  167 (267)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccccc
Confidence            99999998763211000                                          0000000000           


Q ss_pred             ---------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ---------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ---------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                               ..   ....++.++|+|||||++|+|++|..||........  ..    ... ...   ...+....  ..
T Consensus       168 ~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~--~~----~~~-~~~---~~~~~~~~--~~  235 (267)
T cd06645         168 GTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA--LF----LMT-KSN---FQPPKLKD--KM  235 (267)
T ss_pred             CcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh--HH----hhh-ccC---CCCCcccc--cC
Confidence                     00   123467789999999999999999999754332111  00    000 000   00011110  11


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+++.+||..+|++||++++|++
T Consensus       236 ~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         236 KWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             CCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            22345778889999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.91  E-value=4.2e-24  Score=171.13  Aligned_cols=184  Identities=26%  Similarity=0.331  Sum_probs=120.4

Q ss_pred             CccccccccceEee------CCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           42 NKLGEGGFGPGKLL------NGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        42 ~~ig~G~fg~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      +.||+|+||.+++.      ++..+|+|.++... ......+.+|+.+++.++||||+++++++.+....+++|||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            36899999996542      34579999987543 233457889999999999999999999999888999999999999


Q ss_pred             ChhhhccCCCCcC--CCCccceeee-------------------------------------------------------
Q 043709          115 SLDYFLFDPANKG--RLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       115 ~L~~~l~~~~~~~--~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|.++++......  ...+.....+                                                       
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD  160 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence            9999885321110  0111000000                                                       


Q ss_pred             ------------eee-------cCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 ------------YAL-------HGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 ------------~~~-------~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                  ...       ...++.++|+||||+++|||++ |..||.......  .....    . .........+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~~----~-~~~~~~~~~~  233 (269)
T cd05087         161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTYT----V-REQQLKLPKP  233 (269)
T ss_pred             CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHHH----h-hcccCCCCCC
Confidence                        000       0124678999999999999996 888886433211  11110    0 1111112222


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ....    .....+.+++.+|| .+|++|||+++|+..|.
T Consensus       234 ~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         234 RLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             ccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            2211    22345677888899 58999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=2.2e-24  Score=174.20  Aligned_cols=186  Identities=17%  Similarity=0.233  Sum_probs=129.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|+||.+++    .++..||+|.+... .......+.+|+.+++.++||||+++++.+...+..+++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            3688899999999999544    46899999998754 334456799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCcccee-----------------ee------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRV-----------------RI------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~-----------------~i------------------------------------  137 (253)
                      +++++|..++........+.+....                 .+                                    
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKT  160 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcccc
Confidence            9999999887542111111111000                 00                                    


Q ss_pred             -----------ee------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------YA------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------~~------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                 ..      ....++.++|+|||||++|++++|+.||.......  ..... . ......         .
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~-~-~~~~~~---------~  227 (286)
T cd06622         161 NIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQL-S-AIVDGD---------P  227 (286)
T ss_pred             CCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHHH-H-HHhhcC---------C
Confidence                       00      01124678999999999999999999986432211  11111 0 000011         1


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..........+..++.+||..+|++||++.++++
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         228 PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            1122235567788999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.1e-24  Score=174.43  Aligned_cols=184  Identities=18%  Similarity=0.191  Sum_probs=127.1

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +|+..+.||+|+||.+++    .+++.||+|++....   ......+.+|+.+++.++||||+++++.+..++.++++||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            478889999999999554    467899999997532   2233567889999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+.+|+|..++..... ..+++.....+                                                    
T Consensus        81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  159 (285)
T cd05605          81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIR  159 (285)
T ss_pred             ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccc
Confidence            9999999887743211 11111111110                                                    


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++||||+||++||+++|..||.......  ....+.... ..          .......
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~--~~~~~~~~~-~~----------~~~~~~~  226 (285)
T cd05605         160 GRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV--KREEVERRV-KE----------DQEEYSE  226 (285)
T ss_pred             cccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh--HHHHHHHHh-hh----------cccccCc
Confidence                        1122346778999999999999999999987433211  111110000 00          0011122


Q ss_pred             HHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      ..+..+.+++.+||..||.+||     +++++++
T Consensus       227 ~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         227 KFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             ccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            3455678899999999999999     8888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.91  E-value=7.1e-25  Score=188.94  Aligned_cols=182  Identities=15%  Similarity=0.112  Sum_probs=126.9

Q ss_pred             CccccCccccccccceEe----eC-CCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           37 NFSMENKLGEGGFGPGKL----LN-GEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      .|.+.+.||+|+||.++.    .+ ++.||+|.+..........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus        68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~  147 (478)
T PTZ00267         68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG  147 (478)
T ss_pred             eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence            389999999999999554    23 6778999876555555567888999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCC-cCCCCccceeee-----------------------------------------------------
Q 043709          112 PNKSLDYFLFDPAN-KGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~-~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      ++|+|.+++..... ...+.......+                                                     
T Consensus       148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~  227 (478)
T PTZ00267        148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDV  227 (478)
T ss_pred             CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccccc
Confidence            99999877632110 001111000000                                                     


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ......++.++|||||||++|||++|..||.....  ..+....    . .+...         ..
T Consensus       228 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--~~~~~~~----~-~~~~~---------~~  291 (478)
T PTZ00267        228 ASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--REIMQQV----L-YGKYD---------PF  291 (478)
T ss_pred             ccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-hCCCC---------CC
Confidence                          11234577889999999999999999999864321  1111111    1 01110         01


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +......+.+++.+||..+|++||++++++.
T Consensus       292 ~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        292 PCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            1123356788899999999999999999863

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.7e-24  Score=172.23  Aligned_cols=179  Identities=27%  Similarity=0.388  Sum_probs=124.5

Q ss_pred             CccccccccceEe----e---CCCEEEEEEeccccc-ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----L---NGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .   ++..+|+|.+..... ...+.+.+|+.+++.+.||||+++++++. .+..+++|||+.+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            4799999999543    2   236899999985532 34567899999999999999999999876 4568999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|.+++....   .+.+.....+                                                        
T Consensus        80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~  156 (257)
T cd05060          80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT  156 (257)
T ss_pred             CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence            99999884322   1111111111                                                        


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                  ......++.++||||||+++||+++ |..||.....  ..+...+     ....         .....
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~-----~~~~---------~~~~~  220 (257)
T cd05060         157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAML-----ESGE---------RLPRP  220 (257)
T ss_pred             CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH-----HcCC---------cCCCC
Confidence                        1122346678999999999999998 8888753321  1121111     1110         01111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ...+..+.+++.+||..+|++||++.+|++.|+++.
T Consensus       221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            223457788999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.91  E-value=1.6e-24  Score=171.57  Aligned_cols=178  Identities=24%  Similarity=0.305  Sum_probs=125.2

Q ss_pred             CccccccccceEe---eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCChh
Q 043709           42 NKLGEGGFGPGKL---LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLD  117 (253)
Q Consensus        42 ~~ig~G~fg~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~  117 (253)
                      +.||+|+||.+++   ..+..+|+|.+.... ......+.+|+.+++.++||||+++++++...+..+++|||+++|+|.
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            4689999999554   467889999987653 333457889999999999999999999999999999999999999999


Q ss_pred             hhccCCCCcCCCCccceeee------------------------------------------------------------
Q 043709          118 YFLFDPANKGRLGWGTRVRI------------------------------------------------------------  137 (253)
Q Consensus       118 ~~l~~~~~~~~~~~~~~~~i------------------------------------------------------------  137 (253)
                      +++.....  .+.+.....+                                                            
T Consensus        81 ~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (250)
T cd05085          81 SFLRKKKD--ELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI  158 (250)
T ss_pred             HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence            88743211  1111111100                                                            


Q ss_pred             ------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHH
Q 043709          138 ------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKR  210 (253)
Q Consensus       138 ------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (253)
                            ......++.++||||||+++|++++ |..||......  ......    . ..         .........+..
T Consensus       159 ~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~----~-~~---------~~~~~~~~~~~~  222 (250)
T cd05085         159 KWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQV----E-KG---------YRMSCPQKCPDD  222 (250)
T ss_pred             cccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHH----H-cC---------CCCCCCCCCCHH
Confidence                  1122345678999999999999998 78787533211  111111    0 11         011112234467


Q ss_pred             HHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          211 YSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       211 ~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      +.+++.+||..+|++||++.++++.|.
T Consensus       223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         223 VYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            888999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.91  E-value=1.8e-24  Score=171.98  Aligned_cols=186  Identities=27%  Similarity=0.384  Sum_probs=130.8

Q ss_pred             hcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEE-ecCeeEEEEeeC
Q 043709           35 TDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCV-EKGVKILIYEHM  111 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~-~~~~~~lv~e~~  111 (253)
                      ..+|++.+.||+|+||.+++  ..+..+|+|.++..  ...+.+.+|+.+++.++|+|++++++++. ..+..+++|||+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            35788999999999999554  56888999998653  33567899999999999999999999865 446789999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      ++|+|.+++++.... ...+.....+                                                      
T Consensus        83 ~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  161 (256)
T cd05082          83 AKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL  161 (256)
T ss_pred             CCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCcc
Confidence            999999988542211 1111111111                                                      


Q ss_pred             --------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 --------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 --------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                              ......++.++|||||||++|||++ |+.||.....  ..+...+     ..+         .........+
T Consensus       162 ~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~-----~~~---------~~~~~~~~~~  225 (256)
T cd05082         162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRV-----EKG---------YKMDAPDGCP  225 (256)
T ss_pred             ceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH-----hcC---------CCCCCCCCCC
Confidence                    1122346778999999999999997 8877653221  1111111     011         0111112334


Q ss_pred             HHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          209 KRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       226 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         226 PVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            5778889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.91  E-value=1.2e-25  Score=173.73  Aligned_cols=191  Identities=14%  Similarity=0.228  Sum_probs=138.6

Q ss_pred             ccHHHHHHH-hcCccccCccccccccce----EeeCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           26 FSLASISAA-TDNFSMENKLGEGGFGPG----KLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        26 ~~~~~l~~~-~~~~~~~~~ig~G~fg~~----~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      ++-+.+..+ .+-|.+++.||+|+||.+    ++.+|+.+|||.+..+  .+.+++.+|+.+|.++..|+||++||.+..
T Consensus        22 Ld~~sL~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK   99 (502)
T KOG0574|consen   22 LDSSALNKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFK   99 (502)
T ss_pred             cChhhhcCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhcc
Confidence            344445543 345889999999999984    4578999999999753  567899999999999999999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      ...+|+|||||..|++.++++-+.+  ++.....-.+                                           
T Consensus       100 ~sDLWIVMEYCGAGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAG  177 (502)
T KOG0574|consen  100 HSDLWIVMEYCGAGSISDIMRARRK--PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAG  177 (502)
T ss_pred             CCceEeehhhcCCCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccc
Confidence            9999999999999999999853221  1222111111                                           


Q ss_pred             ----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                            ++..-.|+.++||||||++..||..|++|+..-.+               ...+.-++
T Consensus       178 QLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---------------MRAIFMIP  242 (502)
T KOG0574|consen  178 QLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP---------------MRAIFMIP  242 (502)
T ss_pred             hhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc---------------cceeEecc
Confidence                                  33344599999999999999999999999753222               11111111


Q ss_pred             ccc-CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          196 DPM-LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       196 ~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ... .....+..-+..+.+++.+||-.+|++|.++-++++.
T Consensus       243 T~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  243 TKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             CCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            111 1111122234567888888999999999999998763

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=9.9e-25  Score=184.37  Aligned_cols=179  Identities=20%  Similarity=0.219  Sum_probs=133.7

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCe
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGV  103 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~  103 (253)
                      ...-++|.+.+.||+|+||+|.+    .+++.+|||+++++   ..++++....|.+++... +||.++++++++.+.++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            34457899999999999999544    67899999999876   678889999999999988 59999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCC------------CCcccee--------------------ee--------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGR------------LGWGTRV--------------------RI--------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~------------~~~~~~~--------------------~i--------------  137 (253)
                      +|+||||+.|||+..+++.+.-...            +.+....                    .+              
T Consensus       444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence            9999999999997666642221100            0000000                    00              


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ++....|+.++|-|||||+||||+.|..||.+...++  +                 .+..+.++
T Consensus       524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee--~-----------------FdsI~~d~  584 (694)
T KOG0694|consen  524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE--V-----------------FDSIVNDE  584 (694)
T ss_pred             ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH--H-----------------HHHHhcCC
Confidence                           4566779999999999999999999999997554421  1                 11111111


Q ss_pred             --CCHHHHHHHHHHhccccCCCCCCCCCH
Q 043709          203 --ASYPILKRYSNVDLFCFRENATDRPTM  229 (253)
Q Consensus       203 --~~~~~~~~~~~l~~~cl~~~p~~RPs~  229 (253)
                        ++.-++.+.+.++.+.+..+|++|--+
T Consensus       585 ~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  585 VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence              223345678888889999999999755

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.91  E-value=1.8e-24  Score=177.74  Aligned_cols=173  Identities=13%  Similarity=0.112  Sum_probs=122.5

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      +.||+|+||.+++    .++..||+|++...   .......+.+|+.+++.++||||+++++++...+.+++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4689999999654    46889999999754   2334566788999999999999999999999999999999999999


Q ss_pred             ChhhhccCCCCcCCCCccceeee---------------------------------------------------------
Q 043709          115 SLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------------  137 (253)
Q Consensus       115 ~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------------  137 (253)
                      +|..++.....   +.+.....+                                                         
T Consensus        81 ~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  157 (323)
T cd05595          81 ELFFHLSRERV---FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             cHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence            99877632210   011000000                                                         


Q ss_pred             --------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHH
Q 043709          138 --------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILK  209 (253)
Q Consensus       138 --------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (253)
                              ......++.++|||||||++|||++|..||......  ......    . ....          ..+.....
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--~~~~~~----~-~~~~----------~~p~~~~~  220 (323)
T cd05595         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELI----L-MEEI----------RFPRTLSP  220 (323)
T ss_pred             CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHH----h-cCCC----------CCCCCCCH
Confidence                    223456788999999999999999999998643221  111111    0 0000          11122345


Q ss_pred             HHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          210 RYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       210 ~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      .+.+++.+||+.||++||     ++.++++
T Consensus       221 ~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         221 EAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            677888899999999998     7888774

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.91  E-value=1.9e-24  Score=173.27  Aligned_cols=186  Identities=24%  Similarity=0.375  Sum_probs=124.6

Q ss_pred             ccccCccccccccceEee----CCC--EEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec------Ce
Q 043709           38 FSMENKLGEGGFGPGKLL----NGE--QVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK------GV  103 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~~----~~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~------~~  103 (253)
                      +.+.+.||+|+||.++..    .+.  .+|+|.++..  +....+.+.+|+.+++.++||||+++++.+...      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            456789999999996542    232  5899988754  344567789999999999999999999987532      35


Q ss_pred             eEEEEeeCCCCChhhhccCCC---CcCCCCccceeee-------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPA---NKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+++|||+.+|+|.+++....   ....+++.....+                                           
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  160 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK  160 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence            789999999999988763211   0011111111110                                           


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcc
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLW  192 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (253)
                                              ......++.++||||||+++||+++ |..||.....  ..+....     ..+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~-----~~~~~~  233 (272)
T cd05075         161 KIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYDYL-----RQGNRL  233 (272)
T ss_pred             ccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH-----HcCCCC
Confidence                                    1112336778999999999999999 6777653221  1111111     111110


Q ss_pred             ccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                               ......+..+.+++.+||+.+|++|||+.+|++.|+++
T Consensus       234 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         234 ---------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             ---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                     01112345678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=3.2e-24  Score=188.79  Aligned_cols=197  Identities=24%  Similarity=0.322  Sum_probs=142.5

Q ss_pred             HHHHHhcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIG   96 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~   96 (253)
                      .|+...+++.+.+.+|+|+||.+.+.           ....||||.++.. ...+.+.+..|+.+|+.+ +|+||+++.|
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            56677777888889999999994331           1457999999865 446678899999999998 7999999999


Q ss_pred             EEEecCeeEEEEeeCCCCChhhhccCCCCcCC-------------CCccceeee--------------------------
Q 043709           97 CCVEKGVKILIYEHMPNKSLDYFLFDPANKGR-------------LGWGTRVRI--------------------------  137 (253)
Q Consensus        97 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-------------~~~~~~~~i--------------------------  137 (253)
                      +|..++.+++|+|||..|+|..++++.+....             +.....+.+                          
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV  449 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV  449 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence            99999999999999999999999976440000             111111111                          


Q ss_pred             ------------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc
Q 043709          138 ------------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL  175 (253)
Q Consensus       138 ------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~  175 (253)
                                                                .+....|+.++||||||++|||+++.+.+..+.-....
T Consensus       450 Li~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~  529 (609)
T KOG0200|consen  450 LITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE  529 (609)
T ss_pred             EecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH
Confidence                                                      11224589999999999999999986544332211111


Q ss_pred             chhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          176 TLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      .+              .+.+....+.+.+..+..++.++|..||+.+|++||++.++.+.|...+
T Consensus       530 ~l--------------~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  530 EL--------------LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             HH--------------HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            11              1223334444445555677888888899999999999999999998854

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.91  E-value=1.5e-24  Score=175.00  Aligned_cols=187  Identities=26%  Similarity=0.368  Sum_probs=128.4

Q ss_pred             cCccccCccccccccceEee---------CCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      .+|.+.+.||+|+||.+++.         .+..||+|+++... ....+.+.+|+.+++.++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            35777899999999996552         24679999998543 233467889999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCc-------------CCCCccceeee-----------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI-----------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i-----------------------------------  137 (253)
                      +++||+.+++|.+++......             ..+.+.....+                                   
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~k  164 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVK  164 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceE
Confidence            999999999999887321100             00111000000                                   


Q ss_pred             --------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHh
Q 043709          138 --------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 --------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                      ....+.++.++|||||||++|||++ |..||.....  ..+...+   
T Consensus       165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~i---  239 (283)
T cd05091         165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVIEMI---  239 (283)
T ss_pred             ecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH---
Confidence                                            0122446778999999999999998 6666653321  1111111   


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                        ......         ......+..+.+++.+||+.+|++||++.+|++.|+.
T Consensus       240 --~~~~~~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         240 --RNRQVL---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             --HcCCcC---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence              111111         1112344567889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.91  E-value=7.9e-24  Score=169.05  Aligned_cols=187  Identities=20%  Similarity=0.297  Sum_probs=131.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||.|+||.++.    .++..+|+|++... .....+.+.+|+.+++.++|+||+++++.+..++..+++|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            4789999999999999443    46788999999754 233567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.++++.......+.+.....+                                                     
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  160 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR  160 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence            999999998854221111111110000                                                     


Q ss_pred             ----------------eeecC-ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 ----------------YALHG-VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 ----------------~~~~~-~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                      ..... .++.++|+||||+++|+|++|..||....... ......     ..      ..+...
T Consensus       161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~-----~~------~~~~~~  228 (267)
T cd06610         161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTL-----QN------DPPSLE  228 (267)
T ss_pred             cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHh-----cC------CCCCcC
Confidence                            01112 46778999999999999999999986443211 111111     00      011111


Q ss_pred             CCC-CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          201 TEA-SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       201 ~~~-~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ... ....+..+.+++.+||..||++||++.+|++
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             CccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            111 1244567788999999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=2.6e-25  Score=188.24  Aligned_cols=178  Identities=19%  Similarity=0.319  Sum_probs=133.5

Q ss_pred             ccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCChhh
Q 043709           43 KLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDY  118 (253)
Q Consensus        43 ~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~  118 (253)
                      .+|+|.||+++-    .+...+|||.+........+-+..|+.+.+.++|.|||+++|.+...+..-|+||-++||+|.+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs  661 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS  661 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence            599999999554    5667899999987777778889999999999999999999999999999999999999999999


Q ss_pred             hccCCCCc-----CCCCcc-----------c---------------------eeee------------------------
Q 043709          119 FLFDPANK-----GRLGWG-----------T---------------------RVRI------------------------  137 (253)
Q Consensus       119 ~l~~~~~~-----~~~~~~-----------~---------------------~~~i------------------------  137 (253)
                      +|+..=..     ..+.+-           .                     .+.|                        
T Consensus       662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQ  741 (1226)
T KOG4279|consen  662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ  741 (1226)
T ss_pred             HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchh
Confidence            98431100     000000           0                     0000                        


Q ss_pred             -----ee--ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHH
Q 043709          138 -----YA--LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKR  210 (253)
Q Consensus       138 -----~~--~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (253)
                           ++  ....|+.++|||||||++.||.||++||.-....+..+.              ++---...++.+......
T Consensus       742 YMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF--------------kVGmyKvHP~iPeelsae  807 (1226)
T KOG4279|consen  742 YMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF--------------KVGMYKVHPPIPEELSAE  807 (1226)
T ss_pred             hhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh--------------hhcceecCCCCcHHHHHH
Confidence                 12  234589999999999999999999999864433221111              111112235566678888


Q ss_pred             HHHHhccccCCCCCCCCCHHHHHH
Q 043709          211 YSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       211 ~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+++++|+.++|.+||++.+++.
T Consensus       808 ak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  808 AKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHcCCCcccCccHHHhcc
Confidence            999999999999999999999985

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.91  E-value=1.5e-24  Score=172.52  Aligned_cols=180  Identities=29%  Similarity=0.348  Sum_probs=125.4

Q ss_pred             CccccccccceEee-----CC--CEEEEEEeccccc-ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKLL-----NG--EQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~~-----~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|++|.+++.     .+  ..||+|.+..... ...+.+.+|+.+++.++||||+++++.+.. +..+++|||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            46899999996542     22  3699999987644 556789999999999999999999999988 889999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|.+++.+... ..+.+.....+                                                        
T Consensus        80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  158 (257)
T cd05040          80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEE  158 (257)
T ss_pred             CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceeccc
Confidence            999998854321 11222211111                                                        


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                  ......++.++|||||||++|||++ |..||.....  ......+    ......  .       ...
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~----~~~~~~--~-------~~~  223 (257)
T cd05040         159 HLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG--SQILKKI----DKEGER--L-------ERP  223 (257)
T ss_pred             CCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----HhcCCc--C-------CCC
Confidence                        0112345678999999999999998 8888753322  1111111    000100  0       011


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ...+..+.+++.+||+.+|++|||+.++++.|.+
T Consensus       224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  257 (257)
T cd05040         224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLPE  257 (257)
T ss_pred             ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence            1234567888999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.91  E-value=6.6e-25  Score=176.53  Aligned_cols=179  Identities=17%  Similarity=0.237  Sum_probs=127.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +.|+..+.||+|+||.++.    .++..||+|.+... .....+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence            3477778999999999544    45778999998754 234456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceee------------------------------------e-----------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I-----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i-----------------  137 (253)
                      +++++|.+++....    +.+.....                                    +                 
T Consensus        84 ~~~~~L~~~~~~~~----~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06642          84 LGGGSALDLLKPGP----LEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             cCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhh
Confidence            99999988773221    00000000                                    0                 


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+|||||++||+++|..|+.......  ...     .....         .......
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~-----~~~~~---------~~~~~~~  223 (277)
T cd06642         160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLF-----LIPKN---------SPPTLEG  223 (277)
T ss_pred             cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHh-----hhhcC---------CCCCCCc
Confidence                        1122346778999999999999999999875332211  000     00000         0111112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+++.+||+.+|++||++.++++
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         224 QYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            34456788999999999999999999996

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.91  E-value=1.4e-24  Score=173.84  Aligned_cols=200  Identities=16%  Similarity=0.137  Sum_probs=144.3

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +.|++++.||.|.-|+|++    .++..+|+|++.+.   ......+...|-.||+.+.||.+.++|..+.++...+++|
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            4688889999999999777    45689999999865   3555667888999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCcc--------------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWG--------------------------------------------------------  132 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~--------------------------------------------------------  132 (253)
                      |||+||+|..+.+++.... ++..                                                        
T Consensus       157 eyCpGGdL~~LrqkQp~~~-fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~  235 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKR-FSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL  235 (459)
T ss_pred             ecCCCccHHHHHhhCCCCc-cchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence            9999999988872211000 0000                                                        


Q ss_pred             -------------------------------ce-------------eee---------------------eeecCccccc
Q 043709          133 -------------------------------TR-------------VRI---------------------YALHGVFSIK  147 (253)
Q Consensus       133 -------------------------------~~-------------~~i---------------------~~~~~~~~~~  147 (253)
                                                     ..             ..+                     ++.+...+.+
T Consensus       236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsA  315 (459)
T KOG0610|consen  236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSA  315 (459)
T ss_pred             eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCch
Confidence                                           00             000                     4566678899


Q ss_pred             cceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCC
Q 043709          148 SDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRP  227 (253)
Q Consensus       148 ~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  227 (253)
                      +|-|+||+++|||+.|..||.+....               ..+..++...+........+..+.+||.+.|..||.+|-
T Consensus       316 VDWWtfGIflYEmLyG~TPFKG~~~~---------------~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRl  380 (459)
T KOG0610|consen  316 VDWWTFGIFLYEMLYGTTPFKGSNNK---------------ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRL  380 (459)
T ss_pred             hhHHHHHHHHHHHHhCCCCcCCCCch---------------hhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence            99999999999999999999755432               222233333333333346677899999999999999998


Q ss_pred             C----HHHHHH--HHhhcccCCCCCCCCCC
Q 043709          228 T----MLEIVS--MLSNEIVNLPYPQQSAF  251 (253)
Q Consensus       228 s----~~~il~--~L~~~~~~~~~~~~~~~  251 (253)
                      .    +.+|-+  .++.+.=++-+-..||+
T Consensus       381 g~~rGA~eIK~HpFF~gVnWaLir~~~PP~  410 (459)
T KOG0610|consen  381 GSKRGAAEIKRHPFFEGVNWALIRCARPPE  410 (459)
T ss_pred             ccccchHHhhcCccccCCChhheeccCCCc
Confidence            8    777653  24444333334444443

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3.1e-24  Score=176.45  Aligned_cols=189  Identities=20%  Similarity=0.241  Sum_probs=139.2

Q ss_pred             hcCccccCccccccccc----eEeeCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .+-|.+.+.||+|.|+.    .+..+|+.||||++.+..  .-....+.+|++.|+-++|||||++|.+......+|+|+
T Consensus        17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            35688889999999998    444799999999998653  333457899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCc--------------------------------CCCCccceeee-------------------
Q 043709          109 EHMPNKSLDYFLFDPANK--------------------------------GRLGWGTRVRI-------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~--------------------------------~~~~~~~~~~i-------------------  137 (253)
                      |+-.+|+|.+||-+....                                ....+...+++                   
T Consensus        97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~  176 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT  176 (864)
T ss_pred             EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence            999999999998321110                                00000000000                   


Q ss_pred             ------------eeecCccc-cccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ------------YALHGVFS-IKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ------------~~~~~~~~-~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                  .+++..|+ +++||||||||||-|++|..||.-....+               .+..+.+=.  -..+
T Consensus       177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE---------------TLTmImDCK--YtvP  239 (864)
T KOG4717|consen  177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE---------------TLTMIMDCK--YTVP  239 (864)
T ss_pred             cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh---------------hhhhhhccc--ccCc
Confidence                        34445564 57899999999999999999987443321               111122211  2234


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                      .....+..+||.+||..||.+|.+.++|+  .+|+.+.
T Consensus       240 shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  240 SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD  277 (864)
T ss_pred             hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence            46677899999999999999999999998  5677665

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.91  E-value=6.2e-24  Score=175.85  Aligned_cols=184  Identities=18%  Similarity=0.182  Sum_probs=139.5

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~  105 (253)
                      ....|++.+.||+|.||.++.    .+|+.+|+|.+.+..   ....+...+|+.+|+++. |||||++++++.+.+.++
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            345799999999999999443    569999999997652   234578999999999998 999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +|||+|.||+|.+.+....    ........+                                                
T Consensus       113 lvmEL~~GGeLfd~i~~~~----~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~  188 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKKH----YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF  188 (382)
T ss_pred             EEEEecCCchHHHHHHHcc----CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence            9999999999999884320    000000000                                                


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          +.....|+..+||||+|+++|.|++|.+||..........  .+     ..+.      .
T Consensus       189 ~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--~i-----~~~~------~  255 (382)
T KOG0032|consen  189 IKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--AI-----LRGD------F  255 (382)
T ss_pred             ccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--HH-----HcCC------C
Confidence                                3344679999999999999999999999987554322111  11     1111      1


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+........+.+++..|+..||.+|+++.++++
T Consensus       256 ~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  256 DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            3344444556778889999999999999999999997

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=3.6e-25  Score=182.85  Aligned_cols=186  Identities=19%  Similarity=0.276  Sum_probs=131.4

Q ss_pred             HHhcCccccCccccccccceEe---eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~l  106 (253)
                      +....|++.+.||+||-++|++   .+...||+|++...  +.....-|..|+..|.+|+ |.+||+++++-..++.+||
T Consensus       358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm  437 (677)
T KOG0596|consen  358 VKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM  437 (677)
T ss_pred             ECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence            3445699999999999999666   34567888888644  5667788999999999995 9999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||-. .||..+|+..... ...|..+..+                                                 
T Consensus       438 vmE~Gd-~DL~kiL~k~~~~-~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTs  515 (677)
T KOG0596|consen  438 VMECGD-IDLNKILKKKKSI-DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTS  515 (677)
T ss_pred             Eeeccc-ccHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccc
Confidence            999765 6999999543322 1222211111                                                 


Q ss_pred             ----------------------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC
Q 043709          138 ----------------------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS  190 (253)
Q Consensus       138 ----------------------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  190 (253)
                                            .-     ..-..+.++||||||||||+|+.|+.||...       ...+       ..
T Consensus       516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~-------~n~~-------aK  581 (677)
T KOG0596|consen  516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI-------INQI-------AK  581 (677)
T ss_pred             eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH-------HHHH-------HH
Confidence                                  00     0112668999999999999999999998521       1111       11


Q ss_pred             ccccccccCCCCCCH-HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          191 LWDLMDPMLQTEASY-PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +..+.++...-+++. .....++++|..||..||.+||++.++|+
T Consensus       582 l~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  582 LHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            223333322222221 11123889999999999999999999986

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.5e-24  Score=173.31  Aligned_cols=189  Identities=24%  Similarity=0.335  Sum_probs=132.0

Q ss_pred             cCccccCccccccccceEee----CCC----EEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKLL----NGE----QVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~----~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .+|++.+.||+|+||.+++.    ++.    .+|+|.+.... ......+.+|+.+++.++||||+++++++.. ...++
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~   85 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL   85 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence            56888899999999995542    232    58999887553 3445678999999999999999999999987 78899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+++|+|.+++.+....  +.+.....+                                                 
T Consensus        86 v~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          86 ITQLMPLGCLLDYVRNHKDN--IGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EEecCCCCcHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence            99999999999987432111  111111100                                                 


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++|+||||+++||+++ |..||......  .+....     ..+..  .    
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~-----~~~~~--~----  230 (279)
T cd05057         164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLL-----EKGER--L----  230 (279)
T ss_pred             cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHH-----hCCCC--C----
Confidence                              1112456778999999999999998 88887643221  111111     11110  0    


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCC
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL  243 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~  243 (253)
                         ..+......+..++.+||..+|..||++.++++.|+.+.++.
T Consensus       231 ---~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05057         231 ---PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP  272 (279)
T ss_pred             ---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence               111112245778888999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.91  E-value=2e-24  Score=173.15  Aligned_cols=185  Identities=18%  Similarity=0.237  Sum_probs=127.5

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEec------
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEK------  101 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~------  101 (253)
                      .+.+.|++.+.||+|+||.+++    .+++.||+|.+.... .....+..|+.+++.+ +||||+++++.+...      
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   81 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence            4567799999999999999554    467899999997543 4456788999999998 699999999998753      


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------  137 (253)
                      +..+++|||+++|+|.+++..... ..+.+.....+                                            
T Consensus        82 ~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~  160 (272)
T cd06637          82 DQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  160 (272)
T ss_pred             cEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence            458999999999999998853211 11111110100                                            


Q ss_pred             ---------------------eee-----cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 ---------------------YAL-----HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 ---------------------~~~-----~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                           ...     ...++.++|||||||++|||++|..||.........       ....... 
T Consensus       161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~-------~~~~~~~-  232 (272)
T cd06637         161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL-------FLIPRNP-  232 (272)
T ss_pred             cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH-------HHHhcCC-
Confidence                                 000     224667899999999999999999998533221110       0000000 


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                             .........+..+.+++.+||..+|.+|||+.++++
T Consensus       233 -------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         233 -------APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             -------CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence                   001111123456788999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.90  E-value=3.6e-24  Score=176.32  Aligned_cols=174  Identities=14%  Similarity=0.105  Sum_probs=123.2

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      +.||+|+||.+++    .+++.||+|++...   .......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999654    46889999999754   2344567889999999999999999999999999999999999999


Q ss_pred             ChhhhccCCCCcCCCCccceeee---------------------------------------------------------
Q 043709          115 SLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------------  137 (253)
Q Consensus       115 ~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------------  137 (253)
                      +|..++.....   +.+.....+                                                         
T Consensus        81 ~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  157 (328)
T cd05593          81 ELFFHLSRERV---FSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCG  157 (328)
T ss_pred             CHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccC
Confidence            99877632110   111000000                                                         


Q ss_pred             --------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHH
Q 043709          138 --------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILK  209 (253)
Q Consensus       138 --------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (253)
                              .+....++.++|||||||++|||++|..||......  ......     ....          ...+.....
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--~~~~~~-----~~~~----------~~~p~~~~~  220 (328)
T cd05593         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELI-----LMED----------IKFPRTLSA  220 (328)
T ss_pred             CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--HHHHHh-----ccCC----------ccCCCCCCH
Confidence                    223345788999999999999999999998643221  111110     0000          011122345


Q ss_pred             HHHHHhccccCCCCCCCC-----CHHHHHHH
Q 043709          210 RYSNVDLFCFRENATDRP-----TMLEIVSM  235 (253)
Q Consensus       210 ~~~~l~~~cl~~~p~~RP-----s~~~il~~  235 (253)
                      .+.+++.+||..||++||     ++.++++.
T Consensus       221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            678888899999999997     88888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=8e-24  Score=171.15  Aligned_cols=194  Identities=19%  Similarity=0.221  Sum_probs=128.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~lv~  108 (253)
                      ++|+..+.||.|++|.++.    .+++.+|+|.+... .......+.+|+.+++.++||||+++++++...  +.++++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            3688889999999999443    46788999999754 234456799999999999999999999998653  4689999


Q ss_pred             eeCCCCChhhhccCCCC-cCCCCccceeee--------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPAN-KGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||+++++|.+++..... ...+.......+                                                  
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA  160 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence            99999999887532110 000110000000                                                  


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++||||+||++|+|++|..||.............. .... ..........   ....
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~---~~~~  235 (287)
T cd06621         161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL-SYIV-NMPNPELKDE---PGNG  235 (287)
T ss_pred             ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH-HHHh-cCCchhhccC---CCCC
Confidence                         11224567789999999999999999999875533111111111 1111 1011111100   0101


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+.+++.+||..+|++|||+.+++.
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             CchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            123467889999999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.90  E-value=4.6e-24  Score=169.08  Aligned_cols=179  Identities=27%  Similarity=0.374  Sum_probs=125.6

Q ss_pred             CccccccccceEe---eCCCEEEEEEeccccc-ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCChh
Q 043709           42 NKLGEGGFGPGKL---LNGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLD  117 (253)
Q Consensus        42 ~~ig~G~fg~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~  117 (253)
                      +.||.|+||.++.   ..++.||+|.+..... ...+.+.+|+.++++++||||+++++++...+..+++|||+.+++|.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~   80 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL   80 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence            4689999999543   3388999999876533 35567999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCcCCCCccceeee------------------------------------------------------------
Q 043709          118 YFLFDPANKGRLGWGTRVRI------------------------------------------------------------  137 (253)
Q Consensus       118 ~~l~~~~~~~~~~~~~~~~i------------------------------------------------------------  137 (253)
                      +++.....  ...+.....+                                                            
T Consensus        81 ~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (251)
T cd05041          81 TFLRKKKN--RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP  158 (251)
T ss_pred             HHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence            88843211  1111100000                                                            


Q ss_pred             -------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHH
Q 043709          138 -------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILK  209 (253)
Q Consensus       138 -------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (253)
                             ....+.++.++|+||||+++||+++ |..||......  .....+     ...         .....+...+.
T Consensus       159 ~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~-----~~~---------~~~~~~~~~~~  222 (251)
T cd05041         159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERI-----ESG---------YRMPAPQLCPE  222 (251)
T ss_pred             eccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHH-----hcC---------CCCCCCccCCH
Confidence                   1122346778999999999999999 67776433221  111111     000         01111123345


Q ss_pred             HHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          210 RYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       210 ~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      .+.+++.+||..+|.+||++.++++.|++
T Consensus       223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         223 EIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence            78889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=1e-24  Score=163.01  Aligned_cols=182  Identities=20%  Similarity=0.156  Sum_probs=134.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++++.||+|-||.+++    .++..||+|++.+.   .......+.+|+++-+.|+||||+++|+++.+...+|+++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            4688899999999999665    56788999999754   2344467899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCc---CCCCccceeee------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANK---GRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~---~~~~~~~~~~i------------------------------------------------  137 (253)
                      ||.++|+|...|......   ....+....++                                                
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~t  181 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKT  181 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCcee
Confidence            999999999998632211   11111111111                                                


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++..+|+|++|+++||++.|.+||.....  .+....+             ..-.  -..+..
T Consensus       182 lcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--~etYkrI-------------~k~~--~~~p~~  244 (281)
T KOG0580|consen  182 LCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--SETYKRI-------------RKVD--LKFPST  244 (281)
T ss_pred             eecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--HHHHHHH-------------HHcc--ccCCcc
Confidence                       33445688999999999999999999999875441  1111111             1111  111234


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ++..+.+++.+|+..+|.+|....|+++
T Consensus       245 is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  245 ISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             cChhHHHHHHHHhccCccccccHHHHhh
Confidence            4567888999999999999999999885

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.90  E-value=2.4e-24  Score=171.09  Aligned_cols=183  Identities=24%  Similarity=0.351  Sum_probs=129.5

Q ss_pred             cCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           36 DNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      ++|++.+.||+|+||.++.  ..++.||+|.++..  ...+.+.+|+.+++.++||||+++++++... ..+++|||+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~   82 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSK   82 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCC
Confidence            5689999999999999554  56788999998653  2346789999999999999999999998764 47999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|.+++...... .+.+.....+                                                        
T Consensus        83 ~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  161 (254)
T cd05083          83 GNLVNFLRTRGRA-LVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPV  161 (254)
T ss_pred             CCHHHHHHhcCcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCc
Confidence            9999988542211 1111111100                                                        


Q ss_pred             ------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHH
Q 043709          138 ------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKR  210 (253)
Q Consensus       138 ------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (253)
                            ......++.++|+||||+++|||++ |..||......  ...     .....+         .........+..
T Consensus       162 ~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~-----~~~~~~---------~~~~~~~~~~~~  225 (254)
T cd05083         162 KWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVK-----ECVEKG---------YRMEPPEGCPAD  225 (254)
T ss_pred             eecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHH-----HHHhCC---------CCCCCCCcCCHH
Confidence                  1223456778999999999999998 78777543221  111     111111         111112233466


Q ss_pred             HHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          211 YSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       211 ~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      +.+++.+||+.+|+.||++++|+..|++
T Consensus       226 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         226 VYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            7889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.90  E-value=7.9e-24  Score=169.12  Aligned_cols=181  Identities=19%  Similarity=0.331  Sum_probs=126.4

Q ss_pred             CccccCccccccccceEe---eCCCEEEEEEecccc------cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           37 NFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQS------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      +|++.+.||+|+||.+++   .+++.+|+|.+....      ....+.+.+|+.+++.++|+||+++++++...+..+++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            478899999999999554   467889999986431      12235688999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      +||+++++|.+++.+...   +.......+                                                  
T Consensus        81 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  157 (265)
T cd06631          81 MEFVPGGSISSILNRFGP---LPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL  157 (265)
T ss_pred             EecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence            999999999998843211   111100000                                                  


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++|+||||+++|++++|..||........     . .........    .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-----~-~~~~~~~~~----~  227 (265)
T cd06631         158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-----M-FYIGAHRGL----M  227 (265)
T ss_pred             cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-----H-HHhhhccCC----C
Confidence                                 11122356789999999999999999999864322110     0 000000000    0


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +.    ........+.+++.+||..+|++||++.++++
T Consensus       228 ~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         228 PR----LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             CC----CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            11    11223456788889999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.90  E-value=2.4e-24  Score=171.81  Aligned_cols=183  Identities=23%  Similarity=0.319  Sum_probs=122.3

Q ss_pred             CccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEe-cCeeEEEEeeCC
Q 043709           42 NKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-KGVKILIYEHMP  112 (253)
Q Consensus        42 ~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-~~~~~lv~e~~~  112 (253)
                      +.||+|+||.+++.       .+..+|+|.+... .....+.+.+|+.+++.++||||+++++++.. ++..+++|||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            46899999996531       2357999998643 33446788899999999999999999998764 456899999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|.+++......  ..+.....+                                                       
T Consensus        81 ~~~L~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  158 (262)
T cd05058          81 HGDLRNFIRSETHN--PTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN  158 (262)
T ss_pred             CCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence            99999988432111  011000000                                                       


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ......++.++|||||||++|||++|+.|+.... ....+....    . .+..         ...
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-~~~~~~~~~----~-~~~~---------~~~  223 (262)
T cd05058         159 HTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-DSFDITVYL----L-QGRR---------LLQ  223 (262)
T ss_pred             cccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHHH----h-cCCC---------CCC
Confidence                          0112345678999999999999999765533221 111111111    1 1100         001


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ....+..+.+++.+||..+|++||++.+|++.|+++..
T Consensus       224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            11223568889999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.90  E-value=6.3e-24  Score=171.28  Aligned_cols=182  Identities=18%  Similarity=0.250  Sum_probs=127.1

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      -|++.+.||+|+||.+++    .++..+++|.+........+.+.+|+.+++.++||||+++++.+...+..++++||++
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            367788999999999554    3577889999976555666789999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|..++.+...  .+.+.....+                                                       
T Consensus        86 ~~~l~~~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  163 (282)
T cd06643          86 GGAVDAVMLELER--PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF  163 (282)
T ss_pred             CCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccccccccc
Confidence            9999887632111  1111110000                                                       


Q ss_pred             ----------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ----------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ----------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                ..     ....++.++|||||||++|||++|+.||.......  ...    ... ........       
T Consensus       164 ~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~----~~~-~~~~~~~~-------  229 (282)
T cd06643         164 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLL----KIA-KSEPPTLA-------  229 (282)
T ss_pred             cccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HHH----HHh-hcCCCCCC-------
Confidence                      00     12335668999999999999999999976432211  100    000 00000111       


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+...+..+.+++.+||+.+|++||++.++++
T Consensus       230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         230 QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11123456788999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.90  E-value=3.1e-24  Score=177.40  Aligned_cols=199  Identities=16%  Similarity=0.158  Sum_probs=125.4

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----CeeE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----GVKI  105 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~~~~  105 (253)
                      +|++.+.||+|+||.++.    .++..||||++...  .......+.+|+.+++.++||||+++++++...     ..++
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            478889999999999544    56889999998743  233445788999999999999999999988643     2489


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++||||. ++|.+++.....   +.+.....+                                                
T Consensus        81 lv~e~~~-~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  156 (338)
T cd07859          81 VVFELME-SDLHQVIKANDD---LTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND  156 (338)
T ss_pred             EEEecCC-CCHHHHHHhccc---CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence            9999996 688877632110   111000000                                                


Q ss_pred             --------------------ee--ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhH----------hh
Q 043709          138 --------------------YA--LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIW----------NL  185 (253)
Q Consensus       138 --------------------~~--~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~----------~~  185 (253)
                                          ..  ....++.++|||||||++|||++|+.||.......  .......          ..
T Consensus       157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~  234 (338)
T cd07859         157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH--QLDLITDLLGTPSPETISR  234 (338)
T ss_pred             cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH--HHHHHHHHhCCCCHHHHHH
Confidence                                01  11457788999999999999999999986443210  0000000          00


Q ss_pred             hcCCCcccc---ccccCC---CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhccc
Q 043709          186 WNDGSLWDL---MDPMLQ---TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIV  241 (253)
Q Consensus       186 ~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~  241 (253)
                      .........   ......   ..........+.+++.+||+.||++|||++++++  .++....
T Consensus       235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            000000000   000000   0000122356778999999999999999999994  3555443

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.90  E-value=7.3e-24  Score=172.69  Aligned_cols=196  Identities=15%  Similarity=0.121  Sum_probs=126.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            46799999999999999554    468899999997542 2334567899999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+. ++|.+++......  +.......+                                                    
T Consensus        84 ~~~-~~l~~~~~~~~~~--~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  160 (303)
T cd07869          84 YVH-TDLCQYMDKHPGG--LHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY  160 (303)
T ss_pred             CCC-cCHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence            996 5776665321100  010000000                                                    


Q ss_pred             -------------e-eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc--CCCcc------ccc
Q 043709          138 -------------Y-ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN--DGSLW------DLM  195 (253)
Q Consensus       138 -------------~-~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~  195 (253)
                                   . .....++.++||||+||++|||++|..||.........+. ........  .....      ...
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  239 (303)
T cd07869         161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLE-RIFLVLGTPNEDTWPGVHSLPHFK  239 (303)
T ss_pred             CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHH-HHHHHhCCCChhhccchhhccccc
Confidence                         0 1123467789999999999999999999875432211111 11010000  00000      000


Q ss_pred             cccCC---CCCCH------HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 DPMLQ---TEASY------PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 ~~~~~---~~~~~------~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....   .....      ..+..+.+++.+||+.||++|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            00000   00000      11245778899999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=8.9e-24  Score=177.67  Aligned_cols=190  Identities=14%  Similarity=0.157  Sum_probs=124.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..+|++.+.||+|+||.+++    .+++.||+|....      +.+.+|+.+++.++||||+++++++......++++|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            35799999999999999554    5788999997542      3578999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +. ++|..++.....   +.+.....+                                                     
T Consensus       165 ~~-~~L~~~l~~~~~---l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~  240 (391)
T PHA03212        165 YK-TDLYCYLAAKRN---IAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY  240 (391)
T ss_pred             CC-CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence            96 677766522110   111000000                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC-----cchhhhhhHhhhc-CCCc-------
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS-----LTLLGYVIWNLWN-DGSL-------  191 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~-----~~~~~~~~~~~~~-~~~~-------  191 (253)
                                   ......++.++|||||||++|||++|..|+.......     ...+..+...... ....       
T Consensus       241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~  320 (391)
T PHA03212        241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQAN  320 (391)
T ss_pred             ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHH
Confidence                         1223457889999999999999999998875432211     0011111000000 0000       


Q ss_pred             -ccc---------ccccCCC--CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          192 -WDL---------MDPMLQT--EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       192 -~~~---------~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       ...         ..+..+.  ......+..+.+++.+||+.||.+|||++++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence             000         0000000  001134557888999999999999999999994

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.90  E-value=1.2e-24  Score=181.93  Aligned_cols=186  Identities=18%  Similarity=0.204  Sum_probs=129.1

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+.+++
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            446799999999999999654    46889999999643   23344567899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccce----------------------------------eee---------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTR----------------------------------VRI---------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~----------------------------------~~i---------------  137 (253)
                      ||||+++|+|.+++......  ..+...                                  ..+               
T Consensus       121 v~Ey~~gg~L~~~l~~~~l~--~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~  198 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYDIP--EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV  198 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCC--HHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence            99999999999887432100  000000                                  000               


Q ss_pred             ---------------eee----cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ---------------YAL----HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ---------------~~~----~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                     ...    ...++.++|||||||++|||++|..||......  ...    .........       
T Consensus       199 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~----~~i~~~~~~-------  265 (370)
T cd05596         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTY----SKIMDHKNS-------  265 (370)
T ss_pred             cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--HHH----HHHHcCCCc-------
Confidence                           000    123678899999999999999999998754321  111    111111100       


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCC--CCCHHHHHH
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATD--RPTMLEIVS  234 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPs~~~il~  234 (253)
                      .........+..+.+++.+||+.+|.+  ||+++++++
T Consensus       266 ~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         266 LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            111111224467788889999999988  999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.90  E-value=2.6e-24  Score=171.47  Aligned_cols=186  Identities=27%  Similarity=0.350  Sum_probs=128.1

Q ss_pred             hcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           35 TDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      .++|.+.+.||+|++|.+++   ..+..+|+|.+.... ...+.+.+|+.+++.++|||++++++++. .+..+++|||+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   82 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM   82 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence            45689999999999999654   334579999886432 33467899999999999999999999875 45689999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      .+|+|.+++..... ....+.....+                                                      
T Consensus        83 ~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05069          83 GKGSLLDFLKEGDG-KYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ  161 (260)
T ss_pred             CCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccC
Confidence            99999998854221 11111111111                                                      


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                  ......++.++||||||+++||+++ |..||.....  .......    . ..         ......
T Consensus       162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~----~-~~---------~~~~~~  225 (260)
T cd05069         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--REVLEQV----E-RG---------YRMPCP  225 (260)
T ss_pred             CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----H-cC---------CCCCCC
Confidence                        0111335668999999999999999 7777753221  1111111    0 01         001111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ...+..+.+++.+||..+|++||++++|++.|++.
T Consensus       226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  260 (260)
T cd05069         226 QGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY  260 (260)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            23446788899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.90  E-value=3e-24  Score=173.37  Aligned_cols=195  Identities=18%  Similarity=0.227  Sum_probs=131.7

Q ss_pred             ccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEE-
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCV-   99 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~-   99 (253)
                      +.++++..+.++|++.+.||+|+||.+++    .+++.+|+|.+... ......+..|+.+++.+ +||||+++++++. 
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   86 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK   86 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence            55677888899999999999999999554    46789999988643 22335678899999999 6999999999884 


Q ss_pred             ----ecCeeEEEEeeCCCCChhhhccCCC-CcCCCCccceee------------------------------------e-
Q 043709          100 ----EKGVKILIYEHMPNKSLDYFLFDPA-NKGRLGWGTRVR------------------------------------I-  137 (253)
Q Consensus       100 ----~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~------------------------------------i-  137 (253)
                          .++..+++|||+++|+|.+++.... ....+.......                                    + 
T Consensus        87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~  166 (286)
T cd06638          87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV  166 (286)
T ss_pred             cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence                3456899999999999988763210 000111000000                                    0 


Q ss_pred             ----------------------------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh
Q 043709          138 ----------------------------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 ----------------------------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                  .+     ....++.++||||+||++|||++|..||........ +.      
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-~~------  239 (286)
T cd06638         167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-LF------  239 (286)
T ss_pred             cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-Hh------
Confidence                                        00     112367789999999999999999999864432110 00      


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ............+       ......+.+++.+||+.+|++|||+.+|++.
T Consensus       240 ~~~~~~~~~~~~~-------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         240 KIPRNPPPTLHQP-------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             hccccCCCcccCC-------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            0000000011111       1123467889999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.90  E-value=7.2e-25  Score=179.81  Aligned_cols=170  Identities=18%  Similarity=0.129  Sum_probs=118.5

Q ss_pred             CccccccccceEe-------eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           42 NKLGEGGFGPGKL-------LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        42 ~~ig~G~fg~~~~-------~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      +.||+|+||.+++       .+++.||+|++....  ......+..|+.++++++||||+++++++...+..++||||+.
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            6799999999653       367899999997542  2334567889999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|.+++.....   +++.....+                                                       
T Consensus        82 ~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~  158 (318)
T cd05582          82 GGDLFTRLSKEVM---FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF  158 (318)
T ss_pred             CCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence            9999888733211   111100000                                                       


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                                ......++.++|||||||++|||++|+.||.....  ......+    .. ..          ...+...
T Consensus       159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--~~~~~~i----~~-~~----------~~~p~~~  221 (318)
T cd05582         159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--KETMTMI----LK-AK----------LGMPQFL  221 (318)
T ss_pred             cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--HHHHHHH----Hc-CC----------CCCCCCC
Confidence                      11223467899999999999999999999864321  1111111    00 00          0111123


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHH
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLE  231 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~  231 (253)
                      ...+.+++.+||+.||++||++.+
T Consensus       222 ~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         222 SPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CHHHHHHHHHHhhcCHhHcCCCCC
Confidence            456778888899999999999554

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.90  E-value=3.2e-24  Score=170.52  Aligned_cols=181  Identities=21%  Similarity=0.278  Sum_probs=128.2

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|+||.+++    .+++.||+|.+...  .....+.+.+|+.+++.++||||+++++++...+..++++||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            478899999999999443    46789999998643  233456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.+++...... ..++.....+                                                     
T Consensus        81 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~  159 (256)
T cd08218          81 CEGGDLYKKINAQRGV-LFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR  159 (256)
T ss_pred             CCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence            9999998887432110 1111111100                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+|||||++|++++|..||......  ....    ... .+..         .....
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--~~~~----~~~-~~~~---------~~~~~  223 (256)
T cd08218         160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK--NLVL----KII-RGSY---------PPVSS  223 (256)
T ss_pred             hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH--HHHH----HHh-cCCC---------CCCcc
Confidence                        112234567899999999999999999997643211  1111    111 1111         11122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+.+++.+||+.+|++||++.+|++
T Consensus       224 ~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         224 HYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            33456888999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.5e-24  Score=180.24  Aligned_cols=183  Identities=20%  Similarity=0.180  Sum_probs=128.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||||++...   .......+..|+.++..++||||+++++++.+++..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            4789999999999999654    45889999999754   2345567889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++.+..   .+.......+                                                   
T Consensus        81 e~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          81 EYMPGGDLMNLLIRKD---VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence            9999999998874321   0000000000                                                   


Q ss_pred             -------------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC
Q 043709          138 -------------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS  174 (253)
Q Consensus       138 -------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~  174 (253)
                                                                 ......++.++|||||||++|||++|..||.......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~  237 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE  237 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence                                                       1122346789999999999999999999987543211


Q ss_pred             cchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCC-HHHHHHH
Q 043709          175 LTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPT-MLEIVSM  235 (253)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs-~~~il~~  235 (253)
                        ..    .........       .........+..+.+++.+|+. +|.+||+ ++++++.
T Consensus       238 --~~----~~i~~~~~~-------~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         238 --TY----NKIINWKES-------LRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             --HH----HHHhccCCc-------ccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence              11    111110000       0001111134667788888997 9999999 9999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.90  E-value=6.9e-24  Score=170.65  Aligned_cols=179  Identities=17%  Similarity=0.243  Sum_probs=127.3

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +-|+..+.||+|+||.+++    .+++.+|+|.+... .....+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus         4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence            3477889999999999654    46789999998643 233456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|..++....    +++.....+                                                     
T Consensus        84 ~~~~~l~~~i~~~~----~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06641          84 LGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             CCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhc
Confidence            99999998874321    011100000                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+|||||++|++++|..||......  ...    . ......         ......
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~----~-~~~~~~---------~~~~~~  223 (277)
T cd06641         160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVL----F-LIPKNN---------PPTLEG  223 (277)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHH----H-HHhcCC---------CCCCCc
Confidence                        111234567899999999999999999997532211  111    0 010111         111122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+++.+||..+|++||++.++++
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         224 NYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            34466788899999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.90  E-value=7e-24  Score=172.02  Aligned_cols=183  Identities=16%  Similarity=0.239  Sum_probs=131.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.+++    .++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            46899999999999999554    46788999999755445567789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceee------------------------------------e-----------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I-----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i-----------------  137 (253)
                      +++|+|.+++.+...    .+.....                                    +                 
T Consensus        98 ~~~~~L~~~~~~~~l----~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~  173 (293)
T cd06647          98 LAGGSLTDVVTETCM----DEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  173 (293)
T ss_pred             CCCCcHHHHHhhcCC----CHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence            999999988743210    0000000                                    0                 


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+||||+++|++++|..||.........  ...    ....      .+.  .....
T Consensus       174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~--~~~----~~~~------~~~--~~~~~  239 (293)
T cd06647         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL--YLI----ATNG------TPE--LQNPE  239 (293)
T ss_pred             cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe--eeh----hcCC------CCC--CCCcc
Confidence                        122344678899999999999999999998643321110  000    0000      000  11122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      .....+.+++.+||..+|++||++.+++..
T Consensus       240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            344567789999999999999999999843

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.90  E-value=1.7e-23  Score=175.82  Aligned_cols=84  Identities=20%  Similarity=0.255  Sum_probs=73.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .|+.++.||+|+||++++    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+.+++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            688999999999999654    57889999999753   23445678999999999999999999999999999999999


Q ss_pred             eCCCCChhhhc
Q 043709          110 HMPNKSLDYFL  120 (253)
Q Consensus       110 ~~~~g~L~~~l  120 (253)
                      |+++|+|.+++
T Consensus        82 ~~~gg~L~~~l   92 (381)
T cd05626          82 YIPGGDMMSLL   92 (381)
T ss_pred             cCCCCcHHHHH
Confidence            99999998877

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.90  E-value=4e-24  Score=169.91  Aligned_cols=183  Identities=26%  Similarity=0.434  Sum_probs=128.2

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .+|++.+.||+|+||.+++   ..+..+|+|.+.... .....+.+|+.+++.++||||+++++++......+++|||+.
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            4688889999999999554   347789999887532 334678999999999999999999999999899999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|.+++.....  .+.+.....+                                                       
T Consensus        83 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05112          83 HGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG  160 (256)
T ss_pred             CCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence            9999988743211  1111110000                                                       


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                 ....+.++.++||||||+++||+++ |..||.....  ..+..    ... .+  .....+.       
T Consensus       161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~----~~~-~~--~~~~~~~-------  224 (256)
T cd05112         161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--SEVVE----TIN-AG--FRLYKPR-------  224 (256)
T ss_pred             CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHHHH----HHh-CC--CCCCCCC-------
Confidence                       1112345668999999999999998 7887753221  11111    111 00  0111111       


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ..+..+.+++.+||..+|++||++.++++.|.
T Consensus       225 ~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         225 LASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            12356888999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.90  E-value=3e-24  Score=172.79  Aligned_cols=177  Identities=16%  Similarity=0.182  Sum_probs=118.6

Q ss_pred             cccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      ||+|+||.+++    .+++.||+|++....   ......+..|+.+++.++||||+++++.+.++...+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            69999999654    468999999996431   22234566799999999999999999999999999999999999999


Q ss_pred             hhhccCCCCcCCCCccceeee-----------------------------------------------------------
Q 043709          117 DYFLFDPANKGRLGWGTRVRI-----------------------------------------------------------  137 (253)
Q Consensus       117 ~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------------  137 (253)
                      .+++...... .+.+.....+                                                           
T Consensus        81 ~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05607          81 KYHIYNVGER-GLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG  159 (277)
T ss_pred             HHHHHhcccc-CCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence            8776332110 1111111100                                                           


Q ss_pred             -----eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHH
Q 043709          138 -----YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYS  212 (253)
Q Consensus       138 -----~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (253)
                           ......++.++||||+||++|||++|..||........  ...+..... ..        .... ........+.
T Consensus       160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~-~~--------~~~~-~~~~~~~~~~  227 (277)
T cd05607         160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTL-ED--------EVKF-EHQNFTEESK  227 (277)
T ss_pred             ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhh-cc--------cccc-ccccCCHHHH
Confidence                 11233477899999999999999999999864432111  001101100 00        0000 0112345678


Q ss_pred             HHhccccCCCCCCCCCHHHHH
Q 043709          213 NVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       213 ~l~~~cl~~~p~~RPs~~~il  233 (253)
                      +++.+||+.||++||++.+++
T Consensus       228 ~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         228 DICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             HHHHHHhccCHhhCCCCccch
Confidence            888999999999999996655

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.90  E-value=1e-23  Score=168.31  Aligned_cols=187  Identities=20%  Similarity=0.262  Sum_probs=130.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|+..+.||+|++|.+++    .+++.+|+|.+.... ....+.+.+|+.+++.++||||+++++.+...+..++++||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            3678889999999999443    468899999997653 34556789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccce-----------------eee------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTR-----------------VRI------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~-----------------~~i------------------------------------  137 (253)
                      +++++|.+++.....  .+.....                 ..+                                    
T Consensus        81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~  158 (265)
T cd06605          81 MDGGSLDKILKEVQG--RIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT  158 (265)
T ss_pred             cCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence            999999998854211  0000000                 000                                    


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++||||||+++|++++|..||.............. .... ...     .+....   ..
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~-~~~-----~~~~~~---~~  228 (265)
T cd06605         159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL-QYIV-NEP-----PPRLPS---GK  228 (265)
T ss_pred             ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHH-HHHh-cCC-----CCCCCh---hh
Confidence                       11223467789999999999999999999865432211111111 1111 000     011111   11


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+.+++.+||..+|++|||+.+++.
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         229 FSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             cCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            4456788899999999999999999984

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.90  E-value=1.2e-23  Score=168.15  Aligned_cols=183  Identities=19%  Similarity=0.303  Sum_probs=129.1

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc------cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      +|+..+.||+|++|.++.    .+++.||+|.+....      ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            478889999999999554    578899999997432      1234678999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ++||+.+++|.+++.+...   +++.....+                                                 
T Consensus        81 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~  157 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGA---FKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK  157 (268)
T ss_pred             EEeccCCCcHHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence            9999999999988743211   111100000                                                 


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++|+||+|+++|++++|..||........  .... ..         ...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~-~~---------~~~  225 (268)
T cd06630         158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH--LALI-FK---------IAS  225 (268)
T ss_pred             cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch--HHHH-HH---------Hhc
Confidence                                 01123466789999999999999999999853322111  1111 00         000


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .......+......+.+++.+||..+|++||++.++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         226 ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            11112233345567888999999999999999999885

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.90  E-value=9.4e-24  Score=168.57  Aligned_cols=176  Identities=18%  Similarity=0.225  Sum_probs=119.7

Q ss_pred             CccccccccceEeeC----------------CCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           42 NKLGEGGFGPGKLLN----------------GEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        42 ~~ig~G~fg~~~~~~----------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      +.||+|+||.++...                ...+++|.+..........+..|+.+++.++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            468999999955431                2358899887655555667899999999999999999999999988999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCcccee-------------------------------------------ee-----
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRV-------------------------------------------RI-----  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~-------------------------------------------~i-----  137 (253)
                      ++|||+++|+|..++......  +.+....                                           .+     
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~  158 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDV--LTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI  158 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence            999999999998877431110  0110000                                           00     


Q ss_pred             --------------------ee-ecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 --------------------YA-LHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 --------------------~~-~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                          .. ....++.++|||||||++|||++ |..|+.......  ..     ... .... .  
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~-----~~~-~~~~-~--  227 (262)
T cd05077         159 PITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KE-----RFY-EGQC-M--  227 (262)
T ss_pred             CccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HH-----HHH-hcCc-c--
Confidence                                01 12446778999999999999985 666654321111  00     000 0000 0  


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                             ...+....+.+++.+||+.||.+||++.+|++.|+
T Consensus       228 -------~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         228 -------LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             -------CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence                   01112356788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.90  E-value=5.4e-24  Score=169.04  Aligned_cols=181  Identities=19%  Similarity=0.272  Sum_probs=128.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|+..+.||+|+||.++.    .+++.+|+|.+...  .....+.+.+|+.+++.++||||+++++.+..++..+++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            478889999999999543    57889999999754  334456799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.+++...... .+.+.....+                                                     
T Consensus        81 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~  159 (256)
T cd08220          81 APGGTLAEYIQKRCNS-LLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY  159 (256)
T ss_pred             CCCCCHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence            9999999888432111 1111111100                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++||||||+++|++++|..||......  ......    . ....         .....
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~----~-~~~~---------~~~~~  223 (256)
T cd08220         160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKI----M-SGTF---------APISD  223 (256)
T ss_pred             ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHH----H-hcCC---------CCCCC
Confidence                        112233567899999999999999999997643221  111111    0 0100         01111


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+.+++.+||..+|++|||+.++++
T Consensus       224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         224 RYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            23456788999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.90  E-value=7e-24  Score=174.32  Aligned_cols=174  Identities=18%  Similarity=0.191  Sum_probs=121.1

Q ss_pred             cCccccccccceEe-------eCCCEEEEEEeccc----ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           41 ENKLGEGGFGPGKL-------LNGEQVAVKRLSSQ----SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        41 ~~~ig~G~fg~~~~-------~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++.||+|+||.++.       ..++.||+|++...    .......+..|+.+++.++||||+++++.+..++..+++||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            36899999999654       35788999999753    12334567889999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccce------------------------------------eee----------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTR------------------------------------VRI----------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~------------------------------------~~i----------------  137 (253)
                      |+++|+|.+++.....   +.....                                    ..+                
T Consensus        81 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  157 (323)
T cd05584          81 YLSGGELFMHLEREGI---FMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVT  157 (323)
T ss_pred             CCCCchHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcc
Confidence            9999999887732211   000000                                    000                


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|||||||++|||++|..||......  ....    ... .+.          ...+
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--~~~~----~~~-~~~----------~~~~  220 (323)
T cd05584         158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--KTID----KIL-KGK----------LNLP  220 (323)
T ss_pred             cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--HHHH----HHH-cCC----------CCCC
Confidence                         122334678899999999999999999998643221  1111    111 110          0111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      ......+.+++.+||+.+|++||     +++++++
T Consensus       221 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         221 PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            12335677888999999999999     7888765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.90  E-value=2.8e-24  Score=172.06  Aligned_cols=181  Identities=29%  Similarity=0.413  Sum_probs=124.3

Q ss_pred             CccccccccceEeeC----------CCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           42 NKLGEGGFGPGKLLN----------GEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        42 ~~ig~G~fg~~~~~~----------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +.||+|+||.++...          +..+|+|.+... .......+.+|+.+++.++||||+++++++...+..+++|||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999965422          257899988654 234566789999999999999999999999988999999999


Q ss_pred             CCCCChhhhccCCCCc----CCCCccce-----------------------------------------eee--------
Q 043709          111 MPNKSLDYFLFDPANK----GRLGWGTR-----------------------------------------VRI--------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~----~~~~~~~~-----------------------------------------~~i--------  137 (253)
                      +++|+|.+++......    ..+.+...                                         ..+        
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            9999999887431100    00111000                                         000        


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                             ....+.++.++|||||||++|||++ |..||.....  ......+     ..+    
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~-----~~~----  229 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHV-----TAG----  229 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHH-----hcC----
Confidence                                   0122345678999999999999998 8888753221  1111111     000    


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                           .........+..+.+++.+||..+|.+||++++|++.|++
T Consensus       230 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         230 -----GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             -----CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence                 0111122345677889999999999999999999998864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.90  E-value=1.6e-23  Score=172.57  Aligned_cols=179  Identities=13%  Similarity=0.189  Sum_probs=121.5

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|+++..   .....+.+..|..++..+ +||||+++++++.+.+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4689999999654    46889999999754   233445688999999998 699999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.......+                                                        
T Consensus        81 g~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (329)
T cd05588          81 GDLMFHMQRQRK---LPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence            999877632110   111100000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC---cchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS---LTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                               ......++.++|+|||||++|||++|+.||.......   ....... .........          ..+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~----------~~p~  226 (329)
T cd05588         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYL-FQVILEKQI----------RIPR  226 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHH-HHHHHcCCC----------CCCC
Confidence                     1223457789999999999999999999986432221   1111111 111111100          1111


Q ss_pred             HHHHHHHHHhccccCCCCCCCCC------HHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPT------MLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs------~~~il~  234 (253)
                      .....+.+++.+||+.||.+||+      ++++++
T Consensus       227 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         227 SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            23456788999999999999997      567763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=8.5e-24  Score=169.07  Aligned_cols=179  Identities=21%  Similarity=0.283  Sum_probs=125.4

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccc---------cHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQ---------GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      .|.+.+.||+|++|.++.    .+++.+|+|.+......         ..+.+.+|+.++++++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            477889999999999544    46789999988654221         22568899999999999999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      .+++|||+++++|.+++.....   ++......+                                              
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGA---FEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccC---ccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence            9999999999999888843211   111100000                                              


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLW  192 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (253)
                                               ......++.++|+||+||++|+|++|..||......  ..   . .....     
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~---~-~~~~~-----  226 (267)
T cd06628         158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--QA---I-FKIGE-----  226 (267)
T ss_pred             cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--HH---H-HHHhc-----
Confidence                                     011233567899999999999999999998643211  00   0 00000     


Q ss_pred             ccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       .    .....+......+.+++.+||+.+|.+||++.+|++
T Consensus       227 -~----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         227 -N----ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             -c----CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence             0    111112234466788888999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.90  E-value=6.8e-24  Score=168.74  Aligned_cols=180  Identities=30%  Similarity=0.432  Sum_probs=127.1

Q ss_pred             CccccccccceEe----eC---CCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LN---GEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.++.    ..   +..|++|.+...... ..+.+.+|+.+++.++|+||+++++++......+++|||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4689999999443    22   778999999865333 367899999999999999999999999999999999999999


Q ss_pred             CChhhhccCCCC------cCCCCccceeee--------------------------------------------------
Q 043709          114 KSLDYFLFDPAN------KGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~------~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |+|.+++.....      ...+++.....+                                                  
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  160 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY  160 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence            999999865311      111222211111                                                  


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                       ......++.++||||+|+++|||++ |..||.....  ..+....     ..+         .
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~-----~~~---------~  224 (262)
T cd00192         161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYL-----RKG---------Y  224 (262)
T ss_pred             cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH-----HcC---------C
Confidence                             0112346778999999999999999 4777764421  1111111     111         1


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ....+...+..+.+++.+||..+|++|||+.++++.|+
T Consensus       225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         225 RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            11112223567888999999999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.90  E-value=1.4e-23  Score=169.09  Aligned_cols=178  Identities=16%  Similarity=0.174  Sum_probs=120.8

Q ss_pred             cccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      ||+|+||.+++    .+++.||+|.+....   ....+.+..|+.+++.++||||+++.+++...+.++++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            69999999654    468899999997532   22345678899999999999999999999999999999999999999


Q ss_pred             hhhccCCC-CcCCCCccceeee----------------------------------------------------------
Q 043709          117 DYFLFDPA-NKGRLGWGTRVRI----------------------------------------------------------  137 (253)
Q Consensus       117 ~~~l~~~~-~~~~~~~~~~~~i----------------------------------------------------------  137 (253)
                      ..++.... ....+++.....+                                                          
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence            87763211 1111111111111                                                          


Q ss_pred             -------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHH
Q 043709          138 -------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKR  210 (253)
Q Consensus       138 -------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (253)
                             ......++.++|||||||++|||++|..||.........  ... ...        .....  .......+..
T Consensus       161 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~-~~~--------~~~~~--~~~~~~~~~~  227 (280)
T cd05608         161 PGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KEL-KQR--------ILNDS--VTYPDKFSPA  227 (280)
T ss_pred             cCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHH-HHh--------hcccC--CCCcccCCHH
Confidence                   112345677899999999999999999998654322110  000 000        00000  0111234456


Q ss_pred             HHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          211 YSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       211 ~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      +.+++.+||+.||++||     +++++++
T Consensus       228 ~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         228 SKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            78888999999999999     6778774

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.90  E-value=3.8e-24  Score=171.43  Aligned_cols=190  Identities=21%  Similarity=0.273  Sum_probs=132.4

Q ss_pred             HhcCccccCccccccccceEee----C---CCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKLL----N---GEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~~----~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..++|.+.+.||+|+||.++..    .   ...||||...... ....+.+.+|+.+++.++||||+++++++.+ +..+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence            3456889999999999995541    1   3468999887653 4556789999999999999999999998875 5578


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++|||+++|+|.+++.....  .+.+.....+                                                
T Consensus        83 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          83 IVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            99999999999999843211  1111111110                                                


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++||||||+++||+++ |..||......  ......    . .+...      
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~----~-~~~~~------  227 (270)
T cd05056         161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--DVIGRI----E-NGERL------  227 (270)
T ss_pred             cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHH----H-cCCcC------
Confidence                              1122346678999999999999986 88887644321  111111    0 11000      


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                         ......+..+.+++.+||..+|++|||+.++++.|+++..+
T Consensus       228 ---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         228 ---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence               11122345788889999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.90  E-value=9.8e-24  Score=170.27  Aligned_cols=195  Identities=16%  Similarity=0.127  Sum_probs=126.2

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|++|.++.    .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            578889999999999554    46889999998754  233346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +. ++|.+++........+.......+                                                     
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT  159 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence            98 588777643221112222111111                                                     


Q ss_pred             ------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc-------C----CCccc
Q 043709          138 ------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN-------D----GSLWD  193 (253)
Q Consensus       138 ------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~  193 (253)
                                  .. ....++.++|||||||++|+|++|+.||....... ...... .....       .    .....
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  237 (285)
T cd07861         160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIF-RILGTPTEDVWPGVTSLPDYKN  237 (285)
T ss_pred             CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHH-HHhCCCChhhhhcchhhHHHHh
Confidence                        00 11235678999999999999999999886432211 000000 00000       0    00000


Q ss_pred             cccc---cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          194 LMDP---MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       194 ~~~~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....   ............++.+++.+||..||++|||+.+|++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            0000   0000011123456788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.90  E-value=6e-24  Score=170.18  Aligned_cols=187  Identities=19%  Similarity=0.283  Sum_probs=125.8

Q ss_pred             CccccCccccccccceEe----e-CCCEEEEEEeccc----------ccccHHHHHHHHHHHHh-ccCCCcceEeEEEEe
Q 043709           37 NFSMENKLGEGGFGPGKL----L-NGEQVAVKRLSSQ----------SGQGLEEFKNEMMLIAK-LQDINLVRIIGCCVE  100 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~-~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~nIv~~~~~~~~  100 (253)
                      +|++.+.||+|+||.++.    . .++.+|+|.+...          ......++..|+.++.+ ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            478889999999999543    2 4678999988632          22334567889988876 699999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCC-CcCCCCccce-----------------eee-------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPA-NKGRLGWGTR-----------------VRI-------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~-----------------~~i-------------------------  137 (253)
                      ++..+++|||+++++|.+++.... ....++....                 ..+                         
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            999999999999999988763210 0000110000                 000                         


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccc
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDL  194 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (253)
                                             ......++.++|+||||+++||+++|..||.....  .......     ....... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--~~~~~~~-----~~~~~~~-  232 (269)
T cd08528         161 AKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--LSLATKI-----VEAVYEP-  232 (269)
T ss_pred             eeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--HHHHHHH-----hhccCCc-
Confidence                                   11223467889999999999999999999753321  1111111     0111110 


Q ss_pred             ccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          195 MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                             .........+.+++.+||+.||++||++.++.+++++
T Consensus       233 -------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~  269 (269)
T cd08528         233 -------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD  269 (269)
T ss_pred             -------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence                   0111223567788889999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.90  E-value=6.5e-24  Score=174.14  Aligned_cols=173  Identities=18%  Similarity=0.167  Sum_probs=121.7

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++...   .......+..|..++..+ +||||+++++++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4689999999554    46789999999754   234456778899999888 699999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.+...   +++.....+                                                        
T Consensus        81 ~~L~~~~~~~~~---l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (318)
T cd05570          81 GDLMFHIQRSGR---FDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC  157 (318)
T ss_pred             CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee
Confidence            999887743211   111100000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|||||||++|+|++|..||.....  ......    .. ....          ..+....
T Consensus       158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~~~----i~-~~~~----------~~~~~~~  220 (318)
T cd05570         158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELFQS----IL-EDEV----------RYPRWLS  220 (318)
T ss_pred             cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHHHH----HH-cCCC----------CCCCcCC
Confidence                     12234577899999999999999999999864331  111111    11 1100          0111234


Q ss_pred             HHHHHHhccccCCCCCCCCCH-----HHHHH
Q 043709          209 KRYSNVDLFCFRENATDRPTM-----LEIVS  234 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~-----~~il~  234 (253)
                      ..+.+++.+||..||.+||++     .++++
T Consensus       221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             HHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            567889999999999999999     77764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.90  E-value=9.1e-24  Score=173.73  Aligned_cols=176  Identities=17%  Similarity=0.190  Sum_probs=121.0

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHH---HhccCCCcceEeEEEEecCeeEEE
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLI---AKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l---~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      |++.+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.++   +.++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            66789999999999554    46889999999754   233445677777665   456799999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+.+|+|..+++...    +.+.....+                                                  
T Consensus        81 ~E~~~~~~L~~~~~~~~----l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05589          81 MEYAAGGDLMMHIHTDV----FSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD  156 (324)
T ss_pred             EcCCCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence            99999999987763311    111100000                                                  


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ...+..++.++|||||||++|||++|..||......  .....+    .. ...          .
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--~~~~~i----~~-~~~----------~  219 (324)
T cd05589         157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--EVFDSI----VN-DEV----------R  219 (324)
T ss_pred             cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--HHHHHH----Hh-CCC----------C
Confidence                           122345778899999999999999999998643221  111111    10 000          0


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      .+...+..+.+++.+||..||.+||     ++.++++
T Consensus       220 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         220 YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            1112345677889999999999999     4666654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=7.6e-24  Score=176.88  Aligned_cols=86  Identities=22%  Similarity=0.367  Sum_probs=74.6

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||||++...   .......+.+|+.++..++||||+++++.+.+.+.+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            4789999999999999654    46889999999753   2334456889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhcc
Q 043709          109 EHMPNKSLDYFLF  121 (253)
Q Consensus       109 e~~~~g~L~~~l~  121 (253)
                      |||++|+|.+++.
T Consensus        81 E~~~~g~L~~~l~   93 (364)
T cd05599          81 EYLPGGDMMTLLM   93 (364)
T ss_pred             CCCCCcHHHHHHH
Confidence            9999999998874

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.90  E-value=9.5e-24  Score=170.19  Aligned_cols=192  Identities=16%  Similarity=0.213  Sum_probs=132.7

Q ss_pred             ccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEe
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVE  100 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~  100 (253)
                      .++.++..+.+.|++.+.||+|+||.+++    .+++.+|+|.+.... .....+..|+.+++.+ +||||+++++++..
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   84 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK   84 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence            46777778889999999999999999544    567899999986532 3345688899999998 69999999999853


Q ss_pred             ------cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------
Q 043709          101 ------KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------  137 (253)
Q Consensus       101 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------  137 (253)
                            .+..+++|||+++|+|.+++...... .+.......+                                     
T Consensus        85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~  163 (282)
T cd06636          85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN-ALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLV  163 (282)
T ss_pred             ccccCCCCEEEEEEEeCCCCcHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe
Confidence                  45789999999999999888432211 1111100000                                     


Q ss_pred             ----------------------------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh
Q 043709          138 ----------------------------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 ----------------------------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                  ..     ....++.++|+|||||++|||++|..||.........      ..
T Consensus       164 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~------~~  237 (282)
T cd06636         164 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL------FL  237 (282)
T ss_pred             eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh------hh
Confidence                                        00     0234667899999999999999999998643221100      00


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .         .............+..+.+++.+||+.||.+||++.+|++
T Consensus       238 ~---------~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         238 I---------PRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             H---------hhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            0         0000001111123457888999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.8e-23  Score=167.03  Aligned_cols=179  Identities=16%  Similarity=0.232  Sum_probs=126.9

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhcc---CCCcceEeEEEEecCeeEEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQ---DINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .|+..+.||+|+||.+++    .+++.||+|.+... .....+.+.+|+.+++.++   |||++++++++..++..+++|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            478889999999999544    56889999998754 3445677889999999986   999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++++|.++++...    +.+.....+                                                   
T Consensus        82 e~~~~~~L~~~~~~~~----l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06917          82 EYAEGGSVRTLMKAGP----IAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK  157 (277)
T ss_pred             ecCCCCcHHHHHHccC----CCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence            9999999998874321    111110000                                                   


Q ss_pred             --------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 --------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 --------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                    ... ...++.++|+||||+++|+|++|..||........     .  ......     ..+.+...
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~-----~--~~~~~~-----~~~~~~~~  225 (277)
T cd06917         158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA-----M--MLIPKS-----KPPRLEDN  225 (277)
T ss_pred             cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh-----h--hccccC-----CCCCCCcc
Confidence                          011 12357789999999999999999999864322110     0  000000     01111111


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         ..+..+.+++.+||..||++||++.+++.
T Consensus       226 ---~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         226 ---GYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             ---cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence               13456788889999999999999999985

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.90  E-value=3.1e-23  Score=166.04  Aligned_cols=184  Identities=23%  Similarity=0.309  Sum_probs=118.3

Q ss_pred             CccccccccceEee------CCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           42 NKLGEGGFGPGKLL------NGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        42 ~~ig~G~fg~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      +.||+|+||.+++.      ....+|+|.+.... ......+.+|+.+++.++||||+++++.+...+..+++|||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            36899999996542      23568888876442 333457889999999999999999999999999999999999999


Q ss_pred             ChhhhccCCCCcCC--CCccceeee-------------------------------------------------------
Q 043709          115 SLDYFLFDPANKGR--LGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       115 ~L~~~l~~~~~~~~--~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|.+++........  ..+.....+                                                       
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD  160 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence            99998854221100  000000000                                                       


Q ss_pred             ------------e-------eecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 ------------Y-------ALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 ------------~-------~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                  .       .....++.++|||||||++|||++ |..||.....  .....    .... ........+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--~~~~~----~~~~-~~~~~~~~~  233 (269)
T cd05042         161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD--EQVLK----QVVR-EQDIKLPKP  233 (269)
T ss_pred             CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHH----HHhh-ccCccCCCC
Confidence                        0       011234668999999999999999 5666643221  11111    1111 111112222


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ...    ......+..++..|| .||++|||+++|++.|.
T Consensus       234 ~~~----~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         234 QLD----LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             ccc----ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            221    223345566777798 59999999999999873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=1.6e-23  Score=168.01  Aligned_cols=184  Identities=20%  Similarity=0.290  Sum_probs=125.6

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc----------cccHHHHHHHHHHHHhccCCCcceEeEEEEecC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS----------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG  102 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~  102 (253)
                      +|...+.||.|+||.++.    .+++.+|+|.+....          ....+.+.+|+.+++.++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            477789999999999654    468899999886321          011346788999999999999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------  137 (253)
                      ..++||||+++|+|.++++...   .+.......+                                             
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence            9999999999999998874321   1111110000                                             


Q ss_pred             ----------------------eeec--CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 ----------------------YALH--GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 ----------------------~~~~--~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                            ....  ..++.++|+||||+++||+++|..||......     ... ....... .  
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~-~~~~~~~-~--  229 (272)
T cd06629         159 DDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-----AAM-FKLGNKR-S--  229 (272)
T ss_pred             cccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-----HHH-HHhhccc-c--
Confidence                                  0011  12677899999999999999999998532211     001 1111010 0  


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        ...........++..+.+++.+||..+|++||++++|++
T Consensus       230 --~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         230 --APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             --CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence              111111112234567888899999999999999999886

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-24  Score=181.76  Aligned_cols=187  Identities=18%  Similarity=0.299  Sum_probs=138.5

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +.+.|.++-.||.|+||++++    .++-..|.|++...+.+..+.++-|+.||..+.||+||++++.|...+.+||+.|
T Consensus        30 P~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliE  109 (1187)
T KOG0579|consen   30 PRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIE  109 (1187)
T ss_pred             HHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEe
Confidence            445688889999999999554    5666788999988888889999999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccC-----------------------------------------------------------------CC
Q 043709          110 HMPNKSLDYFLFD-----------------------------------------------------------------PA  124 (253)
Q Consensus       110 ~~~~g~L~~~l~~-----------------------------------------------------------------~~  124 (253)
                      ||.||-++.++-+                                                                 ..
T Consensus       110 FC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs  189 (1187)
T KOG0579|consen  110 FCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS  189 (1187)
T ss_pred             ecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence            9999999877611                                                                 00


Q ss_pred             CcCCCCccceeee---eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          125 NKGRLGWGTRVRI---YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       125 ~~~~~~~~~~~~i---~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                      ..+...|..+..+   .....+|++++||||||++|.||..+.+|.....+  +-.     .-.....+.+.++.|....
T Consensus       190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--MRV-----llKiaKSePPTLlqPS~Ws  262 (1187)
T KOG0579|consen  190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRV-----LLKIAKSEPPTLLQPSHWS  262 (1187)
T ss_pred             ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--HHH-----HHHHhhcCCCcccCcchhh
Confidence            1111222222211   34566899999999999999999999998642221  111     1122233444455444333


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                             ..+.+++.+||..||..||+++++++
T Consensus       263 -------~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  263 -------RSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             -------hHHHHHHHHHHhcCCccCCCHHHHhh
Confidence                   45667777799999999999999885

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.2e-23  Score=168.73  Aligned_cols=187  Identities=22%  Similarity=0.267  Sum_probs=127.2

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecC-----
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKG-----  102 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~-----  102 (253)
                      .++++|++.+.||+|++|.+++    .+++.+++|.+.... ...+.+.+|+.+++.+ .|+||+++++++....     
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~   81 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND   81 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence            3567899999999999999444    457889999987543 3346789999999999 6999999999997644     


Q ss_pred             -eeEEEEeeCCCCChhhhccCCC-CcCCCCccceeee-------------------------------------------
Q 043709          103 -VKILIYEHMPNKSLDYFLFDPA-NKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       103 -~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i-------------------------------------------  137 (253)
                       .++++|||+++++|.+++.... ....+.+.....+                                           
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~  161 (275)
T cd06608          82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA  161 (275)
T ss_pred             eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence             4899999999999988874311 0111111110000                                           


Q ss_pred             ----------------------e-----eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC
Q 043709          138 ----------------------Y-----ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS  190 (253)
Q Consensus       138 ----------------------~-----~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  190 (253)
                                            .     .....++.++|||||||++|++++|..||......  ......     ....
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~-----~~~~  234 (275)
T cd06608         162 QLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--RALFKI-----PRNP  234 (275)
T ss_pred             ecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH--HHHHHh-----hccC
Confidence                                  0     00123566899999999999999999998633211  111000     0000


Q ss_pred             ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          191 LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                           .+..  .........+.+++.+||..||++|||+.++++
T Consensus       235 -----~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         235 -----PPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             -----CCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence                 0011  111224457888999999999999999999985

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.89  E-value=3.7e-23  Score=170.43  Aligned_cols=174  Identities=11%  Similarity=0.175  Sum_probs=117.8

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++...   .....+.+..|+.++..+ +||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4689999999654    46789999999754   233445678899988877 799999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.......+                                                        
T Consensus        81 ~~L~~~~~~~~~---l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (329)
T cd05618          81 GDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc
Confidence            999877632211   010000000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC---cchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS---LTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                               ...+..++.++|||||||++|||++|..||.......   ....... ........          ...+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~-~~~i~~~~----------~~~p~  226 (329)
T cd05618         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQ----------IRIPR  226 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHH-HHHHhcCC----------CCCCC
Confidence                     1233456789999999999999999999986432211   1111111 11111110          01112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTM  229 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~  229 (253)
                      .....+.+++.+||..||++||++
T Consensus       227 ~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         227 SLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CCCHHHHHHHHHHhcCCHHHcCCC
Confidence            234567789999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.89  E-value=1.2e-23  Score=169.44  Aligned_cols=186  Identities=23%  Similarity=0.318  Sum_probs=129.1

Q ss_pred             cCccccCccccccccceEe----eCCC----EEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGE----QVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .+|++.+.||+|+||.+++    .++.    .||+|.+... .....+.+.+|+.+++.+.||||+++++++.. ...++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l   85 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL   85 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence            5788999999999999654    2444    4899998754 33445678999999999999999999999875 45789


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +++|+++|+|.++++....  .+++.....+                                                 
T Consensus        86 ~~~~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          86 VTQLMPYGCLLDYVRENKD--RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEEcCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence            9999999999998854211  1111111111                                                 


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++|||||||++||+++ |..||.....  ..+...+     .....       
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~-----~~~~~-------  229 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLL-----EKGER-------  229 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH-----HCCCc-------
Confidence                              1122346778999999999999998 7777653321  1111111     11110       


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                        .......+..+.+++.+||..||+.||++.++++.|+...
T Consensus       230 --~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         230 --LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             --CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence              0111123456778889999999999999999999998876

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.89  E-value=1.2e-23  Score=167.23  Aligned_cols=180  Identities=21%  Similarity=0.284  Sum_probs=126.6

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc-----cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-----GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      +|+..+.||+|++|.++.    .+++.|++|.+....     .+..+.+.+|+.+++.++||||+++++++..++..+++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            477789999999999544    368899999986532     23456789999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      +||+++++|.+++.+...   +.+.....+                                                  
T Consensus        81 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~  157 (258)
T cd06632          81 LELVPGGSLAKLLKKYGS---FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF  157 (258)
T ss_pred             EEecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccc
Confidence            999999999998843221   111110000                                                  


Q ss_pred             --------------eeecCc-cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 --------------YALHGV-FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 --------------~~~~~~-~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                    ...... ++.++|+||||+++|++++|..||.....  .....    ........         ..
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--~~~~~----~~~~~~~~---------~~  222 (258)
T cd06632         158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--VAAVF----KIGRSKEL---------PP  222 (258)
T ss_pred             ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--HHHHH----HHHhcccC---------CC
Confidence                          011122 67789999999999999999999864431  11110    00000111         11


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+......+.+++.+||+.+|++||++.+++.
T Consensus       223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            11223456778888999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.89  E-value=1.1e-24  Score=187.30  Aligned_cols=188  Identities=23%  Similarity=0.285  Sum_probs=139.2

Q ss_pred             ccccCccccccccceEe----eCC----CEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           38 FSMENKLGEGGFGPGKL----LNG----EQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ....+.||.|+||++++    ..+    -+||||++... ..+..++++.|+.+|..++|||+++++|+|..+. +.||+
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt  776 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT  776 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence            44558899999999554    333    46899999765 5666789999999999999999999999998765 88999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      +|++.|.|.++++..+..  +.....+.+                                                   
T Consensus       777 q~mP~G~LlDyvr~hr~~--igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e  854 (1177)
T KOG1025|consen  777 QLMPLGCLLDYVREHRDN--IGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE  854 (1177)
T ss_pred             HhcccchHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence            999999999998643211  111111111                                                   


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                      .+....|+.++|||||||++||++| |..|++....                .++...+...-+
T Consensus       855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~----------------~eI~dlle~geR  918 (1177)
T KOG1025|consen  855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA----------------EEIPDLLEKGER  918 (1177)
T ss_pred             ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH----------------HHhhHHHhcccc
Confidence                            3455679999999999999999987 4567654332                122233333333


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      -..+..+..++.-++++||..|+..||+++++.+.+....++..
T Consensus       919 LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq  962 (1177)
T KOG1025|consen  919 LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ  962 (1177)
T ss_pred             CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence            34445566778888999999999999999999999988886654

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.89  E-value=2.3e-23  Score=171.92  Aligned_cols=182  Identities=19%  Similarity=0.195  Sum_probs=124.9

Q ss_pred             CccccCccccccccceEe-------eCCCEEEEEEeccc----ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCee
Q 043709           37 NFSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQ----SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~  104 (253)
                      +|++.+.||+|+||.+++       .+++.||+|++...    .....+.+..|+.+++.+ .||||+++++++...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            588899999999999654       36789999999743    223345688899999999 599999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      +++|||+.+|+|.+++.....   +.......+                                               
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDN---FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence            999999999999888732211   010000000                                               


Q ss_pred             -------------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         .+. ...++.++|||||||++|||++|..||.........  ..+......       .++
T Consensus       158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--~~~~~~~~~-------~~~  228 (332)
T cd05614         158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQ--SEVSRRILK-------CDP  228 (332)
T ss_pred             cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCH--HHHHHHHhc-------CCC
Confidence                               011 123677899999999999999999998643322110  111011100       001


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                          .........+.+++.+||..||++||     +++++++
T Consensus       229 ----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         229 ----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence                11122345677888899999999999     6778774

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.89  E-value=7.4e-24  Score=183.00  Aligned_cols=188  Identities=18%  Similarity=0.182  Sum_probs=129.2

Q ss_pred             HHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC--
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG--  102 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~--  102 (253)
                      .....++|.+.+.||+|+||.+++    .+++.||||++...  +......+.+|+.++..++|+||+++++.+...+  
T Consensus        27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~  106 (496)
T PTZ00283         27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR  106 (496)
T ss_pred             ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence            334456899999999999999554    47899999999754  3445567889999999999999999988765332  


Q ss_pred             ------eeEEEEeeCCCCChhhhccCCCCc-CCCCccceeee--------------------------------------
Q 043709          103 ------VKILIYEHMPNKSLDYFLFDPANK-GRLGWGTRVRI--------------------------------------  137 (253)
Q Consensus       103 ------~~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~i--------------------------------------  137 (253)
                            .+++||||+++|+|.+++...... ..+.......+                                      
T Consensus       107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~D  186 (496)
T PTZ00283        107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGD  186 (496)
T ss_pred             CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEe
Confidence                  378999999999999887432111 01111000000                                      


Q ss_pred             -----------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 -----------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 -----------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                                   ......++.++|||||||++|||++|+.||.....  ..+..    ... .
T Consensus       187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--~~~~~----~~~-~  259 (496)
T PTZ00283        187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--EEVMH----KTL-A  259 (496)
T ss_pred             cccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--HHHHH----HHh-c
Confidence                                         11224577899999999999999999999864321  11111    111 1


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +..         ...+...+..+.+++.+||..+|.+||++.++++
T Consensus       260 ~~~---------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        260 GRY---------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             CCC---------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            111         0111233456888999999999999999999885

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.89  E-value=2.2e-23  Score=166.73  Aligned_cols=180  Identities=21%  Similarity=0.293  Sum_probs=120.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-----cccHHHHHHHHHHHHhccCCCcceEeEEEEe--cCee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-----GQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~  104 (253)
                      .+|+..+.||+|+||.+++    .++..||+|.+....     ....+.+.+|+.+++.++||||+++++++..  .+..
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            4789999999999999544    468899999986431     1234568899999999999999999998875  3578


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++++||+++++|.+++.....   +.+.....+                                               
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~  158 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGA---LTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT  158 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence            999999999999988743211   111000000                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++||||+||++||+++|..||.......     .. .......       
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-----~~-~~~~~~~-------  225 (266)
T cd06651         159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-----AI-FKIATQP-------  225 (266)
T ss_pred             ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-----HH-HHHhcCC-------
Confidence                                 1112335678999999999999999999986432111     01 0000000       


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        .....+......+..++ +||..+|++||++++|++
T Consensus       226 --~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         226 --TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             --CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence              01111222334455555 688899999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.89  E-value=3.7e-23  Score=167.12  Aligned_cols=185  Identities=16%  Similarity=0.185  Sum_probs=131.7

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..++.|+..+.||+|++|.++.    .++..+++|++..... ..+.+.+|+.+++.++|+||+++++.+...+..++++
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence            4567799999999999998443    3578899999976543 5677899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++++|.+++....  ..+++.....+                                                   
T Consensus        95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence            9999999999985432  01111111111                                                   


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ......++.++|+||||+++|++++|..||.......  .....    . ......       ...
T Consensus       173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~--~~~~~----~-~~~~~~-------~~~  238 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR--ALFLI----T-TKGIPP-------LKN  238 (286)
T ss_pred             hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH----H-hcCCCC-------Ccc
Confidence                          1112346778999999999999999999975332210  00000    0 011100       111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .......+.+++.+||+.+|.+||++.+|++
T Consensus       239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            1123456888999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.89  E-value=1.3e-23  Score=170.95  Aligned_cols=194  Identities=15%  Similarity=0.171  Sum_probs=127.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..+++|||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            5799999999999999554    46789999999754 233345678999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +. ++|.+++......  +.+.....+                                                     
T Consensus        86 ~~-~~l~~~l~~~~~~--~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  162 (301)
T cd07873          86 LD-KDLKQYLDDCGNS--INMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYS  162 (301)
T ss_pred             cc-cCHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCccc
Confidence            98 5887776432111  111000000                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCccccc-------
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLWDLM-------  195 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------  195 (253)
                                   ......++.++|||||||++|||++|..||......  ...........  ....+....       
T Consensus       163 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (301)
T cd07873         163 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEFKS  240 (301)
T ss_pred             ccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhccccccc
Confidence                         001123567899999999999999999998654321  11111100000  000000000       


Q ss_pred             --cccCCCC----CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 --DPMLQTE----ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 --~~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        .+.....    ........+.+++.+||..||.+|||++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence              0111000    11123456788999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.7e-23  Score=165.06  Aligned_cols=212  Identities=16%  Similarity=0.143  Sum_probs=141.6

Q ss_pred             HHhcCccccCccccccccce----EeeCCCEEEEEEecc--cccccHHHHHHHHHHHHhccCCCcceEeEEEEe-----c
Q 043709           33 AATDNFSMENKLGEGGFGPG----KLLNGEQVAVKRLSS--QSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-----K  101 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~----~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-----~  101 (253)
                      .....|...+.||+|+||.+    ...+|+.||||++..  ......++..+|+.+|+.++|+||+.+++.+..     -
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            34456777899999999984    447899999999984  355667889999999999999999999998865     2


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCc-------------------------------CC--CCccceeee-----------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANK-------------------------------GR--LGWGTRVRI-----------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~-------------------------------~~--~~~~~~~~i-----------  137 (253)
                      +.+|+|+|++. -||.++++.....                               ..  ++..+.+.+           
T Consensus        99 ~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen   99 NDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK  177 (359)
T ss_pred             ceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence            56999999996 4888887443200                               00  000000000           


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC-cchhhhh-------hHhhhcC
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS-LTLLGYV-------IWNLWND  188 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~-~~~~~~~-------~~~~~~~  188 (253)
                                           ......|+.++||||.|||+.||++|++-|.+..... ..++-..       .......
T Consensus       178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s  257 (359)
T KOG0660|consen  178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS  257 (359)
T ss_pred             cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence                                 2344569999999999999999999999887665431 1111110       0000000


Q ss_pred             C-------CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcccCCCCC
Q 043709          189 G-------SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEIVNLPYP  246 (253)
Q Consensus       189 ~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~~~~~~~  246 (253)
                      .       +.+......+. .........+++|+.++|..||.+|+|++|.+  -.|....+.-..|
T Consensus       258 ~~ar~yi~slp~~p~~~f~-~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP  323 (359)
T KOG0660|consen  258 EKARPYIKSLPQIPKQPFS-SIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP  323 (359)
T ss_pred             HHHHHHHHhCCCCCCCCHH-HHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence            0       01111111111 11123456789999999999999999999998  4577777777777

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.89  E-value=1.5e-23  Score=172.25  Aligned_cols=173  Identities=17%  Similarity=0.157  Sum_probs=120.4

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++...   .....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4689999999654    45789999999754   234456678899998876 799999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.+.....+                                                        
T Consensus        81 ~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05591          81 GDLMFQIQRSRK---FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC  157 (321)
T ss_pred             CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence            999877632211   111000000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|||||||++|||++|..||.....  ......+    ....    ..       .+....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--~~~~~~i----~~~~----~~-------~p~~~~  220 (321)
T cd05591         158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--DDLFESI----LHDD----VL-------YPVWLS  220 (321)
T ss_pred             cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--HHHHHHH----HcCC----CC-------CCCCCC
Confidence                     12234578899999999999999999999864432  1111111    1110    00       011123


Q ss_pred             HHHHHHhccccCCCCCCCC-------CHHHHHH
Q 043709          209 KRYSNVDLFCFRENATDRP-------TMLEIVS  234 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RP-------s~~~il~  234 (253)
                      ..+.+++.+||+.||++||       +++++++
T Consensus       221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            5677888899999999999       7777774

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.89  E-value=2.4e-23  Score=168.55  Aligned_cols=195  Identities=19%  Similarity=0.239  Sum_probs=122.0

Q ss_pred             cCccccCccccccccceEee-----CCCEEEEEEecccc--cccHHHHHHHHHHHHhc---cCCCcceEeEEEEe-----
Q 043709           36 DNFSMENKLGEGGFGPGKLL-----NGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKL---QDINLVRIIGCCVE-----  100 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~-----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~~~~~~~~-----  100 (253)
                      ++|++.+.||+|+||.+++.     .+..||+|.+....  ......+.+|+.+++.+   .||||+++++++..     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            36899999999999996652     35789999987542  23345667788877766   69999999999852     


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      ...++++|||+. ++|.+++...... .+++.....+                                           
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  158 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence            356899999997 5888777432111 1111111100                                           


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCccc-
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLWD-  193 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~-  193 (253)
                                           ......++.++|||||||++|||++|..||......  .....+.....  ....... 
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~--~~~~~i~~~~~~~~~~~~~~~  236 (290)
T cd07862         159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQLGKILDVIGLPGEEDWPRD  236 (290)
T ss_pred             eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHHhCCCChhhchhh
Confidence                                 112345778899999999999999999998654321  11111111100  0000000 


Q ss_pred             --cccccCC---C----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          194 --LMDPMLQ---T----EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       194 --~~~~~~~---~----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        .....+.   .    .........+.+++.+||+.||++|||+.++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence              0000000   0    001123456778999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.89  E-value=9.9e-24  Score=172.37  Aligned_cols=200  Identities=15%  Similarity=0.126  Sum_probs=130.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|.+.+.||+|+||.+++    .+++.||+|.++... ......+.+|+.+++.++||||+++++++..++..+++|||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            5699999999999999654    467889999997542 33345678999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +.+ +|.+++......  +.......+                                                     
T Consensus        86 ~~~-~l~~~~~~~~~~--~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  162 (309)
T cd07872          86 LDK-DLKQYMDDCGNI--MSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYS  162 (309)
T ss_pred             CCC-CHHHHHHhcCCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCccccc
Confidence            985 777766321110  000000000                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCccc---------
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLWD---------  193 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~---------  193 (253)
                                   ......++.++|||||||++|||++|..||.......  ..........  .......         
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (309)
T cd07872         163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED--ELHLIFRLLGTPTEETWPGISSNDEFKN  240 (309)
T ss_pred             cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCCHHHHhhhcchhhhhh
Confidence                         0112346788999999999999999999986543321  1111100000  0000000         


Q ss_pred             cccccCCC----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          194 LMDPMLQT----EASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       194 ~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ...+....    .........+.+++.+||..||.+|||++++++  .++...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         241 YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            00000000    011123456788999999999999999999995  555544

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.89  E-value=8.5e-24  Score=170.72  Aligned_cols=194  Identities=19%  Similarity=0.237  Sum_probs=126.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++.+.||+|+||.++.    .+++.||+|.+....  ....+.+.+|+.+++.++||||+++++++..++..++++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            4688999999999999544    357899999986542  2234568899999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+.+++|..+......   +.+.....+                                                    
T Consensus        81 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07846          81 FVDHTVLDDLEKYPNG---LDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY  157 (286)
T ss_pred             cCCccHHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence            9999888876532110   111110000                                                    


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh----------hcCCCc-c
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL----------WNDGSL-W  192 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~-~  192 (253)
                                    ......++.++||||||+++|||++|..||.....  ...........          ...... .
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07846         158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD--IDQLYHIIKCLGNLIPRHQEIFQKNPLFA  235 (286)
T ss_pred             CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence                          00112356789999999999999999988753321  11111100000          000000 0


Q ss_pred             ccccccCCC-----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 DLMDPMLQT-----EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+....     ......+..+.+++.+||..+|++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            000000000     001133567888999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.89  E-value=7.2e-24  Score=174.77  Aligned_cols=183  Identities=14%  Similarity=0.184  Sum_probs=127.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|+++..   .....+.+..|+.+++.+.||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            4789999999999999654    56889999999754   2334567889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++.....  .+.......+                                                   
T Consensus        81 e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~  158 (330)
T cd05601          81 EYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV  158 (330)
T ss_pred             CCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence            99999999998854211  0111100000                                                   


Q ss_pred             ---------------eee------cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------YAL------HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------~~~------~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                     ...      ...++.++|||||||++|||++|..||.......  ..    ............. 
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~--~~----~~i~~~~~~~~~~-  231 (330)
T cd05601         159 NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK--TY----NNIMNFQRFLKFP-  231 (330)
T ss_pred             eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH--HH----HHHHcCCCccCCC-
Confidence                           000      2346688999999999999999999986433211  11    1111111111111 


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                            ........+.+++.+||. +|.+||+++++++
T Consensus       232 ------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         232 ------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             ------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence                  111234567778888997 9999999999884

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.89  E-value=5.2e-23  Score=167.20  Aligned_cols=205  Identities=18%  Similarity=0.122  Sum_probs=131.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccccc-----ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG-----QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      +|++.+.||+|++|.+++    .+++.||||.+.....     .....+..|+.+++.++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            477889999999999554    4678999999975422     2234577899999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+ +|+|.+++....  ..+.+.....+                                                  
T Consensus        81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~  157 (298)
T cd07841          81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR  157 (298)
T ss_pred             Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence            9999 899999985432  11222211111                                                  


Q ss_pred             ---------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc--------CCCccc
Q 043709          138 ---------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN--------DGSLWD  193 (253)
Q Consensus       138 ---------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  193 (253)
                                     .. ....++.++|+|||||++||+++|..+|..... . ............        ......
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (298)
T cd07841         158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSD-I-DQLGKIFEALGTPTEENWPGVTSLPD  235 (298)
T ss_pred             cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCcc-H-HHHHHHHHHcCCCchhhhhhcccccc
Confidence                           00 112356789999999999999999766543221 1 111111000000        000000


Q ss_pred             cccccCC-----CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCC
Q 043709          194 LMDPMLQ-----TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQ  248 (253)
Q Consensus       194 ~~~~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~  248 (253)
                      .......     ..........+.+++.+||..+|++|||+.++++  .....+.+.|..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~--~~~~~~~~~~~~  293 (298)
T cd07841         236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE--HPYFSNDPAPTP  293 (298)
T ss_pred             cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh--CccccCCCCCCC
Confidence            0000000     0111223467888999999999999999999997  444444444433

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.89  E-value=5e-23  Score=173.04  Aligned_cols=85  Identities=21%  Similarity=0.264  Sum_probs=73.8

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .|+.++.||+|+||.+++    .+++.||+|++....   ....+.+.+|+.+++.++||||+++++.+.+.+.+++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            588999999999999655    468899999997542   3345678899999999999999999999999999999999


Q ss_pred             eCCCCChhhhcc
Q 043709          110 HMPNKSLDYFLF  121 (253)
Q Consensus       110 ~~~~g~L~~~l~  121 (253)
                      ||++|+|.+++.
T Consensus        82 ~~~gg~L~~~l~   93 (382)
T cd05625          82 YIPGGDMMSLLI   93 (382)
T ss_pred             CCCCCcHHHHHH
Confidence            999999988873

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.89  E-value=8.5e-24  Score=162.71  Aligned_cols=171  Identities=19%  Similarity=0.204  Sum_probs=125.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++++.||.|+||++.+    .++..+|+|++++.   .-..++...+|.++|+.+.||+++++++.+.+.+.++|||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            4688889999999999544    67889999999865   2344566789999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||++||.|.+++++..+.   +.......                                                   
T Consensus       124 eyv~GGElFS~Lrk~~rF---~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~T  200 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGRF---SEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWT  200 (355)
T ss_pred             eccCCccHHHHHHhcCCC---CchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEE
Confidence            999999999999652221   11111000                                                   


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 .+....|+.++|-||||+++|||+.|.+||....+  ..+...+     ..+        .+  .++.-
T Consensus       201 lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--~~iY~KI-----~~~--------~v--~fP~~  263 (355)
T KOG0616|consen  201 LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--IQIYEKI-----LEG--------KV--KFPSY  263 (355)
T ss_pred             ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--HHHHHHH-----HhC--------cc--cCCcc
Confidence                       45667799999999999999999999999875554  2221111     111        11  12223


Q ss_pred             HHHHHHHHhccccCCCCCCC
Q 043709          207 ILKRYSNVDLFCFRENATDR  226 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~R  226 (253)
                      ....+.+|+...++.|-.+|
T Consensus       264 fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  264 FSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             cCHHHHHHHHHHHhhhhHhh
Confidence            33456667777888887777

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.89  E-value=2.7e-23  Score=167.93  Aligned_cols=183  Identities=18%  Similarity=0.219  Sum_probs=125.4

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      |+..+.||+|+||.+++    .+++.||+|.+....   ......+.+|+.+++.++|+||+.+++.+.+.+.++++|||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            67778999999999544    568899999987542   22234578899999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++...... .+.......+                                                     
T Consensus        82 ~~g~~L~~~l~~~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05630          82 MNGGDLKFHIYHMGEA-GFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG  160 (285)
T ss_pred             cCCCcHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence            9999998887432111 1111100000                                                     


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ...+..++.++||||+|+++|+|++|..||.........  ... .....  ..    .    ......
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~--~~~-~~~~~--~~----~----~~~~~~  227 (285)
T cd05630         161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR--EEV-ERLVK--EV----Q----EEYSEK  227 (285)
T ss_pred             CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH--HHH-Hhhhh--hh----h----hhcCcc
Confidence                       112344677899999999999999999998754321100  000 00000  00    0    011112


Q ss_pred             HHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      ....+.+++.+||+.||++|||     ++++++
T Consensus       228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            3346778888899999999999     888885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=1.3e-23  Score=170.84  Aligned_cols=184  Identities=18%  Similarity=0.255  Sum_probs=128.2

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccc--------------cccHHHHHHHHHHHHhccCCCcceE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--------------GQGLEEFKNEMMLIAKLQDINLVRI   94 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--------------~~~~~~~~~E~~~l~~l~H~nIv~~   94 (253)
                      +.-++|++++.||+|+||++.+    .+++.||||++.+..              ....+...+|+.+|++++|||||++
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L  173 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL  173 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence            4457899999999999999554    578999999996421              1123678999999999999999999


Q ss_pred             eEEEEec--CeeEEEEeeCCCCChhhhccCCCCcCCCCccce------------------------------------ee
Q 043709           95 IGCCVEK--GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTR------------------------------------VR  136 (253)
Q Consensus        95 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------------------------------------~~  136 (253)
                      +.+..+.  +.+|||+|||..|.+...-....   .+...+.                                    +.
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d~~---els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK  250 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP---ELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK  250 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCccccCCCCcc---cccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence            9998764  67999999999998855431100   0000000                                    00


Q ss_pred             e----------------------------------eeec----CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchh
Q 043709          137 I----------------------------------YALH----GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL  178 (253)
Q Consensus       137 i----------------------------------~~~~----~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~  178 (253)
                      |                                  .+..    -.-+.+.||||+||+||.++.|+-||.....  .++.
T Consensus       251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--~~l~  328 (576)
T KOG0585|consen  251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--LELF  328 (576)
T ss_pred             eeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--HHHH
Confidence            0                                  1111    1134678999999999999999999874322  1111


Q ss_pred             hhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          179 GYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .             .++...+......+....+.+|+.++|..||+.|.+..+|..
T Consensus       329 ~-------------KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~  371 (576)
T KOG0585|consen  329 D-------------KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL  371 (576)
T ss_pred             H-------------HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence            1             122223333333356678889999999999999999998764

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.89  E-value=7.2e-23  Score=163.97  Aligned_cols=184  Identities=24%  Similarity=0.310  Sum_probs=117.3

Q ss_pred             CccccccccceEee---C---CCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           42 NKLGEGGFGPGKLL---N---GEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        42 ~~ig~G~fg~~~~~---~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      +.||+|+||.+++.   +   ...+++|.+... .....+.+.+|+.+++.++||||+++++.+......+++|||+++|
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            36899999996542   2   234567766543 2344578999999999999999999999999999999999999999


Q ss_pred             ChhhhccCCCCc-CCCCccceee----e----------------------------------------------------
Q 043709          115 SLDYFLFDPANK-GRLGWGTRVR----I----------------------------------------------------  137 (253)
Q Consensus       115 ~L~~~l~~~~~~-~~~~~~~~~~----i----------------------------------------------------  137 (253)
                      +|.++++..... ..........    +                                                    
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  160 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD  160 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence            999888532111 0000000000    0                                                    


Q ss_pred             -----------ee-------ecCccccccceeehhHHHHHHHhCC-CCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -----------YA-------LHGVFSIKSDVFSFGVLLLETLSSK-KNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -----------~~-------~~~~~~~~~DiwSlG~~l~ell~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                 ..       ....++.++|||||||++|||+++. .||....  ........    . .+......++.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~--~~~~~~~~----~-~~~~~~~~~~~  233 (268)
T cd05086         161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS--DREVLNHV----I-KDQQVKLFKPQ  233 (268)
T ss_pred             CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHH----H-hhcccccCCCc
Confidence                       00       0112356899999999999999764 4553221  11111111    1 11122223333


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ....    ....+.+++..|| .+|++||++++|++.|-
T Consensus       234 ~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         234 LELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             cCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            3222    3345667777899 67999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.89  E-value=7.7e-24  Score=174.23  Aligned_cols=173  Identities=14%  Similarity=0.139  Sum_probs=121.9

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      +.||+|+||.+++    .++..||+|++...   .......+..|+.+++.++||||+++++++...+.+++||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4689999999654    57889999999753   2334567788999999999999999999999999999999999999


Q ss_pred             ChhhhccCCCCcCCCCccce-------------------------------------eee--------------------
Q 043709          115 SLDYFLFDPANKGRLGWGTR-------------------------------------VRI--------------------  137 (253)
Q Consensus       115 ~L~~~l~~~~~~~~~~~~~~-------------------------------------~~i--------------------  137 (253)
                      +|..++.....   +.+...                                     ..+                    
T Consensus        81 ~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (325)
T cd05594          81 ELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC  157 (325)
T ss_pred             cHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccccc
Confidence            99877632210   000000                                     000                    


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|||||||++|||++|..||......  .....+     .....          ..+....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i-----~~~~~----------~~p~~~~  220 (325)
T cd05594         158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELI-----LMEEI----------RFPRTLS  220 (325)
T ss_pred             CCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHHH-----hcCCC----------CCCCCCC
Confidence                     122345788999999999999999999998643221  111111     00000          0111234


Q ss_pred             HHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          209 KRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      ..+.+++.+||+.||++|+     ++.++++
T Consensus       221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            5677888899999999996     8999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.89  E-value=2.5e-23  Score=174.55  Aligned_cols=86  Identities=19%  Similarity=0.230  Sum_probs=74.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++++.||+|+||.+++    .+++.||||++...   .....+.+.+|+.+++.++||||+++++.+.+.+.+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            4689999999999999654    56889999999753   2234567889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhcc
Q 043709          109 EHMPNKSLDYFLF  121 (253)
Q Consensus       109 e~~~~g~L~~~l~  121 (253)
                      |||++|+|.+++.
T Consensus        81 E~~~~g~L~~~i~   93 (376)
T cd05598          81 DYIPGGDMMSLLI   93 (376)
T ss_pred             eCCCCCcHHHHHH
Confidence            9999999998873

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.89  E-value=1.8e-23  Score=171.89  Aligned_cols=173  Identities=18%  Similarity=0.175  Sum_probs=120.9

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccC-CCcceEeEEEEecCeeEEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQD-INLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H-~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +|++.+.||+|+||.+++    .+++.||+|++...   .....+.+..|..++..+.| ++|+++++++...+.+++||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            588899999999999655    45778999999753   23455678899999999965 56888999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceee------------------------------------e---------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I---------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i---------------  137 (253)
                      ||+++|+|.+++.....   +.+.....                                    +               
T Consensus        81 E~~~~g~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05587          81 EYVNGGDLMYHIQQVGK---FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT  157 (324)
T ss_pred             cCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence            99999999887732211   00000000                                    0               


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ......++.++||||+||++|||++|..||.....  ......+    . ...          ...
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~i----~-~~~----------~~~  220 (324)
T cd05587         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DELFQSI----M-EHN----------VSY  220 (324)
T ss_pred             eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-cCC----------CCC
Confidence                          12234577899999999999999999999864332  1111111    1 000          011


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTM  229 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~  229 (253)
                      +......+.+++.+||..||.+|++.
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         221 PKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            12234567788889999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.89  E-value=2.6e-23  Score=170.40  Aligned_cols=173  Identities=18%  Similarity=0.185  Sum_probs=119.5

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||||+++..   .....+....|..+++.+ +||||+++++++.+.+.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4689999999554    45789999999754   234455677888888865 899999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.+.....+                                                        
T Consensus        81 g~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05619          81 GDLMFHIQSCHK---FDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC  157 (316)
T ss_pred             CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence            999888743211   000000000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++||||+||++|||++|..||.....  ..+...+    . ..      .+..    +....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i----~-~~------~~~~----~~~~~  220 (316)
T cd05619         158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSI----R-MD------NPCY----PRWLT  220 (316)
T ss_pred             CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-hC------CCCC----CccCC
Confidence                     12234578899999999999999999999864332  1111111    0 00      0111    11133


Q ss_pred             HHHHHHhccccCCCCCCCCCHH-HHHH
Q 043709          209 KRYSNVDLFCFRENATDRPTML-EIVS  234 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~-~il~  234 (253)
                      ..+.+++.+||+.||++||++. ++++
T Consensus       221 ~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         221 REAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             HHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            4677888899999999999996 6653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.89  E-value=1.3e-23  Score=189.09  Aligned_cols=192  Identities=20%  Similarity=0.221  Sum_probs=130.3

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec--Ce
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GV  103 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~  103 (253)
                      ....++|.+++.||+|+||.+++    .++..+|+|.+...  .......+..|+.+++.++|||||++++++...  ..
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~   88 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK   88 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence            34456899999999999999665    46788999998754  334456789999999999999999999988654  56


Q ss_pred             eEEEEeeCCCCChhhhccCCCC-cCCCCcc--------------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPAN-KGRLGWG--------------------------------------------------  132 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~--------------------------------------------------  132 (253)
                      +||||||+.+|+|.++|..... ...+++.                                                  
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            8999999999999877632000 0000000                                                  


Q ss_pred             ----------ceeee----------------------------ee--ecCccccccceeehhHHHHHHHhCCCCcCcCCC
Q 043709          133 ----------TRVRI----------------------------YA--LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNT  172 (253)
Q Consensus       133 ----------~~~~i----------------------------~~--~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~  172 (253)
                                ..+.+                            .+  ....++.++|||||||++|||++|..||.....
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~  248 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN  248 (1021)
T ss_pred             cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence                      00001                            01  123467899999999999999999999864322


Q ss_pred             CCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhc
Q 043709          173 NSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNE  239 (253)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~  239 (253)
                      . ..+.    .... ..  .     .+.   ....+..+.+|+..||..+|.+||++.+++  ..+..+
T Consensus       249 ~-~qli----~~lk-~~--p-----~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        249 F-SQLI----SELK-RG--P-----DLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             H-HHHH----HHHh-cC--C-----CCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            1 1111    1110 11  0     000   011235678889999999999999999998  455544

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.89  E-value=2.1e-23  Score=165.86  Aligned_cols=181  Identities=19%  Similarity=0.269  Sum_probs=125.8

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe-cCeeEEEEe
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-KGVKILIYE  109 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-~~~~~lv~e  109 (253)
                      +|++.+.||+|++|.++.    .+++.+|+|.+...  .....+.+.+|+.+++.++|||++++++.+.. ++.++++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            588999999999999543    45788999999754  23445678999999999999999999998764 456899999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++++|.+++..... ..+++.....+                                                    
T Consensus        81 ~~~~~~l~~~l~~~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~  159 (257)
T cd08223          81 FCEGGDLYHKLKEQKG-KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA  159 (257)
T ss_pred             ccCCCcHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence            9999999988743211 11111111110                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|+||||+++|++++|+.||.......  ..    .... .+..         ....
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--~~----~~~~-~~~~---------~~~~  223 (257)
T cd08223         160 STLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS--LV----YRII-EGKL---------PPMP  223 (257)
T ss_pred             ccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH--HH----HHHH-hcCC---------CCCc
Confidence                         1112335678999999999999999999876332111  10    1111 1111         1112


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+.+++.+||+.+|++||++.+++.
T Consensus       224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         224 KDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            234467888999999999999999999885

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.89  E-value=2.9e-23  Score=166.51  Aligned_cols=186  Identities=24%  Similarity=0.366  Sum_probs=124.3

Q ss_pred             ccccCccccccccceEe-------eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC------
Q 043709           38 FSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG------  102 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~------  102 (253)
                      |.+.+.||+|+||.++.       .++..||||.+...  .....+.+.+|+.+++.++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            56778999999999553       24678999999754  3344567899999999999999999999886532      


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCc---CCCCccceeee------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANK---GRLGWGTRVRI------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~i------------------------------------------  137 (253)
                      ..+++++|+.+|+|..++......   ..+++.....+                                          
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence            357889999999998776321100   00111100000                                          


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                               ......++.++|||||||++|||++ |..||.....  ..+...+    . ....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~----~-~~~~  233 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYL----I-KGNR  233 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHH----H-cCCc
Confidence                                     0112234678999999999999999 6676643321  1111111    1 1100


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                        .       ......+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       234 --~-------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         234 --L-------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             --C-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence              0       01112345788899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.89  E-value=3.8e-23  Score=166.87  Aligned_cols=194  Identities=19%  Similarity=0.196  Sum_probs=127.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|+..+.||+|+||.+++    .+++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+..+++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            3688999999999999544    368899999986432  2334568899999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++++|..++....   .+.+.....+                                                    
T Consensus        81 ~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07847          81 YCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY  157 (286)
T ss_pred             ccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence            999998887763211   1111111100                                                    


Q ss_pred             -------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh----------hcCCCcc-
Q 043709          138 -------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL----------WNDGSLW-  192 (253)
Q Consensus       138 -------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~-  192 (253)
                                   .. ....++.++||||||+++|||++|..||........  ........          ....... 
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07847         158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ--LYLIRKTLGDLIPRHQQIFSTNQFFK  235 (286)
T ss_pred             cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHHHhCCCChHHhhhcccccccc
Confidence                         01 113467789999999999999999999864432211  10000000          0000000 


Q ss_pred             ccccccCCCCC-----CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 DLMDPMLQTEA-----SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ~~~~~~~~~~~-----~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+......     .......+.+++.+||+.+|++||++.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            00000000000     0123456888999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.89  E-value=3.4e-23  Score=168.93  Aligned_cols=186  Identities=14%  Similarity=0.133  Sum_probs=128.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|.+....   ....+.+.+|+.+++.++||||+++++.+...+.++++|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            3688999999999999554    567899999987542   234567889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++.+...   +.+.....+                                                   
T Consensus        81 e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~  157 (305)
T cd05609          81 EYVEGGDCATLLKNIGA---LPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT  157 (305)
T ss_pred             ecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence            99999999988743211   111000000                                                   


Q ss_pred             -----------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 -----------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 -----------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                                   ......++.++|+|||||++||+++|..||.....  ..+....    . .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--~~~~~~~----~-~  230 (305)
T cd05609         158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--EELFGQV----I-S  230 (305)
T ss_pred             cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-h
Confidence                                         11223567789999999999999999999864321  1111111    0 0


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ..   ...+.    .....+..+.+++.+||+.+|++||++..+.++|+.
T Consensus       231 ~~---~~~~~----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         231 DD---IEWPE----GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             cc---cCCCC----ccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            00   00011    011234567889999999999999997666655554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.89  E-value=9.9e-23  Score=162.45  Aligned_cols=182  Identities=18%  Similarity=0.241  Sum_probs=129.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccccc-ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|++|.+++    .+++.|++|++..... ...+.+.+|+.++..++|+||+++++++...+.+++++||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            3688999999999998443    4688999999976533 4567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccce-----------------eee------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTR-----------------VRI------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~-----------------~~i------------------------------------  137 (253)
                      +++++|.+++.....   +.....                 ..+                                    
T Consensus        81 ~~~~~L~~~l~~~~~---l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~  157 (264)
T cd06623          81 MDGGSLADLLKKVGK---IPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC  157 (264)
T ss_pred             cCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence            999999998843110   000000                 000                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC-CcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN-SLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++|+||||+++|++++|..||...... ........    . ....     +    ..
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~----~-~~~~-----~----~~  223 (264)
T cd06623         158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI----C-DGPP-----P----SL  223 (264)
T ss_pred             cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH----h-cCCC-----C----CC
Confidence                         111223566899999999999999999998655421 11111111    1 1111     1    11


Q ss_pred             CHH-HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          204 SYP-ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       204 ~~~-~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ... .+..+.+++.+||..+|++||++.++++
T Consensus       224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             CcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            111 4467888888899999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.89  E-value=1.2e-22  Score=162.05  Aligned_cols=182  Identities=23%  Similarity=0.292  Sum_probs=127.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccccc--ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG--QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|+||.++.    .++..||+|.+.....  ...+.+..|+.+++.++|+||+++++.+...+..++++||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            478889999999999544    3688999999976533  3567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++++|.+++.....   ..+.....+                                                     
T Consensus        81 ~~~~~L~~~~~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~  157 (264)
T cd06626          81 CSGGTLEELLEHGRI---LDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG  157 (264)
T ss_pred             CCCCcHHHHHhhcCC---CChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence            999999998854211   111110000                                                     


Q ss_pred             ----------------eeecC---ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ----------------YALHG---VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ----------------~~~~~---~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                      .....   .++.++||||||+++|++++|..||....... ......     .....     +.
T Consensus       158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~-----~~~~~-----~~  226 (264)
T cd06626         158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHV-----GAGHK-----PP  226 (264)
T ss_pred             ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHH-----hcCCC-----CC
Confidence                            00111   26678999999999999999999986443211 111000     00110     11


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...  .......+.+++.+||+.+|++||++.+++.
T Consensus       227 ~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         227 IPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             CCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            111  1122456678888999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.89  E-value=2.1e-23  Score=168.97  Aligned_cols=194  Identities=19%  Similarity=0.233  Sum_probs=130.9

Q ss_pred             ccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEe
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVE  100 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~  100 (253)
                      +...++..+.++|++.+.||+|+||.+++    .+++.+|+|.+.... ...+.+.+|+.++..+ +||||+++++++..
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            45566777788999999999999999554    568899999986532 2345678899999998 79999999999875


Q ss_pred             c-----CeeEEEEeeCCCCChhhhccCCC-CcCCCCccceeee-------------------------------------
Q 043709          101 K-----GVKILIYEHMPNKSLDYFLFDPA-NKGRLGWGTRVRI-------------------------------------  137 (253)
Q Consensus       101 ~-----~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i-------------------------------------  137 (253)
                      .     +..+++|||+++|+|.++++... ....+.+.....+                                     
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~  170 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLV  170 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEe
Confidence            3     35899999999999988764210 0001111110000                                     


Q ss_pred             ----------------------------eee-----cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh
Q 043709          138 ----------------------------YAL-----HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 ----------------------------~~~-----~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                  ...     ...++.++|||||||++|||++|+.||.......  ....+   
T Consensus       171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~--~~~~~---  245 (291)
T cd06639         171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK--TLFKI---  245 (291)
T ss_pred             ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH--HHHHH---
Confidence                                        000     0125678999999999999999999986432210  00000   


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        .........       ........+.+++.+||+.+|++||++.++++
T Consensus       246 --~~~~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         246 --PRNPPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             --hcCCCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence              001111111       11123346888999999999999999999986

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.89  E-value=2.8e-23  Score=173.92  Aligned_cols=190  Identities=13%  Similarity=0.112  Sum_probs=124.0

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC-----eeE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-----VKI  105 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-----~~~  105 (253)
                      +|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+     ..+
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            578899999999999654    46889999998653  2334567899999999999999999999998776     789


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i------------  137 (253)
                      ++|||+. ++|..++.....   +......                                    .+            
T Consensus        81 lv~e~~~-~~l~~~~~~~~~---l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~  156 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQP---LSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD  156 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence            9999997 577665532110   0000000                                    00            


Q ss_pred             ------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh--------------
Q 043709          138 ------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN--------------  184 (253)
Q Consensus       138 ------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~--------------  184 (253)
                                        .. ....++.++||||+||++|||++|+.||.......  ....+...              
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~g~~~~~~~~~~~~  234 (372)
T cd07853         157 ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ--QLDLITDLLGTPSLEAMRSACE  234 (372)
T ss_pred             ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHcCCCCHHHHHHhhH
Confidence                              01 11236788999999999999999999987543221  11111000              


Q ss_pred             -----hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 -----LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                           .............  ...........+.+++.+||+.||.+|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         235 GARAHILRGPHKPPSLPV--LYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHHHHHhCCCCCCchHH--hcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence                 0000000000000  00111122456788999999999999999999985

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.89  E-value=1.4e-23  Score=166.81  Aligned_cols=181  Identities=20%  Similarity=0.293  Sum_probs=126.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|+||.+++    .++..+|+|.+...  .....+.+.+|+.+++.++|+||+++++.+...+..++++||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            478889999999999554    45788999999754  234456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceee-------------------------------------e----------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVR-------------------------------------I----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~-------------------------------------i----------------  137 (253)
                      +++++|.+++...... .+.+.....                                     +                
T Consensus        81 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~  159 (257)
T cd08225          81 CDGGDLMKRINRQRGV-LFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA  159 (257)
T ss_pred             CCCCcHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence            9999999887432110 011110000                                     0                


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|+||||+++||+++|..||......     ... ..... ...         ....
T Consensus       160 ~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~-~~~~~-~~~---------~~~~  223 (257)
T cd08225         160 YTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-----QLV-LKICQ-GYF---------APIS  223 (257)
T ss_pred             cccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----HHH-HHHhc-ccC---------CCCC
Confidence                         111234667899999999999999999997533211     111 11110 110         0111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+.+++.+||..+|++|||+.++++
T Consensus       224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         224 PNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            123356788889999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.89  E-value=4e-23  Score=169.28  Aligned_cols=172  Identities=22%  Similarity=0.210  Sum_probs=117.2

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|+++..   .....+.+..|..++..+ +||||+++++++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4689999999654    46788999999753   233445667777777754 899999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceee------------------------------------e--------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVR------------------------------------I--------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i--------------------  137 (253)
                      |+|..++.....   +.......                                    +                    
T Consensus        81 g~L~~~~~~~~~---~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~  157 (316)
T cd05592          81 GDLMFHIQSSGR---FDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC  157 (316)
T ss_pred             CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence            999887733211   00000000                                    0                    


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ...+..++.++|||||||++|||++|..||.....  ..+...+    ...       .+    ..+....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--~~~~~~i----~~~-------~~----~~~~~~~  220 (316)
T cd05592         158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--DELFDSI----LND-------RP----HFPRWIS  220 (316)
T ss_pred             CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--HHHHHHH----HcC-------CC----CCCCCCC
Confidence                     12234578899999999999999999999864332  1111111    000       00    1111233


Q ss_pred             HHHHHHhccccCCCCCCCCCHH-HHH
Q 043709          209 KRYSNVDLFCFRENATDRPTML-EIV  233 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~-~il  233 (253)
                      ..+.+++.+||+.+|++||++. +++
T Consensus       221 ~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         221 KEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHH
Confidence            4667888889999999999875 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=6.9e-23  Score=171.89  Aligned_cols=85  Identities=25%  Similarity=0.331  Sum_probs=74.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.+++.+.||||+++++++.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            4789999999999999654    57889999998653   2334567889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhc
Q 043709          109 EHMPNKSLDYFL  120 (253)
Q Consensus       109 e~~~~g~L~~~l  120 (253)
                      ||+++|+|.+++
T Consensus        81 E~~~gg~L~~~l   92 (377)
T cd05629          81 EFLPGGDLMTML   92 (377)
T ss_pred             eCCCCCcHHHHH
Confidence            999999998876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.89  E-value=3.7e-23  Score=170.06  Aligned_cols=173  Identities=18%  Similarity=0.156  Sum_probs=121.5

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +|.+.+.||+|+||.+++    .+++.||+|++...   .....+.+..|..++..+ +|++|+++++++...+.+++||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            578899999999999654    46789999999754   233345677788888877 5899999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|..++.....   +.......+                                                   
T Consensus        81 E~~~~g~L~~~~~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          81 EYVNGGDLMYQIQQVGR---FKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT  157 (323)
T ss_pred             cCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence            99999999887732111   000000000                                                   


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    .+....++.++|||||||++|||++|..||.....  ..+...+    . ...          ...
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~~~~i----~-~~~----------~~~  220 (323)
T cd05616         158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSI----M-EHN----------VAY  220 (323)
T ss_pred             cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHHHHHH----H-hCC----------CCC
Confidence                          22345578899999999999999999999864332  1111111    0 110          011


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTM  229 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~  229 (253)
                      +......+.+++.+||+.+|++|++.
T Consensus       221 p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         221 PKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            12234567889999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.89  E-value=2.8e-23  Score=167.77  Aligned_cols=194  Identities=18%  Similarity=0.231  Sum_probs=127.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|.++..  .....+.+.+|+.+++.++|+||+++++++..++..+++||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            3688999999999998544    46789999998754  33445789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |++++.+..+......   +.......+                                                    
T Consensus        81 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          81 YVERTLLELLEASPGG---LPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             cCCCCHHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence            9998877665532110   010000000                                                    


Q ss_pred             --------------eeecC-ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhH----------hhhc-CC--
Q 043709          138 --------------YALHG-VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIW----------NLWN-DG--  189 (253)
Q Consensus       138 --------------~~~~~-~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~----------~~~~-~~--  189 (253)
                                    ..... .++.++||||||+++|++++|..||.......  .......          .... ..  
T Consensus       158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07833         158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID--QLYLIQKCLGPLPPSHQELFSSNPRF  235 (288)
T ss_pred             ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHhhhcccCccc
Confidence                          11122 56788999999999999999998886432211  0000000          0000 00  


Q ss_pred             ---Ccccccccc-CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          190 ---SLWDLMDPM-LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       190 ---~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         .......+. .........+..+.+++.+||..+|++||++++++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence               000000000 000111223567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.88  E-value=4.2e-23  Score=169.16  Aligned_cols=172  Identities=23%  Similarity=0.225  Sum_probs=119.0

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|+++..   .....+....|..++..+ +||||+++++++...+.+++||||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4689999999654    46889999999754   133456677888888765 899999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.......+                                                        
T Consensus        81 g~L~~~i~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05620          81 GDLMFHIQDKGR---FDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC  157 (316)
T ss_pred             CcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence            999887743211   111100000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++||||+||++|||++|..||.....  ..+....    ...       .+..    +....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~~~~----~~~-------~~~~----~~~~~  220 (316)
T cd05620         158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELFESI----RVD-------TPHY----PRWIT  220 (316)
T ss_pred             CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHH----HhC-------CCCC----CCCCC
Confidence                     12234577899999999999999999999864432  1111111    000       0111    11233


Q ss_pred             HHHHHHhccccCCCCCCCCCHH-HHH
Q 043709          209 KRYSNVDLFCFRENATDRPTML-EIV  233 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~-~il  233 (253)
                      ..+.+++.+||..||++||++. +++
T Consensus       221 ~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         221 KESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHH
Confidence            5677888899999999999974 565

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.88  E-value=2.4e-23  Score=165.65  Aligned_cols=180  Identities=14%  Similarity=0.116  Sum_probs=127.2

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +|++.+.||.|+||.++.    .+++.||+|.+....   ....+.+.+|+.+++.++||||+++++.+...+..++++|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            588899999999999443    468899999997542   2456789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+.+++|..++....   .+.......+                                                    
T Consensus        81 ~~~~~~L~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  157 (258)
T cd05578          81 LLLGGDLRYHLSQKV---KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT  157 (258)
T ss_pred             CCCCCCHHHHHHhcC---CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcccc
Confidence            999999998884321   1111111100                                                    


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+||||+++|++++|..||..........   . ......          .....+.
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~-~~~~~~----------~~~~~~~  223 (258)
T cd05578         158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQ---I-RAKQET----------ADVLYPA  223 (258)
T ss_pred             ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHH---H-HHHhcc----------ccccCcc
Confidence                        1112235788999999999999999999987554321111   1 000000          0011111


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCH--HHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTM--LEIV  233 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~--~~il  233 (253)
                      ..+..+.+++.+||+.+|.+||++  ++++
T Consensus       224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         224 TWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             cCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            233678889999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.88  E-value=3.4e-23  Score=164.48  Aligned_cols=182  Identities=30%  Similarity=0.442  Sum_probs=125.9

Q ss_pred             ccccCccccccccceEe----eC----CCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           38 FSMENKLGEGGFGPGKL----LN----GEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +++.+.||.|+||.++.    ..    +..||+|.+...... ..+.+..|+.+++.++|+||+++++++...+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            45778999999999544    22    378999999765332 5678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++++|.+++...... .+.+.....+                                                   
T Consensus        81 e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             eccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            999999999888532210 0111110000                                                   


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                     ......++.++|+||+|+++|+|++ |..||...  ....+....    . ....         .
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--~~~~~~~~~----~-~~~~---------~  223 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--SNEEVLEYL----K-KGYR---------L  223 (258)
T ss_pred             ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHH----h-cCCC---------C
Confidence                           0112346778999999999999998 56665431  111111111    1 1110         1


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSML  236 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L  236 (253)
                      ......+..+.+++.+||..+|++|||+.++++.|
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      224 PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            11112455788899999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.88  E-value=2.4e-23  Score=170.90  Aligned_cols=168  Identities=17%  Similarity=0.172  Sum_probs=117.4

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++...   .....+.+..|..++..+ +||||+++++++...+.+++||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4689999999554    46889999999753   234556788899998877 699999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.......+                                                        
T Consensus        81 g~L~~~i~~~~~---l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (320)
T cd05590          81 GDLMFHIQKSRR---FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC  157 (320)
T ss_pred             chHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccc
Confidence            999887743211   000000000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|||||||++|||++|..||.....  ..+...+    . ....          ..+....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--~~~~~~i----~-~~~~----------~~~~~~~  220 (320)
T cd05590         158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAI----L-NDEV----------VYPTWLS  220 (320)
T ss_pred             cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHH----h-cCCC----------CCCCCCC
Confidence                     12234567889999999999999999999864332  1111111    0 1100          0111234


Q ss_pred             HHHHHHhccccCCCCCCCCCH
Q 043709          209 KRYSNVDLFCFRENATDRPTM  229 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~  229 (253)
                      ..+.+++.+||+.||.+||++
T Consensus       221 ~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         221 QDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHHHHHHcccCHHHCCCC
Confidence            567788889999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.88  E-value=1.1e-22  Score=167.45  Aligned_cols=174  Identities=14%  Similarity=0.184  Sum_probs=118.5

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++...   .....+.+.+|+.++..+ +||||+++++++...+.+++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4699999999654    46789999999854   234456688999999988 699999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++....   .+.+.....+                                                        
T Consensus        81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (327)
T cd05617          81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC  157 (327)
T ss_pred             CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc
Confidence            99987763211   0111100000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-chhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-TLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                               ......++.++|||||||++|||++|..||........ ...... ........          ...+...
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~----------~~~p~~~  226 (327)
T cd05617         158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL-FQVILEKP----------IRIPRFL  226 (327)
T ss_pred             CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH-HHHHHhCC----------CCCCCCC
Confidence                     12344577899999999999999999999864332211 111111 11111110          0111123


Q ss_pred             HHHHHHHhccccCCCCCCCCCH
Q 043709          208 LKRYSNVDLFCFRENATDRPTM  229 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~  229 (253)
                      ...+.+++.+||..||++|+++
T Consensus       227 ~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         227 SVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CHHHHHHHHHHhccCHHHcCCC
Confidence            3567788888999999999985

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.88  E-value=2.7e-23  Score=169.40  Aligned_cols=186  Identities=24%  Similarity=0.349  Sum_probs=126.3

Q ss_pred             cCccccCccccccccceEee----CCC----EEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKLL----NGE----QVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~----~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ++|+..+.||+|+||.+++.    ++.    .+|+|.+.... ......+.+|+.+++.++||||++++|++... ..++
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~   85 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL   85 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence            56788899999999996552    344    47888887542 23345688999999999999999999998764 4679


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ++||+++|+|.+++.....  .+.+.....+                                                 
T Consensus        86 v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          86 VTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             eehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcc
Confidence            9999999999988743211  0111100000                                                 


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++|||||||++||+++ |+.||......  ....     ....+..  .    
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~-----~~~~~~~--~----  230 (303)
T cd05110         164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPD-----LLEKGER--L----  230 (303)
T ss_pred             cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH-----HHHCCCC--C----
Confidence                              1122345678999999999999997 88887543211  1111     1111110  0    


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                         .........+..++..||..+|++||++.++++.|+++.
T Consensus       231 ---~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         231 ---PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence               001112346788899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.88  E-value=6.8e-23  Score=165.59  Aligned_cols=183  Identities=16%  Similarity=0.189  Sum_probs=124.6

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      |+..+.||+|+||+++.    .+++.+|+|.+....   ......+.+|+.+++.++|+||+.+++.+..++..+++|||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            66778999999999544    568899999996532   22335578899999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +.+|+|..++..... ..+++.....+                                                     
T Consensus        82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05632          82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG  160 (285)
T ss_pred             ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence            999999877732111 01111111110                                                     


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++|+|||||++||+++|..||.......  .......... ...      .    .....
T Consensus       161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--~~~~~~~~~~-~~~------~----~~~~~  227 (285)
T cd05632         161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--KREEVDRRVL-ETE------E----VYSAK  227 (285)
T ss_pred             CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhhh-ccc------c----ccCcc
Confidence                       1223456788999999999999999999986443211  1111101110 000      0    11122


Q ss_pred             HHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      ....+.+++.+||+.||++||+     +.+++.
T Consensus       228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             CCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            3345678888899999999999     667664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.88  E-value=1e-23  Score=167.74  Aligned_cols=183  Identities=23%  Similarity=0.344  Sum_probs=125.6

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccccccH--HHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGL--EEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      |++++.||+|+||++++    .+++.||+|.+........  ....+|+.+++.++||||+++++++...+..+++|||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            67789999999999554    4567899999986533222  23456999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      .+++|.+++....   .+.......+                                                      
T Consensus        81 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~  157 (260)
T PF00069_consen   81 PGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP  157 (260)
T ss_dssp             TTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred             ccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999998883100   0111111000                                                      


Q ss_pred             -----------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCC-CcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -----------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN-SLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -----------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                 ... ...++.++||||+|+++|+|++|..||...... ...........        .........   
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~---  226 (260)
T PF00069_consen  158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR--------PLPSSSQQS---  226 (260)
T ss_dssp             SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT--------HHHHHTTSH---
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc--------ccccccccc---
Confidence                       122 456788999999999999999999998754111 11111111000        000000000   


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+.+++.+||+.||++|||+.++++
T Consensus       227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  227 REKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             TTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             chhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            011267888999999999999999999885

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.88  E-value=8.7e-23  Score=164.66  Aligned_cols=195  Identities=18%  Similarity=0.174  Sum_probs=126.5

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      +|+..+.||.|++|.+++    .+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..+++|||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            588899999999999544    468889999997653 334567889999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      ++ +|.+++........+.+.....+                                                      
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN  159 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence            85 78777643221111121111111                                                      


Q ss_pred             -----------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC--C------Ccccccc-
Q 043709          138 -----------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND--G------SLWDLMD-  196 (253)
Q Consensus       138 -----------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~-  196 (253)
                                 .. ....++.++|+||||+++|++++|..||......  .............  .      ....... 
T Consensus       160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd07836         160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE--DQLLKIFRIMGTPTESTWPGISQLPEYKPT  237 (284)
T ss_pred             ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence                       00 1123567899999999999999999988654321  1111110000000  0      0000000 


Q ss_pred             -ccCC----CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 -PMLQ----TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 -~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       +...    ..........+.+++.+||+.||++||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence             0000    0011123456778999999999999999999885

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.88  E-value=4.2e-23  Score=172.64  Aligned_cols=195  Identities=17%  Similarity=0.200  Sum_probs=129.5

Q ss_pred             HHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           28 LASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      +.++....++|++.+.||+|+||.+++    .+++.+|+|++...   .....+.+.+|+.+++.++||||+++++.+..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            444555668999999999999999554    56889999998642   22334567899999999999999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCC-----------------------------------------CCccceeee--
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGR-----------------------------------------LGWGTRVRI--  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~-----------------------------------------~~~~~~~~i--  137 (253)
                      .+.+++||||+++|+|.+++........                                         .++.....+  
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~  194 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK  194 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence            9999999999999999988743210000                                         000000000  


Q ss_pred             -------------------eee----cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccc
Q 043709          138 -------------------YAL----HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDL  194 (253)
Q Consensus       138 -------------------~~~----~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (253)
                                         .+.    ...++.++|||||||++|||++|..||......  ...    ............
T Consensus       195 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~----~~i~~~~~~~~~  268 (371)
T cd05622         195 EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTY----SKIMNHKNSLTF  268 (371)
T ss_pred             CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH--HHH----HHHHcCCCcccC
Confidence                               000    112678999999999999999999998743321  111    111111111111


Q ss_pred             ccccCCCCCCHHHHHHHHHHhccccCCCCCC--CCCHHHHHHH
Q 043709          195 MDPMLQTEASYPILKRYSNVDLFCFRENATD--RPTMLEIVSM  235 (253)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPs~~~il~~  235 (253)
                             .........+.+++.+|+..++.+  ||+++++++.
T Consensus       269 -------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         269 -------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             -------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence                   111234456777888899844443  7899998864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.88  E-value=3.1e-23  Score=173.38  Aligned_cols=186  Identities=17%  Similarity=0.155  Sum_probs=126.4

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ...++|++.+.||+|+||.+++    .+++.+|+|.+...   .....+.+.+|+.+++.++||||+++++++.+++.++
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence            4456899999999999999654    46789999999642   2233456889999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +||||+++|+|.+++....    ++......+                                                
T Consensus       120 lv~Ey~~gg~L~~~l~~~~----~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~  195 (370)
T cd05621         120 MVMEYMPGGDLVNLMSNYD----VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET  195 (370)
T ss_pred             EEEcCCCCCcHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence            9999999999998874321    000000000                                                


Q ss_pred             ------------------eeec----CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ------------------YALH----GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ------------------~~~~----~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                        .+..    ..++.++||||+||++|||++|..||......  ...    .........    
T Consensus       196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--~~~----~~i~~~~~~----  265 (370)
T cd05621         196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--GTY----SKIMDHKNS----  265 (370)
T ss_pred             CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--HHH----HHHHhCCcc----
Confidence                              0001    12678999999999999999999998643321  111    111111110    


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCC--CCCHHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATD--RPTMLEIVSM  235 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPs~~~il~~  235 (253)
                         ............+.+++.+|+..++.+  ||+++++++.
T Consensus       266 ---~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         266 ---LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             ---cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence               111111223455677777788755544  8999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.88  E-value=4.4e-23  Score=168.42  Aligned_cols=184  Identities=22%  Similarity=0.273  Sum_probs=125.5

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      +.+.|+..+.||+|+||.++.    .+++.||+|.+....   ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            345689999999999999554    368899999986432   2334578899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |+||+. |++.+++.....  .+.+.....+                                                 
T Consensus        93 v~e~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~  169 (307)
T cd06607          93 VMEYCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN  169 (307)
T ss_pred             EHHhhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCC
Confidence            999998 466555421110  0111100000                                                 


Q ss_pred             ------------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ------------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ------------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                  ..   ....++.++||||||+++||+++|..||.......  ....    .. ....     +..   
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~--~~~~----~~-~~~~-----~~~---  234 (307)
T cd06607         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYH----IA-QNDS-----PTL---  234 (307)
T ss_pred             CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH--HHHH----Hh-cCCC-----CCC---
Confidence                        11   13457789999999999999999999975432111  0000    00 0000     000   


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ........+.+++.+||..+|++||++.+|+..
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         235 SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            111234568889999999999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.88  E-value=5.8e-23  Score=165.72  Aligned_cols=193  Identities=17%  Similarity=0.208  Sum_probs=124.5

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|+..+.||+|++|.+++    .+++.||||.+...  .....+.+.+|+.+++.++||||+++++++.+.+..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            588899999999999544    46889999998754  233446789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +. ++|..++..... ..+.+.....+                                                     
T Consensus        81 ~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~  158 (284)
T cd07860          81 LH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT  158 (284)
T ss_pred             cc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence            96 577776633111 01111100000                                                     


Q ss_pred             ------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC---------------
Q 043709          138 ------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG---------------  189 (253)
Q Consensus       138 ------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------  189 (253)
                                  ... ...++.++||||||+++|||++|+.||....... ...... .......               
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07860         159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIF-RTLGTPDEVVWPGVTSLPDYKP  236 (284)
T ss_pred             cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHH-HHhCCCChhhhhhhhHHHHHHh
Confidence                        111 1224678999999999999999999986433211 111100 0000000               


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .......... ..........+.+++.+||+.||++||+++++++
T Consensus       237 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         237 SFPKWARQDF-SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             hcccccccCH-HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            0000000000 0001123356778999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.88  E-value=6.4e-23  Score=163.91  Aligned_cols=180  Identities=20%  Similarity=0.281  Sum_probs=122.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-----cccHHHHHHHHHHHHhccCCCcceEeEEEEec--Cee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-----GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~  104 (253)
                      .+|++.+.||+|+||.++.    .++..||+|.+....     ....+.+.+|+.+++.++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4789999999999999544    468899999886321     22346788999999999999999999988763  468


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      +++|||+++|+|.+++.....   +.......+                                               
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~  158 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGA---LTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT  158 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence            899999999999988733211   000000000                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++|||||||++||+++|+.||.......     .. .... ..       
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~~-~~~~-~~-------  224 (265)
T cd06652         159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA-----AI-FKIA-TQ-------  224 (265)
T ss_pred             ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH-----HH-HHHh-cC-------
Confidence                                 1122345678999999999999999999985331110     00 0000 00       


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       ......+......+.+++.+||. +|.+||++++|++
T Consensus       225 -~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         225 -PTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             -CCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence             00111223344566777788885 9999999999885

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.88  E-value=1.9e-22  Score=166.16  Aligned_cols=197  Identities=16%  Similarity=0.188  Sum_probs=126.8

Q ss_pred             Cccccc--cccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEG--GFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G--~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|  +||.++.    .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++..++..++++||+.+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~   83 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY   83 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence            567777  6666443    47899999998753  233456788999999999999999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|.+++...... .++......+                                                        
T Consensus        84 ~~l~~~l~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (328)
T cd08226          84 GSANSLLKTYFPE-GMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY  162 (328)
T ss_pred             CCHHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence            9999887432111 0111110000                                                        


Q ss_pred             ----------------eeec--CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh--------------
Q 043709          138 ----------------YALH--GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL--------------  185 (253)
Q Consensus       138 ----------------~~~~--~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~--------------  185 (253)
                                      ....  ..++.++|||||||++|||++|..||........ .........              
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  241 (328)
T cd08226         163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITTFPCEES  241 (328)
T ss_pred             cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccccchhhh
Confidence                            0001  2356789999999999999999999865432111 000000000              


Q ss_pred             -----------------hcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          186 -----------------WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       186 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                                       .........................+.+++.+||+.||++|||+.+++  ..++.+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~  315 (328)
T cd08226         242 RMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK  315 (328)
T ss_pred             hhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence                             000000011111122222344567789999999999999999999998  3444443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.88  E-value=4.1e-23  Score=176.25  Aligned_cols=200  Identities=14%  Similarity=0.169  Sum_probs=123.5

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec--------
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--------  101 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--------  101 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++....    ....+|+.+++.++||||+++++++...        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            446799999999999999654    468899999886432    2345799999999999999998877432        


Q ss_pred             CeeEEEEeeCCCCChhhhccCC-CCcCCCCccc-------------------------------------eeee------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDP-ANKGRLGWGT-------------------------------------RVRI------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~-------------------------------------~~~i------  137 (253)
                      ..++++|||+++ +|.+++... .....+++..                                     .+.+      
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence            247799999985 565443210 0000000000                                     0000      


Q ss_pred             ----------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc-------
Q 043709          138 ----------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN-------  187 (253)
Q Consensus       138 ----------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~-------  187 (253)
                                            .. ....|+.++|||||||++|||++|..||...... ..+.... .....       
T Consensus       219 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~-~~~~~p~~~~~~  296 (440)
T PTZ00036        219 KNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRII-QVLGTPTEDQLK  296 (440)
T ss_pred             hhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-HHhCCCCHHHHH
Confidence                                  11 2235888999999999999999999998654321 1111111 10000       


Q ss_pred             --CC-----CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          188 --DG-----SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       188 --~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                        ..     .........+....+...+..+.+|+.+||..||.+|||+.+++  ..+.++.
T Consensus       297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence              00     00000001111111122345788999999999999999999998  4455543

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.88  E-value=6.2e-23  Score=165.45  Aligned_cols=184  Identities=20%  Similarity=0.279  Sum_probs=121.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHH-HHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMML-IAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++.... ......+..|+.+ ++.++||||+++++++..++..+++||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            4788999999999999554    468999999997542 2233456667765 556689999999999999999999999


Q ss_pred             eCCCCChhhhccCCC-CcCCCCcccee-----------------e--------------------e--------------
Q 043709          110 HMPNKSLDYFLFDPA-NKGRLGWGTRV-----------------R--------------------I--------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~-~~~~~~~~~~~-----------------~--------------------i--------------  137 (253)
                      |++ |+|.+++.... ....+++....                 .                    +              
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~  159 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA  159 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence            997 67766653211 00111111000                 0                    0              


Q ss_pred             --------------ee----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 --------------YA----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 --------------~~----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                    ..    ....++.++|+|||||++|+|++|..||.........+.     ... ....     +..
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~-----~~~-~~~~-----~~~  228 (283)
T cd06617         160 KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK-----QVV-EEPS-----PQL  228 (283)
T ss_pred             cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH-----HHH-hcCC-----CCC
Confidence                          00    013356789999999999999999999853222111110     000 0000     111


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         .....+..+.+++.+||..+|++||++.++++
T Consensus       229 ---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         229 ---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             ---CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               01123456888999999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.88  E-value=3.1e-23  Score=168.52  Aligned_cols=182  Identities=17%  Similarity=0.203  Sum_probs=127.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      ..|+....||+|+||.++.    .+++.||+|.+........+.+.+|+.+++.++||||+++++.+...+..++++||+
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~  100 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFL  100 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecC
Confidence            3455667899999998543    468899999997654455567889999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceee------------------------------------e------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i------------------  137 (253)
                      ++++|..++....    +.+.....                                    +                  
T Consensus       101 ~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~  176 (297)
T cd06659         101 QGGALTDIVSQTR----LNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS  176 (297)
T ss_pred             CCCCHHHHHhhcC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence            9999988763311    00100000                                    0                  


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++|||||||++|||++|..||......  ......    . ...     .+.  ......
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~----~-~~~-----~~~--~~~~~~  242 (297)
T cd06659         177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRL----R-DSP-----PPK--LKNAHK  242 (297)
T ss_pred             eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH----h-ccC-----CCC--ccccCC
Confidence                       112234678899999999999999999998643221  111111    0 000     000  011112


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ....+.+++.+||+.+|.+||+++++++.
T Consensus       243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         243 ISPVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             CCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            33457788888999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.88  E-value=3.1e-23  Score=168.18  Aligned_cols=180  Identities=16%  Similarity=0.214  Sum_probs=125.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .|.....||+|+||.++.    .++..||||.+........+.+.+|+.+++.++||||+++++.+...+..+++|||++
T Consensus        23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~  102 (292)
T cd06658          23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE  102 (292)
T ss_pred             HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence            344457799999999543    4688999999876555556778999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +++|.+++....    +.+.....+                                                       
T Consensus       103 ~~~L~~~~~~~~----l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~  178 (292)
T cd06658         103 GGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL  178 (292)
T ss_pred             CCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCcee
Confidence            999988873321    111100000                                                       


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                                ......++.++||||||+++||+++|..||......  ......    .      ....+....  ....
T Consensus       179 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~----~------~~~~~~~~~--~~~~  244 (292)
T cd06658         179 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRI----R------DNLPPRVKD--SHKV  244 (292)
T ss_pred             ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH----H------hcCCCcccc--cccc
Confidence                      111234678899999999999999999998643221  111000    0      001111111  1123


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+.+++.+||..+|.+|||++++++
T Consensus       245 ~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         245 SSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            345677888899999999999999996

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.88  E-value=5.7e-23  Score=163.78  Aligned_cols=182  Identities=16%  Similarity=0.272  Sum_probs=125.9

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe--cCeeEEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVKILIY  108 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~~lv~  108 (253)
                      +|++.+.||.|+||.+++    .++..+|+|.+...  .....+.+..|+.+++.++||||+++++.+..  ....+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            478889999999999554    56789999998743  33445678899999999999999999998764  45689999


Q ss_pred             eeCCCCChhhhccCCCC-cCCCCccc---------------------eeee-----------------------------
Q 043709          109 EHMPNKSLDYFLFDPAN-KGRLGWGT---------------------RVRI-----------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~-~~~~~~~~---------------------~~~i-----------------------------  137 (253)
                      ||+++++|.+++..... ...+++..                     ...+                             
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            99999999888743110 01111100                     0000                             


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          ......++.++|+||||+++|+|++|..||....  ...+...+     ..+..      
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~-----~~~~~------  227 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKI-----KEGKF------  227 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHH-----hcCCC------
Confidence                                1112235677999999999999999999986443  11111111     11111      


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         ...+......+.+++.+||+.+|++||++.+|++
T Consensus       228 ---~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         228 ---RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             ---CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence               1112234467888999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.88  E-value=8.3e-23  Score=170.55  Aligned_cols=86  Identities=21%  Similarity=0.344  Sum_probs=74.3

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||++++    .+++.||+|++...   .....+.+..|+.++..++||||+++++.+.+.+.+++||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            4789999999999999654    46889999999753   2334457888999999999999999999999999999999


Q ss_pred             eeCCCCChhhhcc
Q 043709          109 EHMPNKSLDYFLF  121 (253)
Q Consensus       109 e~~~~g~L~~~l~  121 (253)
                      |||++|+|.+++.
T Consensus        81 E~~~gg~L~~~l~   93 (363)
T cd05628          81 EFLPGGDMMTLLM   93 (363)
T ss_pred             cCCCCCcHHHHHH
Confidence            9999999998873

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.88  E-value=1.2e-22  Score=161.25  Aligned_cols=181  Identities=21%  Similarity=0.288  Sum_probs=128.9

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeEEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKILIY  108 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~lv~  108 (253)
                      +|+..+.||+|++|.++.    .+++.+++|.+....  ....+.+.+|+.+++.++||||+++++.+...  +..++++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            477889999999999444    368899999997653  24567899999999999999999999999988  8899999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+.+++|.+++....   .+.+.....+                                                   
T Consensus        81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence            9999999999884321   1111111111                                                   


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ......++.++||||||+++|++++|..||..... .....    .....         .....
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~----~~~~~---------~~~~~  223 (260)
T cd06606         158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-PMAAL----YKIGS---------SGEPP  223 (260)
T ss_pred             ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHH----Hhccc---------cCCCc
Confidence                            01112256789999999999999999999875541 11110    11100         01111


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+......+.+++.+||..+|++||++.++++
T Consensus       224 ~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         224 EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            122223567888899999999999999999985

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.88  E-value=1.3e-22  Score=164.36  Aligned_cols=178  Identities=20%  Similarity=0.219  Sum_probs=125.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.++.    .+++.+|+|++...   .....+.+.+|+.+++.++||||+++++++.+++..+++|
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            4688999999999999543    46889999999753   2334567899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++.....   +.......+                                                   
T Consensus        81 e~~~~~~L~~~~~~~~~---l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~  157 (290)
T cd05580          81 EYVPGGELFSHLRKSGR---FPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYT  157 (290)
T ss_pred             ecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCC
Confidence            99999999988743211   111110000                                                   


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++||||||+++|+|++|..||.....  .......    . .+..          ..+..
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~----~-~~~~----------~~~~~  220 (290)
T cd05580         158 LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--IQIYEKI----L-EGKV----------RFPSF  220 (290)
T ss_pred             CCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----h-cCCc----------cCCcc
Confidence                       11223456789999999999999999999864331  1111111    0 1100          01112


Q ss_pred             HHHHHHHHhccccCCCCCCCC-----CHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRP-----TMLEIV  233 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RP-----s~~~il  233 (253)
                      ....+.+++.+||..+|.+||     ++++++
T Consensus       221 ~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         221 FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             CCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence            245677888899999999999     667766

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=2.2e-22  Score=167.59  Aligned_cols=81  Identities=17%  Similarity=0.214  Sum_probs=67.4

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ...+|++.+.||+|+||.+++    .+++.||+|.....      ....|+.+++.++||||+++++++...+..++|||
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence            345799999999999999655    35678999976432      23569999999999999999999999999999999


Q ss_pred             eCCCCChhhhcc
Q 043709          110 HMPNKSLDYFLF  121 (253)
Q Consensus       110 ~~~~g~L~~~l~  121 (253)
                      |+. |+|.+++.
T Consensus       138 ~~~-~~l~~~l~  148 (357)
T PHA03209        138 HYS-SDLYTYLT  148 (357)
T ss_pred             ccC-CcHHHHHH
Confidence            996 58877763

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.88  E-value=1.1e-22  Score=166.53  Aligned_cols=194  Identities=15%  Similarity=0.148  Sum_probs=124.7

Q ss_pred             ccccCccccccccce--EeeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           38 FSMENKLGEGGFGPG--KLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~--~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.+++.+|.|+++.+  ...+++.||||+++..  .....+.+.+|+.+++.++||||+++++++...+..+++|||+++
T Consensus         4 ~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~   83 (314)
T cd08216           4 TLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY   83 (314)
T ss_pred             hhhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence            344555566666653  3357899999999754  345567899999999999999999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|.+++...... .+.......+                                                        
T Consensus        84 ~~l~~~l~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~  162 (314)
T cd08216          84 GSCEDLLKTHFPE-GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH  162 (314)
T ss_pred             CCHHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence            9999887432111 0000000000                                                        


Q ss_pred             ----------------eee--cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh----c-------C
Q 043709          138 ----------------YAL--HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW----N-------D  188 (253)
Q Consensus       138 ----------------~~~--~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~----~-------~  188 (253)
                                      ...  ...++.++|+|||||++|||++|..||........ ..... ....    .       .
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~  240 (314)
T cd08216         163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-LLEKV-RGTVPCLLDKSTYPLYE  240 (314)
T ss_pred             cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH-hccCccccccCchhhhc
Confidence                            000  12367889999999999999999999875432211 11111 0000    0       0


Q ss_pred             CCccc----cccc----cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 GSLWD----LMDP----MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 ~~~~~----~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....    ...+    .............+.+++.+||..||++|||++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            00000    0000    0111112234567888999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.88  E-value=1.8e-22  Score=163.53  Aligned_cols=85  Identities=22%  Similarity=0.330  Sum_probs=71.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|++|.+++    .+++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            5799999999999999554    367899999997542 22334577899999999999999999999999999999999


Q ss_pred             CCCCChhhhcc
Q 043709          111 MPNKSLDYFLF  121 (253)
Q Consensus       111 ~~~g~L~~~l~  121 (253)
                      +.+ +|.+++.
T Consensus        85 ~~~-~L~~~~~   94 (291)
T cd07844          85 LDT-DLKQYMD   94 (291)
T ss_pred             CCC-CHHHHHH
Confidence            984 8888764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.88  E-value=3.7e-23  Score=166.86  Aligned_cols=194  Identities=18%  Similarity=0.138  Sum_probs=124.7

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|+||.+++    .+|+.+|+|.+...  .......+.+|+.+++.++||||+++++++.+.+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            478889999999999544    46889999999753  223345678899999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +. ++|.+++.+...  .+++.....+                                                     
T Consensus        81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  157 (284)
T cd07839          81 CD-QDLKKYFDSCNG--DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYS  157 (284)
T ss_pred             CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcC
Confidence            98 477666532110  0111110000                                                     


Q ss_pred             ------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC--------Ccccc-c
Q 043709          138 ------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG--------SLWDL-M  195 (253)
Q Consensus       138 ------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~  195 (253)
                                  .. ....++.++|||||||++|||++|+.|+......... ............        ..... .
T Consensus       158 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07839         158 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LKRIFRLLGTPTEESWPGVSKLPDYKP  236 (284)
T ss_pred             CCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHH-HHHHHHHhCCCChHHhHHhhhcccccc
Confidence                        01 1123577899999999999999999987544332111 111100000000        00000 0


Q ss_pred             cccCC-----CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 DPMLQ-----TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 ~~~~~-----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+...     .......+..+.+++.+||+.||.+|||++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         237 YPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             cCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            00000     0111224467788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.88  E-value=2e-22  Score=162.79  Aligned_cols=180  Identities=17%  Similarity=0.215  Sum_probs=126.9

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .|...+.||+|++|.++.    .+++.+++|.+........+.+.+|+.+++.++||||+++++++...+..++++||++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~   99 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE   99 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence            455567999999999443    4678899999876554555678999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +++|.+++....    +++.....+                                                       
T Consensus       100 ~~~L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~  175 (285)
T cd06648         100 GGALTDIVTHTR----MNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSL  175 (285)
T ss_pred             CCCHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccc
Confidence            999998874311    111100000                                                       


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                                ......++.++||||||+++|||++|..||......  ......    . ...     .+...  .....
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~----~-~~~-----~~~~~--~~~~~  241 (285)
T cd06648         176 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRI----R-DNL-----PPKLK--NLHKV  241 (285)
T ss_pred             cCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHH----H-hcC-----CCCCc--ccccC
Confidence                      111234678899999999999999999998643211  111111    0 010     01110  11123


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +..+.+++.+||+.+|++||++.++++
T Consensus       242 ~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         242 SPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            457888999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.88  E-value=6.7e-24  Score=159.54  Aligned_cols=187  Identities=18%  Similarity=0.232  Sum_probs=134.5

Q ss_pred             hcCccccCccccccccc----eEeeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .+.|++.+.||+|.|+.    ....+|+.+|+|+++..  +....+.+.+|+++-+.|+|||||++.....+.+..+||+
T Consensus        10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF   89 (355)
T KOG0033|consen   10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   89 (355)
T ss_pred             chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence            45788999999999998    45588999999999754  4457788999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhc-------------------------------cCCCC--------------cCCCCccceeee------
Q 043709          109 EHMPNKSLDYFL-------------------------------FDPAN--------------KGRLGWGTRVRI------  137 (253)
Q Consensus       109 e~~~~g~L~~~l-------------------------------~~~~~--------------~~~~~~~~~~~i------  137 (253)
                      |++.||+|..-|                               ++.-+              .+...+.....+      
T Consensus        90 e~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~  169 (355)
T KOG0033|consen   90 DLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW  169 (355)
T ss_pred             ecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence            999999995533                               00000              000011111110      


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   +....+|+..+|||+.|++||-|+.|..||......  .+.+.+     ..+      .-...+...
T Consensus       170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~--rlye~I-----~~g------~yd~~~~~w  236 (355)
T KOG0033|consen  170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYEQI-----KAG------AYDYPSPEW  236 (355)
T ss_pred             ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--HHHHHH-----hcc------ccCCCCccc
Confidence                         445677999999999999999999999998753221  111111     001      011122222


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+.+...+|+.+||..||.+|.|+.|.++
T Consensus       237 ~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  237 DTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            345567888899999999999999999773

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.88  E-value=3e-23  Score=176.04  Aligned_cols=204  Identities=20%  Similarity=0.225  Sum_probs=136.4

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC------eeE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG------VKI  105 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~------~~~  105 (253)
                      .|...+.||+||||.|+.    .+|+.||||.++.. .....+...+|+++|++++|||||+++++-....      ...
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            466778999999999554    67999999999864 4566788999999999999999999998775443      578


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++||||.+|+|+.++++..+...++....+.+                                                
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE  173 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence            99999999999999976665544433322222                                                


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC--CcchhhhhhHhhhcCCCcccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN--SLTLLGYVIWNLWNDGSLWDL  194 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  194 (253)
                                           +...+.|+..+|.|||||++|+++||..||-+....  ..++.....-...........
T Consensus       174 l~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~  253 (732)
T KOG4250|consen  174 LDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQ  253 (732)
T ss_pred             CCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeee
Confidence                                 111467899999999999999999999999877654  222222221111100000000


Q ss_pred             --------ccccCCC--CCCHHHHHHHHHHhccccCCCCCCCC--CHHHHHHHHhhcc
Q 043709          195 --------MDPMLQT--EASYPILKRYSNVDLFCFRENATDRP--TMLEIVSMLSNEI  240 (253)
Q Consensus       195 --------~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~RP--s~~~il~~L~~~~  240 (253)
                              .+..++.  .........+.+.+..++..+|.+|-  .+.+....+.+++
T Consensus       254 ~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL  311 (732)
T KOG4250|consen  254 EEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL  311 (732)
T ss_pred             cccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence                    0001111  11122233455566667777888887  6666666666665

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.7e-22  Score=165.62  Aligned_cols=87  Identities=21%  Similarity=0.224  Sum_probs=74.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccccc---ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG---QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|+..+.||+|++|.++.    .+++.||+|.+.....   ...+.+..|+.+++.++||||+++++.+...+..+++|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            3688899999999999554    3588999999975422   24567899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccC
Q 043709          109 EHMPNKSLDYFLFD  122 (253)
Q Consensus       109 e~~~~g~L~~~l~~  122 (253)
                      ||+.+++|.+++..
T Consensus        81 e~~~~~~L~~~~~~   94 (316)
T cd05574          81 DYCPGGELFRLLQR   94 (316)
T ss_pred             EecCCCCHHHHHHh
Confidence            99999999998753

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=2.1e-22  Score=171.87  Aligned_cols=191  Identities=15%  Similarity=0.142  Sum_probs=122.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      .+|.+.+.||+|+||.+++    .+++.||||....      ..+.+|+.+++.++||||+++++++...+..+++|+++
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~  242 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKY  242 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEcc
Confidence            3699999999999999655    4578899996432      34678999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      . |+|..++.....  .+.+.....+                                                      
T Consensus       243 ~-~~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~  319 (461)
T PHA03211        243 R-SDLYTYLGARLR--PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH  319 (461)
T ss_pred             C-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence            6 688777632111  1222211111                                                      


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC------CcchhhhhhHhhhcCCCccccc---
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN------SLTLLGYVIWNLWNDGSLWDLM---  195 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---  195 (253)
                                   ......++.++|||||||++|||+++..++......      ...+...+..............   
T Consensus       320 ~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~  399 (461)
T PHA03211        320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSR  399 (461)
T ss_pred             cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchH
Confidence                         112234778899999999999999988776543321      1112222111111111111000   


Q ss_pred             -------------cccCCCCCC---HHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          196 -------------DPMLQTEAS---YPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       196 -------------~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                                   .+.......   ......+.+|+.+||+.||.+|||+.|+++.
T Consensus       400 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        400 LVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             HHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence                         000000000   1123367789999999999999999999863

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.87  E-value=1.4e-22  Score=166.24  Aligned_cols=185  Identities=22%  Similarity=0.261  Sum_probs=125.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +.|+..+.||+|+||.+++    .++..+|+|.+...   ..+....+.+|+.+++.++|||++++++++..++..+++|
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            3478889999999999544    46789999998743   2233457889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+.+ +|.+++.....  .+.+.....+                                                   
T Consensus       105 e~~~g-~l~~~~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (317)
T cd06635         105 EYCLG-SASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSF  181 (317)
T ss_pred             eCCCC-CHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccc
Confidence            99974 66665522110  0111110000                                                   


Q ss_pred             ----------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ----------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ----------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                ..   ..+.++.++|||||||++|||++|..||.....  ......+    . ....        .....
T Consensus       182 ~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~----~-~~~~--------~~~~~  246 (317)
T cd06635         182 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHI----A-QNES--------PTLQS  246 (317)
T ss_pred             cCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHH----H-hccC--------CCCCC
Confidence                      01   234577889999999999999999999754321  1111111    0 0100        01111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhh
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN  238 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~  238 (253)
                      ......+.+++.+||+.+|.+||++.+|++.+-.
T Consensus       247 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         247 NEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV  280 (317)
T ss_pred             ccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence            2234567889999999999999999999975433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.87  E-value=1.3e-22  Score=166.73  Aligned_cols=173  Identities=17%  Similarity=0.162  Sum_probs=120.4

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +|+..+.||+|+||.+++    .+++.||+|++...   .....+.+..|..++..+. |++|+++++++...+.+++||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            467789999999999654    46889999999753   2344566888999998885 678889999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++.....   +.+.....+                                                   
T Consensus        81 Ey~~~g~L~~~i~~~~~---l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~  157 (323)
T cd05615          81 EYVNGGDLMYHIQQVGK---FKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT  157 (323)
T ss_pred             cCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence            99999999887732110   111000000                                                   


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ......++.++||||+||++|||++|..||.....  ......+    .. ..          ...
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~i----~~-~~----------~~~  220 (323)
T cd05615         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--DELFQSI----ME-HN----------VSY  220 (323)
T ss_pred             ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHH----Hh-CC----------CCC
Confidence                          22334577899999999999999999999864432  1111111    10 00          011


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTM  229 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~  229 (253)
                      +......+.+++.+||+.+|.+|++.
T Consensus       221 p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         221 PKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             CccCCHHHHHHHHHHcccCHhhCCCC
Confidence            11234567888899999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.87  E-value=1.3e-22  Score=166.84  Aligned_cols=169  Identities=15%  Similarity=0.109  Sum_probs=114.6

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHH-HHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMM-LIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~-~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++...   .......+..|.. +++.++||||+++++.+...+..++||||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4689999999554    47899999999753   1223344555555 46778999999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.......+                                                        
T Consensus        81 g~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (323)
T cd05575          81 GELFFHLQRERS---FPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC  157 (323)
T ss_pred             CCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc
Confidence            999887743211   110000000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|||||||++|||++|..||......  .+...+    . ...      ...    .....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~i----~-~~~------~~~----~~~~~  220 (323)
T cd05575         158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA--EMYDNI----L-NKP------LRL----KPNIS  220 (323)
T ss_pred             CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH--HHHHHH----H-cCC------CCC----CCCCC
Confidence                     123345788999999999999999999998643221  111111    1 000      001    11224


Q ss_pred             HHHHHHhccccCCCCCCCCCHH
Q 043709          209 KRYSNVDLFCFRENATDRPTML  230 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~  230 (253)
                      ..+.+++.+||+.||.+||++.
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         221 VSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHHHHHHHhhcCHHhCCCCC
Confidence            5678888899999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.87  E-value=1.2e-21  Score=163.26  Aligned_cols=198  Identities=15%  Similarity=0.146  Sum_probs=124.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC-----
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-----  102 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-----  102 (253)
                      ..++|++.+.||+|+||.+++    .++..||+|++...  .......+.+|+.+++.++||||+++++++...+     
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence            347899999999999999554    46889999999753  3344567889999999999999999999986543     


Q ss_pred             -eeEEEEeeCCCCChhhhccCCCCc----------------------------------------CCCC-----------
Q 043709          103 -VKILIYEHMPNKSLDYFLFDPANK----------------------------------------GRLG-----------  130 (253)
Q Consensus       103 -~~~lv~e~~~~g~L~~~l~~~~~~----------------------------------------~~~~-----------  130 (253)
                       .++++|||+.+ +|...+......                                        ...+           
T Consensus        99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~  177 (359)
T cd07876          99 QDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF  177 (359)
T ss_pred             ceeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCc
Confidence             47999999986 454433110000                                        0000           


Q ss_pred             ----------ccceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-------------chhhhh---hHh
Q 043709          131 ----------WGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-------------TLLGYV---IWN  184 (253)
Q Consensus       131 ----------~~~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-------------~~~~~~---~~~  184 (253)
                                +..+.  ......++.++|||||||++|+|++|..||........             .+....   ...
T Consensus       178 ~~~~~~~t~~y~aPE--~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (359)
T cd07876         178 MMTPYVVTRYYRAPE--VILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRN  255 (359)
T ss_pred             cCCCCcccCCCCCch--hccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence                      00000  23345678899999999999999999999875432100             000000   000


Q ss_pred             hh-cCCCcc-----cccccc-C--CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 LW-NDGSLW-----DLMDPM-L--QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 ~~-~~~~~~-----~~~~~~-~--~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .. ......     +....- .  ...........+.+++.+||+.||++|||+.++++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         256 YVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             HHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence            00 000000     000000 0  00011122356788999999999999999999996

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=4.1e-22  Score=158.52  Aligned_cols=174  Identities=25%  Similarity=0.376  Sum_probs=116.4

Q ss_pred             CccccccccceEe----eCC----------CEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           42 NKLGEGGFGPGKL----LNG----------EQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      +.||+|+||.+++    .++          ..+++|.+...... ...+.+|+.+++.++||||+++++++.. +..+++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            4689999999543    122          24788877654332 6789999999999999999999999988 778999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCcccee-------------------------------------------ee-------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRV-------------------------------------------RI-------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~-------------------------------------------~i-------  137 (253)
                      |||+++|+|.+++......  +++....                                           .+       
T Consensus        79 ~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~  156 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNN--VSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI  156 (259)
T ss_pred             EEcCCCCcHHHHHHhhccC--CCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence            9999999999888432210  1111000                                           00       


Q ss_pred             ------------------eeecC--ccccccceeehhHHHHHHHhC-CCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ------------------YALHG--VFSIKSDVFSFGVLLLETLSS-KKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ------------------~~~~~--~~~~~~DiwSlG~~l~ell~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                        .....  .++.++||||||+++||++++ ..|+......  ......     .....     
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~-----~~~~~-----  224 (259)
T cd05037         157 TVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFY-----QDQHR-----  224 (259)
T ss_pred             ccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHH-----hcCCC-----
Confidence                              11112  467789999999999999995 5555433211  111111     00000     


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                        ...    .....+.+++.+||..+|++||++.+|++.|+
T Consensus       225 --~~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         225 --LPM----PDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             --CCC----CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence              000    01157788999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.87  E-value=3.8e-22  Score=161.06  Aligned_cols=193  Identities=17%  Similarity=0.126  Sum_probs=126.5

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|++|.+++    .+++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+..++|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            478899999999999544    468899999997543  33456799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      + +++|.+++.....  .+.+.....+                                                     
T Consensus        81 ~-~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~  157 (286)
T cd07832          81 M-PSDLSEVLRDEER--PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY  157 (286)
T ss_pred             c-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence            9 9999988743211  0111100000                                                     


Q ss_pred             -------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC-----------CCcc
Q 043709          138 -------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND-----------GSLW  192 (253)
Q Consensus       138 -------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~  192 (253)
                                   .. ....++.++||||+||++|||++|.++|.....  ..............           ....
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07832         158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAIVFRTLGTPNEETWPGLTSLPDYN  235 (286)
T ss_pred             ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHHHHHHcCCCChHHHhhccCcchhh
Confidence                         01 122357889999999999999999766543221  11111110100000           0000


Q ss_pred             ccccccCC----CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 DLMDPMLQ----TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ~~~~~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+...    ..........+.+++.+||..+|.+||+++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         236 KITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             cccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            00000000    0011123467888999999999999999999986

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.87  E-value=1.4e-22  Score=169.60  Aligned_cols=183  Identities=17%  Similarity=0.209  Sum_probs=136.0

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .....|.+...||+|.|+++.+    .++..||||.+.+.  .....+.+.+|+++|+.+.|||||+++++......+|+
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            3456899999999999999444    67999999999866  34445669999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcC---------------------------------CCCccceeee----------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKG---------------------------------RLGWGTRVRI----------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~---------------------------------~~~~~~~~~i----------------  137 (253)
                      ||||+.+|.+++++.+.....                                 .+.+...+.|                
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lq  212 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQ  212 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccccccc
Confidence            999999999999994322111                                 1222222222                


Q ss_pred             ------------eeecC-ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC--C
Q 043709          138 ------------YALHG-VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT--E  202 (253)
Q Consensus       138 ------------~~~~~-~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  202 (253)
                                  +..+. .-++.+|+||+|+++|.|++|..||++...                   ...-...++.  .
T Consensus       213 t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l-------------------k~Lr~rvl~gk~r  273 (596)
T KOG0586|consen  213 TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL-------------------KELRPRVLRGKYR  273 (596)
T ss_pred             ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc-------------------ccccchheeeeec
Confidence                        12222 346789999999999999999999974322                   1122222222  2


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+..+..+..+++.+.+-.+|.+|+++++|..
T Consensus       274 Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  274 IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence            22344556778888899999999999999884

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.87  E-value=2.2e-22  Score=168.12  Aligned_cols=198  Identities=14%  Similarity=0.123  Sum_probs=124.1

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec------
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK------  101 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~------  101 (253)
                      ..++|++.+.||+|+||.++.    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            457899999999999999544    46889999999753  234456788999999999999999999987643      


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCc-----------------------------CC--CCccceeee-------------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANK-----------------------------GR--LGWGTRVRI-------------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~-----------------------------~~--~~~~~~~~i-------------  137 (253)
                      ..+++||||+.+ +|..++......                             ..  +.-.....+             
T Consensus       102 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~  180 (364)
T cd07875         102 QDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  180 (364)
T ss_pred             CeEEEEEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC
Confidence            357999999985 565544110000                             00  000000000             


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh------------------
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN------------------  184 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~------------------  184 (253)
                                     ...+..++.++|||||||++|||++|+.||.......  ....+...                  
T Consensus       181 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (364)
T cd07875         181 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID--QWNKVIEQLGTPCPEFMKKLQPTVRT  258 (364)
T ss_pred             cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCCHHHHHhhhHHHHH
Confidence                           1233457889999999999999999999986543211  00000000                  


Q ss_pred             -hhcCCCcc-----cccccc---CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 -LWNDGSLW-----DLMDPM---LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 -~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       ........     ......   ............+.+++.+||+.||++|||+.++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             HHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence             00000000     000000   000111112346788999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.87  E-value=5.2e-22  Score=156.92  Aligned_cols=182  Identities=21%  Similarity=0.286  Sum_probs=128.2

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      +|+..+.||+|++|.++.    .+++.+++|++........+.+.+|+.+++.++||||+++++.+...+..++++||++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   80 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS   80 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence            477889999999999444    3588999999986554566789999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +++|.+++....  ..+.+.....+                                                       
T Consensus        81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  158 (253)
T cd05122          81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV  158 (253)
T ss_pred             CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence            999999875431  11111111100                                                       


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|+||||+++|++++|..||........  ..    .. ..........       .....
T Consensus       159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~----~~-~~~~~~~~~~-------~~~~~  224 (253)
T cd05122         159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA--LF----KI-ATNGPPGLRN-------PEKWS  224 (253)
T ss_pred             cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH--HH----HH-HhcCCCCcCc-------ccccC
Confidence                     01112346789999999999999999999764321110  00    00 0011111110       11124


Q ss_pred             HHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          209 KRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+.+++.+||+.||++|||+.++++
T Consensus       225 ~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         225 DEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhc
Confidence            56788888999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.87  E-value=2.2e-22  Score=169.61  Aligned_cols=131  Identities=21%  Similarity=0.292  Sum_probs=103.6

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-C-----CCcceEeEEEEecCeeEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-D-----INLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~nIv~~~~~~~~~~~~~l  106 (253)
                      .|++.+.||+|+||.|.+    .+++.||||+++.. +.-..+...|+.+|..++ |     -|+|++++++...++.+|
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            789999999999999443    67999999999864 344466778999999986 4     499999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |.|+... +|.++|+.....+ ++......+                                                 
T Consensus       266 VfELL~~-NLYellK~n~f~G-lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFRG-LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ  343 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence            9999985 9999996544332 222211111                                                 


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFY  170 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~  170 (253)
                                     ++++.+|+.+.||||||||+.||++|.+-|.+.
T Consensus       344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~  391 (586)
T KOG0667|consen  344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD  391 (586)
T ss_pred             cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence                           677888999999999999999999996655544

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.87  E-value=3.9e-22  Score=161.69  Aligned_cols=194  Identities=16%  Similarity=0.104  Sum_probs=125.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~lv  107 (253)
                      ++|++.+.||.|+||.++.    .+++.+|+|.++...  ......+.+|+.+++.++||||+++++++...  +..+++
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            4788999999999999544    457889999997542  23334678899999999999999999999877  889999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+. ++|.+++.....  .+.+.....+                                                  
T Consensus        85 ~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  161 (293)
T cd07843          85 MEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK  161 (293)
T ss_pred             ehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence            99998 488777643211  1111110000                                                  


Q ss_pred             ---------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh----------------
Q 043709          138 ---------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL----------------  185 (253)
Q Consensus       138 ---------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~----------------  185 (253)
                                     .. ....++.++|+||+|+++|||++|..||......  ..........                
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (293)
T cd07843         162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI--DQLNKIFKLLGTPTEKIWPGFSELPG  239 (293)
T ss_pred             ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCchHHHHHhhccch
Confidence                           00 1123567899999999999999999988644321  1111110000                


Q ss_pred             hcCCCccccccccCCCCCCHH-HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          186 WNDGSLWDLMDPMLQTEASYP-ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .............+....... ....+.+++.+||+.+|++|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            000000011111111111111 3556778899999999999999999985

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.87  E-value=6.3e-22  Score=157.84  Aligned_cols=175  Identities=19%  Similarity=0.186  Sum_probs=121.6

Q ss_pred             cccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      ||.|++|.+++    .+++.+|+|.+....   ....+.+.+|+.+++.++||||+++++.+.+++..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            68999998443    458899999997542   23446789999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCcCCCCccceeee-----------------------------------------------------------
Q 043709          117 DYFLFDPANKGRLGWGTRVRI-----------------------------------------------------------  137 (253)
Q Consensus       117 ~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------------  137 (253)
                      .+++.+...   +.......+                                                           
T Consensus        81 ~~~l~~~~~---l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  157 (262)
T cd05572          81 WTILRDRGL---FDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE  157 (262)
T ss_pred             HHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence            998844221   111110000                                                           


Q ss_pred             -----eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHH
Q 043709          138 -----YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYS  212 (253)
Q Consensus       138 -----~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (253)
                           ......++.++|+||+|+++|++++|..||.....+........    ....         .....+......+.
T Consensus       158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~---------~~~~~~~~~~~~~~  224 (262)
T cd05572         158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI----LKGN---------GKLEFPNYIDKAAK  224 (262)
T ss_pred             ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH----hccC---------CCCCCCcccCHHHH
Confidence                 11123466789999999999999999999875543221111111    1000         01111112245788


Q ss_pred             HHhccccCCCCCCCCC-----HHHHHH
Q 043709          213 NVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       213 ~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      +++.+||+.+|++||+     +.++++
T Consensus       225 ~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         225 DLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHHccCChhhCcCCcccCHHHHhc
Confidence            8999999999999999     777765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.87  E-value=4.4e-22  Score=160.94  Aligned_cols=194  Identities=18%  Similarity=0.206  Sum_probs=120.2

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhc---cCCCcceEeEEEEe-----cC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKL---QDINLVRIIGCCVE-----KG  102 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l---~H~nIv~~~~~~~~-----~~  102 (253)
                      +|++.+.||+|+||.+++    .+++.||+|.+...  .......+.+|+.+++.+   .||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            478889999999999554    47889999998753  222234566777777665   69999999998864     24


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------  137 (253)
                      .++++|||+.+ +|.+++...... .++......+                                             
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPP-GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence            58999999984 887776432110 0111111000                                             


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh--hcCCCccc---
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL--WNDGSLWD---  193 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~---  193 (253)
                                         ......++.++||||+||++|||++|.+||.......  .........  ........   
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07863         159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD--QLGKIFDLIGLPPEDDWPRDVT  236 (288)
T ss_pred             cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH--HHHHHHHHhCCCChhhCccccc
Confidence                               1123457789999999999999999998875443211  111110000  00000000   


Q ss_pred             ----cccccC---CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          194 ----LMDPML---QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       194 ----~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                          ...+..   ...........+.+++.+||+.||++|||+.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                000000   00111223456788999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.87  E-value=1.1e-23  Score=167.88  Aligned_cols=198  Identities=21%  Similarity=0.256  Sum_probs=141.5

Q ss_pred             HHHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEE
Q 043709           29 ASISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCC   98 (253)
Q Consensus        29 ~~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~   98 (253)
                      +++.....++.....+.+|.||.++..         +.+.|.+|.++.. ++-.+..++.|..++..++|||+..+.|++
T Consensus       277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~  356 (563)
T KOG1024|consen  277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS  356 (563)
T ss_pred             HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence            355566667888888999999994431         2445778877654 556677899999999999999999999999


Q ss_pred             Eec-CeeEEEEeeCCCCChhhhccC-----CCCcCCCCccceeee-----------------------------------
Q 043709           99 VEK-GVKILIYEHMPNKSLDYFLFD-----PANKGRLGWGTRVRI-----------------------------------  137 (253)
Q Consensus        99 ~~~-~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i-----------------------------------  137 (253)
                      ..+ ..+++++.+..-|+|..++..     ......+.-.+.+.+                                   
T Consensus       357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVk  436 (563)
T KOG1024|consen  357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVK  436 (563)
T ss_pred             eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEE
Confidence            754 678899999999999999952     111111111110000                                   


Q ss_pred             --------------------------------eeecCccccccceeehhHHHHHHHhC-CCCcCcCCCCCcchhhhhhHh
Q 043709          138 --------------------------------YALHGVFSIKSDVFSFGVLLLETLSS-KKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 --------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~-~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                      .+.+..|+.++|+||||++||||+|. +.|+-  +.+..++       
T Consensus       437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pya--eIDPfEm-------  507 (563)
T KOG1024|consen  437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYA--EIDPFEM-------  507 (563)
T ss_pred             eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcc--ccCHHHH-------
Confidence                                            34556699999999999999999874 56643  2222222       


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                             ...+...++-..+.+++.++..+|..||+..|++||+++|++.=|.+....
T Consensus       508 -------~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q  558 (563)
T KOG1024|consen  508 -------EHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ  558 (563)
T ss_pred             -------HHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence                   222333444555566778899999999999999999999999888877644

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=7.2e-22  Score=162.90  Aligned_cols=86  Identities=17%  Similarity=0.211  Sum_probs=74.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|..++..++|+||+++++++.+.+.+++||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            4789999999999999554    46889999999742   2334566889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhcc
Q 043709          109 EHMPNKSLDYFLF  121 (253)
Q Consensus       109 e~~~~g~L~~~l~  121 (253)
                      ||+++|+|.+++.
T Consensus        81 e~~~g~~L~~~l~   93 (331)
T cd05597          81 DYYVGGDLLTLLS   93 (331)
T ss_pred             ecCCCCcHHHHHH
Confidence            9999999999884

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=5.6e-22  Score=167.15  Aligned_cols=192  Identities=14%  Similarity=0.139  Sum_probs=124.3

Q ss_pred             hcCccccCccccccccceEe------eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL------LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..+|.+.+.||+|+||.+++      ..+..||+|.+...     ....+|+.+++.++||||+++++++...+..+++|
T Consensus        91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence            45799999999999999664      23567999988643     23568999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      |++. ++|.+++....   .+.+.....+                                                   
T Consensus       166 e~~~-~~l~~~l~~~~---~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~  241 (392)
T PHA03207        166 PKYK-CDLFTYVDRSG---PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT  241 (392)
T ss_pred             hhcC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccc
Confidence            9997 57777762211   1111111111                                                   


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC-cchhhhhhHhhhc-CCCccc------
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS-LTLLGYVIWNLWN-DGSLWD------  193 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~-~~~~~~~~~~~~~-~~~~~~------  193 (253)
                                      .+....|+.++|||||||++|||++|+.||....... ...+..+...... ......      
T Consensus       242 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~  321 (392)
T PHA03207        242 PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNL  321 (392)
T ss_pred             ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhH
Confidence                            1122457788999999999999999999987654321 1111111111000 000000      


Q ss_pred             -----cccccCCCCCC-------HHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          194 -----LMDPMLQTEAS-------YPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       194 -----~~~~~~~~~~~-------~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                           ......+....       ......+..++.+||..||.+||++.+++..
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        322 CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence                 00000000000       1123456778889999999999999999863

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.87  E-value=3.3e-22  Score=158.69  Aligned_cols=182  Identities=18%  Similarity=0.255  Sum_probs=129.0

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|+||.++.    .++..+++|++....  ....+.+.+|+++++.++|||++++++.+...+..++++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            478889999999999443    458899999997653  35567789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCC-cCCCCccceeee----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPAN-KGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~-~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      +++++|.+++..... ...+++.....+                                                    
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence            999999988854210 011111111100                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|+||+|+++|++++|..||......  .+.    .... ......         .+
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~----~~~~-~~~~~~---------~~  224 (258)
T cd08215         161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--ELA----LKIL-KGQYPP---------IP  224 (258)
T ss_pred             cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH--HHH----HHHh-cCCCCC---------CC
Confidence                         012234677899999999999999999997544311  111    1111 111111         11


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+.+++.+||..+|++||++.++++
T Consensus       225 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         225 SQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            133456778888999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.87  E-value=3.1e-22  Score=161.82  Aligned_cols=186  Identities=20%  Similarity=0.309  Sum_probs=122.1

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|...+.||+|+||.++.    .+++.+|+|.+.... ......+.+|+.++.++. ||||+++++++..++..+++|||
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            566678999999999543    568899999997542 344567889999999996 99999999999998999999999


Q ss_pred             CCCCChhhhccC--CCCcCCCCccc-------------------------------------eeee--------------
Q 043709          111 MPNKSLDYFLFD--PANKGRLGWGT-------------------------------------RVRI--------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~--~~~~~~~~~~~-------------------------------------~~~i--------------  137 (253)
                      +.. ++.++...  ......++...                                     ...+              
T Consensus        85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  163 (288)
T cd06616          85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA  163 (288)
T ss_pred             ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence            874 44332100  00000000000                                     0000              


Q ss_pred             --------------eeec---CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 --------------YALH---GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 --------------~~~~---~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                    ....   ..++.++|||||||++||+++|+.||.....    ..... .... .+.     .+...
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~-~~~~-~~~-----~~~~~  232 (288)
T cd06616         164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQL-TQVV-KGD-----PPILS  232 (288)
T ss_pred             cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHH-hhhc-CCC-----CCcCC
Confidence                          0111   2477889999999999999999999864331    11111 0000 011     11122


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .......+..+.+++.+||+.+|++|||+++|++
T Consensus       233 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         233 NSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2222345667889999999999999999999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.87  E-value=3.3e-22  Score=161.25  Aligned_cols=192  Identities=17%  Similarity=0.162  Sum_probs=125.1

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      |++.+.||+|++|.+++    .++..||+|++....  ....+.+.+|+.+++.++||||+++++++.+.+..+++|||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            57788999999999544    478999999997542  233467889999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      . ++|.+++..... ..+.+.....+                                                      
T Consensus        81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~  158 (283)
T cd07835          81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH  158 (283)
T ss_pred             C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence            6 688887743221 01111110000                                                      


Q ss_pred             -----------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC--------C-------
Q 043709          138 -----------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG--------S-------  190 (253)
Q Consensus       138 -----------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~--------~-------  190 (253)
                                 ... ...++.++|+||||+++|+|++|..||...... ....... .......        .       
T Consensus       159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07835         159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIF-RTLGTPDEDVWPGVTSLPDYKPT  236 (283)
T ss_pred             cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH-HHhCCCChHHhhhhhhchhhhhh
Confidence                       111 123577899999999999999999988643321 1111110 0000000        0       


Q ss_pred             ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          191 LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......... ..........+.+++.+||+.+|.+||+++++++
T Consensus       237 ~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         237 FPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             cccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            000000000 0111223356888999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.87  E-value=1.1e-22  Score=161.46  Aligned_cols=182  Identities=19%  Similarity=0.195  Sum_probs=128.4

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|+||.+++    .+++.+|+|.+...  .......+.+|+.+++.++||||+++++++......++++||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            478889999999999543    46789999999754  234456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCC-cCCCCccceeee----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPAN-KGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~-~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      +++++|.+++.+... ...+.+.....+                                                    
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  160 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT  160 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence            999999988744111 011111110000                                                    


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++|+||+|+++|++++|..||......  .+...+     .....         ......
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~-----~~~~~---------~~~~~~  224 (256)
T cd08530         161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKV-----QRGKY---------PPIPPI  224 (256)
T ss_pred             ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH-----hcCCC---------CCCchh
Confidence                       011233566899999999999999999998643321  111111     11111         111224


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+.+++.+||..+|++||++.++++
T Consensus       225 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         225 YSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             hCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            4567888999999999999999999986

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.86  E-value=8.6e-22  Score=160.91  Aligned_cols=196  Identities=19%  Similarity=0.195  Sum_probs=124.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~  105 (253)
                      ..++|++.+.||+|+||.+++    .+++.||+|.+....  ......+.+|+.++++++|+||+++++++...  +..+
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            346899999999999999544    468899999997542  22234567899999999999999999998755  5689


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +||||+.+ +|.+++....  ..+.+.....+                                                
T Consensus        85 lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~  161 (309)
T cd07845          85 LVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP  161 (309)
T ss_pred             EEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence            99999974 7776663211  01111111000                                                


Q ss_pred             -----------------e-eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc-CCCcc------
Q 043709          138 -----------------Y-ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN-DGSLW------  192 (253)
Q Consensus       138 -----------------~-~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~------  192 (253)
                                       . .....++.++||||+||++|||++|..||.....  ............. .....      
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  239 (309)
T cd07845         162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQLLGTPNESIWPGFSDL  239 (309)
T ss_pred             cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChhhchhhhcc
Confidence                             0 1123467889999999999999999998864322  1111111010000 00000      


Q ss_pred             ------ccccccCC--CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 ------DLMDPMLQ--TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ------~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                            ........  ..........+.+++.+||+.||++|||+.+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         240 PLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             cccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                  00000000  0000113556788999999999999999999995

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.86  E-value=1.3e-22  Score=166.99  Aligned_cols=170  Identities=16%  Similarity=0.138  Sum_probs=114.9

Q ss_pred             CccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHH-HHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMM-LIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~-~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++...   .......+..|.. +++.++||||+++++.+...+..+++|||+.+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4689999999654    46889999999753   2233345566655 46778999999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.......+                                                        
T Consensus        81 ~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (325)
T cd05604          81 GELFFHLQRERS---FPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC  157 (325)
T ss_pred             CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence            999887732211   111000000                                                        


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|||||||++|||++|..||......  .+..    .... ...      ...    ....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~----~~~~-~~~------~~~----~~~~  220 (325)
T cd05604         158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--EMYD----NILH-KPL------VLR----PGAS  220 (325)
T ss_pred             CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--HHHH----HHHc-CCc------cCC----CCCC
Confidence                     123345788999999999999999999998643321  1111    1111 100      011    1233


Q ss_pred             HHHHHHhccccCCCCCCCCCHHH
Q 043709          209 KRYSNVDLFCFRENATDRPTMLE  231 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~~  231 (253)
                      ..+.+++.+|+..+|.+||++.+
T Consensus       221 ~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         221 LTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHHHHHHHHHhccCHHhcCCCCC
Confidence            45677888899999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.86  E-value=2.5e-22  Score=166.43  Aligned_cols=201  Identities=15%  Similarity=0.115  Sum_probs=125.4

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----  101 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----  101 (253)
                      ...++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            3457899999999999999554    46789999999754  223345678999999999999999999887543     


Q ss_pred             -CeeEEEEeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee-------
Q 043709          102 -GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI-------  137 (253)
Q Consensus       102 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i-------  137 (253)
                       ...+++++++ +++|..++....    ++.....                                    .+       
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~  166 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVKCQK----LSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR  166 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccce
Confidence             3578999988 578877763211    0000000                                    00       


Q ss_pred             -------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh----------c
Q 043709          138 -------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW----------N  187 (253)
Q Consensus       138 -------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~----------~  187 (253)
                                         .. ....++.++|||||||++|+|++|..||......  ...........          .
T Consensus       167 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  244 (343)
T cd07878         167 QADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI--DQLKRIMEVVGTPSPEVLKKIS  244 (343)
T ss_pred             ecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHhcc
Confidence                               01 1135778999999999999999999998643221  11111000000          0


Q ss_pred             CCCcccccc--ccCCCC----CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          188 DGSLWDLMD--PMLQTE----ASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       188 ~~~~~~~~~--~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      .........  +.....    ........+.+++.+||..||.+|||+.++++  .+....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~  305 (343)
T cd07878         245 SEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYH  305 (343)
T ss_pred             hhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccC
Confidence            000000000  000000    00012234678999999999999999999994  354443

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.86  E-value=3.3e-22  Score=166.50  Aligned_cols=201  Identities=15%  Similarity=0.136  Sum_probs=125.0

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----  101 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----  101 (253)
                      ...++|++.+.||+|+||.++.    .+++.||||.+...  .....+.+.+|+.+++.++||||+++++++...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            3457899999999999999654    46889999999754  233456788999999999999999999988643     


Q ss_pred             -CeeEEEEeeCCCCChhhhccCCCC-----------------------------c-----------CCCCccceeee---
Q 043709          102 -GVKILIYEHMPNKSLDYFLFDPAN-----------------------------K-----------GRLGWGTRVRI---  137 (253)
Q Consensus       102 -~~~~lv~e~~~~g~L~~~l~~~~~-----------------------------~-----------~~~~~~~~~~i---  137 (253)
                       ...+++|||+.+ ++.+.+.....                             .           ...++......   
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~  172 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  172 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence             357999999986 55443311000                             0           00000000000   


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhh-----------------hHh
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYV-----------------IWN  184 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~-----------------~~~  184 (253)
                                      ......++.++|||||||++|||++|+.||........ +....                 ...
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  251 (355)
T cd07874         173 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRN  251 (355)
T ss_pred             cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhhcHHHHH
Confidence                            12334578899999999999999999999865432110 00000                 000


Q ss_pred             hh-cCCCcc-----ccc-cccC--CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          185 LW-NDGSLW-----DLM-DPML--QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       185 ~~-~~~~~~-----~~~-~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      .. ......     ... +...  ...........+.+++.+||..||++|||+.++++.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            00 000000     000 0000  001111223567889999999999999999999963

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.86  E-value=2.9e-22  Score=164.62  Aligned_cols=169  Identities=14%  Similarity=0.096  Sum_probs=113.7

Q ss_pred             CccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHH-HHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMM-LIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++....   ......+..|.. +++.++||||+++++.+.+.+..++||||+++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4689999999654    467899999997531   223345556654 57788999999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCcccee------------------------------------ee--------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRV------------------------------------RI--------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i--------------------  137 (253)
                      |+|...+.....   +......                                    .+                    
T Consensus        81 ~~L~~~l~~~~~---~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05603          81 GELFFHLQRERC---FLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC  157 (321)
T ss_pred             CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc
Confidence            999877632110   0000000                                    00                    


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|||||||++|||++|..||.....  ..+..    ... ...          ...+....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~----~i~-~~~----------~~~~~~~~  220 (321)
T cd05603         158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--SQMYD----NIL-HKP----------LQLPGGKT  220 (321)
T ss_pred             CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--HHHHH----HHh-cCC----------CCCCCCCC
Confidence                     12234577899999999999999999999864321  11111    111 110          01111223


Q ss_pred             HHHHHHhccccCCCCCCCCCHH
Q 043709          209 KRYSNVDLFCFRENATDRPTML  230 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~  230 (253)
                      ..+.+++.+||+.+|.+||++.
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         221 VAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHHHHHHHccCCHhhcCCCC
Confidence            4677889999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.86  E-value=4.7e-22  Score=161.32  Aligned_cols=196  Identities=18%  Similarity=0.136  Sum_probs=123.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCe-----
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGV-----  103 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~-----  103 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|.+....  ......+.+|+.+++.++ ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            3688999999999999554    468899999987542  233467889999999995 6999999999987655     


Q ss_pred             eEEEEeeCCCCChhhhccCCCCc--CCCCccceeee--------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANK--GRLGWGTRVRI--------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~i--------------------------------------------  137 (253)
                      .+++|||+.+ +|.+++......  ..+.+.....+                                            
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence            8999999985 787776321111  11111111100                                            


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC-C-Ccc
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND-G-SLW  192 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~-~-~~~  192 (253)
                                             ......++.++|+||||+++|+|++|..||.......  ............ . ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  237 (295)
T cd07837         160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ--QLLHIFKLLGTPTEQVWP  237 (295)
T ss_pred             ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHHHhCCCChhhCc
Confidence                                   0011235778999999999999999999886432211  111110000000 0 000


Q ss_pred             c---ccc----ccCC----CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 D---LMD----PMLQ----TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ~---~~~----~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .   ...    +...    ..........+.+++.+||..||.+||++.+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0   000    0000    0111224566888999999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.86  E-value=3.3e-22  Score=164.50  Aligned_cols=175  Identities=16%  Similarity=0.107  Sum_probs=115.2

Q ss_pred             CccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHH-HHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMM-LIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|++....   ......+..|.. +++.++||||+++++.+...+..+++|||+.+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4689999999554    467889999997531   222334455544 56778999999999999999999999999999


Q ss_pred             CChhhhccCCCCcC------------------------------------------CCCccceeee--------------
Q 043709          114 KSLDYFLFDPANKG------------------------------------------RLGWGTRVRI--------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~------------------------------------------~~~~~~~~~i--------------  137 (253)
                      |+|.+++.......                                          ..++......              
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence            99988774311100                                          0000000000              


Q ss_pred             ------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHH
Q 043709          138 ------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRY  211 (253)
Q Consensus       138 ------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (253)
                            ......++.++|||||||++|||++|..||......  ......    .. ..          ..........+
T Consensus       161 ~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i----~~-~~----------~~~~~~~~~~~  223 (325)
T cd05602         161 EYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNI----LN-KP----------LQLKPNITNSA  223 (325)
T ss_pred             cccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--HHHHHH----Hh-CC----------cCCCCCCCHHH
Confidence                  123345778999999999999999999998643221  111111    00 00          01111234567


Q ss_pred             HHHhccccCCCCCCCCCHHHHH
Q 043709          212 SNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       212 ~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      .+++.+||+.+|.+||++.+.+
T Consensus       224 ~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         224 RHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             HHHHHHHcccCHHHCCCCCCCH
Confidence            7888889999999999977533

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.86  E-value=7.2e-22  Score=159.99  Aligned_cols=85  Identities=24%  Similarity=0.305  Sum_probs=70.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +++|.+.+.||+|+||.++.    .++..||+|.+.... ......+.+|+.+++.++|+||+++++++...+..+++||
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            46899999999999999654    468899999997542 3333467899999999999999999999999999999999


Q ss_pred             eCCCCChhhhc
Q 043709          110 HMPNKSLDYFL  120 (253)
Q Consensus       110 ~~~~g~L~~~l  120 (253)
                      |+. +++.+++
T Consensus        84 ~~~-~~l~~~~   93 (291)
T cd07870          84 YMH-TDLAQYM   93 (291)
T ss_pred             ccc-CCHHHHH
Confidence            996 5665554

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.86  E-value=1.9e-22  Score=159.43  Aligned_cols=191  Identities=16%  Similarity=0.143  Sum_probs=127.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec--C---eeEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--G---VKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~---~~~l  106 (253)
                      -.|.-.+.+|+|+||.|+.    .+++.||||+.-.+.+    .-.+|+.+|+.+.|||||++.-++...  .   .+.+
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            3567779999999999554    5689999999865432    345799999999999999998777643  2   4678


Q ss_pred             EEeeCCCCChhhhccCCCCcC-CCCccceeee------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKG-RLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~-~~~~~~~~~i------------------------------------------------  137 (253)
                      ||||++. +|.++++.-...+ .++... .++                                                
T Consensus       100 VleymP~-tL~~~~r~~~~~~~~mp~~~-iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~  177 (364)
T KOG0658|consen  100 VLEYMPE-TLYRVIRHYTRANQRMPLLE-IKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLV  177 (364)
T ss_pred             HHHhchH-HHHHHHHHHhhcCCCCceee-eHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeec
Confidence            9999995 9999886311110 011000 000                                                


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh--hc---------
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL--WN---------  187 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~--~~---------  187 (253)
                                         .+....|+.+.||||.||++.||+-|++-|.+.+. .+++...+ .-+  ..         
T Consensus       178 ~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIi-k~lG~Pt~e~I~~mn~  255 (364)
T KOG0658|consen  178 KGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEII-KVLGTPTREDIKSMNP  255 (364)
T ss_pred             cCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHH-HHhCCCCHHHHhhcCc
Confidence                               34556799999999999999999999988776433 33333322 111  11         


Q ss_pred             ---CCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          188 ---DGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       188 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         ....+++....+..-.......+..+++.+++..+|.+|.++.+++.
T Consensus       256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence               11111222222111133445678899999999999999999999883

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=5.3e-22  Score=157.29  Aligned_cols=179  Identities=21%  Similarity=0.275  Sum_probs=127.5

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccccc--ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG--QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|++.+.||+|++|.++.    .+++.|++|.+.....  ...+.+.+|+.+++.++|||++++++++.+.+..+++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            478889999999999554    3678999999986533  4567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +.+++|.+++....   .+++.....+                                                     
T Consensus        81 ~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  157 (254)
T cd06627          81 AENGSLRQIIKKFG---PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA  157 (254)
T ss_pred             CCCCcHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence            99999998874321   1111111100                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+||+|+++|++++|..||......    ...  +... ...         ....+.
T Consensus       158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~--~~~~-~~~---------~~~~~~  221 (254)
T cd06627         158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AAL--FRIV-QDD---------HPPLPE  221 (254)
T ss_pred             ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHH--HHHh-ccC---------CCCCCC
Confidence                        011123467899999999999999999987643211    000  1110 010         011122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+.+++.+||..+|++||++.+++.
T Consensus       222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         222 GISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            33456778889999999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.86  E-value=4.3e-22  Score=161.48  Aligned_cols=177  Identities=17%  Similarity=0.218  Sum_probs=123.3

Q ss_pred             ccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCC
Q 043709           40 MENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKS  115 (253)
Q Consensus        40 ~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~  115 (253)
                      ....||+|+||.++.    .+++.||||.+..........+.+|+.+++.++|+||+++++.+...+..+++|||+++++
T Consensus        24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  103 (292)
T cd06657          24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA  103 (292)
T ss_pred             hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence            346799999998543    4788999999875544556678999999999999999999999999999999999999999


Q ss_pred             hhhhccCCCCcCCCCcccee------------------------------------ee----------------------
Q 043709          116 LDYFLFDPANKGRLGWGTRV------------------------------------RI----------------------  137 (253)
Q Consensus       116 L~~~l~~~~~~~~~~~~~~~------------------------------------~i----------------------  137 (253)
                      |.+++....    ..+....                                    .+                      
T Consensus       104 L~~~~~~~~----~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  179 (292)
T cd06657         104 LTDIVTHTR----MNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGT  179 (292)
T ss_pred             HHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccC
Confidence            988763221    0000000                                    00                      


Q ss_pred             -------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHH
Q 043709          138 -------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKR  210 (253)
Q Consensus       138 -------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (253)
                             ......++.++|+||+|+++|++++|..||.....  ....... .     ...    .+...  ........
T Consensus       180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~-~-----~~~----~~~~~--~~~~~~~~  245 (292)
T cd06657         180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMI-R-----DNL----PPKLK--NLHKVSPS  245 (292)
T ss_pred             ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH-H-----hhC----CcccC--CcccCCHH
Confidence                   11123457789999999999999999999763321  1111111 0     000    00000  11123345


Q ss_pred             HHHHhccccCCCCCCCCCHHHHHH
Q 043709          211 YSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       211 ~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +.+++.+||+.+|.+||++.++++
T Consensus       246 l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         246 LKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHHHHhCCcccCcCHHHHhc
Confidence            778888999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.86  E-value=7e-22  Score=161.41  Aligned_cols=182  Identities=23%  Similarity=0.257  Sum_probs=123.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..|+..+.||+|+||.+++    .++..+|+|.+...   .....+.+.+|+.+++.++|+|++++++++...+..++||
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            4577788999999999543    46788999998642   2334467889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+. |++.+++.....  .+.......+                                                   
T Consensus        95 e~~~-~~l~~~~~~~~~--~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  171 (308)
T cd06634          95 EYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF  171 (308)
T ss_pred             EccC-CCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccc
Confidence            9997 577666532111  0111110000                                                   


Q ss_pred             ----------e---eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ----------Y---ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ----------~---~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                .   .....++.++|||||||++|+|++|..||......  ......     .....        .....
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~-----~~~~~--------~~~~~  236 (308)
T cd06634         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHI-----AQNES--------PALQS  236 (308)
T ss_pred             cCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--HHHHHH-----hhcCC--------CCcCc
Confidence                      0   01234677899999999999999999997543211  111101     00110        01111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ......+.+++.+||+.+|++||++++++..
T Consensus       237 ~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         237 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             ccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            2334567788999999999999999999865

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.86  E-value=1.5e-21  Score=157.07  Aligned_cols=177  Identities=17%  Similarity=0.205  Sum_probs=119.7

Q ss_pred             cccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      ||+|+||+++.    .+++.+|+|.+...   .....+.+..|+.+++.++||||+++++.+...+..+++|||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            68999999554    46889999999653   223345678899999999999999999999999999999999999999


Q ss_pred             hhhccCCCCcCCCCccceeee-----------------------------------------------------------
Q 043709          117 DYFLFDPANKGRLGWGTRVRI-----------------------------------------------------------  137 (253)
Q Consensus       117 ~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------------  137 (253)
                      .+++...... .+.......+                                                           
T Consensus        81 ~~~l~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05577          81 KYHIYNVGEP-GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG  159 (277)
T ss_pred             HHHHHHcCcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence            9888542211 1111111100                                                           


Q ss_pred             -----eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHH
Q 043709          138 -----YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYS  212 (253)
Q Consensus       138 -----~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (253)
                           ......++.++||||+|+++|+|++|+.||.........  ... ....    . .     .....+......+.
T Consensus       160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~~~-~~~~----~-~-----~~~~~~~~~~~~~~  226 (277)
T cd05577         160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK--EEL-KRRT----L-E-----MAVEYPDKFSPEAK  226 (277)
T ss_pred             cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH--HHH-Hhcc----c-c-----ccccCCccCCHHHH
Confidence                 112234667899999999999999999998654331110  000 0000    0 0     00111122345678


Q ss_pred             HHhccccCCCCCCCC-----CHHHHHH
Q 043709          213 NVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       213 ~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      +++.+||+.+|++||     ++.++++
T Consensus       227 ~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         227 DLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHHHHHccCChhHccCCCcccHHHHHh
Confidence            899999999999999     6666763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.86  E-value=9.4e-22  Score=160.04  Aligned_cols=196  Identities=19%  Similarity=0.152  Sum_probs=124.7

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecC----
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG----  102 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~----  102 (253)
                      ...++|++.+.||+|+||.+++    .+++.||+|.++...  ......+.+|+.+++.++||||+++++++.+..    
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~   83 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD   83 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence            3457899999999999999544    457899999997542  233456788999999999999999999987654    


Q ss_pred             ------eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------
Q 043709          103 ------VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------  137 (253)
Q Consensus       103 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------  137 (253)
                            .+++++||+++ ++...+.....  .+.+.....+                                       
T Consensus        84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~df  160 (302)
T cd07864          84 FKKDKGAFYLVFEYMDH-DLMGLLESGLV--HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADF  160 (302)
T ss_pred             ccccCCcEEEEEcccCc-cHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcc
Confidence                  78999999986 55554432110  0000000000                                       


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC-
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND-  188 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~-  188 (253)
                                                  ......++.++|||||||++|||++|+.||.....  ......+....... 
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~--~~~~~~~~~~~~~~~  238 (302)
T cd07864         161 GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE--LAQLELISRLCGSPC  238 (302)
T ss_pred             cccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCC
Confidence                                        01112357789999999999999999988864322  11111111111000 


Q ss_pred             -CCccccccc--------------cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 -GSLWDLMDP--------------MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 -~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       .....+...              ... ......+..+.+++.+||+.+|++||++.+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         239 PAVWPDVIKLPYFNTMKPKKQYRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             hhhcccccccccccccccccccccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             000000000              000 011123567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.86  E-value=1.1e-21  Score=158.03  Aligned_cols=192  Identities=16%  Similarity=0.140  Sum_probs=122.0

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhcc-CCCcceEeEEEEec--CeeEEEEe
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEK--GVKILIYE  109 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~--~~~~lv~e  109 (253)
                      |++.+.||+|+||.+++    .+++.||+|.+... .........+|+.++..+. ||||+++++++.+.  +.++++||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            56788999999999544    46889999998754 2222334567899999885 99999999999987  88999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+. |+|.+.+.....  .+.+.....+                                                    
T Consensus        81 ~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~  157 (282)
T cd07831          81 LMD-MNLYELIKGRKR--PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTE  157 (282)
T ss_pred             cCC-ccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCC
Confidence            997 477666633111  1111110000                                                    


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhH----------hhhcCCCccccc
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIW----------NLWNDGSLWDLM  195 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~  195 (253)
                                  ....+.++.++||||+||++|||++|..||......  ........          ............
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (282)
T cd07831         158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--DQIAKIHDVLGTPDAEVLKKFRKSRHMNYN  235 (282)
T ss_pred             CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--HHHHHHHHHcCCCCHHHHHhhccccccccc
Confidence                        011234577899999999999999999988653321  11111100          000000000000


Q ss_pred             cccCCC----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 DPMLQT----EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 ~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+....    ......+..+.+++.+||+.+|++||+++++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         236 FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            000000    001134578899999999999999999999886

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.86  E-value=3.9e-22  Score=166.35  Aligned_cols=86  Identities=22%  Similarity=0.351  Sum_probs=74.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++...   .......+.+|+.++..++||||+++++.+.+.+.+++||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            3688999999999999554    46889999999743   2344567889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhcc
Q 043709          109 EHMPNKSLDYFLF  121 (253)
Q Consensus       109 e~~~~g~L~~~l~  121 (253)
                      ||+++|+|.+++.
T Consensus        81 E~~~gg~L~~~l~   93 (360)
T cd05627          81 EFLPGGDMMTLLM   93 (360)
T ss_pred             eCCCCccHHHHHH
Confidence            9999999998874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.86  E-value=6e-22  Score=163.39  Aligned_cols=87  Identities=16%  Similarity=0.177  Sum_probs=73.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|.+.+.||+|+||.+++    .+++.||+|.+...   .....+.+.+|..++..++|+||+++++++.+.+..++||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            4789999999999999544    46788999999753   2233456788999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccC
Q 043709          109 EHMPNKSLDYFLFD  122 (253)
Q Consensus       109 e~~~~g~L~~~l~~  122 (253)
                      ||+++|+|.+++..
T Consensus        81 Ey~~gg~L~~~l~~   94 (331)
T cd05624          81 DYYVGGDLLTLLSK   94 (331)
T ss_pred             eCCCCCcHHHHHHH
Confidence            99999999998853

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.86  E-value=1.1e-21  Score=161.79  Aligned_cols=87  Identities=15%  Similarity=0.187  Sum_probs=73.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.+|+|++...   .....+.+..|+.++..++|+||+++++.+.+.+..++||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            4789999999999999554    45788999999642   2233455888999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccC
Q 043709          109 EHMPNKSLDYFLFD  122 (253)
Q Consensus       109 e~~~~g~L~~~l~~  122 (253)
                      ||+++|+|.+++.+
T Consensus        81 ey~~~g~L~~~l~~   94 (332)
T cd05623          81 DYYVGGDLLTLLSK   94 (332)
T ss_pred             eccCCCcHHHHHHH
Confidence            99999999999853

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.86  E-value=8.3e-22  Score=162.75  Aligned_cols=207  Identities=12%  Similarity=0.097  Sum_probs=131.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe----cCee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE----KGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~----~~~~  104 (253)
                      ..+|++.+.||+|+||.++.    .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++..    ....
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            36899999999999998443    56889999999754  23445678899999999999999999988753    3568


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      +++|||+. |+|.+++.....   +++.....+                                               
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  159 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSDQP---LTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSS  159 (334)
T ss_pred             EEEEehhh-hhHHHHhccCCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence            99999996 588887732211   111000000                                               


Q ss_pred             ----------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh---------
Q 043709          138 ----------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL---------  185 (253)
Q Consensus       138 ----------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~---------  185 (253)
                                            .. ....++.++|||||||++|||++|+.||.......  ....+....         
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~--~~~~~~~~~g~~~~~~~~  237 (334)
T cd07855         160 SPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH--QLKLILSVLGSPSEEVLN  237 (334)
T ss_pred             cCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH--HHHHHHHHhCCChhHhhh
Confidence                                  00 11346788999999999999999999986543211  000000000         


Q ss_pred             -hcCCCccccccc-cCCC-----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcccCCCCCC
Q 043709          186 -WNDGSLWDLMDP-MLQT-----EASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIVNLPYPQ  247 (253)
Q Consensus       186 -~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~~~~~~~  247 (253)
                       ............ ....     .........+.+++.+||+.+|++||++++++.  .++........+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~~  308 (334)
T cd07855         238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEPT  308 (334)
T ss_pred             hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCccccc
Confidence             000000000000 0000     011123567888999999999999999999884  5655554444443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.86  E-value=3.3e-21  Score=154.33  Aligned_cols=186  Identities=17%  Similarity=0.164  Sum_probs=122.1

Q ss_pred             HHHHHHHhcCccccCcc--ccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEe
Q 043709           28 LASISAATDNFSMENKL--GEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVE  100 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~i--g~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~  100 (253)
                      ..+.....++|++.+.+  |+|+||.+++    .++..+|+|.+........     |+.....+ +||||+++++.+..
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~   80 (267)
T PHA03390          6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT   80 (267)
T ss_pred             HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence            34444445678887877  9999999443    5678899999875321111     22222222 69999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+..++||||+++|+|.+++....   .+.+.....+                                           
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~  157 (267)
T PHA03390         81 LKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLC  157 (267)
T ss_pred             CCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence            999999999999999999884321   1111111111                                           


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         ......++.++||||+|+++|||++|..||..............  ...  .       . 
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~--~-------~-  225 (267)
T PHA03390        158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLL--KRQ--Q-------K-  225 (267)
T ss_pred             eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHH--Hhh--c-------c-
Confidence                               12234577889999999999999999999874332221111111  000  0       0 


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCC-HHHHHH
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPT-MLEIVS  234 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs-~~~il~  234 (253)
                       ...........+.+++.+||+.+|.+||+ ++++++
T Consensus       226 -~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        226 -KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             -cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence             01111234567888999999999999996 688874

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=1.4e-21  Score=156.13  Aligned_cols=180  Identities=20%  Similarity=0.230  Sum_probs=123.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-----ccccHHHHHHHHHHHHhccCCCcceEeEEEEec--Cee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-----SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~  104 (253)
                      .+|.+.+.||+|+||.++.    .++..||+|.+...     .......+.+|+.+++.++||||+++++++.+.  +..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            4789999999999999544    46889999988532     223446788999999999999999999998764  468


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++++||+++++|.+++.+...   +.......+                                               
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~---l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  158 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGA---LTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT  158 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence            899999999999888743211   000000000                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++|+|||||++|++++|+.||......     .......          .
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~----------~  223 (264)
T cd06653         159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM-----AAIFKIA----------T  223 (264)
T ss_pred             ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH-----HHHHHHH----------c
Confidence                                 111233567899999999999999999998633211     1110000          0


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .......+......+.+++.+||. +|.+||++.+++.
T Consensus       224 ~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         224 QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            001111223344667888888999 5799999998775

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.85  E-value=5.3e-22  Score=164.11  Aligned_cols=198  Identities=16%  Similarity=0.114  Sum_probs=126.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----Ce
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----GV  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~~  103 (253)
                      .+.|.+.+.||+|+||.++.    .+++.||||.+...  .......+.+|+.+++.++||||+++++++...     ..
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            35799999999999999544    56889999998753  233455678899999999999999999987644     34


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e----------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I----------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i----------  137 (253)
                      .++++||+. ++|.+++.....   +.......                                    +          
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~~~---l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  159 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSSQT---LSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTS  159 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcCCC---CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence            899999997 678776632110   00000000                                    0          


Q ss_pred             -------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh-----------
Q 043709          138 -------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW-----------  186 (253)
Q Consensus       138 -------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~-----------  186 (253)
                                         .. ....++.++|||||||++|+|++|..||.......  ..... ....           
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~-~~~~~~~~~~~~~~~  236 (337)
T cd07858         160 EKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH--QLKLI-TELLGSPSEEDLGFI  236 (337)
T ss_pred             CCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH--HHHHH-HHHhCCCChHHhhhc
Confidence                               01 11346788999999999999999999986432110  00000 0000           


Q ss_pred             cCCCcc-------ccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--Hhhcc
Q 043709          187 NDGSLW-------DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNEI  240 (253)
Q Consensus       187 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~~  240 (253)
                      ......       ........ ......+..+.+++.+||+.+|++|||++++++.  ++...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         237 RNEKARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             CchhhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            000000       00000000 0112345668899999999999999999999954  66544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.85  E-value=5.2e-21  Score=154.13  Aligned_cols=175  Identities=17%  Similarity=0.129  Sum_probs=115.5

Q ss_pred             ccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHh---ccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           43 KLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAK---LQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        43 ~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~---l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .||+|+||.+++    .+++.+|+|.+....   ......+.+|..+++.   ..||||+.+++.+...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999654    457899999997542   1222334455544443   479999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|..++....   .+.+.....+                                                       
T Consensus        81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (279)
T cd05633          81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (279)
T ss_pred             CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence            999988773221   1111110000                                                       


Q ss_pred             --------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 --------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 --------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                              ... ...++.++||||+||++|||++|..||..............   .           .......+...+
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~-----------~~~~~~~~~~~~  223 (279)
T cd05633         158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM---T-----------LTVNVELPDSFS  223 (279)
T ss_pred             CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH---h-----------hcCCcCCccccC
Confidence                    111 23467889999999999999999999865433221111111   0           001111122344


Q ss_pred             HHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          209 KRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      ..+.+++.+||..||++||     +++++++
T Consensus       224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            6778888999999999999     5998886

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.85  E-value=1.8e-21  Score=157.11  Aligned_cols=192  Identities=18%  Similarity=0.133  Sum_probs=125.2

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeEEEEe
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKILIYE  109 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~lv~e  109 (253)
                      |++.+.||+|++|.+++    .+++.+|+|.+....  ....+.+.+|+.+++.++|||++++++++...  +..++++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            56788999999999554    357899999998652  34456788999999999999999999999987  88999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++ +|..++.....  .+.+.....+                                                    
T Consensus        81 ~~~~-~l~~~~~~~~~--~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~  157 (287)
T cd07840          81 YMDH-DLTGLLDSPEV--KFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD  157 (287)
T ss_pred             cccc-cHHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence            9984 88777643210  1111110000                                                    


Q ss_pred             --------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCcccc------
Q 043709          138 --------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLWDL------  194 (253)
Q Consensus       138 --------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------  194 (253)
                                    .. ....++.++||||||+++|||++|..||......  ...........  ........      
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07840         158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQLEKIFELCGSPTDENWPGVSKLPWF  235 (287)
T ss_pred             ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCchhhccccccchhh
Confidence                          01 1224678899999999999999999998644321  11111101000  00000000      


Q ss_pred             --cc------ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          195 --MD------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       195 --~~------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        ..      ..........++..+.+++.+||+.+|++||++.++++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         236 ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence              00      00000001112567889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.85  E-value=1.5e-21  Score=159.81  Aligned_cols=179  Identities=21%  Similarity=0.280  Sum_probs=121.6

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      |...+.||+|+||+++.    .+++.|++|.+...   .....+.+.+|+.+++.++|||++++++++.+.+..+++|||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            66667899999999554    46889999998743   223345788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +. |++.+++.....  .+.+.....+                                                     
T Consensus       103 ~~-~~l~~~l~~~~~--~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~  179 (313)
T cd06633         103 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG  179 (313)
T ss_pred             CC-CCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence            97 466665532110  1111110000                                                     


Q ss_pred             --------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 --------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 --------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                              ..   ....++.++|||||||++|+|++|..||......  ......   .  .......        ....
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--~~~~~~---~--~~~~~~~--------~~~~  244 (313)
T cd06633         180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHI---A--QNDSPTL--------QSNE  244 (313)
T ss_pred             cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHH---H--hcCCCCC--------Cccc
Confidence                    01   1245677899999999999999999997643221  111111   0  0111111        1112


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+.+++.+||+.+|.+||++.+++.
T Consensus       245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         245 WTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2345778888999999999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.85  E-value=6.2e-22  Score=164.01  Aligned_cols=203  Identities=15%  Similarity=0.062  Sum_probs=126.8

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec---------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK---------  101 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~---------  101 (253)
                      ..+|.+.+.||.|+||.+++    .+++.||+|.+........+.+.+|+.+++.++||||+++++++...         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG   83 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence            36799999999999999554    56889999999766556667789999999999999999999776543         


Q ss_pred             -----CeeEEEEeeCCCCChhhhccCCCCc------------------------------------------CCCCccce
Q 043709          102 -----GVKILIYEHMPNKSLDYFLFDPANK------------------------------------------GRLGWGTR  134 (253)
Q Consensus       102 -----~~~~lv~e~~~~g~L~~~l~~~~~~------------------------------------------~~~~~~~~  134 (253)
                           ...+++|||+. ++|.+++......                                          ...++...
T Consensus        84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~  162 (342)
T cd07854          84 SLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLA  162 (342)
T ss_pred             cccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccc
Confidence                 35799999997 5787655211100                                          00000000


Q ss_pred             ee-------------------e-----eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC--
Q 043709          135 VR-------------------I-----YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND--  188 (253)
Q Consensus       135 ~~-------------------i-----~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~--  188 (253)
                      ..                   .     ......++.++|||||||++|+|++|..||........  ...........  
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~  240 (342)
T cd07854         163 RIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ--MQLILESVPVVRE  240 (342)
T ss_pred             eecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCh
Confidence            00                   0     01123466789999999999999999999864432110  00000000000  


Q ss_pred             -------CCcccccc-ccCCC-----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          189 -------GSLWDLMD-PMLQT-----EASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       189 -------~~~~~~~~-~~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                             ........ .....     .........+.+++.+||+.||.+|||+++++  ..++...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~  307 (342)
T cd07854         241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS  307 (342)
T ss_pred             HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence                   00000000 00000     00112335677899999999999999999998  4565443

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.85  E-value=1.8e-21  Score=156.88  Aligned_cols=195  Identities=16%  Similarity=0.114  Sum_probs=123.0

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEeeC
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      |++.+.||+|++|.++.    .+++.|+||.+.... ........+|+..++.++ ||||+++++++..++..+++|||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            57789999999999554    357889999987542 222334567999999998 999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                       +|+|.+++..... ..+.+.....+                                                      
T Consensus        81 -~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  158 (283)
T cd07830          81 -EGNLYQLMKDRKG-KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY  158 (283)
T ss_pred             -CCCHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence             7899887743220 01111111111                                                      


Q ss_pred             ----------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcch--hh--------hhhHhhhcCCCcccccc
Q 043709          138 ----------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL--LG--------YVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ----------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~~  196 (253)
                                .. ....++.++|+||||+++|||++|..||..........  ..        .+...............
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07830         159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP  238 (283)
T ss_pred             CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence                      01 12335778999999999999999998875443211000  00        00000000000000000


Q ss_pred             ccCC---CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQ---TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....   ..........+.+++.+||+.+|++||++++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            0000   0001112356889999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.85  E-value=5.2e-22  Score=158.14  Aligned_cols=182  Identities=19%  Similarity=0.249  Sum_probs=121.5

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc-----ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-----SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .|.+.+.||+|+||.+++    ..+..+++|.++..     .......+..|+.+++.++||||+++++.+.+....+++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            478889999999999654    33445666665432     223344677899999999999999999999988899999


Q ss_pred             EeeCCCCChhhhccCCC-CcCCCCccceeee-------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPA-NKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +||+++++|.+++.... ....+++.....+                                                 
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~  160 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCD  160 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcc
Confidence            99999999988764210 0011111110000                                                 


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ......++.++|+||||+++|+|++|..||.....  .....    ... .+.         ...
T Consensus       161 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~----~~~-~~~---------~~~  224 (260)
T cd08222         161 LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVL----RIV-EGP---------TPS  224 (260)
T ss_pred             cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHH----HHH-cCC---------CCC
Confidence                           01122356689999999999999999998753211  11110    100 111         111


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+......+.+++.+||..+|++||++.++++
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         225 LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            12344567888999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.85  E-value=3.9e-22  Score=164.81  Aligned_cols=210  Identities=15%  Similarity=0.088  Sum_probs=130.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----Cee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----GVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~~~  104 (253)
                      .++|++.+.||+|+||.++.    .+++.||+|.+... .......+.+|+.+++.++||||+++++++...     ..+
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            46899999999999999544    47889999999643 233446688999999999999999999987644     358


Q ss_pred             EEEEeeCCCCChhhhccCCCCc-----------------------------------------CCCCccceee-------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK-----------------------------------------GRLGWGTRVR-------  136 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~-----------------------------------------~~~~~~~~~~-------  136 (253)
                      ++++||+.+ +|..++......                                         ...++.....       
T Consensus        84 ~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~  162 (336)
T cd07849          84 YIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH  162 (336)
T ss_pred             EEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccc
Confidence            999999974 776554221100                                         0000000000       


Q ss_pred             ------------e----e-eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC---Ccc----
Q 043709          137 ------------I----Y-ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG---SLW----  192 (253)
Q Consensus       137 ------------i----~-~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~----  192 (253)
                                  .    . .....++.++||||+||++|+|++|+.||.......  ..... .......   ...    
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~  239 (336)
T cd07849         163 TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH--QLNLI-LGVLGTPSQEDLNCIIS  239 (336)
T ss_pred             cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH-HHHcCCCCHHHHHHhhc
Confidence                        0    0 112346778999999999999999999985432110  00000 0000000   000    


Q ss_pred             -------ccccccCCCC---CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HhhcccCCCCCCC
Q 043709          193 -------DLMDPMLQTE---ASYPILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNEIVNLPYPQQ  248 (253)
Q Consensus       193 -------~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~~~~~~~~~~  248 (253)
                             ..........   ........+.+++.+||+.+|++||++.++++.  ++......+.|-.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~  307 (336)
T cd07849         240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVA  307 (336)
T ss_pred             hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcccC
Confidence                   0000000000   001224568889999999999999999999965  7777655444433

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.85  E-value=1.4e-21  Score=160.91  Aligned_cols=202  Identities=14%  Similarity=0.145  Sum_probs=127.3

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe-cCee
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-KGVK  104 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-~~~~  104 (253)
                      ...+++|++.+.||+|+||.+++    .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++.. .+..
T Consensus         6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            34667899999999999999544    47889999988643  23345678899999999999999999999875 4678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCC-----------------------------------------CCccceee-------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGR-----------------------------------------LGWGTRVR-------  136 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~-----------------------------------------~~~~~~~~-------  136 (253)
                      ++++||+. ++|..+++.......                                         .++.....       
T Consensus        86 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~  164 (328)
T cd07856          86 YFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTG  164 (328)
T ss_pred             EEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCC
Confidence            99999985 688777632110000                                         00000000       


Q ss_pred             ------e----eeec-CccccccceeehhHHHHHHHhCCCCcCcCCCCCc-chh--------hhhhHhhhcCCCcccccc
Q 043709          137 ------I----YALH-GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-TLL--------GYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       137 ------i----~~~~-~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~  196 (253)
                            .    .... ..++.++|||||||++|++++|..||........ ...        ..+ ..........+...
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  243 (328)
T cd07856         165 YVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDV-INTICSENTLRFVQ  243 (328)
T ss_pred             CcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH-HHhccchhhHHHHh
Confidence                  0    1112 3577889999999999999999998864432100 000        000 00000000000100


Q ss_pred             cc-CCCCC-----CHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          197 PM-LQTEA-----SYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       197 ~~-~~~~~-----~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      .. .....     .......+.+++.+||+.+|++||++++++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00 00000     01234678889999999999999999999853

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.85  E-value=2.8e-21  Score=159.80  Aligned_cols=202  Identities=18%  Similarity=0.119  Sum_probs=128.0

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEec--Cee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEK--GVK  104 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~--~~~  104 (253)
                      ..++|++.+.||+|+||.+++    .+++.+|+|++...  .......+.+|+.+++++ +||||+++++++...  ...
T Consensus         5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~   84 (337)
T cd07852           5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI   84 (337)
T ss_pred             hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence            346799999999999999543    36789999998643  233445678899999999 999999999988643  468


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+. ++|..++....    +.+.....+                                               
T Consensus        85 ~lv~e~~~-~~L~~~~~~~~----~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~  159 (337)
T cd07852          85 YLVFEYME-TDLHAVIRANI----LEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE  159 (337)
T ss_pred             EEEecccc-cCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence            99999998 58887763321    111100000                                               


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh--------
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL--------  185 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~--------  185 (253)
                                              ......++.++||||||+++|+|++|..||.......  .........        
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~  237 (337)
T cd07852         160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN--QLEKIIEVIGPPSAEDI  237 (337)
T ss_pred             ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCCHHHH
Confidence                                    0112345678999999999999999999986433211  000000000        


Q ss_pred             --hcCCCcccccc----ccC--CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HhhcccC
Q 043709          186 --WNDGSLWDLMD----PML--QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNEIVN  242 (253)
Q Consensus       186 --~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~~~~  242 (253)
                        ...........    ...  ...........+.+++.+||+.+|++|||+.++++.  ++.....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~  304 (337)
T cd07852         238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP  304 (337)
T ss_pred             HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccC
Confidence              00000000000    000  001111234578889999999999999999999953  5555433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.85  E-value=3e-21  Score=160.59  Aligned_cols=200  Identities=14%  Similarity=0.136  Sum_probs=124.7

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec------
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK------  101 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~------  101 (253)
                      ..++|+..+.||+|+||.++.    .+++.||+|.+...  .....+.+.+|+.+++.++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            447899999999999999544    57889999998643  334456788999999999999999999988643      


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCc----------------------------------------CCCCccceeee----
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANK----------------------------------------GRLGWGTRVRI----  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~----------------------------------------~~~~~~~~~~i----  137 (253)
                      ...++||||+.+ +|.+.+......                                        ...++......    
T Consensus        94 ~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~  172 (353)
T cd07850          94 QDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  172 (353)
T ss_pred             CcEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC
Confidence            357999999974 776654211000                                        00000000000    


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-------------chhhhh---hHhhh
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-------------TLLGYV---IWNLW  186 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-------------~~~~~~---~~~~~  186 (253)
                                     ...+..++.++|||||||++|+|++|+.||........             .+....   .....
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (353)
T cd07850         173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYV  252 (353)
T ss_pred             CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHh
Confidence                           12334577889999999999999999999864432100             000000   00000


Q ss_pred             cCC------Cccccccc----cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          187 NDG------SLWDLMDP----MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       187 ~~~------~~~~~~~~----~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...      ........    .............+.+++.+||+.||++|||+.++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         253 ENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             hcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            000      00000000    0001111233556788999999999999999999993

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=3.1e-21  Score=153.66  Aligned_cols=179  Identities=13%  Similarity=0.071  Sum_probs=116.2

Q ss_pred             CccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHH-hccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIA-KLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++    .+++.||+|.+....   ......+..|..++. ...||||+++++++...+.+++++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5799999999554    367899999997542   122234455555444 45899999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|.+++.....   ++......+                                                        
T Consensus        82 ~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (260)
T cd05611          82 GDCASLIKTLGG---LPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD  158 (260)
T ss_pred             CCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence            999998843221   111111000                                                        


Q ss_pred             -----eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHH
Q 043709          138 -----YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYS  212 (253)
Q Consensus       138 -----~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (253)
                           ......++.++||||||+++|++++|..||.....  .......    . ....      .........++..+.
T Consensus       159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~----~-~~~~------~~~~~~~~~~~~~~~  225 (260)
T cd05611         159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--DAVFDNI----L-SRRI------NWPEEVKEFCSPEAV  225 (260)
T ss_pred             ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----H-hccc------CCCCcccccCCHHHH
Confidence                 11123357789999999999999999999864322  1111111    0 0000      001111113446788


Q ss_pred             HHhccccCCCCCCCCCHHHHHHHH
Q 043709          213 NVDLFCFRENATDRPTMLEIVSML  236 (253)
Q Consensus       213 ~l~~~cl~~~p~~RPs~~~il~~L  236 (253)
                      +++.+||..+|++||++.++.+.|
T Consensus       226 ~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         226 DLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHHHHHccCCHHHccCCCcHHHHH
Confidence            899999999999999776554443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.85  E-value=2.8e-21  Score=156.76  Aligned_cols=195  Identities=16%  Similarity=0.144  Sum_probs=124.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++.+.||+|++|.+++    .+++.||+|.+....  ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            4789999999999999544    468899999986542  2334678899999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCcc-------------------------------------ceeee---------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWG-------------------------------------TRVRI---------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~-------------------------------------~~~~i---------------  137 (253)
                      |++ ++|.+++...... .....                                     ..+.+               
T Consensus        82 ~~~-~~l~~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~  159 (294)
T PLN00009         82 YLD-LDLKKHMDSSPDF-AKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT  159 (294)
T ss_pred             ccc-ccHHHHHHhCCCC-CcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence            996 4666554221100 00000                                     00000               


Q ss_pred             --------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC-CCc-------cc-
Q 043709          138 --------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND-GSL-------WD-  193 (253)
Q Consensus       138 --------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~-  193 (253)
                                    .. ....++.++||||+|+++|+|++|..||....... .+.... ...... ...       .. 
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  237 (294)
T PLN00009        160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIF-RILGTPNEETWPGVTSLPDY  237 (294)
T ss_pred             cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HHhCCCChhhccccccchhh
Confidence                          01 11245678999999999999999999886433211 111000 000000 000       00 


Q ss_pred             -cccccCCCC----CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          194 -LMDPMLQTE----ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       194 -~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       ...+.....    ........+.+++.+||+.+|++||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        238 KSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             hhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence             000000000    01123456778888999999999999999985

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.85  E-value=1.5e-21  Score=157.32  Aligned_cols=192  Identities=19%  Similarity=0.167  Sum_probs=125.8

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      |++.+.||.|++|.+++    .+++.+++|.+....  ......+.+|+.+++.++|+||+++++++...+..++++||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            56778999999999544    468889999987542  234567889999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      ++ +|.+++....  ..+++.....+                                                      
T Consensus        81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~  157 (283)
T cd05118          81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH  157 (283)
T ss_pred             CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence            85 7877764321  11111111111                                                      


Q ss_pred             -----------eeec-CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc--CCCcccccc-------
Q 043709          138 -----------YALH-GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN--DGSLWDLMD-------  196 (253)
Q Consensus       138 -----------~~~~-~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------  196 (253)
                                 .... ..++.++|+||+|+++|++++|+.||......  ............  .........       
T Consensus       158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T cd05118         158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI--DQLFKIFRTLGTPDPEVWPKFTSLARNYKF  235 (283)
T ss_pred             ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCchHhcccchhhhhhhhh
Confidence                       0111 25678899999999999999999887543321  111111000000  000000000       


Q ss_pred             --ccC----CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 --PML----QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 --~~~----~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        +..    ...........+.+++.+||+.||.+||++.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         236 SFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence              000    01112234567889999999999999999999885

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.85  E-value=1.1e-20  Score=154.93  Aligned_cols=77  Identities=16%  Similarity=0.217  Sum_probs=60.6

Q ss_pred             cCccccccccceEe------eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe--cCeeEEEEeeCC
Q 043709           41 ENKLGEGGFGPGKL------LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVKILIYEHMP  112 (253)
Q Consensus        41 ~~~ig~G~fg~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~~lv~e~~~  112 (253)
                      .+.||+|+||.+++      .+++.||+|.+...  .....+.+|+.+++.++||||+++++++..  +...+++|||+.
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE   83 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence            46899999999655      24578999998753  223457899999999999999999998864  456899999987


Q ss_pred             CCChhhhc
Q 043709          113 NKSLDYFL  120 (253)
Q Consensus       113 ~g~L~~~l  120 (253)
                      + +|..++
T Consensus        84 ~-~l~~~~   90 (317)
T cd07868          84 H-DLWHII   90 (317)
T ss_pred             C-CHHHHH
Confidence            4 665554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.84  E-value=3.5e-22  Score=151.89  Aligned_cols=186  Identities=20%  Similarity=0.182  Sum_probs=125.8

Q ss_pred             ccccCccccccccc----eEeeCCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeC
Q 043709           38 FSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        38 ~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      ++....||.|+||+    .++.+|+.+|||+++.. ...+.++++.|..+..+- ..||||++||.+..++..||.||++
T Consensus        66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM  145 (361)
T KOG1006|consen   66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM  145 (361)
T ss_pred             HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence            34447899999999    55689999999999865 345667899999877766 6899999999999999999999999


Q ss_pred             CCCChhhhcc-------CCCCcC---------------------------------------------------------
Q 043709          112 PNKSLDYFLF-------DPANKG---------------------------------------------------------  127 (253)
Q Consensus       112 ~~g~L~~~l~-------~~~~~~---------------------------------------------------------  127 (253)
                      .- +|+.+..       ..-+..                                                         
T Consensus       146 d~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAk  224 (361)
T KOG1006|consen  146 DI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAK  224 (361)
T ss_pred             hh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHh
Confidence            73 6655431       000000                                                         


Q ss_pred             -----CCCccceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          128 -----RLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       128 -----~~~~~~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                           -.++..+.++.-....|+-++||||||++|||+.||..|+......-.++..      ...+..+.+..+.-.  
T Consensus       225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~------Vv~gdpp~l~~~~~~--  296 (361)
T KOG1006|consen  225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQ------VVIGDPPILLFDKEC--  296 (361)
T ss_pred             hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHH------HHcCCCCeecCcccc--
Confidence                 0111111111223335889999999999999999999998755442111111      112333333322221  


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        .+....+.+++..|+..|-+.||+..++..
T Consensus       297 --~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  297 --VHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             --cccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence              234456677777799999999999999774

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.84  E-value=6.2e-21  Score=156.18  Aligned_cols=83  Identities=18%  Similarity=0.338  Sum_probs=68.0

Q ss_pred             CccccCccccccccceEe----e--CCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeE
Q 043709           37 NFSMENKLGEGGFGPGKL----L--NGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKI  105 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~  105 (253)
                      .|++.+.||+|+||.+++    .  .+..||+|.+....   ....+.+.+|+.+++.++||||+++++++...  +.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            477889999999999444    3  57899999998632   34456788999999999999999999999988  7899


Q ss_pred             EEEeeCCCCChhhhc
Q 043709          106 LIYEHMPNKSLDYFL  120 (253)
Q Consensus       106 lv~e~~~~g~L~~~l  120 (253)
                      +||||+.+ +|.+++
T Consensus        81 lv~e~~~~-~l~~~~   94 (316)
T cd07842          81 LLFDYAEH-DLWQII   94 (316)
T ss_pred             EEEeCCCc-CHHHHH
Confidence            99999985 565544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.84  E-value=3e-21  Score=156.08  Aligned_cols=187  Identities=15%  Similarity=0.119  Sum_probs=125.9

Q ss_pred             CccccCccccccccceEe-------eCCCEEEEEEecccc----cccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCee
Q 043709           37 NFSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQS----GQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~  104 (253)
                      +|++.+.||+|++|.++.       .+++.||||.+....    ....+.+..|+.++..+ +||||+++++.+..++..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            478889999999999554       356789999987431    23345688999999999 599999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e-----------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I-----------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i-----------  137 (253)
                      ++||||+.+|+|.+++.....   +.+.....                                    +           
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  157 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREH---FTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA  157 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCC---cCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence            999999999999888743211   11100000                                    0           


Q ss_pred             -------------------eeecC--ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 -------------------YALHG--VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 -------------------~~~~~--~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                         .....  ..+.++|+||||+++|||++|..||.......  ............       .
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~-------~  228 (288)
T cd05583         158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILKS-------K  228 (288)
T ss_pred             ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHcc-------C
Confidence                               00011  14678999999999999999999986432211  001110111100       0


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                          ..........+.+++.+||+.+|++|||+.++.+.|+..
T Consensus       229 ----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         229 ----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             ----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence                011112334577888899999999999988887766654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.84  E-value=3.3e-23  Score=185.47  Aligned_cols=188  Identities=21%  Similarity=0.251  Sum_probs=134.2

Q ss_pred             HHhcCccccCccccccccc----eEeeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           33 AATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..+-+|.-...||.|.||+    +...+|+..|+|.+.-+  .........+|..++..+.|||+|+++|+-.+...++|
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence            4445788888999999999    44578999999998754  33444567899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCC------------------------------------------CCccceeee-------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGR------------------------------------------LGWGTRVRI-------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~------------------------------------------~~~~~~~~i-------  137 (253)
                      .||||.+|+|.+++..+.....                                          .+++..+.+       
T Consensus      1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred             HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence            9999999999999854321110                                          011111111       


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          -.....-.-+.||||+||+..||+||++||.-.+.. -.+..++     ..+..      
T Consensus      1392 ~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~aIMy~V-----~~gh~------ 1459 (1509)
T KOG4645|consen 1392 PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WAIMYHV-----AAGHK------ 1459 (1509)
T ss_pred             CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-hHHHhHH-----hccCC------
Confidence                                011123445789999999999999999998643321 1111111     12222      


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                         +..+..+...-.+++..|+..||+.|-++.|+++.
T Consensus      1460 ---Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1460 ---PQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             ---CCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence               23333466777888888999999999999888864

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.84  E-value=1.1e-20  Score=156.65  Aligned_cols=212  Identities=15%  Similarity=0.110  Sum_probs=134.0

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC-----
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-----  102 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-----  102 (253)
                      ..++|++.+.||+|+||.++.    .++..||||++...  .....+.+.+|+.+++.++||||+++++++...+     
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            456899999999999999544    46889999998643  2233456889999999999999999999987553     


Q ss_pred             -eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------
Q 043709          103 -VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------  137 (253)
Q Consensus       103 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------  137 (253)
                       ..+++|+|+ +++|..++....    +++.....+                                            
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~~~----l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~  167 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKHEK----LSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ  167 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccc
Confidence             358999998 678877763211    111100000                                            


Q ss_pred             ------------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh---------HhhhcCC
Q 043709          138 ------------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI---------WNLWNDG  189 (253)
Q Consensus       138 ------------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~---------~~~~~~~  189 (253)
                                        ... ...++.++|+||||+++|++++|..||...... ........         .......
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T cd07880         168 TDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSKEFVQKLQSE  246 (343)
T ss_pred             cccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHhhcch
Confidence                              001 123667899999999999999999998644321 00000000         0000000


Q ss_pred             Cccccccc--cCC----CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcccCCCCCCCCCC
Q 043709          190 SLWDLMDP--MLQ----TEASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEIVNLPYPQQSAF  251 (253)
Q Consensus       190 ~~~~~~~~--~~~----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~~~~~~~~~~~~  251 (253)
                      ........  ...    ..........+.+++.+|+..||++|||+.+++  ..++........+..|+|
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~~~~~~  316 (343)
T cd07880         247 DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETEAPPY  316 (343)
T ss_pred             hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccccCCCCc
Confidence            00000000  000    001112344678899999999999999999999  567766655555555555

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.84  E-value=4.3e-21  Score=156.66  Aligned_cols=85  Identities=22%  Similarity=0.303  Sum_probs=67.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecC------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG------  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~------  102 (253)
                      -++|++.+.||+|+||.+++    .+++.||||.+....  ......+.+|+.+++.++||||+++++++...+      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            35799999999999999554    468899999986432  222345678999999999999999999987654      


Q ss_pred             --eeEEEEeeCCCCChhhhc
Q 043709          103 --VKILIYEHMPNKSLDYFL  120 (253)
Q Consensus       103 --~~~lv~e~~~~g~L~~~l  120 (253)
                        ..+++|||+.+ +|.+++
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l  109 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLL  109 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHH
Confidence              45999999974 776665

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.84  E-value=4.3e-21  Score=155.85  Aligned_cols=184  Identities=16%  Similarity=0.222  Sum_probs=120.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .++|++.+.||+|+||.+++    .+++.||||.+.... ......+..|+.++.... ||||+++++++..++..+++|
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   93 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM   93 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence            36788899999999999444    348899999997542 334456777888777774 999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccce-------------------------------------eee--------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTR-------------------------------------VRI--------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~-------------------------------------~~i--------------  137 (253)
                      ||+.+ ++.+++.....  .+++...                                     ..+              
T Consensus        94 e~~~~-~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~  170 (296)
T cd06618          94 ELMST-CLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA  170 (296)
T ss_pred             eccCc-CHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence            99864 55544321000  0000000                                     000              


Q ss_pred             --------------eee----cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 --------------YAL----HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 --------------~~~----~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                    ...    ++.++.++||||||+++|+|++|+.||....... .....+    .. .......    
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~----~~-~~~~~~~----  240 (296)
T cd06618         171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF-EVLTKI----LQ-EEPPSLP----  240 (296)
T ss_pred             ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH-HHHHHH----hc-CCCCCCC----
Confidence                          001    1236678999999999999999999986432211 111111    11 1100000    


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         ........+.+++.+||..+|.+||++.+++.
T Consensus       241 ---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         241 ---PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             ---CCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence               01123456888999999999999999999985

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.84  E-value=1.5e-20  Score=154.10  Aligned_cols=76  Identities=16%  Similarity=0.235  Sum_probs=59.9

Q ss_pred             CccccccccceEee------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe--cCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKLL------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~~lv~e~~~~  113 (253)
                      ..||+|+||.+++.      ++..||+|.+....  ....+.+|+.+++.++||||+++++++..  +...+++|||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            57999999996552      44689999987532  33467899999999999999999998854  4678999999875


Q ss_pred             CChhhhc
Q 043709          114 KSLDYFL  120 (253)
Q Consensus       114 g~L~~~l  120 (253)
                       +|.+++
T Consensus        85 -~l~~~~   90 (317)
T cd07867          85 -DLWHII   90 (317)
T ss_pred             -cHHHHH
Confidence             655544

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.84  E-value=6.3e-22  Score=165.99  Aligned_cols=177  Identities=18%  Similarity=0.209  Sum_probs=125.0

Q ss_pred             ccCccccccccceEe----eCCCEEEEEEecc----cccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe--eEEEEe
Q 043709           40 MENKLGEGGFGPGKL----LNGEQVAVKRLSS----QSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV--KILIYE  109 (253)
Q Consensus        40 ~~~~ig~G~fg~~~~----~~~~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~--~~lv~e  109 (253)
                      ..+.||+|+|-++++    .+|-.||--.++.    .++...++|..|+.+|+.|+||||++++..|.+...  +.+|+|
T Consensus        44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE  123 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE  123 (632)
T ss_pred             hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence            557899999999877    3455666433331    256667899999999999999999999999987755  889999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      ++..|+|+.|+++.+..   .......|                                                    
T Consensus       124 L~TSGtLr~Y~kk~~~v---n~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~  200 (632)
T KOG0584|consen  124 LFTSGTLREYRKKHRRV---NIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH  200 (632)
T ss_pred             cccCCcHHHHHHHhccC---CHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence            99999999998442211   11111111                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......|+..+||||||++|.||+|+.-||.  +-.   -...+ +.++..+..+..+....     
T Consensus       201 aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYs--EC~---n~AQI-YKKV~SGiKP~sl~kV~-----  269 (632)
T KOG0584|consen  201 AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYS--ECT---NPAQI-YKKVTSGIKPAALSKVK-----  269 (632)
T ss_pred             cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChh--hhC---CHHHH-HHHHHcCCCHHHhhccC-----
Confidence                         1233569999999999999999999998874  111   11111 33333343333333322     


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         -+.+.++|.+|+.. .++|||+.++|+
T Consensus       270 ---dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  270 ---DPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             ---CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence               24677888999998 999999999985

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.84  E-value=2.7e-21  Score=167.51  Aligned_cols=193  Identities=17%  Similarity=0.236  Sum_probs=138.6

Q ss_pred             cccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEE
Q 043709           25 FFSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCV   99 (253)
Q Consensus        25 ~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~   99 (253)
                      ...++.+..++.-|++.+.||.|.+|++++    ..++.+|+|++..+. +..++...|.++++.. .|||++.++|++.
T Consensus         8 ~~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~   86 (953)
T KOG0587|consen    8 DIDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFI   86 (953)
T ss_pred             ccchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEE
Confidence            345667777888899999999999999544    678889999997643 3346788899999987 6999999999996


Q ss_pred             -----ecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------
Q 043709          100 -----EKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------  137 (253)
Q Consensus       100 -----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------  137 (253)
                           .++.+|||||||.+|+..+++++.. ...+.|.....|                                     
T Consensus        87 k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen   87 KKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             EecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEe
Confidence                 3468999999999999999985433 222222222111                                     


Q ss_pred             ---------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh
Q 043709          138 ---------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 ---------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                       ......|+..+|+||||++..||.-|.+|+....+            
T Consensus       166 DFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHP------------  233 (953)
T KOG0587|consen  166 DFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHP------------  233 (953)
T ss_pred             eeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcch------------
Confidence                                             11223488899999999999999999999753332            


Q ss_pred             hhcCCCccccccc-cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 LWNDGSLWDLMDP-MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         ...+..++.. ..+...+..-..++.++|..||..|.++||++.++++
T Consensus       234 ---mraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  234 ---MRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             ---hhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence               1111222211 1112222344567888999999999999999999875

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.84  E-value=1.3e-21  Score=155.89  Aligned_cols=176  Identities=16%  Similarity=0.167  Sum_probs=120.0

Q ss_pred             cccccccceEe----eCCCEEEEEEeccccc---ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQSG---QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      ||+|+||.++.    .+++.+++|.+.....   ...+.+.+|+.+++.++||||+++++.+...+..++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            68999999444    3588999999975432   4556789999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCcCCCCccceeee-----------------------------------------------------------
Q 043709          117 DYFLFDPANKGRLGWGTRVRI-----------------------------------------------------------  137 (253)
Q Consensus       117 ~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------------  137 (253)
                      .+++.+..   .+.......+                                                           
T Consensus        81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579          81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence            88874321   1111111100                                                           


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ......++.++|+||||+++|++++|..||......  ...    .... .+..        ....
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~----~~~~-~~~~--------~~~~  222 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--EIF----QNIL-NGKI--------EWPE  222 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHH----HHHh-cCCc--------CCCc
Confidence                          001122456899999999999999999998643321  111    1111 1110        0000


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ....+..+..++.+||+.+|++||++..+.+.|+
T Consensus       223 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         223 DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            1112467788899999999999999955555544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=1.5e-21  Score=161.03  Aligned_cols=172  Identities=15%  Similarity=0.125  Sum_probs=113.6

Q ss_pred             cccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc---cCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL---QDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l---~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      ||+|+||.+++    .+++.||+|++...   .......+..|..++..+   .||||+++++.+...+..++||||+.+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            69999999654    46889999999643   122334456677777665   699999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|..++.....   +.......+                                                        
T Consensus        81 g~L~~~l~~~~~---~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  157 (330)
T cd05586          81 GELFWHLQKEGR---FSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC  157 (330)
T ss_pred             ChHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence            999877632111   000000000                                                        


Q ss_pred             ---------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ---------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ---------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                               .+. ...++.++|||||||++|||++|..||......  .....+     ..+.. ....        ...
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~--~~~~~i-----~~~~~-~~~~--------~~~  221 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--QMYRNI-----AFGKV-RFPK--------NVL  221 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH--HHHHHH-----HcCCC-CCCC--------ccC
Confidence                     111 224788899999999999999999998643221  111111     11110 1110        112


Q ss_pred             HHHHHHHhccccCCCCCCCC----CHHHHHH
Q 043709          208 LKRYSNVDLFCFRENATDRP----TMLEIVS  234 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RP----s~~~il~  234 (253)
                      ...+.+++.+||..||.+||    ++.++++
T Consensus       222 ~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         222 SDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             CHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            34667888889999999998    4666654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.84  E-value=6.5e-21  Score=150.61  Aligned_cols=202  Identities=15%  Similarity=0.116  Sum_probs=135.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccccc--ccHHHHHHHHHHHHhccCCC-cceEeEEEEecC-----
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG--QGLEEFKNEMMLIAKLQDIN-LVRIIGCCVEKG-----  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~n-Iv~~~~~~~~~~-----  102 (253)
                      ...|..++.||+|+||++++    .+|+.||+|+++....  ..-....+|+.+++.++|+| |+.+++++.+.+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            34577778999999999554    6899999999986533  24456899999999999999 999999999877     


Q ss_pred             -eeEEEEeeCCCCChhhhccCCCCc-CCCCccceeee-------------------------------------------
Q 043709          103 -VKILIYEHMPNKSLDYFLFDPANK-GRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       103 -~~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~i-------------------------------------------  137 (253)
                       .+++|+||+.. +|..++...... ..++......+                                           
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr  168 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR  168 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence             89999999985 898888543321 01111111111                                           


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh--hhcCCCcc
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN--LWNDGSLW  192 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~  192 (253)
                                             .+....|+..+||||+||++.||+++++-|.....  ...+..+..-  ......++
T Consensus       169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se--~~ql~~If~~lGtP~e~~Wp  246 (323)
T KOG0594|consen  169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE--IDQLFRIFRLLGTPNEKDWP  246 (323)
T ss_pred             HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH--HHHHHHHHHHcCCCCccCCC
Confidence                                   23334699999999999999999998877765554  2222222111  11112222


Q ss_pred             cccc-----ccCCCCC-CHH-------HHHHHHHHhccccCCCCCCCCCHHHHHHH--Hhhc
Q 043709          193 DLMD-----PMLQTEA-SYP-------ILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNE  239 (253)
Q Consensus       193 ~~~~-----~~~~~~~-~~~-------~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~  239 (253)
                      .+..     ....... ...       ......+++.+|++.+|.+|.|++..+..  +.+.
T Consensus       247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            2211     0111111 111       11367888999999999999999998864  4444

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.84  E-value=1.8e-20  Score=155.43  Aligned_cols=218  Identities=14%  Similarity=0.085  Sum_probs=135.5

Q ss_pred             ccccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEE
Q 043709           24 PFFSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGC   97 (253)
Q Consensus        24 ~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~   97 (253)
                      +.....++...+++|++.+.||+|+||.++.    .+++.||+|++...  .....+.+.+|+.+++.++||||++++++
T Consensus         5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~   84 (345)
T cd07877           5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV   84 (345)
T ss_pred             hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence            3445566777889999999999999999443    56889999999753  22334668899999999999999999998


Q ss_pred             EEec------CeeEEEEeeCCCCChhhhccCCCCcCCCCccceee-----------------------------------
Q 043709           98 CVEK------GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVR-----------------------------------  136 (253)
Q Consensus        98 ~~~~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~-----------------------------------  136 (253)
                      +...      +..+++++++ +++|.+++....    +.+.....                                   
T Consensus        85 ~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~  159 (345)
T cd07877          85 FTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL  159 (345)
T ss_pred             eeecccccccccEEEEehhc-ccCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCE
Confidence            8643      3467888876 678877653211    01100000                                   


Q ss_pred             -e---------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh---
Q 043709          137 -I---------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL---  185 (253)
Q Consensus       137 -i---------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~---  185 (253)
                       +                           ......++.++|||||||++|||++|..||.......  .........   
T Consensus       160 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~  237 (345)
T cd07877         160 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID--QLKLILRLVGTP  237 (345)
T ss_pred             EEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCC
Confidence             0                           0011346778999999999999999999985433211  111000000   


Q ss_pred             -------hcCCC-------ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcccCCCCCCCC
Q 043709          186 -------WNDGS-------LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEIVNLPYPQQS  249 (253)
Q Consensus       186 -------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~~~~~~~~~~  249 (253)
                             .....       ......... ..........+.+++.+|++.+|.+||++.+++  ..+.+.......|..+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~~~~  316 (345)
T cd07877         238 GAELLKKISSESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD  316 (345)
T ss_pred             CHHHHhhcccHhHHHHHHHhcccCCcch-hhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCccccCC
Confidence                   00000       000000000 000011244677899999999999999999998  4455555444444333

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>PTZ00284 protein kinase; Provisional

Probab=99.84  E-value=4.6e-21  Score=165.10  Aligned_cols=89  Identities=22%  Similarity=0.308  Sum_probs=64.8

Q ss_pred             HHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccC------CCcceEeEEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQD------INLVRIIGCCV   99 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~nIv~~~~~~~   99 (253)
                      ++...+++|++.+.||+|+||++++    .+++.||||+++... ........|+.++..++|      .+++++++++.
T Consensus       123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            3444567899999999999999665    467889999996432 223445667777776654      45888888887


Q ss_pred             ec-CeeEEEEeeCCCCChhhhc
Q 043709          100 EK-GVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus       100 ~~-~~~~lv~e~~~~g~L~~~l  120 (253)
                      .. +.+++||+++ +++|.+++
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l  222 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWI  222 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHH
Confidence            54 5789999988 45676655

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.84  E-value=2.5e-20  Score=150.44  Aligned_cols=193  Identities=17%  Similarity=0.175  Sum_probs=121.0

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhc---cCCCcceEeEEEEecCe-----
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKL---QDINLVRIIGCCVEKGV-----  103 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~~~~~~~~~~~-----  103 (253)
                      |++.+.||+|+||.+++    .+++.||+|.+....  ......+.+|+.+++.+   .||||+++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            56788999999999544    357899999997432  22234566788877766   59999999999988776     


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      ++++|||+.+ +|.+++...... .+++.....+                                              
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKP-GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence            9999999984 787776432110 1111111111                                              


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC--c------
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS--L------  191 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~------  191 (253)
                                        ......++.++|+|||||++|||++|..||.....  ......+.........  .      
T Consensus       159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07838         159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE--ADQLDKIFDVIGLPSEEEWPRNVSL  236 (287)
T ss_pred             CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh--HHHHHHHHHHcCCCChHhcCCCccc
Confidence                              11223456789999999999999999888764322  1111111111100000  0      


Q ss_pred             -cccccccCC---CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          192 -WDLMDPMLQ---TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       192 -~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       .........   ..........+.+++.+||+.||++||++.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence             000000000   1111234567788999999999999999999884

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.5e-22  Score=179.12  Aligned_cols=191  Identities=15%  Similarity=0.155  Sum_probs=136.0

Q ss_pred             HHHHHHHhcCccccCccccccccceE----eeCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           28 LASISAATDNFSMENKLGEGGFGPGK----LLNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~ig~G~fg~~~----~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      ..++....++|.+++.||+|+||.|.    +.+++.||+|++++.   .......|..|-.+|.....+.|++++-.|.+
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            34566677899999999999999943    367899999999863   34556779999999999999999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+++|+||||++||||-.++.+-. .-+-.|. ++.+                                           
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~A-rFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClk  224 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWA-RFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLK  224 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcC-CChHHHH-HHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHh
Confidence            999999999999999998883321 0000010 0000                                           


Q ss_pred             --------------------------eeec-CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC
Q 043709          138 --------------------------YALH-GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS  190 (253)
Q Consensus       138 --------------------------~~~~-~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  190 (253)
                                                ...+ +.|+..+|-||+||++|||+.|..||.....     +.-- ...++..+
T Consensus       225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl-----veTY-~KIm~hk~  298 (1317)
T KOG0612|consen  225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL-----VETY-GKIMNHKE  298 (1317)
T ss_pred             cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH-----HHHH-HHHhchhh
Confidence                                      2223 6799999999999999999999999974332     2111 11112211


Q ss_pred             ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCC---HHHHHH
Q 043709          191 LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPT---MLEIVS  234 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs---~~~il~  234 (253)
                             .+..+....++..+.+||.+.+. +|+.|-.   ++++-.
T Consensus       299 -------~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~  337 (1317)
T KOG0612|consen  299 -------SLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN  337 (1317)
T ss_pred             -------hcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence                   22222223366777788877665 8888887   888764

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.83  E-value=2.3e-21  Score=155.88  Aligned_cols=179  Identities=16%  Similarity=0.170  Sum_probs=126.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ++|.+.+.||+|+||.++.    .+++.||+|++...   .....+.+.+|..+++.+. ||||+++++++..++..+++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            4789999999999999554    46889999999753   2233467889999999998 99999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+.+++|.+++....   .+.+.....+                                                  
T Consensus        81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~  157 (280)
T cd05581          81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS  157 (280)
T ss_pred             EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence            99999999998884321   1111111110                                                  


Q ss_pred             -----------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh
Q 043709          138 -----------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI  182 (253)
Q Consensus       138 -----------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~  182 (253)
                                                         ......++.++|+||||++++++++|..||.....  ....... 
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~-  234 (280)
T cd05581         158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--YLTFQKI-  234 (280)
T ss_pred             cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHH-
Confidence                                               00112356689999999999999999999864431  1111110 


Q ss_pred             HhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCH----HHHHH
Q 043709          183 WNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTM----LEIVS  234 (253)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~----~~il~  234 (253)
                         . .          .....+......+.+++.+||+.+|++||++    +++++
T Consensus       235 ---~-~----------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         235 ---L-K----------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             ---H-h----------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence               0 0          0011112224567888999999999999999    77664

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.83  E-value=8.4e-21  Score=152.81  Aligned_cols=192  Identities=19%  Similarity=0.180  Sum_probs=125.4

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      |+..+.||+|++|.++.    .+++.+|+|.+....  ....+.+..|+.+++.++|+||+++++++.+.+..++++||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            56678899999998543    468899999998652  344567889999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      . ++|.+++....  ..+++.....+                                                      
T Consensus        81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (282)
T cd07829          81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH  157 (282)
T ss_pred             C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence            8 58988874321  01111111110                                                      


Q ss_pred             -----------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC--------CCc--cccc
Q 043709          138 -----------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND--------GSL--WDLM  195 (253)
Q Consensus       138 -----------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~~  195 (253)
                                 ... ...++.++|||||||++||+++|..||......  .............        ...  ....
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (282)
T cd07829         158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--DQLFKIFQILGTPTEESWPGVTKLPDYKPT  235 (282)
T ss_pred             cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCCCcHHHHHhhccccccccc
Confidence                       011 125667899999999999999998887543311  1111110000000        000  0000


Q ss_pred             cccCCC----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 DPMLQT----EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 ~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+....    .........+.+++.+||..+|++||++.+++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         236 FPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             ccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            111111    111122457889999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.83  E-value=3.1e-20  Score=153.86  Aligned_cols=205  Identities=18%  Similarity=0.200  Sum_probs=125.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG------  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~------  102 (253)
                      ..+|.+.+.||+|+||.+++    .+++.||+|++...  .......+.+|+.+++.++||||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            47899999999999999543    46889999998753  2333456889999999999999999999987542      


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCc-----------------------------C-----------CCCccce--------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANK-----------------------------G-----------RLGWGTR--------  134 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~-----------------------------~-----------~~~~~~~--------  134 (253)
                      ..++++||+.. +|..+....-..                             .           ..++...        
T Consensus        94 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~  172 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMT  172 (342)
T ss_pred             eEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC
Confidence            46999999864 665543110000                             0           0000000        


Q ss_pred             --ee---e----eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh----------hcCCCcccc
Q 043709          135 --VR---I----YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL----------WNDGSLWDL  194 (253)
Q Consensus       135 --~~---i----~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~  194 (253)
                        ..   .    ... ...++.++|||||||++|||++|+.||......  ..........          .........
T Consensus       173 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (342)
T cd07879         173 GYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--DQLTQILKVTGVPGPEFVQKLEDKAAKSY  250 (342)
T ss_pred             CceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHHHHHhcccchHHH
Confidence              00   0    111 134678899999999999999999998753321  1111110000          000000000


Q ss_pred             cc--ccC-CCC---CCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcccC
Q 043709          195 MD--PML-QTE---ASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEIVN  242 (253)
Q Consensus       195 ~~--~~~-~~~---~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~~~  242 (253)
                      ..  +.. ...   ........+.+++.+||+.||++||++++++  ..++.....
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         251 IKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             HhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence            00  000 000   0011234677899999999999999999999  447666543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.83  E-value=1.2e-20  Score=155.85  Aligned_cols=84  Identities=20%  Similarity=0.338  Sum_probs=67.4

Q ss_pred             cCcc-ccCccccccccceEe----eCCCEEEEEEeccccccc--------------HHHHHHHHHHHHhccCCCcceEeE
Q 043709           36 DNFS-MENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQG--------------LEEFKNEMMLIAKLQDINLVRIIG   96 (253)
Q Consensus        36 ~~~~-~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~nIv~~~~   96 (253)
                      ++|. +.+.||.|+||.+++    .+++.||||++.......              ...+.+|+.+++.++||||+++++
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   87 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD   87 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence            4565 456799999999554    468899999986532111              124779999999999999999999


Q ss_pred             EEEecCeeEEEEeeCCCCChhhhc
Q 043709           97 CCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        97 ~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      ++...+..+++|||+. |+|.+++
T Consensus        88 ~~~~~~~~~lv~e~~~-~~l~~~l  110 (335)
T PTZ00024         88 VYVEGDFINLVMDIMA-SDLKKVV  110 (335)
T ss_pred             EEecCCcEEEEEeccc-cCHHHHH
Confidence            9999999999999997 5888776

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.83  E-value=1.7e-20  Score=151.72  Aligned_cols=213  Identities=19%  Similarity=0.193  Sum_probs=137.8

Q ss_pred             CCCCCcccccHHHHHHHhcCccccCccccccccc--eEeeCCCEEEEEEecccccccHHHHHHHHHHHHh--ccCCCcce
Q 043709           18 SKESCIPFFSLASISAATDNFSMENKLGEGGFGP--GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAK--LQDINLVR   93 (253)
Q Consensus        18 ~~~~~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~--~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~   93 (253)
                      ....+++.+-+.-+   ..+..+.+.||+|.||.  ...+.|+.||||++..   .+...+.+|.++...  |+|+||+.
T Consensus       196 GSGSGlplLVQRTi---arqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILg  269 (513)
T KOG2052|consen  196 GSGSGLPLLVQRTI---ARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILG  269 (513)
T ss_pred             CCCCCchhHhHHhh---hheeEEEEEecCccccceeeccccCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhh
Confidence            33445555555444   34788999999999999  5568999999999975   334567888888775  59999999


Q ss_pred             EeEEEEecC----eeEEEEeeCCCCChhhhccCCCCc--------------------------------------CCCCc
Q 043709           94 IIGCCVEKG----VKILIYEHMPNKSLDYFLFDPANK--------------------------------------GRLGW  131 (253)
Q Consensus        94 ~~~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~--------------------------------------~~~~~  131 (253)
                      +++.-..++    ++|||.+|.+.|+|.+||.+..-.                                      +.+-.
T Consensus       270 FIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV  349 (513)
T KOG2052|consen  270 FIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  349 (513)
T ss_pred             hhhccccCCCceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE
Confidence            998876543    699999999999999999331100                                      00000


Q ss_pred             cc--eeee--------------------------------e-----eecCcc--ccccceeehhHHHHHHHhCC------
Q 043709          132 GT--RVRI--------------------------------Y-----ALHGVF--SIKSDVFSFGVLLLETLSSK------  164 (253)
Q Consensus       132 ~~--~~~i--------------------------------~-----~~~~~~--~~~~DiwSlG~~l~ell~~~------  164 (253)
                      ..  .+.|                                .     +....|  =..+||||||.++||++.+.      
T Consensus       350 Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~  429 (513)
T KOG2052|consen  350 KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIV  429 (513)
T ss_pred             ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEe
Confidence            00  0000                                0     000001  13589999999999998643      


Q ss_pred             ----CCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          165 ----KNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       165 ----~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                          .||...-+.+..+...  ....-...+...+.+.+   ...+....+.++|..||..||..|-|+-.|-+.|.++.
T Consensus       430 eey~~Pyyd~Vp~DPs~eeM--rkVVCv~~~RP~ipnrW---~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~  504 (513)
T KOG2052|consen  430 EEYQLPYYDVVPSDPSFEEM--RKVVCVQKLRPNIPNRW---KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS  504 (513)
T ss_pred             hhhcCCcccCCCCCCCHHHH--hcceeecccCCCCCccc---ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence                3444332222222111  11111222222222222   23567788999999999999999999999999888887


Q ss_pred             c
Q 043709          241 V  241 (253)
Q Consensus       241 ~  241 (253)
                      .
T Consensus       505 ~  505 (513)
T KOG2052|consen  505 N  505 (513)
T ss_pred             c
Confidence            4

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.83  E-value=2.1e-20  Score=151.31  Aligned_cols=182  Identities=17%  Similarity=0.137  Sum_probs=122.7

Q ss_pred             CccccCccccccccceEe-------eCCCEEEEEEecccc----cccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCee
Q 043709           37 NFSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQS----GQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~  104 (253)
                      +|++.+.||+|+||.++.       .++..||+|++....    ....+.+.+|+.+++.+ +|+||+.+++.+..++..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            478889999999998543       367899999997532    22346688899999999 599999999999998999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++++||+++++|.+++.....   +.......+                                               
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  157 (290)
T cd05613          81 HLILDYINGGELFTHLSQRER---FKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE  157 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence            999999999999998743211   111100000                                               


Q ss_pred             -------------------ee--ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 -------------------YA--LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 -------------------~~--~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                         ..  ....++.++||||||+++|++++|..||....... .. ...........       
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~-~~-~~~~~~~~~~~-------  228 (290)
T cd05613         158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN-SQ-AEISRRILKSE-------  228 (290)
T ss_pred             ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc-cH-HHHHHHhhccC-------
Confidence                               00  01234578999999999999999999986432211 11 11101111110       


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                          ...+......+.+++.+||+.+|++||     ++.++++
T Consensus       229 ----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         229 ----PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             ----CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence                011122345677888899999999997     6677664

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.83  E-value=1.8e-21  Score=148.74  Aligned_cols=189  Identities=16%  Similarity=0.226  Sum_probs=133.4

Q ss_pred             HHhcCccccCccccccccc----eEeeCCCEEEEEEeccc----cc----ccHHHHHHHHHHHHhcc-CCCcceEeEEEE
Q 043709           33 AATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ----SG----QGLEEFKNEMMLIAKLQ-DINLVRIIGCCV   99 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~----~~----~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~   99 (253)
                      .....|...+.+|+|..+.    ....++..+|+|++...    +.    ...+.-.+|+.+|+++. ||||+++.+++.
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            3445788889999998887    55688999999999632    11    22345678999999985 999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCC-------------------------------CcCCCCcc----------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPA-------------------------------NKGRLGWG----------------  132 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~-------------------------------~~~~~~~~----------------  132 (253)
                      ++..+++|.|.|+.|.|.++|.+.-                               +...+-..                
T Consensus        94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l  173 (411)
T KOG0599|consen   94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL  173 (411)
T ss_pred             CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence            9999999999999999999992200                               00000000                


Q ss_pred             --------------------ceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcc
Q 043709          133 --------------------TRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLW  192 (253)
Q Consensus       133 --------------------~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (253)
                                          ..+.+.-.+..|+..+|+||+|++||.|+.|.+||+...  +.-++..+     ..+ -.
T Consensus       174 ~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk--QmlMLR~I-----meG-ky  245 (411)
T KOG0599|consen  174 EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK--QMLMLRMI-----MEG-KY  245 (411)
T ss_pred             CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH--HHHHHHHH-----Hhc-cc
Confidence                                001113345679999999999999999999999987332  12222222     111 11


Q ss_pred             ccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                           ..+.+...+.+....+|+.+||+.||.+|.|+++.++
T Consensus       246 -----qF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  246 -----QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             -----ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence                 1223333455667888999999999999999999884

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.82  E-value=4.3e-20  Score=148.69  Aligned_cols=175  Identities=17%  Similarity=0.100  Sum_probs=114.7

Q ss_pred             ccccccccceEe----eCCCEEEEEEeccccc---ccHHHHHHHHHH---HHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           43 KLGEGGFGPGKL----LNGEQVAVKRLSSQSG---QGLEEFKNEMML---IAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        43 ~ig~G~fg~~~~----~~~~~vavK~~~~~~~---~~~~~~~~E~~~---l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .||+|+||.++.    .+++.||+|.+.....   .....+..|..+   ++...||||+.+++.+...+..++||||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            479999999654    4678999999875421   112234444433   444579999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|..++....   .+.+.....+                                                       
T Consensus        81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (278)
T cd05606          81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (278)
T ss_pred             CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence            999988773221   1111111110                                                       


Q ss_pred             --------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 --------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 --------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                              .. ....++.++||||+|+++|||++|..||..............    ..      .....    .....+
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~------~~~~~----~~~~~s  223 (278)
T cd05606         158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM----TL------TMAVE----LPDSFS  223 (278)
T ss_pred             CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH----hh------ccCCC----CCCcCC
Confidence                    01 122477889999999999999999999865432211111000    00      00111    111234


Q ss_pred             HHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          209 KRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      ..+.+++.+||..+|.+||     ++.++++
T Consensus       224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            6788888899999999999     9999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.82  E-value=6.5e-21  Score=157.11  Aligned_cols=198  Identities=15%  Similarity=0.138  Sum_probs=129.1

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecC-----eeE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-----VKI  105 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-----~~~  105 (253)
                      +|.+.+.||.|++|.+++    .+++.+|+|++....  ....+.+.+|+.+++.++||||+++++++...+     .++
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            478889999999999544    357899999997643  445578999999999999999999999988765     789


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++|+|+. ++|.+++....   .+.+.....+                                                
T Consensus        81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence            9999998 47877764321   1111111000                                                


Q ss_pred             --------------------eeecC-ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh----------h
Q 043709          138 --------------------YALHG-VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL----------W  186 (253)
Q Consensus       138 --------------------~~~~~-~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~----------~  186 (253)
                                          ..... .++.++|+||||+++|+|++|..||......  .....+....          .
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~  234 (330)
T cd07834         157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDLKFI  234 (330)
T ss_pred             ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHhhhc
Confidence                                11112 5677899999999999999999998654321  1111110000          0


Q ss_pred             cCCCccccccc------cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          187 NDGSLWDLMDP------MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       187 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ........+..      ..........+..+.+++.+||+.+|++||+++++++  .++...
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence            00000000000      0000011123466788999999999999999999996  466655

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.82  E-value=3.4e-21  Score=150.14  Aligned_cols=198  Identities=17%  Similarity=0.170  Sum_probs=138.2

Q ss_pred             ccHHHHHHHhcCccccCccccccccc----eEeeCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEe
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVE  100 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~  100 (253)
                      -++.++-..++     +.||+|+|+.    +...++..||||++.+..--...+..+|++++.+++ |+||+++++++.+
T Consensus        73 g~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd  147 (463)
T KOG0607|consen   73 GKFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED  147 (463)
T ss_pred             chHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence            45777777766     7899999998    667899999999999876667789999999999995 9999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCC-------------CCc-----------------------cceeee-------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGR-------------LGW-----------------------GTRVRI-------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~-------------~~~-----------------------~~~~~i-------  137 (253)
                      +...|+|||-+.||.|-+.|+++.....             +.+                       ..++.|       
T Consensus       148 d~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgS  227 (463)
T KOG0607|consen  148 DTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGS  227 (463)
T ss_pred             cceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccc
Confidence            9999999999999999888733221000             000                       000011       


Q ss_pred             ----------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC-Ccchh----
Q 043709          138 ----------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN-SLTLL----  178 (253)
Q Consensus       138 ----------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~-~~~~~----  178 (253)
                                                        +-....|+.++|.|||||++|-|++|-+||.+.=.. ..+-.    
T Consensus       228 g~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~C  307 (463)
T KOG0607|consen  228 GIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVC  307 (463)
T ss_pred             ccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCcc
Confidence                                              122335889999999999999999999998754221 11100    


Q ss_pred             hhhhHhhhcCCCcccccccc---CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          179 GYVIWNLWNDGSLWDLMDPM---LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+..+      .+-++..   ++......++....+++...+-.++..|-++.++++
T Consensus       308 r~CQ~~L------FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  308 RVCQNKL------FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHH------HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            0110111      1111111   111112235556777888888899999999999886

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=2.8e-21  Score=151.06  Aligned_cols=177  Identities=14%  Similarity=0.138  Sum_probs=127.8

Q ss_pred             HhcCccccCccccccccceE----eeCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGK----LLNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~----~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|..++.||+|.||++.    +.+++.||+|++++.   ..+++..-+.|-++|+..+||.+..+.-.+...+.+++
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF  245 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF  245 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence            44689999999999999944    467999999999875   45667778899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCC-------------CCccceeee------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGR-------------LGWGTRVRI------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~-------------~~~~~~~~i------------------------------------  137 (253)
                      ||||..||.|...|.+.+....             +.+.....+                                    
T Consensus       246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~  325 (516)
T KOG0690|consen  246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTT  325 (516)
T ss_pred             EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccccccee
Confidence            9999999999888843211000             000000000                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ++....|+.++|-|.+||+||||++|+.||........  ..     +.        .-..  -.++
T Consensus       326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL--Fe-----LI--------l~ed--~kFP  388 (516)
T KOG0690|consen  326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL--FE-----LI--------LMED--LKFP  388 (516)
T ss_pred             ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH--HH-----HH--------Hhhh--ccCC
Confidence                         34455699999999999999999999999875443211  00     00        0001  1222


Q ss_pred             HHHHHHHHHHhccccCCCCCCCC
Q 043709          205 YPILKRYSNVDLFCFRENATDRP  227 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RP  227 (253)
                      .....+...|+...|..||.+|.
T Consensus       389 r~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  389 RTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             ccCCHHHHHHHHHHhhcChHhhc
Confidence            33445667777779999999994

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.82  E-value=1.5e-20  Score=155.86  Aligned_cols=206  Identities=16%  Similarity=0.136  Sum_probs=129.2

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe----
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV----  103 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~----  103 (253)
                      ..++|++.+.||+|++|.++.    .+++.||+|++...  .....+.+.+|+.+++.+.||||+++.+++...+.    
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            456899999999999999544    46789999998643  23344667889999999999999999988765544    


Q ss_pred             --eEEEEeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------
Q 043709          104 --KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------  137 (253)
Q Consensus       104 --~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------  137 (253)
                        .++++||+ +++|.+++....    +.+.....+                                            
T Consensus        93 ~~~~lv~e~~-~~~L~~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~  167 (343)
T cd07851          93 QDVYLVTHLM-GADLNNIVKCQK----LSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARH  167 (343)
T ss_pred             ccEEEEEecC-CCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccc
Confidence              89999998 468888763311    111000000                                            


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh----------hcC
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL----------WND  188 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~----------~~~  188 (253)
                                         ......++.++|||||||++||+++|..||......  ..........          ...
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~  245 (343)
T cd07851         168 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--DQLKRIMNLVGTPDEELLQKISS  245 (343)
T ss_pred             ccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCCHHHHhhccc
Confidence                               001124567899999999999999999998643321  1111110000          000


Q ss_pred             CCccccccc---cCCC---CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcccCCCCC
Q 043709          189 GSLWDLMDP---MLQT---EASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIVNLPYP  246 (253)
Q Consensus       189 ~~~~~~~~~---~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~~~~~~  246 (253)
                      .........   ....   .........+.+++.+||+.+|++|||+.+|++  .++.....-+.|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~  311 (343)
T cd07851         246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEP  311 (343)
T ss_pred             hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcccc
Confidence            000000000   0000   000112467889999999999999999999985  455544333333

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.82  E-value=2.2e-20  Score=147.75  Aligned_cols=168  Identities=18%  Similarity=0.144  Sum_probs=116.7

Q ss_pred             cccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      ||.|+||.++.    .+++.+|+|.+....   ......+..|+.+++.++||||+++++.+..++..+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            68999998443    358899999987542   23456789999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCcCCCCccceeee-----------------------------------------------------------
Q 043709          117 DYFLFDPANKGRLGWGTRVRI-----------------------------------------------------------  137 (253)
Q Consensus       117 ~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------------  137 (253)
                      .+++.....   +++.....+                                                           
T Consensus        81 ~~~l~~~~~---l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05123          81 FSHLSKEGR---FSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP  157 (250)
T ss_pred             HHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence            988743211   111100000                                                           


Q ss_pred             ------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHH
Q 043709          138 ------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRY  211 (253)
Q Consensus       138 ------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (253)
                            .......+.++|+||||+++|++++|..||.....  .......    .. .          ....+......+
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~----~~-~----------~~~~~~~~~~~l  220 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKI----LK-D----------PLRFPEFLSPEA  220 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----hc-C----------CCCCCCCCCHHH
Confidence                  01112345689999999999999999999854332  1111111    00 0          011111224567


Q ss_pred             HHHhccccCCCCCCCCCHHH
Q 043709          212 SNVDLFCFRENATDRPTMLE  231 (253)
Q Consensus       212 ~~l~~~cl~~~p~~RPs~~~  231 (253)
                      .+++.+||..||++||++.+
T Consensus       221 ~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         221 RDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHHHhcCCHhhCCCccc
Confidence            88899999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=3.1e-20  Score=160.91  Aligned_cols=87  Identities=17%  Similarity=0.271  Sum_probs=62.7

Q ss_pred             HHhcCccccCccccccccceEee-----CCCEEEEEEe--------------cc---cccccHHHHHHHHHHHHhccCCC
Q 043709           33 AATDNFSMENKLGEGGFGPGKLL-----NGEQVAVKRL--------------SS---QSGQGLEEFKNEMMLIAKLQDIN   90 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~~-----~~~~vavK~~--------------~~---~~~~~~~~~~~E~~~l~~l~H~n   90 (253)
                      ...++|++++.||+|+||++++.     .+...++|.+              .+   ........+.+|+.+++.++|||
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            34568999999999999997652     1222222211              00   11223456889999999999999


Q ss_pred             cceEeEEEEecCeeEEEEeeCCCCChhhhc
Q 043709           91 LVRIIGCCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        91 Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      |+++++++...+..+++++++.+ +|..++
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~~-~l~~~l  253 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYDF-DLYSFM  253 (501)
T ss_pred             cCcEeEEEEECCeeEEEEecccc-CHHHHH
Confidence            99999999999999999999864 555544

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.81  E-value=6.6e-20  Score=149.70  Aligned_cols=85  Identities=27%  Similarity=0.374  Sum_probs=66.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEec-------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-------  101 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-------  101 (253)
                      .++|++.+.||+|+||.+++    .+++.+|+|++....  ......+.+|+.+++.++||||+++++++...       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            46899999999999999554    468899999986542  22234678899999999999999999887543       


Q ss_pred             -CeeEEEEeeCCCCChhhhc
Q 043709          102 -GVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus       102 -~~~~lv~e~~~~g~L~~~l  120 (253)
                       ..++++|+|+.+ ++...+
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~  105 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLL  105 (311)
T ss_pred             CceEEEEEecCCc-CHHHHH
Confidence             347999999875 555544

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.80  E-value=4.9e-20  Score=150.11  Aligned_cols=199  Identities=22%  Similarity=0.231  Sum_probs=134.2

Q ss_pred             cCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHh--ccCCCcceEeEEEEecC----eeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAK--LQDINLVRIIGCCVEKG----VKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~~~~~~~~~~----~~~lv  107 (253)
                      ...++.+.||+|.||.|++  -+++.||||++..   ...+.|..|-++.+.  ++|+||+++++.-....    .++||
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV  286 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV  286 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence            3466678999999999766  5689999999975   566789999998886  58999999999887655    79999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ++|.+.|+|.+||..    ..++|...+++                                                  
T Consensus       287 t~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL  362 (534)
T KOG3653|consen  287 TEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL  362 (534)
T ss_pred             eeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence            999999999999921    22333333322                                                  


Q ss_pred             -------------------------eeecC-------ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhh--h--
Q 043709          138 -------------------------YALHG-------VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGY--V--  181 (253)
Q Consensus       138 -------------------------~~~~~-------~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~--~--  181 (253)
                                               ..+.+       ..=.+.||||+|.+|||++++..-++.....+.++...  +  
T Consensus       363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~  442 (534)
T KOG3653|consen  363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN  442 (534)
T ss_pred             eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence                                     01111       11246899999999999999887665433332222111  0  


Q ss_pred             ------hHhhhcCCCccccccccCCCCC-CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCC
Q 043709          182 ------IWNLWNDGSLWDLMDPMLQTEA-SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPY  245 (253)
Q Consensus       182 ------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~  245 (253)
                            .+........    +|.++... ....+.-+.+.++.||+.||+.|-|+.=+-+.+.++...-+.
T Consensus       443 hPt~e~mq~~VV~kK~----RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  443 HPTLEEMQELVVRKKQ----RPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             CCCHHHHHHHHHhhcc----CCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence                  0111111111    11111111 123455678889999999999999999998888888765544

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.79  E-value=2.3e-20  Score=157.10  Aligned_cols=178  Identities=17%  Similarity=0.208  Sum_probs=127.9

Q ss_pred             hcCccccCccccccccc----eEeeCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      +..|.+...+|.|+|+.    ....+++..++|++.+..    ....+|+.++... .||||+++++.+.+....|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            56799999999999998    445788999999998642    2245677666655 79999999999999999999999


Q ss_pred             eCCCCChhhhccCCC------------------------------CcCCCCc-cce--eee-------------------
Q 043709          110 HMPNKSLDYFLFDPA------------------------------NKGRLGW-GTR--VRI-------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~------------------------------~~~~~~~-~~~--~~i-------------------  137 (253)
                      ++.||.+.+-+....                              +...+-+ ...  +++                   
T Consensus       397 ~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t  476 (612)
T KOG0603|consen  397 LLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALT  476 (612)
T ss_pred             hccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchh
Confidence            999988866552211                              1111111 000  011                   


Q ss_pred             -------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHH
Q 043709          138 -------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKR  210 (253)
Q Consensus       138 -------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (253)
                             +.....|++++|+||||++||+|++|..||...+.. .++..                 ....+.+...++..
T Consensus       477 ~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~-----------------~i~~~~~s~~vS~~  538 (612)
T KOG0603|consen  477 LQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHT-----------------RIQMPKFSECVSDE  538 (612)
T ss_pred             hcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHH-----------------hhcCCccccccCHH
Confidence                   234567999999999999999999999998655443 11111                 11122223556677


Q ss_pred             HHHHhccccCCCCCCCCCHHHHHH
Q 043709          211 YSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       211 ~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +++|+.+||+.||.+||++.++..
T Consensus       539 AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  539 AKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHHHHHHhccCChhhCcChhhhcc
Confidence            888999999999999999999884

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.78  E-value=4e-19  Score=146.65  Aligned_cols=83  Identities=18%  Similarity=0.226  Sum_probs=64.1

Q ss_pred             CccccCccccccccceEe----eC--CCEEEEEEeccc--ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEec----Ce
Q 043709           37 NFSMENKLGEGGFGPGKL----LN--GEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEK----GV  103 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~----~~  103 (253)
                      +|++.+.||+|+||.+++    ..  +..||+|++...  .....+.+.+|+.+++.+ .||||+++++.+...    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            478889999999999544    33  678999998753  223356788999999999 599999999876432    45


Q ss_pred             eEEEEeeCCCCChhhhc
Q 043709          104 KILIYEHMPNKSLDYFL  120 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l  120 (253)
                      ++++++|+. ++|.+++
T Consensus        81 ~~~~~e~~~-~~L~~~l   96 (332)
T cd07857          81 LYLYEELME-ADLHQII   96 (332)
T ss_pred             EEEEEeccc-CCHHHHH
Confidence            788999886 5787766

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.78  E-value=9.6e-20  Score=131.38  Aligned_cols=196  Identities=18%  Similarity=0.216  Sum_probs=128.5

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +|...+.||+|.||++.+    .+++.||+|.++.+  ++..-...++|+.+++.++|.|||+++++..+++.+.+|+||
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~   82 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF   82 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence            466779999999999554    67889999999865  333456789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccC--------------------------------CCCcC--------C-----CC----ccceee-----
Q 043709          111 MPNKSLDYFLFD--------------------------------PANKG--------R-----LG----WGTRVR-----  136 (253)
Q Consensus       111 ~~~g~L~~~l~~--------------------------------~~~~~--------~-----~~----~~~~~~-----  136 (253)
                      |.. +|..+..+                                .-+..        .     ..    +...++     
T Consensus        83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysae  161 (292)
T KOG0662|consen   83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAE  161 (292)
T ss_pred             hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeece
Confidence            974 55544311                                00000        0     00    000000     


Q ss_pred             ----------eeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh--hcCCCcccc---cc----c
Q 043709          137 ----------IYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL--WNDGSLWDL---MD----P  197 (253)
Q Consensus       137 ----------i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~----~  197 (253)
                                +.+...-|+++.|+||-||++.|+...+.|..+.....+++.... +.+  ....+++.+   .+    |
T Consensus       162 vvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif-~~lg~p~ed~wps~t~lpdyk~yp  240 (292)
T KOG0662|consen  162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF-RLLGTPTEDQWPSMTKLPDYKPYP  240 (292)
T ss_pred             eeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHH-HHhCCCccccCCccccCCCCcccC
Confidence                      034456699999999999999999998888766655544444332 222  222222221   11    1


Q ss_pred             cCCCCCCH-----HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          198 MLQTEASY-----PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       198 ~~~~~~~~-----~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+.....+     .....-.+++.+.+.-+|..|.+++..++
T Consensus       241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            11111111     12223456677777779999999998775

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.78  E-value=1e-19  Score=140.73  Aligned_cols=186  Identities=16%  Similarity=0.101  Sum_probs=127.5

Q ss_pred             HhcCccccC-ccccccccc----eEeeCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEec----Ce
Q 043709           34 ATDNFSMEN-KLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEK----GV  103 (253)
Q Consensus        34 ~~~~~~~~~-~ig~G~fg~----~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~----~~  103 (253)
                      .+++|++.. .||-|--|+    ..+.+++.+|+|++...     +...+|+++.-.. .|||||++++++.+.    ..
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc  133 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC  133 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence            456676544 699999998    45678999999999742     4567899876666 599999999988643    46


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      +.+|||.++||+|.+-+.++... .......-.|                                              
T Consensus       134 LLiVmE~meGGeLfsriq~~g~~-afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK  212 (400)
T KOG0604|consen  134 LLIVMECMEGGELFSRIQDRGDQ-AFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK  212 (400)
T ss_pred             eEeeeecccchHHHHHHHHcccc-cchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence            89999999999999988442211 1111100000                                              


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ++....|+.++|+||+||+||-|++|-+||.......  +-... +....      .-.
T Consensus       213 ~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a--ispgM-k~rI~------~gq  283 (400)
T KOG0604|consen  213 ETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--ISPGM-KRRIR------TGQ  283 (400)
T ss_pred             ccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc--CChhH-HhHhh------ccC
Confidence                                 4556679999999999999999999999987543311  00000 11110      111


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      -.+..+....+++...+++...|..+|++|-++.++++
T Consensus       284 y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  284 YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            12223333456677888888899999999999999985

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=4.1e-20  Score=148.71  Aligned_cols=188  Identities=18%  Similarity=0.179  Sum_probs=130.8

Q ss_pred             CcccccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcce
Q 043709           22 CIPFFSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVR   93 (253)
Q Consensus        22 ~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~   93 (253)
                      .....+-.+ .....+|..+..||+|+||++-+    .+.+.||||+++++   ..++++.-..|.++|.-. +-|.+++
T Consensus       336 ~~~~~~~~d-~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~q  414 (683)
T KOG0696|consen  336 KFHNSSKRD-RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQ  414 (683)
T ss_pred             cCCCCCccc-ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHH
Confidence            333344444 34446899999999999999554    56789999999876   456667777788888766 5789999


Q ss_pred             EeEEEEecCeeEEEEeeCCCCChhhhccCCCCcC-C--CCccceeee---------------------------------
Q 043709           94 IIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKG-R--LGWGTRVRI---------------------------------  137 (253)
Q Consensus        94 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~--~~~~~~~~i---------------------------------  137 (253)
                      ++.++.+-+.+|+||||+.||+|-..++.-.+.+ +  .-+...+.+                                 
T Consensus       415 lHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DF  494 (683)
T KOG0696|consen  415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADF  494 (683)
T ss_pred             HHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeec
Confidence            9999999999999999999999988774311110 0  000000000                                 


Q ss_pred             --------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 --------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 --------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                                .+...+|+.++|-||+|++||||+.|.+||++...+  ++...+          
T Consensus       495 GmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~--elF~aI----------  562 (683)
T KOG0696|consen  495 GMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQAI----------  562 (683)
T ss_pred             ccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHH----------
Confidence                                      566788999999999999999999999998865442  222211          


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCC
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRP  227 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  227 (253)
                         .+.  .-.++...+.++..+....+...|.+|.
T Consensus       563 ---~eh--nvsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  563 ---MEH--NVSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             ---HHc--cCcCcccccHHHHHHHHHHhhcCCcccc
Confidence               000  1223344555666676667888888884

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.77  E-value=1e-19  Score=141.45  Aligned_cols=211  Identities=14%  Similarity=0.086  Sum_probs=134.3

Q ss_pred             cCccccCccccccccceEee----C----CCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEe-cCee
Q 043709           36 DNFSMENKLGEGGFGPGKLL----N----GEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-KGVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~----~----~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-~~~~  104 (253)
                      ..|+.+..||+|+||.+++.    +    ...+|||+++...  ........+|+.+++.++||||+.+..++.+ +..+
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            46889999999999997662    2    3379999997542  2334678999999999999999999999987 7889


Q ss_pred             EEEEeeCCCCChhhhccCCCCc--CCCCccceeee---------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK--GRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~--~~~~~~~~~~i---------------------------------------------  137 (253)
                      ++++||.+. ||..+|+..+..  ..++......+                                             
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGl  182 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGL  182 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccH
Confidence            999999986 888888432211  11111111111                                             


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-------chhhhhh
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-------TLLGYVI  182 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-------~~~~~~~  182 (253)
                                                  .+....||.+.||||.|||+.||++..+-|...+....       ..+..+.
T Consensus       183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf  262 (438)
T KOG0666|consen  183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF  262 (438)
T ss_pred             HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence                                        33455699999999999999999999888876554311       1111111


Q ss_pred             Hhh--hcCCCccccc---cc---------cCCCCCCH-H-------HHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          183 WNL--WNDGSLWDLM---DP---------MLQTEASY-P-------ILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       183 ~~~--~~~~~~~~~~---~~---------~~~~~~~~-~-------~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      .-+  ..+..++.+.   +.         ........ .       -.....+|+.++|..||.+|.|+++.++..  +.
T Consensus       263 ~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~--yF  340 (438)
T KOG0666|consen  263 EVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP--YF  340 (438)
T ss_pred             HHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc--cc
Confidence            111  1111111111   00         01111100 0       012377888999999999999999988643  33


Q ss_pred             cCCCCCCCC
Q 043709          241 VNLPYPQQS  249 (253)
Q Consensus       241 ~~~~~~~~~  249 (253)
                      ..-+.|+.|
T Consensus       341 ~~d~lpp~p  349 (438)
T KOG0666|consen  341 TEDPLPPLP  349 (438)
T ss_pred             ccCCCCCCc
Confidence            333344443

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.77  E-value=1.6e-19  Score=138.17  Aligned_cols=184  Identities=16%  Similarity=0.222  Sum_probs=121.8

Q ss_pred             CccccCccccccccc----eEeeCCCEEEEEEeccc-ccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      +++.+..||.|+.|.    .++.+|..+|||.+... ..++.+++++.+.++...+ .|.||+.+|++..+..+++.||.
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel  172 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL  172 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence            455667899999998    45578899999999876 4566678889998888775 89999999999999899999987


Q ss_pred             CCCCChhhhccCCCCc---------------------------------C--CCCccceeee------------------
Q 043709          111 MPNKSLDYFLFDPANK---------------------------------G--RLGWGTRVRI------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~---------------------------------~--~~~~~~~~~i------------------  137 (253)
                      +.. =++.++++..+.                                 .  .++|.-.+.+                  
T Consensus       173 Ms~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrs  251 (391)
T KOG0983|consen  173 MST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRS  251 (391)
T ss_pred             HHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccc
Confidence            642 122222110000                                 0  0111111111                  


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   .-....|+-.+||||||++++||.||..||..-..+-. .+-.+    . . +.+    |.++... 
T Consensus       252 AGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe-~ltkv----l-n-~eP----P~L~~~~-  319 (391)
T KOG0983|consen  252 AGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE-VLTKV----L-N-EEP----PLLPGHM-  319 (391)
T ss_pred             cCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH-HHHHH----H-h-cCC----CCCCccc-
Confidence                         01234588899999999999999999999875443322 22111    1 1 111    2222221 


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       .++..+..+...||+.|+.+||...++++
T Consensus       320 -gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  320 -GFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             -CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence             14567777888899999999999988664

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.77  E-value=3.1e-19  Score=140.43  Aligned_cols=155  Identities=17%  Similarity=0.078  Sum_probs=103.7

Q ss_pred             ccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCChhhhccC
Q 043709           47 GGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus        47 G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      |.+|++++    .+++.||+|.+....     .+..|...+....||||+++++++...+..+++|||+++|+|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            77887443    578899999997542     233455555556799999999999999999999999999999887733


Q ss_pred             CCCcCCCCccceeee--------------------------------------------------------------eee
Q 043709          123 PANKGRLGWGTRVRI--------------------------------------------------------------YAL  140 (253)
Q Consensus       123 ~~~~~~~~~~~~~~i--------------------------------------------------------------~~~  140 (253)
                      ...   +.+.....+                                                              ...
T Consensus        79 ~~~---l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~  155 (237)
T cd05576          79 FLN---IPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG  155 (237)
T ss_pred             hcC---CCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence            211   111110000                                                              112


Q ss_pred             cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccC
Q 043709          141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFR  220 (253)
Q Consensus       141 ~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  220 (253)
                      ...++.++|+||+|+++||+++|..|+.......                     ........+......+.+++.+||+
T Consensus       156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~li~~~l~  214 (237)
T cd05576         156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------------------NTHTTLNIPEWVSEEARSLLQQLLQ  214 (237)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------------------ccccccCCcccCCHHHHHHHHHHcc
Confidence            2346778999999999999999997754221100                     0000001112234567889999999


Q ss_pred             CCCCCCCCHH
Q 043709          221 ENATDRPTML  230 (253)
Q Consensus       221 ~~p~~RPs~~  230 (253)
                      .||++||++.
T Consensus       215 ~dp~~R~~~~  224 (237)
T cd05576         215 FNPTERLGAG  224 (237)
T ss_pred             CCHHHhcCCC
Confidence            9999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.77  E-value=4.3e-20  Score=156.00  Aligned_cols=190  Identities=15%  Similarity=0.204  Sum_probs=131.9

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .+..+|++...+|.|+||.+++    .+++..|+|+++....+...-..+|+-+++.++||||+.++|.+...+.+|+.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            4567899999999999999554    678999999999877777788899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCC--CCccceeee-------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGR--LGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~--~~~~~~~~i-------------------------------------------------  137 (253)
                      |||.+|+|.+.-+-......  +.+..+...                                                 
T Consensus        92 EycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks  171 (829)
T KOG0576|consen   92 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS  171 (829)
T ss_pred             EecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence            99999999887632111100  000000000                                                 


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    +...+.|+..+|||++|++..|+.-..+|.+...+-.     ..+......-..+..-++....  
T Consensus       172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-----~l~LmTkS~~qpp~lkDk~kws--  244 (829)
T KOG0576|consen  172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-----ALFLMTKSGFQPPTLKDKTKWS--  244 (829)
T ss_pred             ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-----HHHHhhccCCCCCcccCCccch--
Confidence                          3456779999999999999999998887754222110     0000000111111222222222  


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                           ..+-+++..|+..+|.+||+++.++.
T Consensus       245 -----~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  245 -----EFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             -----HHHHHHHHHHhcCCCccCCChhhhee
Confidence                 23344555599999999999998654

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.77  E-value=4.9e-19  Score=138.94  Aligned_cols=164  Identities=20%  Similarity=0.177  Sum_probs=113.6

Q ss_pred             eCCCEEEEEEeccccccc-HHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCChhhhccCCCCcCCCCccc
Q 043709           55 LNGEQVAVKRLSSQSGQG-LEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGT  133 (253)
Q Consensus        55 ~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~  133 (253)
                      .+++.+|+|++....... .+.+.+|+..++.++|+||+++++.+......++++||+.+++|..++.....   ..+..
T Consensus        12 ~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~---~~~~~   88 (244)
T smart00220       12 KTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGR---LSEDE   88 (244)
T ss_pred             CCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccC---CCHHH
Confidence            357899999998654444 68899999999999999999999999999999999999999999998743221   11111


Q ss_pred             eeee----------------------------------------------------------------eeecCccccccc
Q 043709          134 RVRI----------------------------------------------------------------YALHGVFSIKSD  149 (253)
Q Consensus       134 ~~~i----------------------------------------------------------------~~~~~~~~~~~D  149 (253)
                      ...+                                                                ......++.++|
T Consensus        89 ~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~D  168 (244)
T smart00220       89 ARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVD  168 (244)
T ss_pred             HHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhh
Confidence            0000                                                                011244677899


Q ss_pred             eeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCH
Q 043709          150 VFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTM  229 (253)
Q Consensus       150 iwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~  229 (253)
                      |||+|+++|++++|..||..... ...+....     ...... .      ..........+.+++.+||..+|++||++
T Consensus       169 i~slG~~l~~l~~~~~p~~~~~~-~~~~~~~~-----~~~~~~-~------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~  235 (244)
T smart00220      169 VWSLGVILYELLTGKPPFPGDDQ-LLELFKKI-----GKPKPP-F------PPPEWKISPEAKDLIRKLLVKDPEKRLTA  235 (244)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHH-----hccCCC-C------ccccccCCHHHHHHHHHHccCCchhccCH
Confidence            99999999999999998764211 11111111     000000 0      00000034578889999999999999999


Q ss_pred             HHHHH
Q 043709          230 LEIVS  234 (253)
Q Consensus       230 ~~il~  234 (253)
                      .++++
T Consensus       236 ~~~~~  240 (244)
T smart00220      236 EEALQ  240 (244)
T ss_pred             HHHhh
Confidence            99986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.8e-19  Score=146.31  Aligned_cols=187  Identities=17%  Similarity=0.176  Sum_probs=125.8

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccH----HHHHHHHHHHHhccCCCcceEeEEEE-e
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGL----EEFKNEMMLIAKLQDINLVRIIGCCV-E  100 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~----~~~~~E~~~l~~l~H~nIv~~~~~~~-~  100 (253)
                      ...++|-++.+||+|+|+.+++    ...+.||||+-...   ..+..    +...+|.++.+.|.||.||++|+++. +
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD  539 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence            3445788899999999999554    56778999987543   11222    33678999999999999999999986 5


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+..+-|+|||+|.+|+-||...+.   ++......|                                           
T Consensus       540 tdsFCTVLEYceGNDLDFYLKQhkl---mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITD  616 (775)
T KOG1151|consen  540 TDSFCTVLEYCEGNDLDFYLKQHKL---MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITD  616 (775)
T ss_pred             cccceeeeeecCCCchhHHHHhhhh---hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeee
Confidence            5778999999999999999843221   111100000                                           


Q ss_pred             ------------------------------------eee--cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhh
Q 043709          138 ------------------------------------YAL--HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG  179 (253)
Q Consensus       138 ------------------------------------~~~--~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~  179 (253)
                                                          +..  ....+.|+||||.|||+|+.+.|+.||.......+.+..
T Consensus       617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqe  696 (775)
T KOG1151|consen  617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQE  696 (775)
T ss_pred             cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhh
Confidence                                                111  234678999999999999999999998654433222211


Q ss_pred             hhhHhhhcCCCccccccc-cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          180 YVIWNLWNDGSLWDLMDP-MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..            ++.. ....+..+.+..+...+|.+||+.--++|.+..++..
T Consensus       697 NT------------IlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  697 NT------------ILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             hc------------hhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence            11            1111 1111222234456777888899999999988888763

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.76  E-value=4e-19  Score=132.77  Aligned_cols=207  Identities=16%  Similarity=0.258  Sum_probs=140.2

Q ss_pred             cccHHHHHH---HhcCccccCccccccccc----eEeeCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeE
Q 043709           25 FFSLASISA---ATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIG   96 (253)
Q Consensus        25 ~~~~~~l~~---~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~   96 (253)
                      .++++...+   ..++|++.+.+|+|.|+.    ....+++.++||+++.   -..+...+|+.+|..|+ ||||+++++
T Consensus        24 YWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~D  100 (338)
T KOG0668|consen   24 YWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLD  100 (338)
T ss_pred             hcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhh
Confidence            455555443   345799999999999998    3446788999999975   34567899999999997 999999999


Q ss_pred             EEEec--CeeEEEEeeCCCCChhhhcc----------------------------------------CCCCcCCCCccce
Q 043709           97 CCVEK--GVKILIYEHMPNKSLDYFLF----------------------------------------DPANKGRLGWGTR  134 (253)
Q Consensus        97 ~~~~~--~~~~lv~e~~~~g~L~~~l~----------------------------------------~~~~~~~~~~~~~  134 (253)
                      ...+.  ..+.+++||+.+-+...+..                                        ..++...++|+..
T Consensus       101 iV~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLA  180 (338)
T KOG0668|consen  101 IVKDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLA  180 (338)
T ss_pred             hhcCccccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchH
Confidence            98764  46889999999877765431                                        0111112233322


Q ss_pred             eee--------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh----------Hh
Q 043709          135 VRI--------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI----------WN  184 (253)
Q Consensus       135 ~~i--------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~----------~~  184 (253)
                      ...                    ......|+.+-|+|||||++..|+..+.||.....+.++++....          ..
T Consensus       181 EFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~  260 (338)
T KOG0668|consen  181 EFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN  260 (338)
T ss_pred             hhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence            111                    233456889999999999999999999999988887666655430          00


Q ss_pred             hh---cCCCccccccccCC--------CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 LW---NDGSLWDLMDPMLQ--------TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 ~~---~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..   -+.....++....+        .+...-...++++++.+.|..|-.+|+|+.|.++
T Consensus       261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence            00   01111111111111        1111123467889999999999999999999773

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.75  E-value=3.9e-19  Score=158.85  Aligned_cols=68  Identities=31%  Similarity=0.484  Sum_probs=56.6

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      .-..+|+.++.||+||||.|++    -+|..||||++... +...-....+|+.++.+|+|||||++|..|..
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVE  548 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVE  548 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhc
Confidence            3456899999999999999655    57899999999865 34445678999999999999999999987753

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.74  E-value=5.4e-18  Score=137.61  Aligned_cols=192  Identities=11%  Similarity=0.120  Sum_probs=109.3

Q ss_pred             hcCccccCccccccccceEee----C---CCEEEEEEecccccccH-----------HHHHHHHHHHHhccCCCcceEeE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL----N---GEQVAVKRLSSQSGQGL-----------EEFKNEMMLIAKLQDINLVRIIG   96 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~----~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~nIv~~~~   96 (253)
                      .++|++.+.||+|+||.+++.    +   +..+|+|+.........           .....+...+..+.|+||+++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            367999999999999996652    2   44566765443221110           11223334455678999999999


Q ss_pred             EEEecC----eeEEEEeeCCCCChhhhccCCC-------------------------------CcC-----------CCC
Q 043709           97 CCVEKG----VKILIYEHMPNKSLDYFLFDPA-------------------------------NKG-----------RLG  130 (253)
Q Consensus        97 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~-------------------------------~~~-----------~~~  130 (253)
                      ++....    ..+++++++.. ++.+.+....                               +..           ..+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~D  169 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIID  169 (294)
T ss_pred             eeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEE
Confidence            776543    34677777643 3333321100                               000           000


Q ss_pred             ccceeee---------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhH
Q 043709          131 WGTRVRI---------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIW  183 (253)
Q Consensus       131 ~~~~~~i---------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~  183 (253)
                      +.....+                           ...+..++.++|||||||++|||++|..||......... ......
T Consensus       170 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~-~~~~~~  248 (294)
T PHA02882        170 YGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL-IHAAKC  248 (294)
T ss_pred             cCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH-HHHhHH
Confidence            0000000                           122344788999999999999999999999765332211 111100


Q ss_pred             hhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 043709          184 NLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML  236 (253)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L  236 (253)
                      ...     .++......   ....+..+.+++..||..+|++||++++|++.|
T Consensus       249 ~~~-----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        249 DFI-----KRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHH-----HHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            000     000001000   011235677788889999999999999999876

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.73  E-value=2.6e-19  Score=137.04  Aligned_cols=187  Identities=19%  Similarity=0.253  Sum_probs=131.8

Q ss_pred             ccccCccccccccc--eEeeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           38 FSMENKLGEGGFGP--GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        38 ~~~~~~ig~G~fg~--~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.+..+|.+...|.  ...+.|..+++|++...  +......|..|.-.|+.++||||+.++|.|.+..++.++..|++.
T Consensus       192 lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~  271 (448)
T KOG0195|consen  192 LNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF  271 (448)
T ss_pred             hhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence            33445566666666  56688889999988643  344446789999999999999999999999999999999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee-----------------------------------------------e--------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------Y--------  138 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------~--------  138 (253)
                      |+|..++++.... ..+-.+.++.                                               .        
T Consensus       272 gslynvlhe~t~v-vvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~p  350 (448)
T KOG0195|consen  272 GSLYNVLHEQTSV-VVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSP  350 (448)
T ss_pred             hHHHHHHhcCccE-EEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCc
Confidence            9999999654322 1111111111                                               0        


Q ss_pred             -------eecCc---cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          139 -------ALHGV---FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       139 -------~~~~~---~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                             +...+   --.++|+|||++++||+.|+.-||...++-+               ....+.-..++...++...
T Consensus       351 awmspealqrkped~n~raadmwsfaillwel~trevpfadlspme---------------cgmkialeglrv~ippgis  415 (448)
T KOG0195|consen  351 AWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME---------------CGMKIALEGLRVHIPPGIS  415 (448)
T ss_pred             ccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh---------------hhhhhhhccccccCCCCcc
Confidence                   01111   1246899999999999999999986554422               1222333344444444555


Q ss_pred             HHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          209 KRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ..+.+|+.-|+..||.+||.++.|+-.|+...
T Consensus       416 ~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  416 RHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            66777777799999999999999999888753

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.71  E-value=1.8e-18  Score=143.17  Aligned_cols=175  Identities=17%  Similarity=0.162  Sum_probs=128.1

Q ss_pred             CccccccccceE----eeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCC
Q 043709           42 NKLGEGGFGPGK----LLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKS  115 (253)
Q Consensus        42 ~~ig~G~fg~~~----~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~  115 (253)
                      +.||+|.||.++    ..+|+.||||++.+.  .......+..|+.+|.++.||.||++-..|.+.+.+++|||-+.|.-
T Consensus       570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDM  649 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDM  649 (888)
T ss_pred             hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchH
Confidence            689999999944    478999999999865  33444678999999999999999999999999999999999998655


Q ss_pred             hhhhccCCCCcCCCCcccee----ee------------------------------------------------------
Q 043709          116 LDYFLFDPANKGRLGWGTRV----RI------------------------------------------------------  137 (253)
Q Consensus       116 L~~~l~~~~~~~~~~~~~~~----~i------------------------------------------------------  137 (253)
                      |+-+|...+.  .++.....    +|                                                      
T Consensus       650 LEMILSsEkg--RL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV  727 (888)
T KOG4236|consen  650 LEMILSSEKG--RLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV  727 (888)
T ss_pred             HHHHHHhhcc--cchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence            5555522110  11110000    00                                                      


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ++..+.|+.+-|+||.|+|+|.-++|..||.-++...+++..               ..-.+...+..++.
T Consensus       728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQN---------------AaFMyPp~PW~eis  792 (888)
T KOG4236|consen  728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQN---------------AAFMYPPNPWSEIS  792 (888)
T ss_pred             CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhc---------------cccccCCCchhhcC
Confidence                     456677999999999999999999999998755443332211               11233344445566


Q ss_pred             HHHHHHhccccCCCCCCCCCHHHHH
Q 043709          209 KRYSNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      ...++||...|+..=.+|-|.++-+
T Consensus       793 ~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  793 PEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             HHHHHHHHHHHHHHHHHhcchHhhc
Confidence            7788888889998889999988765

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.70  E-value=3e-18  Score=139.25  Aligned_cols=182  Identities=19%  Similarity=0.205  Sum_probs=127.0

Q ss_pred             hcCccccCccccccccce----EeeCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPG----KLLNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~----~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .+.|+.-+.||+|+||.+    ...+|+.||.|++.+.   ........+.|..+|.+++.+.||.+--.+.+++.+++|
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            356888899999999993    3478999999999754   233445678999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCcccee----------------ee----------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRV----------------RI----------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~----------------~i----------------------------------  137 (253)
                      +..+.||||.-.|-+.... ..+.....                .|                                  
T Consensus       264 LtlMNGGDLkfHiyn~g~~-gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~  342 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNP-GFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP  342 (591)
T ss_pred             EEeecCCceeEEeeccCCC-CCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCc
Confidence            9999999999888332211 11111000                00                                  


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ++..+.|+.+.|-||+||++|||+.|+.||........            ..++.+..-. -.-+.
T Consensus       343 ~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk------------~eEvdrr~~~-~~~ey  409 (591)
T KOG0986|consen  343 IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK------------REEVDRRTLE-DPEEY  409 (591)
T ss_pred             cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh------------HHHHHHHHhc-chhhc
Confidence                          44566799999999999999999999999863322110            0011000000 01122


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTML  230 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~  230 (253)
                      +...++++..+....|..||++|-...
T Consensus       410 ~~kFS~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  410 SDKFSEEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             ccccCHHHHHHHHHHHccCHHHhccCC
Confidence            234556677777778999999986543

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.70  E-value=2e-18  Score=137.42  Aligned_cols=197  Identities=18%  Similarity=0.181  Sum_probs=126.5

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-C-C----CcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-D-I----NLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~----nIv~~~~~~~~~~~~  104 (253)
                      ++.|.++..+|+|+||++..    .++..||||+++... .-.+..+-|++++.++. + |    -+|++.+++.-.++.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi  166 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI  166 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence            67899999999999999332    457899999998542 23355678999999984 2 2    367777888889999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccce--------------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTR--------------------------------------------------  134 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~--------------------------------------------------  134 (253)
                      +||.|.+. -++.+++....-. +.+....                                                  
T Consensus       167 CivfellG-~S~~dFlk~N~y~-~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r  244 (415)
T KOG0671|consen  167 CIVFELLG-LSTFDFLKENNYI-PFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIR  244 (415)
T ss_pred             EEEEeccC-hhHHHHhccCCcc-ccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceec
Confidence            99999884 3788887331100 0000000                                                  


Q ss_pred             ------eee--------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC-cchhhhh
Q 043709          135 ------VRI--------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS-LTLLGYV  181 (253)
Q Consensus       135 ------~~i--------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~-~~~~~~~  181 (253)
                            +++                          ++++-.++..+||||+||||+|+.+|..-|+.-+..+ ..+.+.+
T Consensus       245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI  324 (415)
T KOG0671|consen  245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI  324 (415)
T ss_pred             cCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence                  000                          4566679999999999999999999999887655321 1122221


Q ss_pred             hH------------hh-hcCCCc--ccc------------ccc-cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 043709          182 IW------------NL-WNDGSL--WDL------------MDP-MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       182 ~~------------~~-~~~~~~--~~~------------~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      ..            .. ...+.+  .+.            ..+ .............+.+|+.++|..||.+|+|+.|++
T Consensus       325 lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL  404 (415)
T KOG0671|consen  325 LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL  404 (415)
T ss_pred             hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence            00            00 000000  000            000 000111123445699999999999999999999987


Q ss_pred             H
Q 043709          234 S  234 (253)
Q Consensus       234 ~  234 (253)
                      .
T Consensus       405 ~  405 (415)
T KOG0671|consen  405 S  405 (415)
T ss_pred             c
Confidence            4

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.69  E-value=3.9e-17  Score=137.92  Aligned_cols=85  Identities=20%  Similarity=0.254  Sum_probs=73.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +-|..++.||-|+||++++    .+...||.|.+++.+   ...+.....|-.||....++.||+||-.|.+++.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            3488889999999999665    567789999998653   333455778999999999999999999999999999999


Q ss_pred             eeCCCCChhhhc
Q 043709          109 EHMPNKSLDYFL  120 (253)
Q Consensus       109 e~~~~g~L~~~l  120 (253)
                      +|++|||+-.+|
T Consensus       709 dYIPGGDmMSLL  720 (1034)
T KOG0608|consen  709 DYIPGGDMMSLL  720 (1034)
T ss_pred             eccCCccHHHHH
Confidence            999999998877

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.68  E-value=9.3e-17  Score=143.58  Aligned_cols=85  Identities=18%  Similarity=0.199  Sum_probs=73.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|.+.+.||+|+||.+++    .+++.||||++....   ......+..|+.+++.++||||+++++++...+.+++||
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            5799999999999999655    358899999997542   233467889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhc
Q 043709          109 EHMPNKSLDYFL  120 (253)
Q Consensus       109 e~~~~g~L~~~l  120 (253)
                      ||+.+|+|..++
T Consensus        84 Ey~~g~~L~~li   95 (669)
T cd05610          84 EYLIGGDVKSLL   95 (669)
T ss_pred             eCCCCCCHHHHH
Confidence            999999997765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.68  E-value=1.5e-17  Score=122.46  Aligned_cols=151  Identities=22%  Similarity=0.315  Sum_probs=110.9

Q ss_pred             CcccccHHHHHHHhcCccccCccccccccc----eEeeCCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEe
Q 043709           22 CIPFFSLASISAATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRII   95 (253)
Q Consensus        22 ~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~   95 (253)
                      ..-....+.+.+..+++.-++.||+|++|.    .+..+|..+|+|.+... ..+...+.++|+.+.... ..|.+|.+|
T Consensus        32 a~i~I~~~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~Fy  111 (282)
T KOG0984|consen   32 ALIYIGDRNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFY  111 (282)
T ss_pred             ceEEEecCccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEee
Confidence            444455556777888888899999999998    55689999999999865 455667889999887765 799999999


Q ss_pred             EEEEecCeeEEEEeeCCCCChhhhccCCC-CcCCCCccc-------------------------------------eeee
Q 043709           96 GCCVEKGVKILIYEHMPNKSLDYFLFDPA-NKGRLGWGT-------------------------------------RVRI  137 (253)
Q Consensus        96 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~-------------------------------------~~~i  137 (253)
                      |.......+|+.||.+.. +|+.+-++-. +.+.++...                                     .+.+
T Consensus       112 Ga~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKi  190 (282)
T KOG0984|consen  112 GALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKI  190 (282)
T ss_pred             hhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEE
Confidence            999999999999998874 6655431100 000111100                                     0000


Q ss_pred             --------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC
Q 043709          138 --------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN  173 (253)
Q Consensus       138 --------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~  173 (253)
                                                      ......|+.++||||||+++.||.+++.|++.....
T Consensus       191 CDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp  258 (282)
T KOG0984|consen  191 CDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP  258 (282)
T ss_pred             cccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence                                            234457999999999999999999999998766544

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=4.9e-17  Score=128.05  Aligned_cols=184  Identities=12%  Similarity=0.207  Sum_probs=126.3

Q ss_pred             HhcCccccCccccccccc----eEeeCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..++|.+++.||+|+|++    ..+.+.+.||+|++++.   ..+..+....|..+..+. +||.+|.++.++.+...++
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf  327 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF  327 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence            345899999999999999    33478899999999864   456667788888888887 5999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCC-------------CCccceeee-----------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGR-------------LGWGTRVRI-----------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~-------------~~~~~~~~i-----------------------------------  137 (253)
                      +|.||++||+|--.+++.++...             +.+.....|                                   
T Consensus       328 fvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~  407 (593)
T KOG0695|consen  328 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT  407 (593)
T ss_pred             EEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc
Confidence            99999999999766643322110             000000000                                   


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc--chhhhhhHhhhcCCCccccccccCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL--TLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                    .+.+..|+.++|-|++|++|+||..|+.||+.....+.  ....+. .......        .+  
T Consensus       408 tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedyl-fqvilek--------qi--  476 (593)
T KOG0695|consen  408 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYL-FQVILEK--------QI--  476 (593)
T ss_pred             cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHH-HHHHhhh--------cc--
Confidence                          44566799999999999999999999999986654422  111222 1111111        11  


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCC
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPT  228 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs  228 (253)
                      ..+..++-+...++..-+..||.+|..
T Consensus       477 riprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  477 RIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             cccceeehhhHHHHHHhhcCCcHHhcC
Confidence            111222334455566688889998853

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=9.2e-19  Score=144.09  Aligned_cols=178  Identities=20%  Similarity=0.218  Sum_probs=126.8

Q ss_pred             HhcCccccCccccccccceEe--eCCC--EEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL--LNGE--QVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~--~~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .-++++.+..||-|+||.+.+  ..++  .+|+|++++.   +....+....|-++|.+++.|.||++|..+.+...+|+
T Consensus       418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm  497 (732)
T KOG0614|consen  418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM  497 (732)
T ss_pred             chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence            345778888999999999444  2222  3889988764   34445678899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      .||-|-||.|...++.+.....  ...++.+                                                 
T Consensus       498 LmEaClGGElWTiLrdRg~Fdd--~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K  575 (732)
T KOG0614|consen  498 LMEACLGGELWTILRDRGSFDD--YTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK  575 (732)
T ss_pred             hHHhhcCchhhhhhhhcCCccc--chhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence            9999999999999965332211  0001100                                                 


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    .++....+.++|.||||+++|||++|.+||....+-  ...     +..        +...-...+
T Consensus       576 TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm--ktY-----n~I--------LkGid~i~~  640 (732)
T KOG0614|consen  576 TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM--KTY-----NLI--------LKGIDKIEF  640 (732)
T ss_pred             eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH--HHH-----HHH--------Hhhhhhhhc
Confidence                          455666788999999999999999999998755432  111     111        111111233


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCC
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPT  228 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs  228 (253)
                      +..+.+...+|+.+.+..+|.+|-.
T Consensus       641 Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  641 PRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             ccccchhHHHHHHHHHhcCcHhhhc
Confidence            3445567778888888999999975

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.64  E-value=3.8e-16  Score=133.93  Aligned_cols=89  Identities=22%  Similarity=0.334  Sum_probs=64.7

Q ss_pred             HhcCccccCccccccccceEee--------------------CCCEEEEEEecccccccHHH--------------HHHH
Q 043709           34 ATDNFSMENKLGEGGFGPGKLL--------------------NGEQVAVKRLSSQSGQGLEE--------------FKNE   79 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~~--------------------~~~~vavK~~~~~~~~~~~~--------------~~~E   79 (253)
                      ..++|++.+.||+|+||.+++.                    .++.||||++........+.              ...|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            3568999999999999996642                    34679999997543322233              3446


Q ss_pred             HHHHHhccCCCc-----ceEeEEEEe--------cCeeEEEEeeCCCCChhhhccC
Q 043709           80 MMLIAKLQDINL-----VRIIGCCVE--------KGVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus        80 ~~~l~~l~H~nI-----v~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      +.++..++|.++     ++++++|..        ++..++||||+++|+|.++++.
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~  278 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDG  278 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhh
Confidence            777777766554     667777653        3568999999999999998853

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.64  E-value=4e-18  Score=129.16  Aligned_cols=195  Identities=14%  Similarity=0.152  Sum_probs=123.0

Q ss_pred             cCccccCccccccccc----eEeeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec--------
Q 043709           36 DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--------  101 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--------  101 (253)
                      +.|+....||+|.||.    ....+++.||+|++-..  ...--...++|+.+|..+.|+|+++++..|...        
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            4577778999999997    45577888999877543  223335689999999999999999999888632        


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------  137 (253)
                      ..+|+|+++|.+ +|.-+|.+....  +....+..+                                            
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn~~vr--~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~  173 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSNRKVR--FSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA  173 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcCcccc--ccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence            348999999986 776666322111  000000000                                            


Q ss_pred             --------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhH--hhhcCC
Q 043709          138 --------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIW--NLWNDG  189 (253)
Q Consensus       138 --------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~--~~~~~~  189 (253)
                                                .+....|+++.|||.-||++.||.++.+-+......  ..+..+..  ......
T Consensus       174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq--qql~~Is~LcGs~tke  251 (376)
T KOG0669|consen  174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ--QQLHLISQLCGSITKE  251 (376)
T ss_pred             eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH--HHHHHHHHHhccCCcc
Confidence                                      344567999999999999999999998776543321  11111100  111111


Q ss_pred             Ccc--------cccccc-CCCCC---CHHHH------HHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          190 SLW--------DLMDPM-LQTEA---SYPIL------KRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       190 ~~~--------~~~~~~-~~~~~---~~~~~------~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      -++        +.+... +....   ..+..      ....+|+..++..||.+|++++++++.
T Consensus       252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            111        111000 10000   01111      257788999999999999999998853

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.64  E-value=7.2e-17  Score=139.74  Aligned_cols=178  Identities=17%  Similarity=0.156  Sum_probs=118.5

Q ss_pred             CccccCccccccccc-eE--eeCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           37 NFSMENKLGEGGFGP-GK--LLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~-~~--~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      -|.-.+.+|.|+-|+ ++  ...++.||||++-.   +......+|+..|+.- .|||||++||.-.+....||..|.|.
T Consensus       510 ~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~  586 (903)
T KOG1027|consen  510 FFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA  586 (903)
T ss_pred             eeccHHHcccCCCCcEEEEEeeCCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence            355557789999999 33  36799999999975   3334678999999998 59999999999999999999999997


Q ss_pred             CCChhhhccCCCCcC-CCC----ccc-------------------------------------eeee-------------
Q 043709          113 NKSLDYFLFDPANKG-RLG----WGT-------------------------------------RVRI-------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~-~~~----~~~-------------------------------------~~~i-------------  137 (253)
                       .+|.+++....... ...    +..                                     +..|             
T Consensus       587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~  665 (903)
T KOG1027|consen  587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK  665 (903)
T ss_pred             -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence             69999985420000 000    000                                     0000             


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhC-CCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSS-KKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         .+....-+.++||+|+||++|..++| ..||......+..++...       ..+ ..+  
T Consensus       666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~-------~~L-~~L--  735 (903)
T KOG1027|consen  666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN-------YTL-VHL--  735 (903)
T ss_pred             chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc-------cce-eee--
Confidence                               11222234578999999999999988 677754333222221110       001 001  


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        ...  .+.  ...+||.+|+..+|..||++.+|+.
T Consensus       736 --~~~--~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  736 --EPL--PDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             --ccC--chH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence              111  111  6778999999999999999999874

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.62  E-value=2.3e-15  Score=115.26  Aligned_cols=79  Identities=33%  Similarity=0.501  Sum_probs=67.0

Q ss_pred             cccccccceEe----eCCCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCChhh
Q 043709           44 LGEGGFGPGKL----LNGEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDY  118 (253)
Q Consensus        44 ig~G~fg~~~~----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~  118 (253)
                      ||+|++|.+++    .+++.+++|++...... ..+.+.+|+..++.++|++|+++++++......++++||+.+++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            68899998443    23889999999865322 45789999999999999999999999999899999999999999999


Q ss_pred             hccC
Q 043709          119 FLFD  122 (253)
Q Consensus       119 ~l~~  122 (253)
                      ++..
T Consensus        81 ~~~~   84 (215)
T cd00180          81 LLKE   84 (215)
T ss_pred             HHHh
Confidence            8843

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.61  E-value=1.2e-16  Score=132.21  Aligned_cols=200  Identities=15%  Similarity=0.117  Sum_probs=132.6

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc------CCCcceEeEEEEecC
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ------DINLVRIIGCCVEKG  102 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~nIv~~~~~~~~~~  102 (253)
                      ..-+.|.+....|+|-|++|+.    ..+..||||++... .-..+.-++|+++|++|.      --|+++++..|...+
T Consensus       429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn  507 (752)
T KOG0670|consen  429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN  507 (752)
T ss_pred             hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence            3445788888899999999554    45779999999853 233456789999999984      348999999999999


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------  137 (253)
                      +++||+|-.. -+|.++|..-.....+........                                             
T Consensus       508 HLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~  586 (752)
T KOG0670|consen  508 HLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASF  586 (752)
T ss_pred             eeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccc
Confidence            9999999876 488888843221111111110000                                             


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhh-----hh---------hHh
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG-----YV---------IWN  184 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~-----~~---------~~~  184 (253)
                                         .+++..|+...|+||.||+||||.||+..|++...+.+--+.     ..         +..
T Consensus       587 ~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~d  666 (752)
T KOG0670|consen  587 ASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKD  666 (752)
T ss_pred             cccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhh
Confidence                               567888999999999999999999999988765443211000     00         000


Q ss_pred             hh---------------cCCCccccccccC--------------CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 LW---------------NDGSLWDLMDPML--------------QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 ~~---------------~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+               .......++....              ..+.....+..+.+|+..|+..||++|.|..+.|.
T Consensus       667 qHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  667 QHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             hhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            00               0000000000000              11222345677899999999999999999999775

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.60  E-value=2.1e-15  Score=132.02  Aligned_cols=85  Identities=18%  Similarity=0.242  Sum_probs=53.6

Q ss_pred             HhcCccccCccccccccceEe----eC----CCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEE------EE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LN----GEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGC------CV   99 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~------~~   99 (253)
                      ..++|++.+.||+|+||.+++    .+    +..||+|++.....  .+....+ . ++...+.++..+...      +.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e-~-l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE-R-VRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH-H-HHhhchhhHHHHHHhhhcccccc
Confidence            557899999999999999665    34    78999999864321  1111111 1 111122222222211      23


Q ss_pred             ecCeeEEEEeeCCCCChhhhccC
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~  122 (253)
                      ..+..++++||+.+++|.+++..
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~  228 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQS  228 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHh
Confidence            45679999999999999887743

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.55  E-value=1.2e-14  Score=112.73  Aligned_cols=85  Identities=33%  Similarity=0.457  Sum_probs=73.1

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEecccccc-cHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQ-GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      |.+.+.||.|++|.++.    .+++.+|+|.+...... ..+.+.+|+..++.++|+|++++++++...+..++++||++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            56778999999999443    34788999999876444 67789999999999999999999999999899999999999


Q ss_pred             CCChhhhccC
Q 043709          113 NKSLDYFLFD  122 (253)
Q Consensus       113 ~g~L~~~l~~  122 (253)
                      +++|.+++..
T Consensus        81 ~~~L~~~~~~   90 (225)
T smart00221       81 GGDLFDYLRK   90 (225)
T ss_pred             CCCHHHHHHh
Confidence            9999998854

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.55  E-value=6.2e-16  Score=118.49  Aligned_cols=184  Identities=15%  Similarity=0.188  Sum_probs=121.9

Q ss_pred             HhcCccccCccccccccc----eEeeCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeE-EEEecCeeEEE
Q 043709           34 ATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIG-CCVEKGVKILI  107 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~-~~~~~~~~~lv  107 (253)
                      ..+.|.+.+.+|+|-||+    .+..+++.+++|.+... .....+|.+|...--.| .|.||+.-|+ .+.+.+.+.++
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~  100 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV  100 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence            346799999999999999    45578899999999752 34557899998765566 4999998875 45667888999


Q ss_pred             EeeCCCCChhhhccCCCCc-----------------------CCCCcc-----------ceeee----------------
Q 043709          108 YEHMPNKSLDYFLFDPANK-----------------------GRLGWG-----------TRVRI----------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~-----------------------~~~~~~-----------~~~~i----------------  137 (253)
                      +||++.|+|.+-+....-.                       ...+..           .++.+                
T Consensus       101 qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~  180 (378)
T KOG1345|consen  101 QEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL  180 (378)
T ss_pred             eccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhh
Confidence            9999999998877211000                       000000           00000                


Q ss_pred             -------------eeecC--ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 -------------YALHG--VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 -------------~~~~~--~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                   ....+  ..++.+|+|.||+++|.+++|+.||+.+...+.....+-+|..   +.....+      .
T Consensus       181 ~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~---rk~~~~P------~  251 (378)
T KOG1345|consen  181 EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLK---RKNPALP------K  251 (378)
T ss_pred             hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhc---ccCccCc------h
Confidence                         11111  2567899999999999999999999977666655555443333   2222111      1


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCC
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRP  227 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RP  227 (253)
                      ........+.++..+-+..+|++|=
T Consensus       252 ~F~~fs~~a~r~Fkk~lt~~~~drc  276 (378)
T KOG1345|consen  252 KFNPFSEKALRLFKKSLTPRFKDRC  276 (378)
T ss_pred             hhcccCHHHHHHHHHhcCCcccccc
Confidence            1223345566666667888888883

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=1e-13  Score=114.03  Aligned_cols=83  Identities=22%  Similarity=0.310  Sum_probs=64.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-----C---CCcceEeEEEEec--
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-----D---INLVRIIGCCVEK--  101 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~nIv~~~~~~~~~--  101 (253)
                      .+|.+.++||=|.|++|.+    ...+.||+|+.+.. .--.+..+.|+++|++++     |   .+||++++.|...  
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            5799999999999999766    46789999999853 233466889999999883     2   3799999999753  


Q ss_pred             --CeeEEEEeeCCCCChhhhc
Q 043709          102 --GVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus       102 --~~~~lv~e~~~~g~L~~~l  120 (253)
                        .+++||+|+... +|-.+|
T Consensus       157 NG~HVCMVfEvLGd-nLLklI  176 (590)
T KOG1290|consen  157 NGQHVCMVFEVLGD-NLLKLI  176 (590)
T ss_pred             CCcEEEEEehhhhh-HHHHHH
Confidence              479999999864 565555

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.44  E-value=3.4e-13  Score=109.04  Aligned_cols=88  Identities=18%  Similarity=0.333  Sum_probs=74.1

Q ss_pred             HHHHhcCccccCccccccccceEe----e---CCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecC
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL----L---NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKG  102 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~----~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~  102 (253)
                      +....+.|..++.||+|+|+.+++    .   ..+.||+|.+...  +...+...|+++|..+. +.||+++.+++...+
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            334556799999999999999554    2   5678999999754  34457899999999995 999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhc
Q 043709          103 VKILIYEHMPNKSLDYFL  120 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l  120 (253)
                      .+.+|+||.++.+..++.
T Consensus       109 ~v~ivlp~~~H~~f~~l~  126 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLY  126 (418)
T ss_pred             eeEEEecccCccCHHHHH
Confidence            999999999998887776

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.42  E-value=3.3e-13  Score=113.79  Aligned_cols=150  Identities=21%  Similarity=0.241  Sum_probs=102.5

Q ss_pred             HHhccCCCcceEeEEEEecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------
Q 043709           83 IAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------  137 (253)
Q Consensus        83 l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------  137 (253)
                      |+.+.|.|+.+++|.+.+++..++|.+||..|+|.+.+.....  .+++.-...+                         
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~--~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~   78 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI--KLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS   78 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc--CccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence            4678999999999999999999999999999999999843111  1111100000                         


Q ss_pred             --------------------------------------------------eeecCccccccceeehhHHHHHHHhCCCCc
Q 043709          138 --------------------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNA  167 (253)
Q Consensus       138 --------------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~  167 (253)
                                                                        .......+.+.||||||++++|++++..||
T Consensus        79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~  158 (484)
T KOG1023|consen   79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF  158 (484)
T ss_pred             cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence                                                              000112567799999999999999999999


Q ss_pred             CcCCCCCc--chhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          168 HFYNTNSL--TLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       168 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      ........  +++..+    ..  .....+.|.+....  .....+..++..||..+|+.||++++|-..++.+...
T Consensus       159 ~~~~~~~~~~eii~~~----~~--~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  159 DLRNLVEDPDEIILRV----KK--GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             ccccccCChHHHHHHH----Hh--cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            87655533  333332    11  12222333322111  3334688888999999999999999999988877643

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.41  E-value=4.7e-14  Score=118.28  Aligned_cols=87  Identities=20%  Similarity=0.291  Sum_probs=70.0

Q ss_pred             HhcCccccCccccccccc----eEeeCCCEEEEEEecccc--------cccHHHHHHHHHHHHhcc---CCCcceEeEEE
Q 043709           34 ATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQS--------GQGLEEFKNEMMLIAKLQ---DINLVRIIGCC   98 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---H~nIv~~~~~~   98 (253)
                      ...+|+.++.+|+|+||.    .++.....|+||.+.+..        .......-.|+.+|..++   |+||+++++++
T Consensus       559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF  638 (772)
T KOG1152|consen  559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF  638 (772)
T ss_pred             ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence            345799999999999999    444667789999997531        122233557999999986   99999999999


Q ss_pred             EecCeeEEEEeeCC-CCChhhhc
Q 043709           99 VEKGVKILIYEHMP-NKSLDYFL  120 (253)
Q Consensus        99 ~~~~~~~lv~e~~~-~g~L~~~l  120 (253)
                      .+++.+||+||-.. +-+|.++|
T Consensus       639 Eddd~yyl~te~hg~gIDLFd~I  661 (772)
T KOG1152|consen  639 EDDDYYYLETEVHGEGIDLFDFI  661 (772)
T ss_pred             ecCCeeEEEecCCCCCcchhhhh
Confidence            99999999998654 67888888

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.40  E-value=1.7e-13  Score=102.66  Aligned_cols=101  Identities=13%  Similarity=0.111  Sum_probs=63.5

Q ss_pred             CCccceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          129 LGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       129 ~~~~~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                      ..|..+.  .+.+..|+.++|||||||++|||++|..||........ ....+..... ..      .+.. ........
T Consensus        68 ~~y~aPE--~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~-~~~~~~~~~~-~~------~~~~-~~~~~~~~  136 (176)
T smart00750       68 PYFMAPE--VIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA-ILEILLNGMP-AD------DPRD-RSNLESVS  136 (176)
T ss_pred             ccccChH--HhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH-HHHHHHHHhc-cC------Cccc-cccHHHHH
Confidence            3444444  44567789999999999999999999999854332111 1111101100 00      0000 01112222


Q ss_pred             H--HHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          209 K--RYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       209 ~--~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      .  .+.+++.+||..+|++||++.++++.+....
T Consensus       137 ~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      137 AARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             hhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            2  5888999999999999999999998876553

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.33  E-value=6.9e-13  Score=103.95  Aligned_cols=197  Identities=14%  Similarity=0.116  Sum_probs=118.7

Q ss_pred             cCccccCccccccccc---eEeeCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec------Cee
Q 043709           36 DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK------GVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~---~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~------~~~  104 (253)
                      .+|.-++.+|.|+-..   -..-.++.||+|++...  .....++..+|..++..+.|+||+.++.++.-.      ..+
T Consensus        17 ~Ry~nL~p~~~g~~~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   17 KRYVNLKPIGSGAQIVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeeeecccCCCCceEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence            3566666777776622   22356889999988643  233456788999999999999999999998633      358


Q ss_pred             EEEEeeCCCCChhhhccCCC-----------------------------CcCC--CCccceeee----------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPA-----------------------------NKGR--LGWGTRVRI----------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~-----------------------------~~~~--~~~~~~~~i----------------  137 (253)
                      |+||||+. ++|.+++.-..                             +...  +.......+                
T Consensus        97 y~v~e~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mt  175 (369)
T KOG0665|consen   97 YLVMELMD-ANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMT  175 (369)
T ss_pred             HHHHHhhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccccC
Confidence            99999997 58877762100                             0000  000001111                


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhh-----------------hHhhhc-
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYV-----------------IWNLWN-  187 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~-----------------~~~~~~-  187 (253)
                                  ++.+-.|.+.+||||.||++.||++|+--|.+....+ ++...+                 ..+... 
T Consensus       176 pyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~id-Q~~ki~~~lgtpd~~F~~qL~~~~r~yv~~  254 (369)
T KOG0665|consen  176 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHID-QWNKIIEQLGTPDPSFMKQLQPTVRNYVEN  254 (369)
T ss_pred             chhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHH-HHHHHHHHhcCCCHHHHHHhhHHHHHHhhc
Confidence                        3344448999999999999999999998776433211 111100                 000000 


Q ss_pred             -C----CCccccc-cccCCCC--CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          188 -D----GSLWDLM-DPMLQTE--ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       188 -~----~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       .    ....+.+ +..+...  ........+.+++.+||-.||++|.|++++|.
T Consensus       255 ~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  255 RPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             ChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence             0    0011111 1111111  11122344677888899999999999999986

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.17  E-value=2.6e-11  Score=93.50  Aligned_cols=88  Identities=9%  Similarity=0.053  Sum_probs=69.3

Q ss_pred             HHhcCccccCccccccccceEe--eCCCEEEEEEecccccccH---HH------HHHHHHHHHhccCCCcceEeEEEEec
Q 043709           33 AATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGL---EE------FKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~---~~------~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      ...++|...+.+|.|+||.+++  .++..+|||.+........   +.      +.+|+..+.++.|++|..+..++...
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            3567899999999999999665  3466899999975422222   22      68999999999999999999886533


Q ss_pred             --------CeeEEEEeeCCCCChhhhc
Q 043709          102 --------GVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus       102 --------~~~~lv~e~~~~g~L~~~l  120 (253)
                              +..+++|||++|.+|.++.
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhh
Confidence                    3589999999999997764

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.16  E-value=5.5e-12  Score=97.24  Aligned_cols=136  Identities=17%  Similarity=0.244  Sum_probs=93.3

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC-----eeE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-----VKI  105 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-----~~~  105 (253)
                      +.+..+.||=|+||.+..    .+|+.||.|++...  +-..-+++.+|+.+|.-++|.|++..++...-.+     .+|
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence            566778899999998554    56899999999754  2233467999999999999999999988765432     356


Q ss_pred             EEEeeCCCCChhhhccCCC-------------------------------CcCCCC--ccceeee---------------
Q 043709          106 LIYEHMPNKSLDYFLFDPA-------------------------------NKGRLG--WGTRVRI---------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~-------------------------------~~~~~~--~~~~~~i---------------  137 (253)
                      ++.|++.. +|..+|-+..                               +.+.+-  -...+.|               
T Consensus       134 V~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~  212 (449)
T KOG0664|consen  134 VLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL  212 (449)
T ss_pred             HHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence            77777653 6655552211                               111110  0111111               


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN  173 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~  173 (253)
                                      ......|+.++||||.||++.|++-++.-|....+.
T Consensus       213 hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi  264 (449)
T KOG0664|consen  213 NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI  264 (449)
T ss_pred             hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH
Confidence                            223346899999999999999999999888766554

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.00  E-value=4.9e-09  Score=86.26  Aligned_cols=203  Identities=18%  Similarity=0.216  Sum_probs=125.7

Q ss_pred             CccccCccccccccceEeeC-----CCEEEEEEecccccccHHHHHHHHHHHHhccC----CCcceEeEEE-EecCeeEE
Q 043709           37 NFSMENKLGEGGFGPGKLLN-----GEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQD----INLVRIIGCC-VEKGVKIL  106 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~~~-----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~~~~~~-~~~~~~~l  106 (253)
                      .|.+.+.||+|+||.++...     ...+|+|............+..|..++..+.+    +++.++++.. .....-++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            79999999999999966532     24688888875433332368889999998862    6899999888 47778899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||+.+. -+|.++..... ...++..+...+                                                 
T Consensus        99 VM~l~G-~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~  176 (322)
T KOG1164|consen   99 VMSLLG-PSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR  176 (322)
T ss_pred             EEeccC-ccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence            999875 58877652211 111111111110                                                 


Q ss_pred             -------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh
Q 043709          138 -------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW  186 (253)
Q Consensus       138 -------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~  186 (253)
                                                     .......+.+.|+||++-++.|++.|..||........  ........ 
T Consensus       177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~--~~~~~~~~-  253 (322)
T KOG1164|consen  177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL--KSKFEKDP-  253 (322)
T ss_pred             ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch--HHHHHHHh-
Confidence                                           11222345678999999999999999999865543321  11110000 


Q ss_pred             cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          187 NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                      ...    ....     .....+..+..+...+-..+...+|....+...|++.......+..-+|.|
T Consensus       254 ~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw  311 (322)
T KOG1164|consen  254 RKL----LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDW  311 (322)
T ss_pred             hhh----cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcc
Confidence            000    0000     111112233333333555799999999999999988887665555555554

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.97  E-value=1.5e-09  Score=89.87  Aligned_cols=86  Identities=19%  Similarity=0.182  Sum_probs=66.2

Q ss_pred             HHHHHHhcCccccCccccccccceEee-----CCCEEEEEEeccc-----ccccHHHHHHHHHHHHhccCCCcce-EeEE
Q 043709           29 ASISAATDNFSMENKLGEGGFGPGKLL-----NGEQVAVKRLSSQ-----SGQGLEEFKNEMMLIAKLQDINLVR-IIGC   97 (253)
Q Consensus        29 ~~l~~~~~~~~~~~~ig~G~fg~~~~~-----~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~-~~~~   97 (253)
                      +.......+|.+.+.||+|+||++++.     +++.+|||++...     .....+.+.+|+.+|+.++|+||+. +++ 
T Consensus        11 ~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~-   89 (365)
T PRK09188         11 DQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA-   89 (365)
T ss_pred             cccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE-
Confidence            344556678999999999999996652     4667899987532     1223567999999999999999985 443 


Q ss_pred             EEecCeeEEEEeeCCCCChhh
Q 043709           98 CVEKGVKILIYEHMPNKSLDY  118 (253)
Q Consensus        98 ~~~~~~~~lv~e~~~~g~L~~  118 (253)
                         .+..++||||++|++|..
T Consensus        90 ---~~~~~LVmE~~~G~~L~~  107 (365)
T PRK09188         90 ---TGKDGLVRGWTEGVPLHL  107 (365)
T ss_pred             ---cCCcEEEEEccCCCCHHH
Confidence               245799999999999974

>PRK10345 hypothetical protein; Provisional

Probab=98.92  E-value=6e-09  Score=79.96  Aligned_cols=85  Identities=20%  Similarity=0.200  Sum_probs=65.0

Q ss_pred             ccccCccccccccceEeeC-CCEEEEEEecccccccHHHHHHHHHHHHhc-----cCCCcceEeEEEEecC---ee-EEE
Q 043709           38 FSMENKLGEGGFGPGKLLN-GEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-----QDINLVRIIGCCVEKG---VK-ILI  107 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~nIv~~~~~~~~~~---~~-~lv  107 (253)
                      ++-.+.||+|+||.++... ....+||++........+.+.+|+.+++.+     .||||++++|++.++.   .+ .+|
T Consensus         4 L~~~~~LG~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cCCcceecCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            3445789999999977522 222368888765444567799999999999     5799999999998763   43 478


Q ss_pred             Eee--CCCCChhhhccC
Q 043709          108 YEH--MPNKSLDYFLFD  122 (253)
Q Consensus       108 ~e~--~~~g~L~~~l~~  122 (253)
                      +||  +.+|+|.+++.+
T Consensus        84 ~e~~G~~~~tL~~~l~~  100 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQ  100 (210)
T ss_pred             ecCCCCcchhHHHHHHc
Confidence            999  558999999954

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.84  E-value=1.2e-10  Score=102.42  Aligned_cols=193  Identities=12%  Similarity=0.090  Sum_probs=111.4

Q ss_pred             cccCccccccccc----eEeeCCCEEEEEEec----cc-ccccH-HHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           39 SMENKLGEGGFGP----GKLLNGEQVAVKRLS----SQ-SGQGL-EEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        39 ~~~~~ig~G~fg~----~~~~~~~~vavK~~~----~~-~~~~~-~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .....+|.|++|.    ......+..+.|...    .. ..... ..+..|+.+-..++|||++.....+.+.....-.|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            4567899999994    222223333333332    11 11111 12566777778889999988887777666555569


Q ss_pred             eeCCCCChhhhccCCCCcCCCCcc-------------c--------------------eeee------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWG-------------T--------------------RVRI------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~-------------~--------------------~~~i------------------  137 (253)
                      |||++ ||...+.+..........             .                    .+.+                  
T Consensus       401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~  479 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH  479 (601)
T ss_pred             hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhh
Confidence            99999 998887432111000000             0                    0000                  


Q ss_pred             ---------------eeecCcccc-ccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ---------------YALHGVFSI-KSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ---------------~~~~~~~~~-~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                     .+....|.+ ..||||.|++++.|.+|+.||..............    .  ..  ..-...-..
T Consensus       480 ~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~----~--~~--~~~~~~~~~  551 (601)
T KOG0590|consen  480 ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN----Y--SD--QRNIFEGPN  551 (601)
T ss_pred             hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc----c--cc--ccccccChH
Confidence                           122333544 47999999999999999999986655433220000    0  00  000000001


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                      ......+.....++.++|+.+|.+|.++++|+  .+++++.
T Consensus       552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            11123455677888999999999999999999  4566554

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.83  E-value=2.3e-08  Score=79.56  Aligned_cols=204  Identities=15%  Similarity=0.141  Sum_probs=131.8

Q ss_pred             cCccccCccccccccc----eEeeCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      -+|.++++||+|+||.    ..+.+++.||||.-...  +....+..|.+..+.|. .++|.+.+-+-..+-.-.||+|+
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL  105 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL  105 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence            4799999999999998    55678999999976543  34457888999999984 79999999888888888999998


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      .. -+|+++..--...  .+..+.+.+                                                     
T Consensus       106 LG-PSLEDLFD~CgR~--FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp  182 (449)
T KOG1165|consen  106 LG-PSLEDLFDLCGRR--FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP  182 (449)
T ss_pred             hC-cCHHHHHHHhcCc--ccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence            85 4776654100000  000000000                                                     


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                              ...+..-+..-|+=|+|-+++..+.|..||.+.........-..+........+. 
T Consensus       183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~-  261 (449)
T KOG1165|consen  183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIE-  261 (449)
T ss_pred             cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHH-
Confidence                                    1233345567899999999999999999999776543211111101111111111 


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                          .++..++    .++...+.-.-..+-++-|+.+-+..++.+.++.+....-=.|+|
T Consensus       262 ----~Lc~g~P----~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW  313 (449)
T KOG1165|consen  262 ----VLCEGFP----EEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDW  313 (449)
T ss_pred             ----HHHhcCH----HHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccc
Confidence                1222222    233333222334477789999999999999988877776666665

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.71  E-value=3.7e-09  Score=97.11  Aligned_cols=79  Identities=18%  Similarity=0.263  Sum_probs=50.4

Q ss_pred             eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhcc
Q 043709          138 YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLF  217 (253)
Q Consensus       138 ~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  217 (253)
                      .+....|+.++|||||||+||||+++..|+....    ......    . ..    ...+..     .........++.+
T Consensus       186 ~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~~~----~-~~----~~~~~~-----~~~~~~~~~~~~~  247 (793)
T PLN00181        186 EDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMSSL----R-HR----VLPPQI-----LLNWPKEASFCLW  247 (793)
T ss_pred             hhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHHHH----H-Hh----hcChhh-----hhcCHHHHHHHHH
Confidence            3456678999999999999999999877643111    011000    0 00    000100     1112345577788


Q ss_pred             ccCCCCCCCCCHHHHHH
Q 043709          218 CFRENATDRPTMLEIVS  234 (253)
Q Consensus       218 cl~~~p~~RPs~~~il~  234 (253)
                      ||..+|.+||++.++++
T Consensus       248 ~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        248 LLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             hCCCChhhCcChHHHhh
Confidence            99999999999999985

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.61  E-value=3.6e-09  Score=95.58  Aligned_cols=83  Identities=19%  Similarity=0.139  Sum_probs=59.4

Q ss_pred             CccccCccccccccc--eEeeCCCEEEEEEecccc-cccHHHHHHHHHH--HHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           37 NFSMENKLGEGGFGP--GKLLNGEQVAVKRLSSQS-GQGLEEFKNEMML--IAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~--~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      ++...+.+|++.|=+  ..+..+..|+||++-+.. .-....+.+++.-  ....+|||.+.+.-+-......|||-+|.
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv  103 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV  103 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence            677789999999988  444555569999997553 3334444444333  34458999999987777777788888888


Q ss_pred             CCCChhhhc
Q 043709          112 PNKSLDYFL  120 (253)
Q Consensus       112 ~~g~L~~~l  120 (253)
                      .+ +|.+.+
T Consensus       104 kh-nLyDRl  111 (1431)
T KOG1240|consen  104 KH-NLYDRL  111 (1431)
T ss_pred             hh-hhhhhh
Confidence            75 787766

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.60  E-value=1e-06  Score=71.73  Aligned_cols=191  Identities=23%  Similarity=0.260  Sum_probs=120.8

Q ss_pred             ccccCccccccccceEee-CCCEEEEEEecccccc---cHHHHHHHHHHHHhccCC-CcceEeEEEEecCeeEEEEeeCC
Q 043709           38 FSMENKLGEGGFGPGKLL-NGEQVAVKRLSSQSGQ---GLEEFKNEMMLIAKLQDI-NLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      |.+.+.||.|+||.++.. ....+++|.+......   ....+.+|+.++..+.|+ +|+.+.+.+......+++++|+.
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~   81 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVD   81 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCC
Confidence            667789999999775542 2368999999765322   467899999999999887 79999999977777899999999


Q ss_pred             CCChhhhccCCCC--cCC----------------------------------CCccc-eeee------------------
Q 043709          113 NKSLDYFLFDPAN--KGR----------------------------------LGWGT-RVRI------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~--~~~----------------------------------~~~~~-~~~i------------------  137 (253)
                      ++++.+++.....  ...                                  +.... ...+                  
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (384)
T COG0515          82 GGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI  161 (384)
T ss_pred             CCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccc
Confidence            9999866643210  000                                  00000 0000                  


Q ss_pred             -----------------eeec---CccccccceeehhHHHHHHHhCCCCcCcCCCC--CcchhhhhhHhhhcCCCccccc
Q 043709          138 -----------------YALH---GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN--SLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 -----------------~~~~---~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                       ....   ..++...|+||+|+++++++++..|+......  .......+ ....  ..   ..
T Consensus       162 ~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~--~~---~~  235 (384)
T COG0515         162 PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKII-LELP--TP---SL  235 (384)
T ss_pred             cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHH-HhcC--Cc---cc
Confidence                             1111   45677899999999999999999995544321  11111111 1110  00   00


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...............+.+++..|+..+|..|.+..+...
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~  274 (384)
T COG0515         236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS  274 (384)
T ss_pred             ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence            000111100223345667778899999999999887665

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.47  E-value=5.5e-08  Score=83.23  Aligned_cols=77  Identities=25%  Similarity=0.266  Sum_probs=61.0

Q ss_pred             cccccccceEe-------eCCCEEEEEEecccc--cccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           44 LGEGGFGPGKL-------LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        44 ig~G~fg~~~~-------~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +|+|+||++.+       ..+..+|.|.+++..  .........|-.++..++ ||.+|+++-.+..+..++++++|..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            68999998332       567889999987652  111225666778888886 99999999999999999999999999


Q ss_pred             CChhhhc
Q 043709          114 KSLDYFL  120 (253)
Q Consensus       114 g~L~~~l  120 (253)
                      |+|...+
T Consensus        82 g~lft~l   88 (612)
T KOG0603|consen   82 GDLFTRL   88 (612)
T ss_pred             chhhhcc
Confidence            9997766

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.43  E-value=5.3e-07  Score=68.37  Aligned_cols=77  Identities=14%  Similarity=0.075  Sum_probs=53.1

Q ss_pred             cCccccccccceEe---eCCCEEEEEEeccccc--cc-------H-----------------HHHHHHHHHHHhccCCCc
Q 043709           41 ENKLGEGGFGPGKL---LNGEQVAVKRLSSQSG--QG-------L-----------------EEFKNEMMLIAKLQDINL   91 (253)
Q Consensus        41 ~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~--~~-------~-----------------~~~~~E~~~l~~l~H~nI   91 (253)
                      ...||+|+||.++.   .+|+.||||+++....  ..       .                 .....|+.++..+.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            46899999999554   4689999999975421  11       1                 122459999999988877


Q ss_pred             ceEeEEEEecCeeEEEEeeCCCCChhhh
Q 043709           92 VRIIGCCVEKGVKILIYEHMPNKSLDYF  119 (253)
Q Consensus        92 v~~~~~~~~~~~~~lv~e~~~~g~L~~~  119 (253)
                      .........  ..+|||||++++++...
T Consensus        82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~  107 (190)
T cd05147          82 PCPEPILLK--SHVLVMEFIGDDGWAAP  107 (190)
T ss_pred             CCCcEEEec--CCEEEEEEeCCCCCcch
Confidence            544433222  23899999998776654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.42  E-value=1.1e-06  Score=67.78  Aligned_cols=80  Identities=13%  Similarity=0.101  Sum_probs=64.5

Q ss_pred             CccccccccceEe--eCCCEEEEEEeccccc--c------cHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           42 NKLGEGGFGPGKL--LNGEQVAVKRLSSQSG--Q------GLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        42 ~~ig~G~fg~~~~--~~~~~vavK~~~~~~~--~------~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      +.||+|++|.++.  ..+..+++|.......  .      ....+.+|+.++..+.|+||.....++...+..+++|||+
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   81 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI   81 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence            6789999999665  4788899998764321  1      1245788999999999999988888877778889999999


Q ss_pred             CCCChhhhcc
Q 043709          112 PNKSLDYFLF  121 (253)
Q Consensus       112 ~~g~L~~~l~  121 (253)
                      +|++|.+++.
T Consensus        82 ~G~~L~~~~~   91 (211)
T PRK14879         82 EGEPLKDLIN   91 (211)
T ss_pred             CCcCHHHHHH
Confidence            9999999884

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.34  E-value=3.2e-07  Score=70.11  Aligned_cols=204  Identities=18%  Similarity=0.162  Sum_probs=124.2

Q ss_pred             HHHHHHHhcCccccCccccccccc----eEeeCCCEEEEEEecccccccHHHHHHHHHHHHhccC-CCcceEeEEEEecC
Q 043709           28 LASISAATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQD-INLVRIIGCCVEKG  102 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~ig~G~fg~----~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~~~~~~~~~~  102 (253)
                      ..++.+ .+.|.+++.||.|+||.    .+...|+.||||.-+..  ..-..+..|..+.+.|+| ..|..+..+....+
T Consensus         8 ~~~~iv-~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~   84 (341)
T KOG1163|consen    8 LEELIV-GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKD   84 (341)
T ss_pred             hhhhee-ccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccc
Confidence            334433 35799999999999999    44478999999987643  222457889999999975 67777888888888


Q ss_pred             eeEEEEeeCCCCChhhhcc--------------------------------CCCCcCC----CCccc-ee-ee-------
Q 043709          103 VKILIYEHMPNKSLDYFLF--------------------------------DPANKGR----LGWGT-RV-RI-------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~--------------------------------~~~~~~~----~~~~~-~~-~i-------  137 (253)
                      .-.+||++.. -+|+++..                                +.-+...    +.... .+ -|       
T Consensus        85 ynvlVMdLLG-PsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk  163 (341)
T KOG1163|consen   85 YNVLVMDLLG-PSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK  163 (341)
T ss_pred             cceeeeeccC-ccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence            8899999874 57777651                                0000000    00000 00 00       


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~  189 (253)
                                                  +..+..-+..-|+=|+|-+|.....|..||++............+.....  
T Consensus       164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~--  241 (341)
T KOG1163|consen  164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKM--  241 (341)
T ss_pred             hccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhc--
Confidence                                        11112234567999999999999999999987765432211111011111  


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                         ...-..++..++    .++...+.-|-..--++-|+..-+.+.+.-+.+++.
T Consensus       242 ---s~~ie~LC~G~P----~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln  289 (341)
T KOG1163|consen  242 ---STPIEVLCKGFP----AEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLN  289 (341)
T ss_pred             ---CCCHHHHhCCCc----HHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcc
Confidence               111122333333    334444444766677788888777777766665554

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.33  E-value=2e-06  Score=65.57  Aligned_cols=80  Identities=18%  Similarity=0.179  Sum_probs=61.0

Q ss_pred             ccccccccceEe--eCCCEEEEEEecccc--c------ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           43 KLGEGGFGPGKL--LNGEQVAVKRLSSQS--G------QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        43 ~ig~G~fg~~~~--~~~~~vavK~~~~~~--~------~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .||+|+||.++.  ..+..+++|......  .      ....++.+|+.++..++|+++.....++...+..+++|||++
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            479999999555  567889999865321  1      113567889999999998877666666666677899999999


Q ss_pred             CCChhhhccC
Q 043709          113 NKSLDYFLFD  122 (253)
Q Consensus       113 ~g~L~~~l~~  122 (253)
                      |++|.+++..
T Consensus        81 g~~l~~~~~~   90 (199)
T TIGR03724        81 GKPLKDVIEE   90 (199)
T ss_pred             CccHHHHHhh
Confidence            9999988743

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.30  E-value=6.8e-07  Score=81.57  Aligned_cols=183  Identities=15%  Similarity=0.205  Sum_probs=112.3

Q ss_pred             HHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhcc---CCCcceEeEEEEecCe
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ---DINLVRIIGCCVEKGV  103 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~~~~~~~~~~~  103 (253)
                      ++..-...|.+.+.||+|+||++++   ..++.||+|+-+....-+.   .--.+++.+|+   -+-|..+..++.-.+.
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEf---YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~  768 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEF---YICLQVMERLKPQMLPSIMHISSAHVFQNA  768 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceee---eehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence            4445556799999999999999766   3489999998876433221   11111122222   2334444444455566


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      -.+|+||.+.|+|-++++.   .+..++...+.+                                              
T Consensus       769 S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  769 SVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             ceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence            7899999999999999952   222333322222                                              


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~  189 (253)
                                                  ...+..+++.+|.|.++-+++.|+.|+-.                .  ...+
T Consensus       846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~----------------q--~~~g  907 (974)
T KOG1166|consen  846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM----------------E--VKNG  907 (974)
T ss_pred             ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH----------------H--hcCC
Confidence                                        33456789999999999999999998732                1  1122


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ...... ..++--...+++..+.++   .|..|-..=|...++...|++.+
T Consensus       908 ~~~~~~-~~~~Ry~~~~~W~~~F~~---lLN~~~~~~p~l~~lr~~~~~~~  954 (974)
T KOG1166|consen  908 SSWMVK-TNFPRYWKRDMWNKFFDL---LLNPDCDTLPNLQELRTELEEVL  954 (974)
T ss_pred             cceecc-ccchhhhhHHHHHHHHHH---HhCcCcccchhHHHHHHHHHHHH
Confidence            222222 223333345566666666   45433333378888888888765

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.29  E-value=2.4e-07  Score=75.65  Aligned_cols=78  Identities=12%  Similarity=0.083  Sum_probs=48.8

Q ss_pred             cccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCC
Q 043709          146 IKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATD  225 (253)
Q Consensus       146 ~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  225 (253)
                      .|+|.|+.|.+.||++....||.....--.+...      .....+         +..+..++..+..++...++.||++
T Consensus       436 ~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~------Yqe~qL---------Palp~~vpp~~rqlV~~lL~r~psk  500 (598)
T KOG4158|consen  436 EKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT------YQESQL---------PALPSRVPPVARQLVFDLLKRDPSK  500 (598)
T ss_pred             chhhhhhhhhhHHHHhccCCcccccchheechhh------hhhhhC---------CCCcccCChHHHHHHHHHhcCCccc
Confidence            4799999999999999999998753221111100      111111         1222233445566666689999999


Q ss_pred             CCCHHHHHHHHhh
Q 043709          226 RPTMLEIVSMLSN  238 (253)
Q Consensus       226 RPs~~~il~~L~~  238 (253)
                      |+|..-..+.|+-
T Consensus       501 Rvsp~iAANvl~L  513 (598)
T KOG4158|consen  501 RVSPNIAANVLNL  513 (598)
T ss_pred             cCCccHHHhHHHH
Confidence            9997665555543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.29  E-value=4.4e-06  Score=63.39  Aligned_cols=76  Identities=14%  Similarity=0.127  Sum_probs=54.6

Q ss_pred             cCccccccccceEe---eCCCEEEEEEecccccc--c------------------------HHHHHHHHHHHHhccCCCc
Q 043709           41 ENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQ--G------------------------LEEFKNEMMLIAKLQDINL   91 (253)
Q Consensus        41 ~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~H~nI   91 (253)
                      ...||+|++|.+++   .+|+.||||+++.....  .                        ...+..|...+..+.|++|
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            46899999999654   36899999999754211  0                        1234678999999999988


Q ss_pred             ceEeEEEEecCeeEEEEeeCCCCChhh
Q 043709           92 VRIIGCCVEKGVKILIYEHMPNKSLDY  118 (253)
Q Consensus        92 v~~~~~~~~~~~~~lv~e~~~~g~L~~  118 (253)
                      .....+....  .++||||++++++..
T Consensus        82 ~~p~~~~~~~--~~lVmE~~~g~~~~~  106 (190)
T cd05145          82 PVPEPILLKK--NVLVMEFIGDDGSPA  106 (190)
T ss_pred             CCceEEEecC--CEEEEEEecCCCchh
Confidence            6555544433  489999999875543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.24  E-value=4.4e-06  Score=73.57  Aligned_cols=86  Identities=16%  Similarity=0.140  Sum_probs=65.3

Q ss_pred             cCccccCccccccccceEe--eCCCEEEEEEeccc--c------cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQ--S------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~--~------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..|...+.||+|+||.+++  ..+..+++|+....  .      ....+++.+|+.+++.++|++++....++...+..+
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             cccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            3456678999999999776  34455555543221  1      112356889999999999999999888887777889


Q ss_pred             EEEeeCCCCChhhhcc
Q 043709          106 LIYEHMPNKSLDYFLF  121 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~  121 (253)
                      ++|||+++++|.+++.
T Consensus       413 lv~E~~~g~~L~~~l~  428 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE  428 (535)
T ss_pred             EEEEecCCCcHHHHHH
Confidence            9999999999999873

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.23  E-value=1.5e-07  Score=79.12  Aligned_cols=25  Identities=28%  Similarity=0.437  Sum_probs=22.2

Q ss_pred             eeecCccccccceeehhHHHHHHHh
Q 043709          138 YALHGVFSIKSDVFSFGVLLLETLS  162 (253)
Q Consensus       138 ~~~~~~~~~~~DiwSlG~~l~ell~  162 (253)
                      .+.+..|+.++||||||++++|+++
T Consensus       433 Qi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  433 QIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             HHhhhhhhhhcchhhHHHHHHHHHH
Confidence            3456779999999999999999998

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.07  E-value=1.1e-06  Score=77.81  Aligned_cols=186  Identities=16%  Similarity=0.168  Sum_probs=120.2

Q ss_pred             HhcCccccCccccccccceEe-----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL-----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~-----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~  105 (253)
                      ....|.+.+.||+|+|+.+.+     .....+|+|.+....  ....+....|..+-+.+. |+|++.+++...+.+..+
T Consensus        18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence            455788888999999998333     344567777776442  333344556888888886 999999999999999999


Q ss_pred             EEEeeCCCCChhhhc-cCCC-Cc-------------CCCCccc-eeee--------------------------------
Q 043709          106 LIYEHMPNKSLDYFL-FDPA-NK-------------GRLGWGT-RVRI--------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l-~~~~-~~-------------~~~~~~~-~~~i--------------------------------  137 (253)
                      ++++|..+|++...+ .... ..             ..+.+.. ...+                                
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence            999999999998887 2211 00             0011111 0000                                


Q ss_pred             ----------ee-------------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccc
Q 043709          138 ----------YA-------------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDL  194 (253)
Q Consensus       138 ----------~~-------------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (253)
                                ..             ......+..|+||.|+++.-+++|..||............+              
T Consensus       178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~--------------  243 (601)
T KOG0590|consen  178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSW--------------  243 (601)
T ss_pred             cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceee--------------
Confidence                      00             00123567899999999999999999987555433221111              


Q ss_pred             cccc--CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 043709          195 MDPM--LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       195 ~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      ....  ..............++..+++..+|+.|.+.+++-
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  244 KSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             cccccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence            1111  11122223345567777778889999999988865

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.00  E-value=2e-06  Score=68.75  Aligned_cols=44  Identities=30%  Similarity=0.267  Sum_probs=35.7

Q ss_pred             HHHHhccCCCcceEeEEEEec-----CeeEEEEeeCCCCChhhhccCCC
Q 043709           81 MLIAKLQDINLVRIIGCCVEK-----GVKILIYEHMPNKSLDYFLFDPA  124 (253)
Q Consensus        81 ~~l~~l~H~nIv~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~  124 (253)
                      .-+-++.|.|||+++.++.+.     ....++.||+..|++.++|++.+
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~  167 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTK  167 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHH
Confidence            345566799999999998754     35899999999999999996544

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.99  E-value=2.8e-05  Score=56.00  Aligned_cols=78  Identities=17%  Similarity=0.175  Sum_probs=62.7

Q ss_pred             ccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccC--CCcceEeEEEEecCeeEEEEeeCCCCC
Q 043709           40 MENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQD--INLVRIIGCCVEKGVKILIYEHMPNKS  115 (253)
Q Consensus        40 ~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~~~~~~~~~~~~~lv~e~~~~g~  115 (253)
                      +.+.||+|.++.++.  ..+..+++|.......  ...+..|+.++..++|  .++.++++.....+..+++|||+.++.
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~   79 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET   79 (155)
T ss_pred             cceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence            457899999999544  3457899999875433  5678999999999976  599999998888788999999999877


Q ss_pred             hhhh
Q 043709          116 LDYF  119 (253)
Q Consensus       116 L~~~  119 (253)
                      +..+
T Consensus        80 ~~~~   83 (155)
T cd05120          80 LDEV   83 (155)
T ss_pred             cccC
Confidence            7643

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.90  E-value=1.5e-05  Score=67.82  Aligned_cols=152  Identities=18%  Similarity=0.121  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHhccCCCcceEeEEEEec-CeeEEEEeeCCCCChhhhccCCCCcCCCCcccee----ee--------eee
Q 043709           74 EEFKNEMMLIAKLQDINLVRIIGCCVEK-GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRV----RI--------YAL  140 (253)
Q Consensus        74 ~~~~~E~~~l~~l~H~nIv~~~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~----~i--------~~~  140 (253)
                      ..++....+++.+.|+|..+++.+.... ....+|||++.. +|++++..+. ....+.....    .+        ...
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~-Sled~~~~~~-l~~~s~~~~~~~~~~~~~~td~~~t~~  104 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTM-SLEDILKTGN-LKDESLLAHGVLHLNIIYITDHFLTKY  104 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhcc-chHHHHHhcc-cchhhhcccccceehhhhccccccccC
Confidence            4567778889999999999999988654 458999999974 8999885533 2111111000    00        001


Q ss_pred             cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccC
Q 043709          141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFR  220 (253)
Q Consensus       141 ~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  220 (253)
                      ....++|+||||+|.++.|+..|..-+.....  .+.......-...+.+........   .....+....+.+..+|+-
T Consensus       105 ~~~~~pKsdVwsl~~i~~el~L~~~l~~~~~~--s~~l~~i~k~~~~d~~~~~~a~e~---~~~~~~d~~~~~~~~~c~~  179 (725)
T KOG1093|consen  105 PSPIGPKSDVWSLGFIILELYLGISLEAELTE--SEYLEILLKYYTDDQELLSTAMEH---LIQLLADKKRLPLLKKCLW  179 (725)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHhhHHHHHHHH--HHHHHHHHHhccCchhHHHHHHHH---HHHHhhhHhHHHHhccCCc
Confidence            12234799999999999999988755432111  111111101111111111111111   3334556678889999999


Q ss_pred             CCCCCCCCHHHH
Q 043709          221 ENATDRPTMLEI  232 (253)
Q Consensus       221 ~~p~~RPs~~~i  232 (253)
                      ..|..||...+.
T Consensus       180 ~~~~ir~l~~~~  191 (725)
T KOG1093|consen  180 LEPIIRPLPMEL  191 (725)
T ss_pred             cccccccchhHH
Confidence            999999865553

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.84  E-value=8.6e-05  Score=56.65  Aligned_cols=87  Identities=16%  Similarity=0.094  Sum_probs=60.1

Q ss_pred             HHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccc----------------------cHHHHHHHHHHHH
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQ----------------------GLEEFKNEMMLIA   84 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~   84 (253)
                      .+......|.+.+.||+|+||.++.   .+++.||||++......                      .......|..++.
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   88 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK   88 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence            3333333488889999999999553   46899999987643200                      1123677889999


Q ss_pred             hccCCC--cceEeEEEEecCeeEEEEeeCCCCChhhhc
Q 043709           85 KLQDIN--LVRIIGCCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        85 ~l~H~n--Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      .+.|++  +...++    ....+++|||+++++|....
T Consensus        89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcc
Confidence            998774  444443    24458999999999887654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>smart00090 RIO RIO-like kinase

Probab=97.83  E-value=6.5e-05  Score=59.02  Aligned_cols=80  Identities=14%  Similarity=0.034  Sum_probs=57.2

Q ss_pred             CccccCccccccccceE-----eeCCCEEEEEEecccccc------------------------cHHHHHHHHHHHHhcc
Q 043709           37 NFSMENKLGEGGFGPGK-----LLNGEQVAVKRLSSQSGQ------------------------GLEEFKNEMMLIAKLQ   87 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~-----~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~   87 (253)
                      .|++.+.||+|++|.++     ..+|+.||+|+++.....                        ....+..|+.++..+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            58899999999999943     356899999999753210                        0123568999999997


Q ss_pred             CC--CcceEeEEEEecCeeEEEEeeCCCCChhhhc
Q 043709           88 DI--NLVRIIGCCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        88 H~--nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      +.  .+.++++.    ...++||||+++++|....
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~  139 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPR  139 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccc
Confidence            53  34444442    2348999999998887654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.75  E-value=0.00014  Score=55.59  Aligned_cols=78  Identities=13%  Similarity=0.078  Sum_probs=57.9

Q ss_pred             cccCccccccccceEee--CCCEEEEEEeccccc----ccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEeeC
Q 043709           39 SMENKLGEGGFGPGKLL--NGEQVAVKRLSSQSG----QGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        39 ~~~~~ig~G~fg~~~~~--~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      -....|++|+||++.+.  .+..++.+.+.....    -....+.+|+++|+++. |++|.+++++    +..+++|+|+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI   80 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL   80 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence            35578999999997663  466777776764422    11235889999999995 6889999886    3469999999


Q ss_pred             CCCChhhhc
Q 043709          112 PNKSLDYFL  120 (253)
Q Consensus       112 ~~g~L~~~l  120 (253)
                      .|.+|...+
T Consensus        81 ~G~~L~~~~   89 (218)
T PRK12274         81 AGAAMYQRP   89 (218)
T ss_pred             cCccHHhhh
Confidence            998886544

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.70  E-value=9.3e-06  Score=73.92  Aligned_cols=76  Identities=18%  Similarity=0.160  Sum_probs=52.5

Q ss_pred             eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhcc
Q 043709          138 YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLF  217 (253)
Q Consensus       138 ~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  217 (253)
                      ++....|+..+|-|++|+++||.+-|+-||+...+.  ++...+            +-+.....+.....+.++..++.+
T Consensus       229 VilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe--elfg~v------------isd~i~wpE~dea~p~Ea~dli~~  294 (1205)
T KOG0606|consen  229 VILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--ELFGQV------------ISDDIEWPEEDEALPPEAQDLIEQ  294 (1205)
T ss_pred             hhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH--HHHhhh------------hhhhccccccCcCCCHHHHHHHHH
Confidence            556677999999999999999999999998755332  122111            001112233344555677888888


Q ss_pred             ccCCCCCCCC
Q 043709          218 CFRENATDRP  227 (253)
Q Consensus       218 cl~~~p~~RP  227 (253)
                      .|+.+|-+|-
T Consensus       295 LL~qnp~~Rl  304 (1205)
T KOG0606|consen  295 LLRQNPLCRL  304 (1205)
T ss_pred             HHHhChHhhc
Confidence            9999999994

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.60  E-value=4e-05  Score=61.35  Aligned_cols=63  Identities=10%  Similarity=0.104  Sum_probs=41.5

Q ss_pred             ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCC
Q 043709          143 VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFREN  222 (253)
Q Consensus       143 ~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~  222 (253)
                      .++.+.|.|++|+++|.|.++..||........                    .+..-..+. +++..+..|+..+|+.|
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~--------------------~~~~f~~C~-~~Pe~v~~LI~~lL~~~  284 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLSSPEAD--------------------PEWDFSRCR-DMPEPVQFLIRGLLQRN  284 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCCGGGST--------------------SGGGGTTSS----HHHHHHHHHHT-SS
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCCCcccc--------------------ccccchhcC-CcCHHHHHHHHHHccCC
Confidence            477889999999999999999999864432111                    000112334 77788888999999999


Q ss_pred             CCCC
Q 043709          223 ATDR  226 (253)
Q Consensus       223 p~~R  226 (253)
                      |.+|
T Consensus       285 ~~~R  288 (288)
T PF14531_consen  285 PEDR  288 (288)
T ss_dssp             GGGS
T ss_pred             cccC
Confidence            9987

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.50  E-value=5.9e-05  Score=64.73  Aligned_cols=180  Identities=19%  Similarity=0.203  Sum_probs=113.5

Q ss_pred             CccccCcccc--ccccceE------eeCCCEEEEEEec--ccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeE
Q 043709           37 NFSMENKLGE--GGFGPGK------LLNGEQVAVKRLS--SQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        37 ~~~~~~~ig~--G~fg~~~------~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~  105 (253)
                      .+.+.+.+|.  |.+|.++      ..++..+|+|.-.  ...+.....-.+|+...+.+ .|+|.++.+..+..++..+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            4566788999  9999833      4567889998843  22334445567788888888 5999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCC--------CCccc----------eeee------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGR--------LGWGT----------RVRI------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~--------~~~~~----------~~~i------------------------------  137 (253)
                      +-.|+|. .+|..+.+......+        ..|..          ...+                              
T Consensus       195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i  273 (524)
T KOG0601|consen  195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI  273 (524)
T ss_pred             eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEc
Confidence            9999997 577666632111000        00000          0000                              


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                              ....+.++...|++|+|.++.+..++-..+......                 .+.
T Consensus       274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-----------------~W~  336 (524)
T KOG0601|consen  274 SDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNS-----------------SWS  336 (524)
T ss_pred             cCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCC-----------------Ccc
Confidence                                    223445778999999999999999886654322111                 111


Q ss_pred             ccccc-CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          194 LMDPM-LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       194 ~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..++. +..++......++...+..+++.+|..|++++.+.+
T Consensus       337 ~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  337 QLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            11111 112222222334444666799999999999888765

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=97.37  E-value=0.00055  Score=59.98  Aligned_cols=66  Identities=21%  Similarity=0.283  Sum_probs=53.7

Q ss_pred             EeeCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCChhhhc
Q 043709           53 KLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        53 ~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      .+.++.+|.|+..+.......+...+.+..|+.++||||++++..+..++..|+|+|-+.  .|..++
T Consensus        33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~l   98 (690)
T KOG1243|consen   33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVL   98 (690)
T ss_pred             eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHH
Confidence            346788899998876654445667888899999999999999999999999999999774  555554

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.07  E-value=0.002  Score=48.40  Aligned_cols=73  Identities=19%  Similarity=0.238  Sum_probs=46.6

Q ss_pred             cCccccccccceEe---eCCCEEEEEEecccccc--cHHH----------------------HHHHHHHHHhccCC--Cc
Q 043709           41 ENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQ--GLEE----------------------FKNEMMLIAKLQDI--NL   91 (253)
Q Consensus        41 ~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~H~--nI   91 (253)
                      .+.||+|+||.++.   .+++.||||+++.....  ....                      ...|...+..+.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            46899999999544   46889999998753211  1111                      13566666666543  34


Q ss_pred             ceEeEEEEecCeeEEEEeeCCCCChh
Q 043709           92 VRIIGCCVEKGVKILIYEHMPNKSLD  117 (253)
Q Consensus        92 v~~~~~~~~~~~~~lv~e~~~~g~L~  117 (253)
                      .+.++.    ...+++|||++++++.
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~  103 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIP  103 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCcc
Confidence            444443    2458999999986643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.05  E-value=0.00042  Score=60.59  Aligned_cols=32  Identities=25%  Similarity=0.473  Sum_probs=25.1

Q ss_pred             cCccccCccccccccceEe---eC-CCEEEEEEeccc
Q 043709           36 DNFSMENKLGEGGFGPGKL---LN-GEQVAVKRLSSQ   68 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~-~~~vavK~~~~~   68 (253)
                      ..|+. +.||+|++|.++.   .+ |+.||||+++..
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~  155 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPD  155 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence            45666 7899999999554   34 999999999743

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=96.82  E-value=0.0064  Score=47.87  Aligned_cols=94  Identities=18%  Similarity=0.170  Sum_probs=59.5

Q ss_pred             cccHHHHHHHhcCccccCccccccccceEeeCCCEEEEEEecccc-------------cccHHHHHHHHHHHHhccCCCc
Q 043709           25 FFSLASISAATDNFSMENKLGEGGFGPGKLLNGEQVAVKRLSSQS-------------GQGLEEFKNEMMLIAKLQDINL   91 (253)
Q Consensus        25 ~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~nI   91 (253)
                      .|+.+.+..  .++.+++..|+|+...+.. .+..++||.+....             .....++.+|+.++..+.|++|
T Consensus        26 ~~~~~~~~~--~~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi  102 (239)
T PRK01723         26 LFDPDFWQQ--QARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGL  102 (239)
T ss_pred             hcCHHHHhh--cCceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCC
Confidence            345544443  2344444445554444443 47789999885311             1233568899999999998775


Q ss_pred             --ceEeEEEEec-C---eeEEEEeeCCC-CChhhhcc
Q 043709           92 --VRIIGCCVEK-G---VKILIYEHMPN-KSLDYFLF  121 (253)
Q Consensus        92 --v~~~~~~~~~-~---~~~lv~e~~~~-g~L~~~l~  121 (253)
                        ...+++.... .   ..++|||++++ .+|.+++.
T Consensus       103 ~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~  139 (239)
T PRK01723        103 PVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQ  139 (239)
T ss_pred             CCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHh
Confidence              6677665432 2   23599999997 68988884

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.78  E-value=0.0024  Score=54.83  Aligned_cols=80  Identities=16%  Similarity=0.178  Sum_probs=50.5

Q ss_pred             CccccccccceEe---eCCCEEEEEEecccccccH----------------------------------------HHHHH
Q 043709           42 NKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGL----------------------------------------EEFKN   78 (253)
Q Consensus        42 ~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~   78 (253)
                      +.||.|++|.++.   .+|+.||||+.+..-....                                        -.|.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            5799999999554   6799999999865311000                                        02445


Q ss_pred             HHHHHHhc----cCCCcceEeEEE-EecCeeEEEEeeCCCCChhhhcc
Q 043709           79 EMMLIAKL----QDINLVRIIGCC-VEKGVKILIYEHMPNKSLDYFLF  121 (253)
Q Consensus        79 E~~~l~~l----~H~nIv~~~~~~-~~~~~~~lv~e~~~~g~L~~~l~  121 (253)
                      |...+..+    +|.+-+.+-.++ ......+++|||++|++|.++..
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~  250 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAA  250 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHH
Confidence            55555554    233333333333 22345689999999999988763

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.60  E-value=0.0016  Score=56.16  Aligned_cols=98  Identities=16%  Similarity=0.052  Sum_probs=71.4

Q ss_pred             cccccHHH-HHHHhcCccccCccccccccceEe-----eCCCEEEEEEeccccccc--HHHHHHHHHHHHhc-cCCCcce
Q 043709           23 IPFFSLAS-ISAATDNFSMENKLGEGGFGPGKL-----LNGEQVAVKRLSSQSGQG--LEEFKNEMMLIAKL-QDINLVR   93 (253)
Q Consensus        23 ~~~~~~~~-l~~~~~~~~~~~~ig~G~fg~~~~-----~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l-~H~nIv~   93 (253)
                      ...|.-.+ ......+|..+..||.|.|+.+..     ..+..|++|.+.......  ...-+.|+.+...+ .|.+++.
T Consensus       251 ~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g  330 (524)
T KOG0601|consen  251 ANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVG  330 (524)
T ss_pred             hheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCC
Confidence            34455555 334556899999999999998444     567789999887653222  23345677777776 6999999


Q ss_pred             EeEEEEecCeeEEEEeeCCCCChhhhc
Q 043709           94 IIGCCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        94 ~~~~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      ++..|......++-.|||.++++...+
T Consensus       331 ~~~~W~~~r~~~ip~e~~~~~s~~l~~  357 (524)
T KOG0601|consen  331 KNSSWSQLRQGYIPLEFCEGGSSSLRS  357 (524)
T ss_pred             CCCCccccccccCchhhhcCcchhhhh
Confidence            998888878888999999998886544

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.59  E-value=0.0057  Score=47.14  Aligned_cols=79  Identities=15%  Similarity=0.291  Sum_probs=57.9

Q ss_pred             CccccccccceEe---eCCCEEEEEEeccccc-ccHHHHHHHHHHHHhccC--CCcceEeEEEEec---CeeEEEEeeCC
Q 043709           42 NKLGEGGFGPGKL---LNGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQD--INLVRIIGCCVEK---GVKILIYEHMP  112 (253)
Q Consensus        42 ~~ig~G~fg~~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H--~nIv~~~~~~~~~---~~~~lv~e~~~  112 (253)
                      +.++.|..+.+++   ..|+.+++|....... .....+.+|..+++.+.+  .++.+++.+....   +..+++|||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            5688888888444   2347899998865422 235678999999999865  4567777777654   36789999999


Q ss_pred             CCChhhhc
Q 043709          113 NKSLDYFL  120 (253)
Q Consensus       113 ~g~L~~~l  120 (253)
                      |+++...+
T Consensus        84 G~~l~~~~   91 (223)
T cd05154          84 GRVLRDRL   91 (223)
T ss_pred             CEecCCCC
Confidence            98887766

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=95.94  E-value=0.0014  Score=60.42  Aligned_cols=90  Identities=12%  Similarity=0.092  Sum_probs=54.6

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ....++.+.+-+.+|+++....    .++...++|.....   .....+....+-.++-.-+||-+++.+.-+......+
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            3445677778888888887332    23433444443322   1111222333443333345677777776666678899


Q ss_pred             EEEeeCCCCChhhhccC
Q 043709          106 LIYEHMPNKSLDYFLFD  122 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~  122 (253)
                      ++++|..+++|...++.
T Consensus       881 L~~~~~~~~~~~Skl~~  897 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHN  897 (1205)
T ss_pred             hhhHHhccCCchhhhhc
Confidence            99999999999888743

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.84  E-value=0.032  Score=41.02  Aligned_cols=75  Identities=13%  Similarity=0.021  Sum_probs=51.1

Q ss_pred             cCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCc-ceEeEEEEecCeeEEEEeeCCCCChh
Q 043709           41 ENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL-VRIIGCCVEKGVKILIYEHMPNKSLD  117 (253)
Q Consensus        41 ~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~~~~~~~~~~~~~lv~e~~~~g~L~  117 (253)
                      ++.++.|.++.++.  ..+..+++|....... ....+..|+.+++.+.+.++ .+++....  ...++||||+++.++.
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~   79 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELL   79 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccc
Confidence            35678888887554  4578899998865422 22346789999999865454 44554432  3458999999998775


Q ss_pred             h
Q 043709          118 Y  118 (253)
Q Consensus       118 ~  118 (253)
                      .
T Consensus        80 ~   80 (170)
T cd05151          80 T   80 (170)
T ss_pred             c
Confidence            4

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=95.70  E-value=0.017  Score=49.76  Aligned_cols=67  Identities=21%  Similarity=0.288  Sum_probs=50.8

Q ss_pred             eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEE----ecCeeEEEEeeCCC-CChhhhcc
Q 043709           55 LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCV----EKGVKILIYEHMPN-KSLDYFLF  121 (253)
Q Consensus        55 ~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~----~~~~~~lv~e~~~~-g~L~~~l~  121 (253)
                      .+|..|.+|++.............-++.++++.|+|||.+..++.    .+..+.+|++|.++ ++|.++-.
T Consensus       299 ~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F  370 (655)
T KOG3741|consen  299 VDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYF  370 (655)
T ss_pred             cCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHc
Confidence            578999999995433333334456788899999999999999887    34568999999984 67776653

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=93.93  E-value=0.02  Score=49.02  Aligned_cols=71  Identities=23%  Similarity=0.336  Sum_probs=56.3

Q ss_pred             HHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      +..-.++|+.+..+|.|+||.+..    -.+..+|||.+... ......+.++|+..+..+.|+++++++..|..+
T Consensus        44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~  119 (516)
T KOG1033|consen   44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYFHAWYER  119 (516)
T ss_pred             hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhheeceecC
Confidence            445557899999999999998433    34558999999765 345556788999999999999999999888643

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=93.88  E-value=0.19  Score=37.47  Aligned_cols=76  Identities=16%  Similarity=0.179  Sum_probs=54.8

Q ss_pred             cccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcc-eEeEEEEecCeeEEEEeeCCCCC
Q 043709           39 SMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV-RIIGCCVEKGVKILIYEHMPNKS  115 (253)
Q Consensus        39 ~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~~~~~~~~~~~~~lv~e~~~~g~  115 (253)
                      ...+.||+|.+|.+++  +.+..+|+|+-+.+  +....+..|+++|..+.--++. +++.+..    .++.|||..|-.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~~   98 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGRP   98 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCcc
Confidence            3447899999999776  67889999988764  3456799999999988654443 3333322    245699999878


Q ss_pred             hhhhc
Q 043709          116 LDYFL  120 (253)
Q Consensus       116 L~~~l  120 (253)
                      |..+-
T Consensus        99 L~~~~  103 (201)
T COG2112          99 LGKLE  103 (201)
T ss_pred             hhhhh
Confidence            77765

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=93.63  E-value=0.35  Score=37.72  Aligned_cols=72  Identities=22%  Similarity=0.206  Sum_probs=54.3

Q ss_pred             CccccccccceEeeCCCEEEEEEecccccccHHHHHHHHHHHHhccCCC--cceEeEEEEecCeeEEEEeeCCCCC
Q 043709           42 NKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN--LVRIIGCCVEKGVKILIYEHMPNKS  115 (253)
Q Consensus        42 ~~ig~G~fg~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~~~~~~~~~~~~~lv~e~~~~g~  115 (253)
                      +.||.|..+.++...+..+++|......  ......+|.++++.+..-.  +.+.+++....+...++||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTHKTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEecCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            6789999988877667777888876432  3345788999999886333  4677888777777889999999863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PRK10593 hypothetical protein; Provisional

Probab=92.71  E-value=0.49  Score=38.58  Aligned_cols=79  Identities=14%  Similarity=0.121  Sum_probs=55.7

Q ss_pred             ccccCccccccccceEee--CCCEEEEEEecccccccHHHHHHHHHHHHhcc-C--CCcceEeEEEEe---cCeeEEEEe
Q 043709           38 FSMENKLGEGGFGPGKLL--NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-D--INLVRIIGCCVE---KGVKILIYE  109 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~~~~~~~~---~~~~~lv~e  109 (253)
                      ..-.+.||.|..+.++..  .+..+.+|..+.  ......+..|...|+.+. +  -.+.++++++..   .+..++|||
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQGNPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCCCEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            344567999999986653  223566776432  112357899999999884 3  468888888754   366899999


Q ss_pred             eCCCCChhh
Q 043709          110 HMPNKSLDY  118 (253)
Q Consensus       110 ~~~~g~L~~  118 (253)
                      +++++++.+
T Consensus        94 ~i~G~~~~~  102 (297)
T PRK10593         94 RLRGVSVEA  102 (297)
T ss_pred             ccCCEecCC
Confidence            999987754

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=91.80  E-value=1.4  Score=33.58  Aligned_cols=74  Identities=12%  Similarity=0.124  Sum_probs=53.6

Q ss_pred             ccCccccccccceEe-eCCCEEEEEEecccc----------------cccHHHHHHHHHHHHhcc------CCCcceEeE
Q 043709           40 MENKLGEGGFGPGKL-LNGEQVAVKRLSSQS----------------GQGLEEFKNEMMLIAKLQ------DINLVRIIG   96 (253)
Q Consensus        40 ~~~~ig~G~fg~~~~-~~~~~vavK~~~~~~----------------~~~~~~~~~E~~~l~~l~------H~nIv~~~~   96 (253)
                      -...||+|+.-.++. +......||+.....                .....+..+|+.-...+.      +.+|.+++|
T Consensus         5 ~~~~i~~G~~R~cy~HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             CCcccccCCCceEEECCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            346789998777666 455667899887644                122355667776655554      899999999


Q ss_pred             EEEecCeeEEEEeeCCC
Q 043709           97 CCVEKGVKILIYEHMPN  113 (253)
Q Consensus        97 ~~~~~~~~~lv~e~~~~  113 (253)
                      +..++--+.+|+|.+..
T Consensus        85 ~veT~~G~Glv~e~I~d  101 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRD  101 (199)
T ss_pred             EEecCCceEEEEEEEEC
Confidence            99998888999987753

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PLN02876 acyl-CoA dehydrogenase

Probab=91.42  E-value=0.81  Score=42.95  Aligned_cols=76  Identities=17%  Similarity=0.337  Sum_probs=51.3

Q ss_pred             cCccccccccceEe---eCC---CEEEEEEecccc-cccHHHHHHHHHHHHhcc-CCCc--ceEeEEEEec---CeeEEE
Q 043709           41 ENKLGEGGFGPGKL---LNG---EQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQ-DINL--VRIIGCCVEK---GVKILI  107 (253)
Q Consensus        41 ~~~ig~G~fg~~~~---~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nI--v~~~~~~~~~---~~~~lv  107 (253)
                      ++.++.|.++..++   ..+   ..+++|+..... ......+.+|..+|+.+. |++|  .+++++|.+.   +..|+|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV  122 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI  122 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence            46677887776443   222   357777664321 123356889999999995 6665  7778887654   468999


Q ss_pred             EeeCCCCCh
Q 043709          108 YEHMPNKSL  116 (253)
Q Consensus       108 ~e~~~~g~L  116 (253)
                      |||++|..+
T Consensus       123 ME~v~G~~~  131 (822)
T PLN02876        123 MEYLEGRIF  131 (822)
T ss_pred             EEecCCccc
Confidence            999997544

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=91.08  E-value=1.2  Score=34.84  Aligned_cols=75  Identities=17%  Similarity=0.198  Sum_probs=51.3

Q ss_pred             Cccccccccc-eEee--CCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEeeCCCCChh
Q 043709           42 NKLGEGGFGP-GKLL--NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEHMPNKSLD  117 (253)
Q Consensus        42 ~~ig~G~fg~-~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~  117 (253)
                      +.|..|..+. ++.-  .+..+.+|......   .....+|+.+++.+. +--+.+++++....+..++||++++|.++.
T Consensus         4 ~~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~   80 (244)
T cd05150           4 ERVTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA   80 (244)
T ss_pred             eecCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence            3456676655 4442  23577788776432   345778999998884 445667788777666789999999987776


Q ss_pred             hh
Q 043709          118 YF  119 (253)
Q Consensus       118 ~~  119 (253)
                      ..
T Consensus        81 ~~   82 (244)
T cd05150          81 AL   82 (244)
T ss_pred             Hh
Confidence            54

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=90.61  E-value=1.3  Score=33.35  Aligned_cols=82  Identities=17%  Similarity=0.132  Sum_probs=55.5

Q ss_pred             CccccccccceEe--eCCCEEEEEEecccc--------cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           42 NKLGEGGFGPGKL--LNGEQVAVKRLSSQS--------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        42 ~~ig~G~fg~~~~--~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      ..+++|+-+..+.  +.+..+.+|.=....        .-..++..+|++++.+++--.|....=+..+.+...|+|||+
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            3466777766333  345556666443221        122356788999999987666666666667777888999999


Q ss_pred             CCCChhhhccCC
Q 043709          112 PNKSLDYFLFDP  123 (253)
Q Consensus       112 ~~g~L~~~l~~~  123 (253)
                      +|-.|.+++...
T Consensus        82 ~G~~lkd~l~~~   93 (204)
T COG3642          82 EGELLKDALEEA   93 (204)
T ss_pred             CChhHHHHHHhc
Confidence            999999888543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=87.51  E-value=0.38  Score=45.84  Aligned_cols=47  Identities=17%  Similarity=0.096  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHhccCCCcceEeEEEEecCe----eEEEEeeCCCCChhhhc
Q 043709           74 EEFKNEMMLIAKLQDINLVRIIGCCVEKGV----KILIYEHMPNKSLDYFL  120 (253)
Q Consensus        74 ~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~----~~lv~e~~~~g~L~~~l  120 (253)
                      ....-|...+.++.|+|++.++++....-.    +.+..++|..-++...+
T Consensus       227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~  277 (1351)
T KOG1035|consen  227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLL  277 (1351)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHH
Confidence            345567777888999999999998875432    33445788877777766

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=86.40  E-value=2.2  Score=32.72  Aligned_cols=76  Identities=17%  Similarity=0.242  Sum_probs=51.9

Q ss_pred             cCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCC--CcceEeEEEEe---cCeeEEEEeeCCC
Q 043709           41 ENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDI--NLVRIIGCCVE---KGVKILIYEHMPN  113 (253)
Q Consensus        41 ~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--nIv~~~~~~~~---~~~~~lv~e~~~~  113 (253)
                      ++.++.|..+.++.  ..+..+++|.....  .....+.+|..+++.+...  .+.+++.....   ....+++|+++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g   79 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG   79 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence            35678888877444  33468999987653  4556788899999888532  35666765433   2357899999999


Q ss_pred             CChhh
Q 043709          114 KSLDY  118 (253)
Q Consensus       114 g~L~~  118 (253)
                      .++..
T Consensus        80 ~~~~~   84 (239)
T PF01636_consen   80 RPLDD   84 (239)
T ss_dssp             EEHHH
T ss_pred             ccccc
Confidence            88777

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=83.87  E-value=4.6  Score=30.92  Aligned_cols=64  Identities=22%  Similarity=0.279  Sum_probs=46.6

Q ss_pred             cCccccCccccccc-cceEe--eCCCEEEEEEecc---ccc------------------ccHHHHHHHHHHHHhcc---C
Q 043709           36 DNFSMENKLGEGGF-GPGKL--LNGEQVAVKRLSS---QSG------------------QGLEEFKNEMMLIAKLQ---D   88 (253)
Q Consensus        36 ~~~~~~~~ig~G~f-g~~~~--~~~~~vavK~~~~---~~~------------------~~~~~~~~E~~~l~~l~---H   88 (253)
                      .+++.++.||.|.- |.+.+  -.|..||+|.+..   ..+                  --..-|.+|.+....|+   +
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            78999999999999 88555  5788999999431   000                  11235789999888774   4


Q ss_pred             CCc--ceEeEEEE
Q 043709           89 INL--VRIIGCCV   99 (253)
Q Consensus        89 ~nI--v~~~~~~~   99 (253)
                      .++  |+++|+..
T Consensus       117 e~~~Avkc~Gyl~  129 (207)
T PF13095_consen  117 EGLWAVKCHGYLL  129 (207)
T ss_pred             cCceEEEeeEEEE
Confidence            566  88898884

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=83.69  E-value=8.6  Score=29.28  Aligned_cols=36  Identities=14%  Similarity=0.292  Sum_probs=26.0

Q ss_pred             HHHHHHHHhcc--CCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           77 KNEMMLIAKLQ--DINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        77 ~~E~~~l~~l~--H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      .+|++.|+++.  .-++.+.+++    ..-++||||+.++.+
T Consensus        74 ~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~  111 (197)
T cd05146          74 EKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQV  111 (197)
T ss_pred             HHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCc
Confidence            37999999985  3566677754    445899999986433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=83.36  E-value=3.9  Score=35.11  Aligned_cols=100  Identities=17%  Similarity=-0.001  Sum_probs=53.1

Q ss_pred             CccccccceeehhHHHHHHHhC-CCCcCcCCCCCcc--hhh-hhhHhhhcCCCccccccccCCCCCCHH-HHHHHHHHhc
Q 043709          142 GVFSIKSDVFSFGVLLLETLSS-KKNAHFYNTNSLT--LLG-YVIWNLWNDGSLWDLMDPMLQTEASYP-ILKRYSNVDL  216 (253)
Q Consensus       142 ~~~~~~~DiwSlG~~l~ell~~-~~p~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~  216 (253)
                      ..-+...|.+.||+++++++.| +.||.+-......  -.+ .+.........-...-...-....++. ....+..+..
T Consensus       196 ~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~  275 (637)
T COG4248         196 FERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQ  275 (637)
T ss_pred             cCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHH
Confidence            3456788999999999999988 7787654332111  000 000000000000000000111222222 3456667778


Q ss_pred             cccCC--CCCCCCCHHHHHHHHhhccc
Q 043709          217 FCFRE--NATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       217 ~cl~~--~p~~RPs~~~il~~L~~~~~  241 (253)
                      +|+..  ++.-|||++.-+..|.+.-.
T Consensus       276 qaF~~~~~~~~RP~a~aW~aAl~al~~  302 (637)
T COG4248         276 QAFTESGVATPRPTAKAWVAALDALRQ  302 (637)
T ss_pred             HHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence            89874  46799999987766655543

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.55  E-value=6.3  Score=31.05  Aligned_cols=60  Identities=22%  Similarity=0.261  Sum_probs=45.1

Q ss_pred             eCCCEEEEEEecccccccHHHHHHHHHHHHhcc---CCCcceEeEEEEecCeeEEEEeeCCCCChh
Q 043709           55 LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ---DINLVRIIGCCVEKGVKILIYEHMPNKSLD  117 (253)
Q Consensus        55 ~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~  117 (253)
                      .....+.||+=.   .+....|..|+.-|..+.   .-+|.+++.+-.+.+..|+||||.+-|.+.
T Consensus        37 dg~~~~FvK~n~---~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          37 DGTDPFFVKCNQ---REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             cCCcceEEEecc---hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            345567887654   345677888988877764   356777788888889999999999987776

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=82.14  E-value=7.5  Score=31.57  Aligned_cols=73  Identities=18%  Similarity=0.179  Sum_probs=44.0

Q ss_pred             cccCccccccccce--EeeCCCEEEEEEecccccccHHHHHHHHHHHHhcc---CCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           39 SMENKLGEGGFGPG--KLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ---DINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        39 ~~~~~ig~G~fg~~--~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +-.+.++-|.....  ...+++.+.||.-..   .....|..|..-|+.|.   --.+.+++++....+..+++|||.+.
T Consensus        20 ~~~~~v~GG~i~~a~~~~~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~   96 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLDTDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEM   96 (288)
T ss_dssp             -EEEEE--SSSSEEEEEETTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE----
T ss_pred             eeeEecCCCChhheEEEECCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecC
Confidence            34456776666663  335678899998863   33456888998888883   34577888888777778999999976


Q ss_pred             C
Q 043709          114 K  114 (253)
Q Consensus       114 g  114 (253)
                      +
T Consensus        97 ~   97 (288)
T PF03881_consen   97 G   97 (288)
T ss_dssp             -
T ss_pred             C
Confidence            4

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=81.79  E-value=0.37  Score=43.07  Aligned_cols=75  Identities=12%  Similarity=0.045  Sum_probs=51.5

Q ss_pred             hcCccccCccccccccceEee--CCC-EEEEEEecccccccHHHHHHHHHHHHhccCCC-cceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKLL--NGE-QVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN-LVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~--~~~-~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++.+...+.+++|++++..++  +.+ ....+.+...     ....-++++|.+++||| .+..++-+.-++..++.|++
T Consensus       241 ~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i  315 (829)
T KOG0576|consen  241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRI  315 (829)
T ss_pred             ccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhh
Confidence            334555566788888874432  222 2224444321     34556788999999999 88888888888899999999


Q ss_pred             CCCC
Q 043709          111 MPNK  114 (253)
Q Consensus       111 ~~~g  114 (253)
                      +.+|
T Consensus       316 ~s~~  319 (829)
T KOG0576|consen  316 CSTG  319 (829)
T ss_pred             hcCC
Confidence            9987

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=81.36  E-value=5.6  Score=30.17  Aligned_cols=83  Identities=14%  Similarity=0.138  Sum_probs=56.6

Q ss_pred             ccCccccccccc--eEeeCCCEEEEEEeccc--------ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           40 MENKLGEGGFGP--GKLLNGEQVAVKRLSSQ--------SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        40 ~~~~ig~G~fg~--~~~~~~~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ....+-+|+-+.  .....|+...||.-...        ..-...+..+|++++.+++--.|..-.=++.+.+.-.|.||
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME   90 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME   90 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence            446677888776  34467888777754321        12334678899999999875555555555666666789999


Q ss_pred             eCCC-CChhhhccC
Q 043709          110 HMPN-KSLDYFLFD  122 (253)
Q Consensus       110 ~~~~-g~L~~~l~~  122 (253)
                      |.+| -++.+++..
T Consensus        91 ~~~g~~~vk~~i~~  104 (229)
T KOG3087|consen   91 FIDGASTVKDFILS  104 (229)
T ss_pred             eccchhHHHHHHHH
Confidence            9985 477887743

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=80.53  E-value=6.3  Score=30.70  Aligned_cols=76  Identities=13%  Similarity=0.132  Sum_probs=47.7

Q ss_pred             cCccccccccc-eEeeCCCEEEEEEecccccccHHHHHHHHHHHHhccCC---CcceEeEEEEec---CeeEEEEeeCCC
Q 043709           41 ENKLGEGGFGP-GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDI---NLVRIIGCCVEK---GVKILIYEHMPN  113 (253)
Q Consensus        41 ~~~ig~G~fg~-~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~~~~~~~~~---~~~~lv~e~~~~  113 (253)
                      ++.|+.|+... ++.. +..+.+|.....  .....+.+|..++..+...   -+.++++.....   ...+++|++++|
T Consensus         2 ~~~~~~gG~~n~vy~~-~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G   78 (235)
T cd05155           2 IEPVDSGGTDNATFRL-GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEG   78 (235)
T ss_pred             ceeccCCCcccceEEc-CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecC
Confidence            46678888776 5544 345677765432  2345788999999887521   344444433322   245889999999


Q ss_pred             CChhhh
Q 043709          114 KSLDYF  119 (253)
Q Consensus       114 g~L~~~  119 (253)
                      .++...
T Consensus        79 ~~l~~~   84 (235)
T cd05155          79 ETATAA   84 (235)
T ss_pred             CCCCcc
Confidence            887654

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	253
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-14
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		4e-06
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		5e-14
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		3e-06
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		9e-10
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-09
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		3e-09
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		4e-09
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-09
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		7e-08
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-06
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		5e-06
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		5e-06
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		2e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		2e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-05
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-05
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-05
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		4e-05
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-04
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-04
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-04
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		6e-04
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		7e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		7e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-04
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		7e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		7e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 26  FSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLE-EFKNEMM 81
           FSL  +  A+DNFS +N LG GGFG    G+L +G  VAVKRL  +  QG E +F+ E+ 
Sbjct: 28  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 82  LIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD-PANKGRLGWGTRVRI 137
           +I+     NL+R+ G C+    ++L+Y +M N S+   L + P ++  L W  R RI
Sbjct: 88  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 138 YALHGVFSIKSDVFSFGVLLLETLSSKKN---AHFYNTNSLTLLGYVIWNLWNDGSLWDL 194
           Y   G  S K+DVF +GV+LLE ++ ++    A   N + + LL +V   L  +  L  L
Sbjct: 214 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK-GLLKEKKLEAL 272
Query: 195 MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE 239
           +D  LQ       +++   V L C + +  +RP M E+V ML  +
Sbjct: 273 VDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 26  FSLASISAATDNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLE-EFKNEMM 81
           FSL  +  A+DNF  +N LG GGFG    G+L +G  VAVKRL  +  QG E +F+ E+ 
Sbjct: 20  FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 82  LIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD-PANKGRLGWGTRVRI 137
           +I+     NL+R+ G C+    ++L+Y +M N S+   L + P ++  L W  R RI
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 138 YALHGVFSIKSDVFSFGVLLLETLSSKKN---AHFYNTNSLTLLGYVIWNLWNDGSLWDL 194
           Y   G  S K+DVF +GV+LLE ++ ++    A   N + + LL +V   L  +  L  L
Sbjct: 206 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK-GLLKEKKLEAL 264
Query: 195 MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE 239
           +D  LQ       +++   V L C + +  +RP M E+V ML  +
Sbjct: 265 VDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 23  IPFFS----LASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEE 75
           +PF S    L  +  AT+NF  +  +G G FG    G L +G +VA+KR + +S QG+EE
Sbjct: 22  VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 76  FKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLF-DPANKGRLGWGTR 134
           F+ E+  ++  +  +LV +IG C E+   ILIY++M N +L   L+        + W  R
Sbjct: 82  FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 135 VRI--------YALHGVFSIKSDVFSFGVLLLETLSSK 164
           + I        + LH    I  DV S  +LL E    K
Sbjct: 142 LEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPK 179

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 23  IPFFS----LASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEE 75
           +PF S    L  +  AT+NF  +  +G G FG    G L +G +VA+KR + +S QG+EE
Sbjct: 22  VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 76  FKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLF-DPANKGRLGWGTR 134
           F+ E+  ++  +  +LV +IG C E+   ILIY++M N +L   L+        + W  R
Sbjct: 82  FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 135 VRI--------YALHGVFSIKSDVFSFGVLLLETLSSK 164
           + I        + LH    I  DV S  +LL E    K
Sbjct: 142 LEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPK 179

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 26  FSLASISAATDNFSME------NKLGEGGFGP--GKLLNGEQVAVKRLSSQSGQGLEE-- 75
           FS   +   T+NF         NK+GEGGFG      +N   VAVK+L++      EE  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 76  --FKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGT 133
             F  E+ ++AK Q  NLV ++G   +     L+Y +MPN SL   L        L W  
Sbjct: 75  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 134 RVRIYA--------LHGVFSIKSDVFSFGVLLLETLSSK 164
           R +I          LH    I  D+ S  +LL E  ++K
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAK 173

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 26  FSLASISAATDNFSME------NKLGEGGFGP--GKLLNGEQVAVKRLSSQSGQGLEE-- 75
           FS   +   T+NF         NK+GEGGFG      +N   VAVK+L++      EE  
Sbjct: 9   FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 76  --FKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGT 133
             F  E+ ++AK Q  NLV ++G   +     L+Y +MPN SL   L        L W  
Sbjct: 69  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 134 RVRIYA--------LHGVFSIKSDVFSFGVLLLETLSSK 164
           R +I          LH    I  D+ S  +LL E  ++K
Sbjct: 129 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAK 167

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 71/159 (44%), Gaps = 20/159 (12%)
Query: 26  FSLASISAATDNFSME------NKLGEGGFGP--GKLLNGEQVAVKRLSSQSGQGLEE-- 75
           FS   +   T+NF         NK+GEGGFG      +N   VAVK+L++      EE  
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 76  --FKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGT 133
             F  E+ ++AK Q  NLV ++G   +     L+Y +MPN SL   L        L W  
Sbjct: 75  QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 134 RVRIYA--------LHGVFSIKSDVFSFGVLLLETLSSK 164
           R +I          LH    I  D+ S  +LL E  ++K
Sbjct: 135 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAK 173

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 68/159 (42%), Gaps = 20/159 (12%)
Query: 26  FSLASISAATDNFSME------NKLGEGGFGP--GKLLNGEQVAVKRLSSQSGQGLEE-- 75
           FS   +   T+NF         NK GEGGFG      +N   VAVK+L++      EE  
Sbjct: 6   FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 76  --FKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGT 133
             F  E+ + AK Q  NLV ++G   +     L+Y + PN SL   L        L W  
Sbjct: 66  QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 134 RVRIYA--------LHGVFSIKSDVFSFGVLLLETLSSK 164
           R +I          LH    I  D+ S  +LL E  ++K
Sbjct: 126 RCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAK 164

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 37  NFSMENKLGEGGFGPGKL-----LNGEQ----VAVKRLSSQSGQGLEEFKNEMMLIAKLQ 87
           N  ++ +LGEG FG   L     L  EQ    VAVK L   S    ++F  E  L+  LQ
Sbjct: 14  NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             ++V+  G CVE    I+++E+M +  L+ FL
Sbjct: 74  HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 16/110 (14%)
Query: 44  LGEGGFGPGKLL--------NGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQDINLVRI 94
           LGEG FG  +L          GEQVAVK L  +SG   + + K E+ ++  L   N+V+ 
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 95  IGCCVEK---GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALH 141
            G C E    G+K LI E +P+ SL  +L  P NK ++    +++ YA+ 
Sbjct: 89  KGICTEDGGNGIK-LIMEFLPSGSLKEYL--PKNKNKINLKQQLK-YAVQ 134

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 16/110 (14%)
Query: 44  LGEGGFGPGKLL--------NGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKLQDINLVRI 94
           LGEG FG  +L          GEQVAVK L  +SG   + + K E+ ++  L   N+V+ 
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 95  IGCCVEK---GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALH 141
            G C E    G+K LI E +P+ SL  +L  P NK ++    +++ YA+ 
Sbjct: 77  KGICTEDGGNGIK-LIMEFLPSGSLKEYL--PKNKNKINLKQQLK-YAVQ 122

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 135

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 17  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 77  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 105

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 20  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 80  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 108

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 15  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 75  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 103

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 21  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 81  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 109

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 14  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 74  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 102

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 22  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 82  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 110

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 23  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 83  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 111

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 79  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 76  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 104

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 14/123 (11%)
Query: 12  TEARGKSKESCI----PFFSLASISA-ATDNFSMENKLGEGGFGPGKL-----LNGEQ-- 59
           TE +G   +  I     +FS A +      +  ++ +LGEG FG   L     L  EQ  
Sbjct: 12  TEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDK 71
Query: 60  --VAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLD 117
             VAVK L   S    ++F+ E  L+  LQ  ++VR  G C E    ++++E+M +  L+
Sbjct: 72  MLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 118 YFL 120
            FL
Sbjct: 132 RFL 134

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 10/89 (11%)
Query: 42  NKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
            +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 94  IIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
             G C   G +   LI E++P  SL  +L
Sbjct: 94  YKGVCYSAGRRNLKLIMEYLPYGSLRDYL 122

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 37  NFSMENKLGEGGFGPGKL-----LNGEQ----VAVKRLSSQSGQGLEEFKNEMMLIAKLQ 87
           +  ++ +LGEG FG   L     L  EQ    VAVK L   S    ++F+ E  L+  LQ
Sbjct: 13  DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 72
Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             ++VR  G C E    ++++E+M +  L+ FL
Sbjct: 73  HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 105

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 43  KLGEGGFGPGKL-----LNGEQ----VAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
           +LGEG FG   L     L  EQ    VAVK L   S    ++F+ E  L+  LQ  ++VR
Sbjct: 25  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 94  IIGCCVEKGVKILIYEHMPNKSLDYFL 120
             G C E    ++++E+M +  L+ FL
Sbjct: 85  FFGVCTEGRPLLMVFEYMRHGDLNRFL 111

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 43  KLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRI 94
           +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ  N+V+ 
Sbjct: 20  QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 95  IGCCVEKGVK--ILIYEHMPNKSLDYFL 120
            G C   G +   LI E +P  SL  +L
Sbjct: 80  KGVCYSAGRRNLKLIMEFLPYGSLREYL 107

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 36  DNFSMENKLGEGGFG-------PGKLLNGEQ---VAVKRLSSQSGQGLE-EFKNEMMLIA 84
           +N      +GEG FG       PG LL  E    VAVK L  ++   ++ +F+ E  L+A
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPG-LLPYEPFTMVAVKMLKEEASADMQADFQREAALMA 105
Query: 85  KLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           +  + N+V+++G C       L++E+M    L+ FL
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D     
Sbjct: 207 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPD----- 255
Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             + P  +R +++   C++ N   RPT LEIV++L +++ +  +P+ S F
Sbjct: 256 --NCP--ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL-HPSFPEVSFF 300

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D     
Sbjct: 204 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPD----- 252
Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             + P  +R +++   C++ N   RPT LEIV++L +++ +  +P+ S F
Sbjct: 253 --NCP--ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL-HPSFPEVSFF 297

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D     
Sbjct: 206 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPD----- 254
Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             + P  +R +++   C++ N   RPT LEIV++L +++ +  +P+ S F
Sbjct: 255 --NCP--ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL-HPSFPEVSFF 299

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D     
Sbjct: 207 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPD----- 255
Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             + P  +R +++   C++ N   RPT LEIV++L +++ +  +P+ S F
Sbjct: 256 --NCP--ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL-HPSFPEVSFF 300

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D     
Sbjct: 208 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPD----- 256
Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             + P  +R +++   C++ N   RPT LEIV++L +++ +  +P+ S F
Sbjct: 257 --NCP--ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL-HPSFPEVSFF 301

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D     
Sbjct: 207 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPD----- 255
Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             + P  +R +++   C++ N   RPT LEIV++L +++ +  +P+ S F
Sbjct: 256 --NCP--ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL-HPSFPEVSFF 300

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D     
Sbjct: 207 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPD----- 255
Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             + P  +R +++   C++ N   RPT LEIV++L +++ +  +P+ S F
Sbjct: 256 --NCP--ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL-HPSFPEVSFF 300

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 16/110 (14%)
Query: 142 GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT 201
           GVF+  SD++SFGV+L E ++S     +   ++  +L +V+     DG   D  D     
Sbjct: 207 GVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSNEQVLKFVM-----DGGYLDQPD----- 255
Query: 202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             + P  +R +++   C++ N   RPT LEIV++L +++ +  +P+ S F
Sbjct: 256 --NCP--ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL-HPSFPEVSFF 300

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	253
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-46
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	2e-22
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-44
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-19
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-43
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	7e-16
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-23
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-11
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-19
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-06
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-15
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-04
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-15
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	9e-05
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-14
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-07
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	3e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-08
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	8e-14
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-13
4aoj_A	329	High affinity nerve growth factor receptor; transf	5e-05
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-13
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-13
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-07
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-12
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-05
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-12
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	7e-12
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-05
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-12
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-12
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	9e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-05
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-11
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	2e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	2e-11
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-06
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	3e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-05
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-11
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-05
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	5e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	5e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	5e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-10
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-05
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-10
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-04
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-10
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	8e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-10
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-06
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-10
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-10
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	9e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	3e-10
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	6e-06
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	9e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	5e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-10
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	9e-06
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-10
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-10
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	8e-10
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-09
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	7e-05
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-09
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-09
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	9e-05
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-09
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	4e-09
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-09
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	7e-05
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-05
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	7e-09
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-04
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	9e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-04
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-08
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-04
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	8e-06
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	2e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-04
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	3e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-04
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-04
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	7e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  156 bits (397), Expect = 1e-46
 Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 5/117 (4%)

Query: 26  FSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLE-EFKNEMM 81
           FSL  +  A+DNFS +N LG GGFG    G+L +G  VAVKRL  +  QG E +F+ E+ 
Sbjct: 20  FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVE 79

Query: 82  LIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD-PANKGRLGWGTRVRI 137
           +I+     NL+R+ G C+    ++L+Y +M N S+   L + P ++  L W  R RI
Sbjct: 80  MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 93.0 bits (232), Expect = 2e-22
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 138 YALHGVFSIKSDVFSFGVLLLETLSSKKN---AHFYNTNSLTLLGYVIWNLWNDGSLWDL 194
           Y   G  S K+DVF +GV+LLE ++ ++    A   N + + LL +V   L  +  L  L
Sbjct: 206 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV-KGLLKEKKLEAL 264

Query: 195 MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE 239
           +D  LQ       +++   V L C + +  +RP M E+V ML  +
Sbjct: 265 VDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  150 bits (380), Expect = 3e-44
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 14/125 (11%)

Query: 26  FSLASISAATDNFSME------NKLGEGGFGP---GKLLNGEQVAVKRLSS----QSGQG 72
           FS   +   T+NF         NK+GEGGFG    G  +N   VAVK+L++     + + 
Sbjct: 15  FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73

Query: 73  LEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWG 132
            ++F  E+ ++AK Q  NLV ++G   +     L+Y +MPN SL   L        L W 
Sbjct: 74  KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133

Query: 133 TRVRI 137
            R +I
Sbjct: 134 MRCKI 138

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 83.4 bits (207), Expect = 5e-19
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 8/101 (7%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND-GSLWDLMDPM 198
           L G  + KSD++SFGV+LLE ++        +     LL      + ++  ++ D +D  
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPAVDE-HREPQLLLDIK-EEIEDEEKTIEDYIDKK 264

Query: 199 LQTEASYPI--LKRYSNVDLFCFRENATDRPTMLEIVSMLS 237
           +          ++   +V   C  E    RP + ++  +L 
Sbjct: 265 MN---DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  148 bits (376), Expect = 2e-43
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 4/116 (3%)

Query: 26  FSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMML 82
             L  +  AT+NF  +  +G G FG    G L +G +VA+KR + +S QG+EEF+ E+  
Sbjct: 29  VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIET 88

Query: 83  IAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPAN-KGRLGWGTRVRI 137
           ++  +  +LV +IG C E+   ILIY++M N +L   L+        + W  R+ I
Sbjct: 89  LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEI 144

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 74.5 bits (184), Expect = 7e-16
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 4/101 (3%)

Query: 138 YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIW--NLWNDGSLWDLM 195
           Y + G  + KSDV+SFGV+L E L ++          +  L    W     N+G L  ++
Sbjct: 212 YFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNL--AEWAVESHNNGQLEQIV 269

Query: 196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
           DP L  +     L+++ +  + C   ++ DRP+M +++  L
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 94.8 bits (236), Expect = 4e-23
 Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 13/120 (10%)

Query: 26  FSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMML 82
               ++   +    +      G FG     +L   E VAVK    Q  Q   + + E+  
Sbjct: 14  LGTENLYFQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQS-WQNEYEVYS 71

Query: 83  IAKLQDINLVRIIGCCVE----KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIY 138
           +  ++  N+++ IG             LI       SL  FL        + W     I 
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIA 127

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 60.5 bits (147), Expect = 5e-11
 Identities = 12/101 (11%), Positives = 34/101 (33%), Gaps = 6/101 (5%)

Query: 144 FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDL-----MDPM 198
             ++ D+++ G++L E  S    A       +      I    +   + ++       P+
Sbjct: 215 AFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPV 274

Query: 199 LQTE-ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           L+     +  +         C+  +A  R +   +   ++ 
Sbjct: 275 LRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 84.9 bits (210), Expect = 2e-19
 Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 18/122 (14%)

Query: 26  FSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE--M 80
            + +  S   DN  +   +G G +G    G L +   VAVK  S  + Q    F NE  +
Sbjct: 3   AAASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNI 58

Query: 81  MLIAKLQDINLVRIIGCCVEKGVKI-----LIYEHMPNKSLDYFLFDPANKGRLGWGTRV 135
             +  ++  N+ R I               L+ E+ PN SL  +L    +     W +  
Sbjct: 59  YRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSC 114

Query: 136 RI 137
           R+
Sbjct: 115 RL 116

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 46.4 bits (110), Expect = 3e-06
 Identities = 10/117 (8%), Positives = 37/117 (31%), Gaps = 11/117 (9%)

Query: 144 FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA 203
              + D+++ G++  E      +     +     + +    + N  +  D+   + + + 
Sbjct: 212 ALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF-QTEVGNHPTFEDMQVLVSREKQ 270

Query: 204 SYPILKRYSNVDLF----------CFRENATDRPTMLEIVSMLSNEIVNLPYPQQSA 250
                + +    L           C+ ++A  R T       ++  ++     +  +
Sbjct: 271 RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVS 327

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 6/107 (5%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDIN 90
            + +++ K+G G FG     +  +G  VAVK L  Q    + + EF  E+ ++ +L+  N
Sbjct: 37  CDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           +V  +G   +     ++ E++   SL   L     + +L    R+ +
Sbjct: 96  IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSM 142

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 21/117 (17%), Positives = 44/117 (37%), Gaps = 32/117 (27%)

Query: 144 FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN-------LWNDGSLWDLMD 196
            + KSDV+SFGV+L E  + ++   + N N   ++  V +           +  +  ++ 
Sbjct: 216 SNEKSDVYSFGVILWELATLQQP--WGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAII- 272

Query: 197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN--LPYPQQSAF 251
                       +        C+      RP+   I+ +L   ++   +P P +S  
Sbjct: 273 ------------EG-------CWTNEPWKRPSFATIMDLL-RPLIKSAVPPPNRSDL 309

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 71.6 bits (176), Expect = 8e-15
 Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
               +E  +G G FG     K    + VA+K++ S+S    + F  E+  ++++   N+V
Sbjct: 8   KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESESE--RKAFIVELRQLSRVNHPNIV 64

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++ G C+      L+ E+    SL   L              +  
Sbjct: 65  KLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 26/107 (24%)

Query: 144 FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL------WNDGSLWDLMDP 197
           +S K DVFS+G++L E ++ +K        +  ++  V               +  LM  
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM-- 237

Query: 198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP 244
                       R       C+ ++ + RP+M EIV ++++ +   P
Sbjct: 238 -----------TR-------CWSKDPSQRPSMEEIVKIMTHLMRYFP 266

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 70.1 bits (172), Expect = 3e-14
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 12/105 (11%)

Query: 36  DNFSMENKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ 87
            +     +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ
Sbjct: 41  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 100

Query: 88  DINLVRIIGCCVEKGVK--ILIYEHMPNKSLDYFLFDPANKGRLG 130
             N+V+  G C   G +   LI E++P  SL  +L    +K R+ 
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERID 143

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 14/107 (13%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-- 196
                FS+ SDV+SFGV+L E  +  + +       + ++G           L +L+   
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279

Query: 197 -----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
                P    +  Y I+         C+  N   RP+  ++   +  
Sbjct: 280 GRLPRPDGCPDEIYMIMTE-------CWNNNVNQRPSFRDLALRVDQ 319

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 12/105 (11%)

Query: 36  DNFSMENKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ 87
            +     +LG+G FG        P +   GE VAVK+L   + + L +F+ E+ ++  LQ
Sbjct: 10  RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ 69

Query: 88  DINLVRIIGCCVEKGVK--ILIYEHMPNKSLDYFLFDPANKGRLG 130
             N+V+  G C   G +   LI E++P  SL  +L    +K R+ 
Sbjct: 70  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERID 112

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 51.1 bits (123), Expect = 8e-08
 Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 14/107 (13%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-- 196
                FS+ SDV+SFGV+L E  +  + +       + ++G           L +L+   
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248

Query: 197 -----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
                P    +  Y I+         C+  N   RP+  ++   +  
Sbjct: 249 GRLPRPDGCPDEIYMIMTE-------CWNNNVNQRPSFRDLALRVDQ 288

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 68.9 bits (169), Expect = 8e-14
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 12/105 (11%)

Query: 36  DNFSMENKLGEGGFG--------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ 87
            +    ++LG+G FG        P     G  VAVK+L         +F+ E+ ++  L 
Sbjct: 23  RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH 82

Query: 88  DINLVRIIGCCVEKGVK--ILIYEHMPNKSLDYFLFDPANKGRLG 130
              +V+  G     G +   L+ E++P+  L  FL    ++ RL 
Sbjct: 83  SDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLD 125

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 21/123 (17%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-- 196
               +FS +SDV+SFGV+L E  +    +   +   L ++G              L++  
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS----RLLELL 257

Query: 197 --------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQ 248
                   P       + ++K        C+  +  DRP+   +   L          + 
Sbjct: 258 EEGQRLPAPPACPAEVHELMKL-------CWAPSPQDRPSFSALGPQLDMLWSGSRGCET 310

Query: 249 SAF 251
            AF
Sbjct: 311 HAF 313

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 13/106 (12%)

Query: 36  DNFSMENKLGEGGFG--------PGKLLNGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKL 86
                   LGEG FG        P     GEQVAVK L  +SG   + + K E+ ++  L
Sbjct: 21  RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL 80

Query: 87  QDINLVRIIGCCVEKGVK--ILIYEHMPNKSLDYFLFDPANKGRLG 130
              N+V+  G C E G     LI E +P+ SL  +L  P NK ++ 
Sbjct: 81  YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKNKIN 124

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 19/109 (17%), Positives = 41/109 (37%), Gaps = 21/109 (19%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-- 196
            +   F I SDV+SFGV L E L+   +        L ++G     +    ++  L++  
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM----TVTRLVNTL 256

Query: 197 --------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS 237
                   P    +  Y ++++       C+    ++R +   ++    
Sbjct: 257 KEGKRLPCPPNCPDEVYQLMRK-------CWEFQPSNRTSFQNLIEGFE 298

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 66.9 bits (164), Expect = 3e-13
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 9/94 (9%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGE------QVAVKRLSSQSGQGLEEFKNEMMLIAKL 86
            +  ++ +LGEG FG     +  N         VAVK L   S    ++F+ E  L+  L
Sbjct: 41  RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           Q  ++VR  G C E    ++++E+M +  L+ FL
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 31/105 (29%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLW 192
           L+  F+ +SDV+SFGV+L E  +          N    +       G             
Sbjct: 233 LYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID---CITQGRE----------- 278

Query: 193 DLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
             ++ P       Y I++        C++     R ++ ++ + L
Sbjct: 279 --LERPRACPPEVYAIMRG-------CWQREPQQRHSIKDVHARL 314

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 67.0 bits (164), Expect = 4e-13
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 11/96 (11%)

Query: 36  DNFSMENKLGEGGFG--------PGKLLNGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKL 86
                   LGEG FG        P     GE VAVK L + +G Q    +K E+ ++  L
Sbjct: 31  RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL 90

Query: 87  QDINLVRIIGCCVEKGVK--ILIYEHMPNKSLDYFL 120
              ++++  GCC + G     L+ E++P  SL  +L
Sbjct: 91  YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL 126

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 13/106 (12%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-- 196
                F   SDV+SFGV L E L+   ++    T  L L+G     +        L    
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268

Query: 197 ----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
               P       Y ++K        C+   A+ RPT   ++ +L  
Sbjct: 269 RLPRPDKCPAEVYHLMKN-------CWETEASFRPTFENLIPILKT 307

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 66.2 bits (162), Expect = 5e-13
 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 15/113 (13%)

Query: 36  DNFSMENKLGEGGFGP---GKLL-NGEQVAVKRLSSQSGQG-------LEEFKNEMMLIA 84
           +    E ++G+GGFG    G+L+ +   VA+K L     +G        +EF+ E+ +++
Sbjct: 19  NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMS 78

Query: 85  KLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
            L   N+V++ G         ++ E +P   L + L D A+   + W  ++R+
Sbjct: 79  NLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRL 127

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 17/102 (16%)

Query: 137 IYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG--SLWDL 194
           I A    ++ K+D +SF ++L   L+ +     ++  S   + ++          ++ + 
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEG---PFDEYSYGKIKFINMIREEGLRPTIPED 254

Query: 195 MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
             P L+      +++        C+  +   RP    IV  L
Sbjct: 255 CPPRLRN-----VIEL-------CWSGDPKKRPHFSYIVKEL 284

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 66.1 bits (162), Expect = 5e-13
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 9/94 (9%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGE------QVAVKRLSSQSGQGLEEFKNEMMLIAKL 86
            +  ++ +LGEG FG     +  N         VAVK L   +    ++F+ E  L+  L
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           Q  ++V+  G C +    I+++E+M +  L+ FL
Sbjct: 75  QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 31/114 (27%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSL 191
            ++  F+ +SDV+SFGV+L E  +          N            G V          
Sbjct: 207 IMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE---CITQGRV---------- 253

Query: 192 WDLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP 244
              ++ P +  +  Y ++         C++     R  + EI  +L       P
Sbjct: 254 ---LERPRVCPKEVYDVMLG-------CWQREPQQRLNIKEIYKILHALGKATP 297

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 66.2 bits (162), Expect = 6e-13
 Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 6/106 (5%)

Query: 36  DNFSMENKLGEGGFGP---GKL-LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
            +      LG+G FG          GE + +K L     +    F  E+ ++  L+  N+
Sbjct: 10  SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++ IG   +      I E++   +L   +       +  W  RV  
Sbjct: 70  LKFIGVLYKDKRLNFITEYIKGGTLRGIIKS--MDSQYPWSQRVSF 113

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 14/104 (13%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ 200
              +  K DVFSFG++L E +         +    T+   +           D   P   
Sbjct: 196 GRSYDEKVDVFSFGIVLCEIIGRVNA--DPDYLPRTMDFGLNVR-----GFLDRYCPPNC 248

Query: 201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP 244
             + +PI  R       C   +   RP+ +++   L    ++L 
Sbjct: 249 PPSFFPITVR-------CCDLDPEKRPSFVKLEHWLETLRMHLA 285

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGE------QVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
                  +LGE  FG    G L           VA+K L     G   EEF++E ML A+
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           LQ  N+V ++G   +     +I+ +  +  L  FL
Sbjct: 69  LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 37/110 (33%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGY----------VIWNLWNDG 189
           ++G FSI SD++S+GV+L E  S                G           V+  + N  
Sbjct: 203 MYGKFSIDSDIWSYGVVLWEVFS---------------YGLQPYCGYSNQDVVEMIRNRQ 247

Query: 190 SLWDLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
               ++  P       Y ++         C+ E  + RP   +I S L  
Sbjct: 248 ----VLPCPDDCPAWVYALMIE-------CWNEFPSRRPRFKDIHSRLRA 286

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 9/109 (8%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDIN 90
              +   KL E   G    G+   G  + VK L  +  S +   +F  E   +      N
Sbjct: 10  KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN 68

Query: 91  LVRIIGCCVEKGVKIL--IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++ ++G C          I   MP  SL   L +  N   +     V+ 
Sbjct: 69  VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNF-VVDQSQAVKF 116

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 63.5 bits (155), Expect = 7e-12
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)

Query: 36  DNFSMENKLGEGGFG-------PGKLLNGE--QVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
           +N      +GEG FG       PG L       VAVK L    S     +F+ E  L+A+
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             + N+V+++G C       L++E+M    L+ FL
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 31/107 (28%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLW 192
            +  ++ +SDV+++GV+L E  S          +            G +           
Sbjct: 249 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY---YVRDGNI----------- 294

Query: 193 DLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
             +  P       Y +++        C+ +   DRP+   I  +L  
Sbjct: 295 --LACPENCPLELYNLMRL-------CWSKLPADRPSFCSIHRILQR 332

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 62.3 bits (152), Expect = 9e-12
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 12/105 (11%)

Query: 40  MENKLGEGGFGP---GKLLNGEQVAVKRL----SSQSGQGLEEFKNEMMLIAKLQDINLV 92
           +E  +G GGFG         G++VAVK           Q +E  + E  L A L+  N++
Sbjct: 11  LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
            + G C+++    L+ E      L+  L    +  R+     V  
Sbjct: 70  ALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNW 110

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 19/98 (19%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ 200
             +FS  SDV+S+GVLL E L+ +    F   + L +   V  N         L  P+  
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVP--FRGIDGLAVAYGVAMN--------KLALPIPS 237

Query: 201 T--EASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
           T  E    +++        C+  +   RP+   I+  L
Sbjct: 238 TCPEPFAKLMED-------CWNPDPHSRPSFTNILDQL 268

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 63.1 bits (154), Expect = 9e-12
 Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ---VAVKRL-SSQSGQGLEEFKNEMMLIAKLQD 88
           ++   ++ +GEG FG     ++         A+KR+    S     +F  E+ ++ KL  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84

Query: 89  -INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             N++ ++G C  +G   L  E+ P+ +L  FL
Sbjct: 85  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 31/105 (29%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLW 192
            + V++  SDV+S+GVLL E +S           A  Y        GY            
Sbjct: 214 NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE---KLPQGYR----------- 259

Query: 193 DLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
             ++ P+   +  Y ++++       C+RE   +RP+  +I+  L
Sbjct: 260 --LEKPLNCDDEVYDLMRQ-------CWREKPYERPSFAQILVSL 295

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 12/104 (11%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ-----VAVKRL-SSQSGQGLEEFKNEMMLIAKL 86
             F     LG G FG    G  +   +     VA+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLG 130
            + ++ R++G C+   V++ I + MP   L  ++ +  +K  +G
Sbjct: 75  DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE--HKDNIG 115

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 41/112 (36%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG---YVIWNLWNDGSLWDLMD 196
           LH +++ +SDV+S+GV + E ++                G   Y    +       ++  
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT---------------FGSKPY--DGIPAS----EISS 230

Query: 197 ----------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
                     P + T   Y I+++       C+  +A  RP   E++   S 
Sbjct: 231 ILEKGERLPQPPICTIDVYMIMRK-------CWMIDADSRPKFRELIIEFSK 275

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 61.5 bits (150), Expect = 2e-11
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 7/89 (7%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
               +   +G+G FG    G    G +VAVK +  ++    + F  E  ++ +L+  NLV
Sbjct: 21  KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 77

Query: 93  RIIGCCVEKGVKILI-YEHMPNKSLDYFL 120
           +++G  VE+   + I  E+M   SL  +L
Sbjct: 78  QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 106

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 42.6 bits (101), Expect = 5e-05
 Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 25/105 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDL 194
                FS KSDV+SFG+LL E  S  +  +        +     GY              
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK------------- 232

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           MD P     A Y ++K        C+  +A  RP+ L++   L +
Sbjct: 233 MDAPDGCPPAVYEVMKN-------CWHLDAAMRPSFLQLREQLEH 270

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGE------QVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
            N ++   LG G FG    G++          QVAVK L    S Q   +F  E ++I+K
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
               N+VR IG  ++   + ++ E M    L  FL
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL 165

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 22/117 (18%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-PM 198
           + G+F+ K+D +SFGVLL E  S     +   +N   +L +V       G     MD P 
Sbjct: 259 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVT-----SGG---RMDPPK 309

Query: 199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML-----SNEIVNLPYPQQSA 250
                 Y I+ +       C++    DRP    I+  +       +++N   P +  
Sbjct: 310 NCPGPVYRIMTQ-------CWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYG 359

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 7/89 (7%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
               +   +G+G FG    G    G +VAVK +  ++    + F  E  ++ +L+  NLV
Sbjct: 193 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCI--KNDATAQAFLAEASVMTQLRHSNLV 249

Query: 93  RIIGCCVEKGVKI-LIYEHMPNKSLDYFL 120
           +++G  VE+   + ++ E+M   SL  +L
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYL 278

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 25/105 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDL 194
                FS KSDV+SFG+LL E  S  +  +        +     GY              
Sbjct: 358 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK------------- 404

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           MD P     A Y ++K        C+  +A  RPT L++   L +
Sbjct: 405 MDAPDGCPPAVYDVMKN-------CWHLDAATRPTFLQLREQLEH 442

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDIN 90
              ++  ++G G FG    GK  +G+ VAVK L+    + Q L+ FKNE+ ++ K + +N
Sbjct: 24  GQITVGQRIGSGSFGTVYKGKW-HGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 81

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++  +G      + I + +     SL + L     + +      + I
Sbjct: 82  ILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHAS--ETKFEMKKLIDI 125

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 18/102 (17%), Positives = 42/102 (41%), Gaps = 17/102 (16%)

Query: 138 YALHGVFSIKSDVFSFGVLLLETLSSK---KNAHFYNTNSLTLLGYVIWNLWNDGSLWDL 194
                 +S +SDV++FG++L E ++ +    N        +     +I  +        L
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN--------INNRDQIIEMVGRGS----L 243

Query: 195 MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
              + +  ++ P  KR   +   C ++   +RP+   I++ +
Sbjct: 244 SPDLSKVRSNCP--KRMKRLMAECLKKKRDERPSFPRILAEI 283

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 5/88 (5%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           +   +  +LG G FG    G      +VAVK L   S    + F  E  L+ +LQ   LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS-PDAFLAEANLMKQLQHQRLV 71

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           R+     ++ + I I E+M N SL  FL
Sbjct: 72  RLYAVVTQEPIYI-ITEYMENGSLVDFL 98

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 25/105 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDL 194
             +G F+IKSDV+SFG+LL E ++  +  +   TN   +     GY              
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR------------- 228

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           M  P    E  Y +++        C++E   DRPT   + S+L +
Sbjct: 229 MVRPDNCPEELYQLMRL-------CWKERPEDRPTFDYLRSVLED 266

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 12/104 (11%)

Query: 36  DNFSMENKLGEGGFG--------PGKLLNGEQVAVKRLSSQSG-QGLEEFKNEMMLIAKL 86
                   LG G FG        P        V +K +  +SG Q  +   + M+ I  L
Sbjct: 13  TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLG 130
              ++VR++G C    +++ + +++P  SL   +    ++G LG
Sbjct: 73  DHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQ--HRGALG 113

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 29/113 (25%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-- 196
              G ++ +SDV+S+GV + E ++                G   +       + DL++  
Sbjct: 189 IHFGKYTHQSDVWSYGVTVWELMT---------------FGAEPYAGLRLAEVPDLLEKG 233

Query: 197 -----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP 244
                P + T   Y ++ +       C+  +   RPT  E+ +  +    + P
Sbjct: 234 ERLAQPQICTIDVYMVMVK-------CWMIDENIRPTFKELANEFTRMARDPP 279

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGE------QVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
            N ++   LG G FG    G++          QVAVK L    S Q   +F  E ++I+K
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
               N+VR IG  ++   + ++ E M    L  FL
Sbjct: 90  FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL 124

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 22/117 (18%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-PM 198
           + G+F+ K+D +SFGVLL E  S     +   +N   +L +V       G     MD P 
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVT-----SGG---RMDPPK 268

Query: 199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML-----SNEIVNLPYPQQSA 250
                 Y I+ +       C++    DRP    I+  +       +++N   P +  
Sbjct: 269 NCPGPVYRIMTQ-------CWQHQPEDRPNFAIILERIEYCTQDPDVINTALPIEYG 318

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 60.3 bits (147), Expect = 5e-11
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
              +   ++G G FG    G  LN ++VA+K +   +    E+F  E  ++ KL    LV
Sbjct: 8   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLV 66

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++ G C+E+    L+ E M +  L  +L
Sbjct: 67  QLYGVCLEQAPICLVTEFMEHGCLSDYL 94

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 25/105 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL----LGYVIWNLWNDGSLWDL 194
                +S KSDV+SFGVL+ E  S  K  +   +NS  +     G+              
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF-------------R 223

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           +  P L +   Y I+         C+RE   DRP    ++  L+ 
Sbjct: 224 LYKPRLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQLAE 261

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 60.9 bits (148), Expect = 5e-11
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           ++  +E KLG G FG           +VAVK +   S   +E F  E  ++  LQ   LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLV 246

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++     ++ + I I E M   SL  FL
Sbjct: 247 KLHAVVTKEPIYI-ITEFMAKGSLLDFL 273

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 25/105 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDL 194
              G F+IKSDV+SFG+LL+E ++  +  +   +N   +     GY              
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR------------- 403

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           M  P    E  Y I+ R       C++    +RPT   I S+L +
Sbjct: 404 MPRPENCPEELYNIMMR-------CWKNRPEERPTFEYIQSVLDD 441

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 60.7 bits (147), Expect = 8e-11
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           ++  +E KLG+G FG    G      +VA+K L   +    E F  E  ++ KL+   LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLV 325

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++     E+ + I + E+M   SL  FL
Sbjct: 326 QLYAVVSEEPIYI-VTEYMSKGSLLDFL 352

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 46.0 bits (109), Expect = 5e-06
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 25/107 (23%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDLMD 196
           +G F+IKSDV+SFG+LL E  +  +  +    N   L     GY              M 
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-------------MP 484

Query: 197 -PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN 242
            P    E+ + ++ +       C+R+   +RPT   + + L +   +
Sbjct: 485 CPPECPESLHDLMCQ-------CWRKEPEERPTFEYLQAFLEDYFTS 524

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ-VAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
            + +M++KLG G +G    G        VAVK L   + + +EEF  E  ++ +++  NL
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 278

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           V+++G C  +    +I E M   +L  +L
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYL 307

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 25/103 (24%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDLMD 196
           +  FSIKSDV++FGVLL E  +   + +     S         Y              M+
Sbjct: 393 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-------------ME 439

Query: 197 -PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
            P    E  Y +++        C++ N +DRP+  EI      
Sbjct: 440 RPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFET 475

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGE------QVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
           +  +M  +LG+G FG    G            +VA+K +  + S +   EF NE  ++ +
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
               ++VR++G   +    ++I E M    L  +L
Sbjct: 85  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL 119

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 15/101 (14%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML 199
             GVF+  SDV+SFGV+L E  +  +  +   +N   +L +V+     +G L D   P  
Sbjct: 213 KDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVM-----EGGLLDK--PDN 264

Query: 200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI 240
             +  + +++        C++ N   RP+ LEI+S +  E+
Sbjct: 265 CPDMLFELMRM-------CWQYNPKMRPSFLEIISSIKEEM 298

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 12/104 (11%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ-----VAVKRL-SSQSGQGLEEFKNEMMLIAKL 86
             F     LG G FG    G  +   +     VA+K L  + S +  +E  +E  ++A +
Sbjct: 15  TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLG 130
            + ++ R++G C+   V++ I + MP   L  ++ +  +K  +G
Sbjct: 75  DNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVRE--HKDNIG 115

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 29/106 (27%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD--- 196
           LH +++ +SDV+S+GV + E ++                G   ++      +  +++   
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMT---------------FGSKPYDGIPASEISSILEKGE 236

Query: 197 ----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
               P + T   Y I+ +       C+  +A  RP   E++   S 
Sbjct: 237 RLPQPPICTIDVYMIMVK-------CWMIDADSRPKFRELIIEFSK 275

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
            + +   +LG G FG    GK      VA+K +   S    +EF  E  ++  L    LV
Sbjct: 24  KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLV 82

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++ G C ++    +I E+M N  L  +L
Sbjct: 83  QLYGVCTKQRPIFIITEYMANGCLLNYL 110

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 25/107 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL----LGYVIWNLWNDGSLWDL 194
            ++  FS KSD+++FGVL+ E  S  K  +   TNS T      G               
Sbjct: 193 LMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLR------------- 239

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI 240
           +  P L +E  Y I+         C+ E A +RPT   ++S + + +
Sbjct: 240 LYRPHLASEKVYTIMYS-------CWHEKADERPTFKILLSNILDVM 279

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           ++  +E KLG+G FG    G      +VA+K L   +    E F  E  ++ KL+   LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLV 242

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           ++     E+ + I + E+M   SL  FL
Sbjct: 243 QLYAVVSEEPIYI-VTEYMSKGSLLDFL 269

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 45.5 bits (108), Expect = 8e-06
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 25/107 (23%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDLMD 196
           +G F+IKSDV+SFG+LL E  +  +  +    N   L     GY              M 
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-------------MP 401

Query: 197 -PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN 242
            P    E+ + ++ +       C+R+   +RPT   + + L +   +
Sbjct: 402 CPPECPESLHDLMCQ-------CWRKEPEERPTFEYLQAFLEDYFTS 441

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 9/103 (8%)

Query: 40  MENKLGEGGFGP---GKLLNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRI 94
           +   +G+G FG    G+  +GE VA++ +  +  +   L+ FK E+M   + +  N+V  
Sbjct: 37  IGELIGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLF 94

Query: 95  IGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           +G C+      +I      ++L   + D   K  L      +I
Sbjct: 95  MGACMSPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQI 135

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 15/93 (16%)

Query: 144 FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA 203
           FS  SDVF+ G +  E  + +    F    +  ++  +                M    +
Sbjct: 220 FSKHSDVFALGTIWYELHAREWP--FKTQPAEAIIWQMGTG-------------MKPNLS 264

Query: 204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
              + K  S++ LFC+     +RPT  +++ ML
Sbjct: 265 QIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 11/96 (11%)

Query: 36  DNFSMENKLGEGGFG-----------PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIA 84
           ++      LG+G F                L+  +V +K L        E F     +++
Sbjct: 8   EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67

Query: 85  KLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           KL   +LV   G CV     IL+ E +   SLD +L
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL 103

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 59.2 bits (144), Expect = 2e-10
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 7/107 (6%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGE-QVAVKRL-SSQSGQGLEEFKNEMMLIAKLQDIN 90
           ++  +  ++G G FG    G+L      VAVK    +       +F  E  ++ +    N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           +VR+IG C +K    ++ E +       FL       RL   T +++
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQM 218

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 25/105 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDL 194
             +G +S +SDV+SFG+LL ET S   + +   +N  T      G               
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR------------- 333

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           +  P L  +A + ++++       C+      RP+   I   L +
Sbjct: 334 LPCPELCPDAVFRLMEQ-------CWAYEPGQRPSFSTIYQELQS 371

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 13/98 (13%)

Query: 36  DNFSMENKLGEGGFG-----------PGKLLNGEQVAVKRL-SSQSGQGLEEFKNEMMLI 83
           D  ++   LGEG FG             K      VAVK L    + + L +  +EM ++
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140

Query: 84  AKLQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             +    N++ ++G C + G   +I E+    +L  +L
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 25/104 (24%)

Query: 140 LHGVFSIKSDVFSFGVLLLE--TLSSKKNAHFYNTNSLTLL--GYVIWNLWNDGSLWDLM 195
              V++ +SDV+SFGVL+ E  TL               LL  G+              M
Sbjct: 278 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR-------------M 324

Query: 196 D-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           D P   T   Y +++        C+    + RPT  ++V  L  
Sbjct: 325 DKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLDR 361

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 58.4 bits (142), Expect = 2e-10
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGE------QVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
            N  +   LGEG FG        + +       VAVK L  + S   L +  +E  ++ +
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           +   +++++ G C + G  +LI E+    SL  FL
Sbjct: 83  VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 31/111 (27%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLW 192
              +++ +SDV+SFGVLL E ++              +N   L   G+            
Sbjct: 225 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN---LLKTGHR----------- 270

Query: 193 DLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN 242
             M+ P   +E  Y ++ +       C+++    RP   +I   L   +V 
Sbjct: 271 --MERPDNCSEEMYRLMLQ-------CWKQEPDKRPVFADISKDLEKMMVK 312

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 58.4 bits (142), Expect = 3e-10
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           +  ++  +LG G FG    GK      VAVK +   S    +EF  E   + KL    LV
Sbjct: 8   EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLV 66

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           +  G C ++    ++ E++ N  L  +L
Sbjct: 67  KFYGVCSKEYPIYIVTEYISNGCLLNYL 94

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 25/105 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL----LGYVIWNLWNDGSLWDL 194
             +  +S KSDV++FG+L+ E  S  K  +   TNS  +     G+              
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHR------------- 223

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           +  P L ++  Y I+         C+ E    RPT  +++S +  
Sbjct: 224 LYRPHLASDTIYQIMYS-------CWHELPEKRPTFQQLLSSIEP 261

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 13/98 (13%)

Query: 36  DNFSMENKLGEGGFG-----------PGKLLNGEQVAVKRL-SSQSGQGLEEFKNEMMLI 83
           D  ++   LGEG FG             K      VAVK L    + + L +  +EM ++
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 84  AKLQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             +    N++ ++G C + G   +I E+    +L  +L
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 35/123 (28%)

Query: 140 LHGVFSIKSDVFSFGVLLLE--TLSSKKNAHFYNTNSLTLL--GYVIWNLWNDGSLWDLM 195
              V++ +SDV+SFGVL+ E  TL               LL  G+              M
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR-------------M 278

Query: 196 D-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI----------VNLP 244
           D P   T   Y +++        C+    + RPT  ++V  L   +          ++ P
Sbjct: 279 DKPANCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331

Query: 245 YPQ 247
             Q
Sbjct: 332 LEQ 334

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQ-VAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
            + +M++KLG G +G    G        VAVK L   + + +EEF  E  ++ +++  NL
Sbjct: 13  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 71

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           V+++G C  +    +I E M   +L  +L
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYL 100

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 45.3 bits (108), Expect = 6e-06
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 25/105 (23%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDL 194
             +  FSIKSDV++FGVLL E  +   + +     S         Y              
Sbjct: 184 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR------------- 230

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
           M+ P    E  Y +++        C++ N +DRP+  EI      
Sbjct: 231 MERPEGCPEKVYELMRA-------CWQWNPSDRPSFAEIHQAFET 268

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 58.0 bits (141), Expect = 4e-10
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 13/105 (12%)

Query: 36  DNFSMENKLGEGGFG-------PGKLLNGEQVAVKRL---SSQSGQGLEEFKNEMMLIAK 85
            +  +  KLG+G FG                VAVK L        + +++F  E+  +  
Sbjct: 18  KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLG 130
           L   NL+R+ G  +   +K+ + E  P  SL   L    ++G   
Sbjct: 78  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFL 119

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 28/106 (26%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSL 191
                FS  SD + FGV L E  +           +             ++  +  +G  
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ------------ILHKIDKEGER 243

Query: 192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS 237
             L  P    +  Y ++ +       C+     DRPT + +   L 
Sbjct: 244 --LPRPEDCPQDIYNVMVQ-------CWAHKPEDRPTFVALRDFLL 280

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 58.1 bits (141), Expect = 5e-10
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 13/98 (13%)

Query: 36  DNFSMENKLGEGGFG-----------PGKLLNGEQVAVKRL-SSQSGQGLEEFKNEMMLI 83
           D   +   LGEG FG             K     +VAVK L S  + + L +  +EM ++
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 84  AKLQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             +    N++ ++G C + G   +I E+    +L  +L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 31/120 (25%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLW 192
              +++ +SDV+SFGVLL E  +              +    L   G+            
Sbjct: 266 FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK---LLKEGHR----------- 311

Query: 193 DLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
             MD P   T   Y +++        C+    + RPT  ++V  L   +      +   +
Sbjct: 312 --MDKPSNCTNELYMMMRD-------CWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 14/99 (14%)

Query: 36  DNFSMENKLGEGGFG-------PGKLLNGEQVAVKRL--SSQSGQGLEEFKNEMMLIAKL 86
           +   +   LGEG FG         +     +VAVK +   + S + +EEF +E   +   
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF 93

Query: 87  QDINLVRIIGCCVEKGVKI-----LIYEHMPNKSLDYFL 120
              N++R++G C+E   +      +I   M    L  +L
Sbjct: 94  SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL 132

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 45.0 bits (107), Expect = 9e-06
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 29/112 (25%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLW 192
              V++ KSDV++FGV + E  +         +N   Y+     L G+            
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD---YLLHGHR----------- 267

Query: 193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP 244
            L  P    +  Y I+         C+R +  DRPT   +   L   + +LP
Sbjct: 268 -LKQPEDCLDELYEIMYS-------CWRTDPLDRPTFSVLRLQLEKLLESLP 311

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 39  SMENKLGEGGFG---PGKLLNGEQ----VAVKRL-SSQSGQGLEEFKNEMMLIAKLQDIN 90
                +G G FG    G LL+ +      AVK L        + +F  E +++      N
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87

Query: 91  LVRIIGCCVEKGVKIL-IYEHMPNKSLDYFL 120
           ++ ++G C+      L +  +M +  L  F+
Sbjct: 88  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 118

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 15/104 (14%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML 199
               F+ KSDV+SFGVLL E ++      + + N+  +  Y+       G    L+ P  
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPP-YPDVNTFDITVYL-----LQGRR--LLQPEY 256

Query: 200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL 243
             +  Y ++ +       C+   A  RP+  E+VS +S      
Sbjct: 257 CPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFSTF 293

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 57.5 bits (139), Expect = 7e-10
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 39  SMENKLGEGGFG---PGKLLNGEQ----VAVKRL-SSQSGQGLEEFKNEMMLIAKLQDIN 90
                +G G FG    G LL+ +      AVK L        + +F  E +++      N
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151

Query: 91  LVRIIGCCVEKGVKIL-IYEHMPNKSLDYFL 120
           ++ ++G C+      L +  +M +  L  F+
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFI 182

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 25/113 (22%), Positives = 40/113 (35%), Gaps = 33/113 (29%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG---YVIWNLWNDGSLWDLMD 196
               F+ KSDV+SFGVLL E ++                G   Y   ++        L+ 
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMT---------------RGAPPY--PDVNTFDITVYLLQ 311

Query: 197 ------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL 243
                 P    +  Y ++ +       C+   A  RP+  E+VS +S      
Sbjct: 312 GRRLLQPEYCPDPLYEVMLK-------CWHPKAEMRPSFSELVSRISAIFSTF 357

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 57.0 bits (138), Expect = 8e-10
 Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 15/100 (15%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ----VAVKRL--SSQSGQGLEEFKNEMMLIAKL 86
             F++   LG+G FG     +L   +     VAVK L     +   +EEF  E   + + 
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82

Query: 87  QDINLVRIIGCCVEKGVKI------LIYEHMPNKSLDYFL 120
              ++ +++G  +    K       +I   M +  L  FL
Sbjct: 83  DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL 122

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 29/118 (24%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLS-------SKKNAHFYNTNSLTLLGYVIWNLWNDGSLW 192
              ++++ SDV++FGV + E ++         +NA  YN     + G             
Sbjct: 212 ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN---YLIGGNR----------- 257

Query: 193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSA 250
            L  P    E  Y ++ +       C+  +   RP+   +   L N + +L     S 
Sbjct: 258 -LKQPPECMEEVYDLMYQ-------CWSADPKQRPSFTCLRMELENILGHLSVLSTSQ 307

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 36  DNFSMENKLGEGGFG-------PGKLLNGE--QVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
           +  S    LG G FG        G + +     VAVK L  S      E   +E+ +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 86  LQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           L + +N+V ++G C   G  ++I E+     L  FL
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 26/103 (25%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKN---AHFYNTNSLTLL--GYVIWNLWNDGSLWDL 194
            + V++ +SDV+S+G+ L E  S   +       ++    ++  G+              
Sbjct: 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR------------- 266

Query: 195 MD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
           M  P       Y I+K        C+  +   RPT  +IV ++
Sbjct: 267 MLSPEHAPAEMYDIMKT-------CWDADPLKRPTFKQIVQLI 302

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 56.9 bits (137), Expect = 2e-09
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 10/105 (9%)

Query: 40  MENKLGEGGFGP---GKLLNGE---QVAVKRL-SSQSGQGLEEFKNEMMLIAKLQDINLV 92
            + +LG G FG    G     +    VA+K L         EE   E  ++ +L +  +V
Sbjct: 340 ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 399

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           R+IG C  + + + + E      L  FL     +  +       +
Sbjct: 400 RLIGVCQAEALML-VMEMAGGGPLHKFLVG--KREEIPVSNVAEL 441

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 20/119 (16%), Positives = 35/119 (29%), Gaps = 29/119 (24%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-- 196
                FS +SDV+S+GV + E LS                G   +       +   ++  
Sbjct: 511 INFRKFSSRSDVWSYGVTMWEALS---------------YGQKPYKKMKGPEVMAFIEQG 555

Query: 197 -----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSA 250
                P       Y ++         C+     DRP  L +   +     +L    +  
Sbjct: 556 KRMECPPECPPELYALMSD-------CWIYKWEDRPDFLTVEQRMRACYYSLASKVEGG 607

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 17/120 (14%)

Query: 10  ITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGP---GKLLNGEQ----VAV 62
           + +    + K+  IP   +            +  +G+G FG    G+ ++  Q     A+
Sbjct: 3   LDSALLAEVKDVLIPHERV--------VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAI 54

Query: 63  KRL-SSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCV-EKGVKILIYEHMPNKSLDYFL 120
           K L      Q +E F  E +L+  L   N++ +IG  +  +G+  ++  +M +  L  F+
Sbjct: 55  KSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFI 114

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 17/106 (16%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-P 197
                F+ KSDV+SFGVLL E L+      + + +   L  ++       G     +  P
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTRGAPP-YRHIDPFDLTHFL-----AQG---RRLPQP 250

Query: 198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL 243
               ++ Y ++++       C+  +   RPT   +V  +   +  L
Sbjct: 251 EYCPDSLYQVMQQ-------CWEADPAVRPTFRVLVGEVEQIVSAL 289

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 55.4 bits (134), Expect = 3e-09
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 36  DNFSMENKLGEGGFG---------PGKLLNGEQVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
           D   +   LG G FG           K      VAVK L    +        +E+ ++  
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 86  L-QDINLVRIIGCCVEKGVKI-LIYEHMPNKSLDYFL 120
           +   +N+V ++G C + G  + +I E     +L  +L
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 41.9 bits (99), Expect = 9e-05
 Identities = 28/108 (25%), Positives = 39/108 (36%), Gaps = 32/108 (29%)

Query: 140 LHGVFSIKSDVFSFGVLLLE--TLSS------KKNAHFYNTNSLTLLGYVIWNLWNDGSL 191
              V++I+SDV+SFGVLL E  +L +      K +  F         G            
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR---RLKEGTR---------- 269

Query: 192 WDLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
              M  P   T   Y  +         C+    + RPT  E+V  L N
Sbjct: 270 ---MRAPDYTTPEMYQTMLD-------CWHGEPSQRPTFSELVEHLGN 307

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 55.6 bits (134), Expect = 4e-09
 Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 11/102 (10%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ----VAVKRL-SSQSGQGLEEFKNEMMLIAKLQ 87
           +   +   +GEG FG    G  ++ E     VA+K   +  S    E+F  E + + +  
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRL 129
             ++V++IG   E  V I I E      L  FL     K  L
Sbjct: 450 HPHIVKLIGVITENPVWI-IMELCTLGELRSFL--QVRKFSL 488

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 33/111 (29%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG---YVIWNLWNDGSLWDLMD- 196
              F+  SDV+ FGV + E L                 G   +    + N+  +  + + 
Sbjct: 566 FRRFTSASDVWMFGVCMWEILM---------------HGVKPF--QGVKNNDVIGRIENG 608

Query: 197 -----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN 242
                P       Y ++ +       C+  + + RP   E+ + LS  +  
Sbjct: 609 ERLPMPPNCPPTLYSLMTK-------CWAYDPSRRPRFTELKAQLSTILEE 652

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 55.0 bits (133), Expect = 4e-09
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 11/96 (11%)

Query: 36  DNFSMENKLGEGGFG---------PGKLLNGEQVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
           +N      LG G FG          GK     +VAVK L S+      E   +E+ +++ 
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 86  LQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           L    N+V ++G C   G  ++I E+     L  FL
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 32/110 (29%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLS--------SKKNAHFYNTNSLTLLGYVIWNLWNDGSL 191
              V++++SDV+S+G+LL E  S           N+ FY    L   GY           
Sbjct: 239 FDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYK---LVKDGYQ---------- 285

Query: 192 WDLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI 240
              M  P    +  Y I++        C+    T RPT  +I S L  + 
Sbjct: 286 ---MAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQA 325

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 55.0 bits (133), Expect = 5e-09
 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 11/96 (11%)

Query: 36  DNFSMENKLGEGGFG-------PGKLLNGE--QVAVKRL-SSQSGQGLEEFKNEMMLIAK 85
           +N      LG G FG        G    G   QVAVK L         E   +E+ ++ +
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 86  LQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           L    N+V ++G C   G   LI+E+     L  +L
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 32/112 (28%)

Query: 140 LHGVFSIKSDVFSFGVLLLE--TLSS------KKNAHFYNTNSLTLLGYVIWNLWNDGSL 191
             G+++IKSDV+S+G+LL E  +L          +A+FY    L   G+           
Sbjct: 247 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYK---LIQNGFK---------- 293

Query: 192 WDLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN 242
              MD P   TE  Y I++        C+  ++  RP+   + S L  ++ +
Sbjct: 294 ---MDQPFYATEEIYIIMQS-------CWAFDSRKRPSFPNLTSFLGCQLAD 335

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 54.6 bits (132), Expect = 5e-09
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGE----QVAVKRL-SSQSGQGLEEFKNEMMLIAKLQ 87
               +E  +G G  G    G+L         VA+K L +  + +   +F +E  ++ +  
Sbjct: 49  SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
             N++R+ G      + +++ E+M N SLD FL    + G+      V +
Sbjct: 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT--HDGQFTIMQLVGM 156

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 11/24 (45%), Positives = 15/24 (62%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLS 162
                FS  SDV+SFGV++ E L+
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA 249

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 54.6 bits (132), Expect = 6e-09
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 11/111 (9%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGE-----QVAVKRL-SSQSGQGLEEFKNEMMLIAKL 86
              + +  +G G FG    G L          VA+K L +  + +   +F  E  ++ + 
Sbjct: 44  SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
              N++R+ G   +    ++I E+M N +LD FL      G       V +
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFL--REKDGEFSVLQLVGM 152

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 43.5 bits (103), Expect = 3e-05
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 33/113 (29%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG---YVIWNLWNDGSLWDLM 195
             +  F+  SDV+SFG+++ E ++                G   Y  W L N   +  + 
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMT---------------YGERPY--WELSNHEVMKAIN 264

Query: 196 D------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN 242
           D      PM    A Y ++ +       C+++    RP   +IVS+L   I  
Sbjct: 265 DGFRLPTPMDCPSAIYQLMMQ-------CWQQERARRPKFADIVSILDKLIRA 310

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 10/110 (9%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQ----VAVKRL-SSQSGQGLEEFKNEMMLIAKLQ 87
            N S++  +G G FG    G+L    +    VA+K L    + +   +F  E  ++ +  
Sbjct: 45  TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD 104

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
             N++R+ G   +    +++ E+M N SLD FL    +  +      V +
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK--HDAQFTVIQLVGM 152

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 23/108 (21%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL----GYVIWNLWNDGSLWDL 194
             +  F+  SDV+S+G++L E +S  +  ++  +N   +     GY             L
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR------------L 269

Query: 195 MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN 242
             PM    A Y ++         C++++  +RP   +IVS+L   I N
Sbjct: 270 PPPMDCPAALYQLMLD-------CWQKDRNNRPKFEQIVSILDKLIRN 310

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 54.4 bits (131), Expect = 7e-09
 Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 17/111 (15%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE--MMLIAKLQDIN 90
               M  ++G+G +G    GK   GE+VAVK   +        +  E  +     ++  N
Sbjct: 37  KQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHEN 92

Query: 91  LVRIIGCCVEKGVKI----LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++  I   ++         LI ++  N SL  +L        L   + +++
Sbjct: 93  ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKL 139

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 53.8 bits (130), Expect = 9e-09
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 9/93 (9%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQ----VAVKRL-SSQSGQGLEEFKNEMMLIAKLQ 87
           +   +   +GEG FG    G  ++ E     VA+K   +  S    E+F  E + + +  
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             ++V++IG   E  V I I E      L  FL
Sbjct: 75  HPHIVKLIGVITENPVWI-IMELCTLGELRSFL 106

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 34/118 (28%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG---YVIWNLWNDGSLWDLM 195
                F+  SDV+ FGV + E L                 G   +    + N+  +  + 
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILM---------------HGVKPF--QGVKNNDVIGRIE 231

Query: 196 D------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQ 247
           +      P       Y ++ +       C+  + + RP   E+ + LS  I+     Q
Sbjct: 232 NGERLPMPPNCPPTLYSLMTK-------CWAYDPSRRPRFTELKAQLS-TILEEEKAQ 281

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 10/94 (10%)

Query: 36  DNFSMENK-LGEGGFG---PGKLLNGE---QVAVKRL--SSQSGQGLEEFKNEMMLIAKL 86
              ++E+K LG G FG    G     +    VAVK L   +      +E   E  ++ +L
Sbjct: 16  KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL 75

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
            +  +VR+IG C  +   + + E      L+ +L
Sbjct: 76  DNPYIVRMIGICEAESWML-VMEMAELGPLNKYL 108

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 23/123 (18%), Positives = 36/123 (29%), Gaps = 37/123 (30%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG---YVIWNLWNDGSLWDLM 195
             +  FS KSDV+SFGVL+ E  S                G   Y    +        L 
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFS---------------YGQKPY--RGMKGSEVTAMLE 234

Query: 196 D------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP----Y 245
                  P       Y ++         C+  +  +RP    +   L N   ++     +
Sbjct: 235 KGERMGCPAGCPREMYDLMNL-------CWTYDVENRPGFAAVELRLRNYYYDVVNEGHH 287

Query: 246 PQQ 248
              
Sbjct: 288 HHH 290

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 17/107 (15%)

Query: 40  MENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE--MMLIAKLQDINLVRI 94
           +   +G+G +G    G    GE VAVK  SS+     + +  E  +     L+  N++  
Sbjct: 12  LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGF 67

Query: 95  IGCCVEKGVKI----LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           I   +          LI  +    SL  +L        L   + +RI
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRI 110

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 10/105 (9%)

Query: 40  MENKLGEGGFG---PGKLLNGE---QVAVKRL-SSQSGQGLEEFKNEMMLIAKLQDINLV 92
            + +LG G FG    G     +    VA+K L         EE   E  ++ +L +  +V
Sbjct: 14  ADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIV 73

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           R+IG C  + + + + E      L  FL     +  +       +
Sbjct: 74  RLIGVCQAEALML-VMEMAGGGPLHKFLVG--KREEIPVSNVAEL 115

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 20/118 (16%), Positives = 35/118 (29%), Gaps = 29/118 (24%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD-- 196
                FS +SDV+S+GV + E LS                G   +       +   ++  
Sbjct: 185 INFRKFSSRSDVWSYGVTMWEALS---------------YGQKPYKKMKGPEVMAFIEQG 229

Query: 197 -----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQS 249
                P       Y ++         C+     DRP  L +   +     +L    + 
Sbjct: 230 KRMECPPECPPELYALMSD-------CWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 280

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 9/93 (9%)

Query: 36  DNFSMENKLGEGGFG---PGKLLNGEQ----VAVKRL-SSQSGQGLEEFKNEMMLIAKLQ 87
           ++  +   LGEG FG    G   N +     VAVK      +    E+F +E +++  L 
Sbjct: 12  EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD 71

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             ++V++IG   E+   I I E  P   L ++L
Sbjct: 72  HPHIVKLIGIIEEEPTWI-IMELYPYGELGHYL 103

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 44.9 bits (107), Expect = 8e-06
 Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 33/109 (30%)

Query: 139 ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG---YVIWNLWNDGSLWDLM 195
                F+  SDV+ F V + E LS                G   +  + L N   +  L 
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILS---------------FGKQPF--FWLENKDVIGVLE 228

Query: 196 D------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
                  P L     Y ++ R       C+  + +DRP   E+V  LS+
Sbjct: 229 KGDRLPKPDLCPPVLYTLMTR-------CWDYDPSDRPRFTELVCSLSD 270

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 52.5 bits (126), Expect = 3e-08
 Identities = 23/107 (21%), Positives = 45/107 (42%), Gaps = 17/107 (15%)

Query: 40  MENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNE--MMLIAKLQDINLVRI 94
           ++  +G+G FG    GK   GE+VAVK  SS+       +  E  +     L+  N++  
Sbjct: 46  LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGF 101

Query: 95  IGCCVEKGVKI----LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           I    +         L+ ++  + SL  +L    N+  +     +++
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKL 144

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 47.2 bits (112), Expect = 2e-06
 Identities = 31/180 (17%), Positives = 57/180 (31%), Gaps = 15/180 (8%)

Query: 36  DNFSMENKLGEGGFG---------PGKLLNGEQVAVKRLSSQSGQG-LEEFKNEMMLIAK 85
           D   +   LG G FG           K      VAVK L   +         +E+ ++  
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 86  LQD-INLVRIIGCCVEKGVKI-LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGV 143
           +   +N+V ++G C + G  + +I E     +L  +L    N+         R       
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 141

Query: 144 FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG---SLWDLMDPMLQ 200
                      +  + +  S  ++ F    SL+ +              +L  L+    Q
Sbjct: 142 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 201

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 28/109 (25%), Positives = 38/109 (34%), Gaps = 32/109 (29%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSS--------KKNAHFYNTNSLTLLGYVIWNLWNDGSLW 192
             V++I+SDV+SFGVLL E  S         K +  F         G             
Sbjct: 269 DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR---RLKEGTR----------- 314

Query: 193 DLMD-PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI 240
             M  P   T   Y  +         C+    + RPT  E+V  L N +
Sbjct: 315 --MRAPDYTTPEMYQTMLD-------CWHGEPSQRPTFSELVEHLGNLL 354

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 44  LGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCV 99
           LG+G +G       L N  ++A+K +  +  +  +    E+ L   L+  N+V+ +G   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89

Query: 100 EKGVKILIY-EHMPNKSL 116
           E G  I I+ E +P  SL
Sbjct: 90  ENG-FIKIFMEQVPGGSL 106

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 45.4 bits (108), Expect = 6e-06
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 35  TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN 90
             +F     LG+G FG        L+    A+K++     + L    +E+ML+A L    
Sbjct: 5   ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEK-LSTILSEVMLLASLNHQY 63

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYF 119
           +VR     +E+   +     +  KS  + 
Sbjct: 64  VVRYYAAWLERRNFVKPMTAVKKKSTLFI 92

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 8/92 (8%)

Query: 37  NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           ++    KLGEGGF    L     +G   A+KR+     Q  EE + E  +       N++
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89

Query: 93  RIIGCCVEKGVK----ILIYEHMPNKSLDYFL 120
           R++  C+ +        L+       +L   +
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI 121

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 8/90 (8%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
            +F     +G GGFG        ++G+   +KR+   +    E+ + E+  +AKL  +N+
Sbjct: 11  MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNI 66

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFLF 121
           V   GC               ++S    LF
Sbjct: 67  VHYNGCWDGFDYDPETSSKNSSRSKTKCLF 96

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 9/91 (9%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLS-SQSGQGLEEFKNEMMLIAKLQDIN 90
            +F     LG GGFG        ++    A+KR+         E+   E+  +AKL+   
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYFLF 121
           +VR     +EK       E +   S   +L+
Sbjct: 65  IVRYFNAWLEKN----TTEKLQPSSPKVYLY 91

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 7/80 (8%)

Query: 37  NFSMENKLGEGGFGP---GKLLNGEQVAVKR--LSSQSGQGLEEFKNEMMLIAKLQDINL 91
            +S+  ++G GG            +  A+K   L     Q L+ ++NE+  + KLQ  + 
Sbjct: 29  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88

Query: 92  --VRIIGCCVEKGVKILIYE 109
             +R+    +      ++ E
Sbjct: 89  KIIRLYDYEITDQYIYMVME 108

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 40.1 bits (94), Expect = 3e-04
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 12/105 (11%)

Query: 37  NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQD-INL 91
              +   L EGGF          +G + A+KRL S   +       E+  + KL    N+
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88

Query: 92  VRIIGCCV-------EKGVKILIYEHMPNKSLDYFLFDPANKGRL 129
           V+                 + L+   +    L  FL    ++G L
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPL 133

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVK--RLSSQSGQGLEEFKNEMMLIAKLQDI 89
           + +    K+GEG FG   L     +G Q  +K   +S  S +  EE + E+ ++A ++  
Sbjct: 24  EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHP 83

Query: 90  NLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
           N+V+      E G   ++ ++     L   +
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRI 114

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 35  TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN 90
            D++ +  +LG G FG          G   A K + +      E  + E+  ++ L+   
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215

Query: 91  LVRIIGCCVEKGVKILIYE 109
           LV +     +    ++IYE
Sbjct: 216 LVNLHDAFEDDNEMVMIYE 234

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 13/67 (19%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 35 TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN 90
             ++   K+G+G  G       +  G++VA+++++ Q     E   NE++++ + ++ N
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78

Query: 91 LVRIIGC 97
          +V  +  
Sbjct: 79 IVNYLDS 85

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 7/101 (6%)

Query: 27  SLASISAATDNFSMENKLGEGGFGP----GKLLNGEQVAVKR--LSSQSGQGLEEFKNEM 80
           ++   S  T  F    K+G G FG      K L+G   A+KR           +    E+
Sbjct: 2   AMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREV 61

Query: 81  MLIAKLQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
              A L    ++VR      E    ++  E+    SL   +
Sbjct: 62  YAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI 102

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 10/88 (11%)

Query: 43  KLGEGGFGP---GK-LLNGEQVAVK--RLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIG 96
           ++G G F     G       +VA    +    +    + FK E  ++  LQ  N+VR   
Sbjct: 33  EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92

Query: 97  CCV----EKGVKILIYEHMPNKSLDYFL 120
                   K   +L+ E M + +L  +L
Sbjct: 93  SWESTVKGKKCIVLVTELMTSGTLKTYL 120

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 40.0 bits (93), Expect = 5e-04
 Identities = 12/108 (11%), Positives = 29/108 (26%), Gaps = 13/108 (12%)

Query: 30  SISAATDNFSMENKLGEGGFGP---------GKLLNGEQVAVKRLSSQSGQGLEEFKNEM 80
                +    + + LGEG F               N ++  +K     +          M
Sbjct: 59  EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM 118

Query: 81  MLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGR 128
             +        ++     + +   +L+ E     +    L +  N  +
Sbjct: 119 ERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGT----LLNAINLYK 162

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 16/80 (20%), Positives = 33/80 (41%), Gaps = 7/80 (8%)

Query: 37  NFSMENKLGEGGFGP---GKLLNGEQVAVKR--LSSQSGQGLEEFKNEMMLIAKLQDINL 91
            +S+  ++G GG            +  A+K   L     Q L+ ++NE+  + KLQ  + 
Sbjct: 57  IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116

Query: 92  --VRIIGCCVEKGVKILIYE 109
             +R+    +      ++ E
Sbjct: 117 KIIRLYDYEITDQYIYMVME 136

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 4/87 (4%)

Query: 35  TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN 90
            + + +  +LG+G FG          G   A K + ++S + LE++  E+ ++A      
Sbjct: 18  NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLD 117
           +V+++G     G   ++ E  P  ++D
Sbjct: 78  IVKLLGAYYHDGKLWIMIEFCPGGAVD 104

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 6/64 (9%)

Query: 37 NFSMENKLGEGGFGP---GKLLNGEQVAVKR--LSSQSGQGLEEFKNEMMLIAKLQDINL 91
           +S+  ++G GG            +  A+K   L     Q L+ ++NE+  + KLQ  + 
Sbjct: 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS- 68

Query: 92 VRII 95
           +II
Sbjct: 69 DKII 72

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 35  TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN 90
                   K+GEG  G      +  +G QVAVK +  +  Q  E   NE++++   Q  N
Sbjct: 44  RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 91  LVRIIGC 97
           +V +   
Sbjct: 104 VVEMYKS 110

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	253
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.98
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.97
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.96
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.96
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.96
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.95
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.95
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.95
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.95
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.95
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.95
3uqc_A	286	Probable conserved transmembrane protein; structur	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.95
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.95
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.95
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.95
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.95
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.95
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.95
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.95
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.95
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.95
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.94
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.94
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.94
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.94
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.94
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.94
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.94
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.94
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.94
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.94
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.94
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.94
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.94
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.94
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.94
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.94
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.94
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.94
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.94
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.94
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.94
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.94
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.94
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.94
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.94
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.94
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.94
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.94
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.94
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.94
3niz_A	311	Rhodanese family protein; structural genomics, str	99.94
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.94
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.94
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.94
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.94
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.94
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.94
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.93
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.93
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.93
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.93
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.93
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.93
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.93
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.93
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.93
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.93
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.93
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.93
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.93
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.93
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.93
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.93
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.93
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.93
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.93
3bhy_A	283	Death-associated protein kinase 3; death associate	99.93
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.93
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.93
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.93
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.93
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.93
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.93
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.93
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.93
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.93
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.93
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.93
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.93
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.93
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.93
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.93
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.93
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.93
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.93
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.93
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.93
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.93
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.93
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.93
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.93
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.92
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.92
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.92
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.92
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.92
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.92
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.92
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.92
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.92
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.92
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.92
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.92
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.92
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.92
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.92
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.92
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.92
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.92
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.92
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.92
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.92
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.92
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.92
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.92
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.92
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.92
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.92
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.92
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.91
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.91
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.91
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.91
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.91
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.91
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.91
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.91
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.91
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.91
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.91
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.91
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.91
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.91
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.91
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.91
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.91
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.9
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.9
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.9
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.9
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.9
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.9
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.9
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.9
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.9
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.89
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.89
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.89
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.89
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.89
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.89
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.89
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.89
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.89
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.88
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.88
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.87
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.76
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.68
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.28
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.89
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.74
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.16
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.01
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.68
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.72
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.48
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	95.64
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	93.88
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	93.12
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	91.53
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	91.13
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	90.55
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	90.14
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	88.81
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	86.92
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	86.49
3ats_A	357	Putative uncharacterized protein; hypothetical pro	83.9
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	82.72

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.8e-40  Score=267.77  Aligned_cols=193  Identities=25%  Similarity=0.387  Sum_probs=147.3

Q ss_pred             hcCccccCccccccccceEee---------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      .++|.+.+.||+|+||+|++.         +++.||||+++..+....+.|.+|+.+|++++|||||+++|+|.+.+.++
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~  119 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL  119 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            457888899999999997763         47789999998777677788999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCc------------CCCCccceeee------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANK------------GRLGWGTRVRI------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~------------~~~~~~~~~~i------------------------------------  137 (253)
                      ||||||++|+|.+++++....            ..++|.....+                                    
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki  199 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI  199 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEE
Confidence            999999999999998653221            12333333322                                    


Q ss_pred             -------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhh
Q 043709          138 -------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNL  185 (253)
Q Consensus       138 -------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~  185 (253)
                                                     .+....|+.++|||||||++|||+| |+.||.....  .++...+    
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~i----  273 (329)
T 4aoj_A          200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAIDCI----  273 (329)
T ss_dssp             CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--HHHHHHH----
T ss_pred             cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--HHHHHHH----
Confidence                                           2344568999999999999999999 8899864332  2222222    


Q ss_pred             hcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCC
Q 043709          186 WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL  243 (253)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~  243 (253)
                      .. +.         +...+..++..+.+|+.+||+.||++|||+++|++.|+.+.+..
T Consensus       274 ~~-g~---------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          274 TQ-GR---------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             HH-TC---------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             Hc-CC---------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence            11 11         11122234467888999999999999999999999999988653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=2.2e-40  Score=266.89  Aligned_cols=194  Identities=26%  Similarity=0.386  Sum_probs=146.1

Q ss_pred             hcCccccCccccccccceEee---------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      .++|.+.+.||+|+||+|++.         ++..||||+++..+....+.|.+|+.+|++++|||||+++|+|.+++.++
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~   91 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI   91 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            467899999999999997652         46789999998776667788999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCC----------CcCCCCccceeee--------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPA----------NKGRLGWGTRVRI--------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~i--------------------------------------  137 (253)
                      ||||||++|+|.++|+...          ....+++.....+                                      
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~D  171 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGD  171 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECC
Confidence            9999999999999995422          1123444433333                                      


Q ss_pred             -----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhc
Q 043709          138 -----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWN  187 (253)
Q Consensus       138 -----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~  187 (253)
                                                   .+....|+.++|||||||++|||+| |+.||.....  .++...+.     
T Consensus       172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~~i~-----  244 (299)
T 4asz_A          172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIECIT-----  244 (299)
T ss_dssp             CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHHH-----
T ss_pred             cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH-----
Confidence                                         2344668999999999999999998 7889864332  22222221     


Q ss_pred             CCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          188 DGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      .+..         ...+..++..+.+|+.+||+.||++|||+++|++.|+++....|
T Consensus       245 ~~~~---------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p  292 (299)
T 4asz_A          245 QGRV---------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP  292 (299)
T ss_dssp             HTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             cCCC---------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence            1111         11122345678889999999999999999999999999876543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.9e-39  Score=260.58  Aligned_cols=190  Identities=25%  Similarity=0.325  Sum_probs=140.4

Q ss_pred             hcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .+++++.+.||+|+||+|++.         +++.||||+++.. .....+.|.+|+.+|++++|||||+++|+|.+++.+
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  104 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL  104 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence            356778899999999997652         4678999999754 345567899999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee----------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI----------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i----------------------------------  137 (253)
                      +||||||++|+|.++|+.....             ..++|.....+                                  
T Consensus       105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~  184 (308)
T 4gt4_A          105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNV  184 (308)
T ss_dssp             EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCE
T ss_pred             EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCE
Confidence            9999999999999999643221             11222222222                                  


Q ss_pred             ---------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhH
Q 043709          138 ---------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIW  183 (253)
Q Consensus       138 ---------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~  183 (253)
                                                       .+..+.|+.++|||||||++|||+| |..||.....  .++...+  
T Consensus       185 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~~i--  260 (308)
T 4gt4_A          185 KISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVEMI--  260 (308)
T ss_dssp             EECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHHHH--
T ss_pred             EECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH--
Confidence                                             2344668999999999999999998 7888864332  2222222  


Q ss_pred             hhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          184 NLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                         ..+..         .+.+..++..+.+|+.+||+.||++|||+++|++.|+...
T Consensus       261 ---~~~~~---------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          261 ---RNRQV---------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             ---HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             ---HcCCC---------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence               11111         1122234567888999999999999999999999998753

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.9e-38  Score=254.74  Aligned_cols=203  Identities=20%  Similarity=0.275  Sum_probs=146.6

Q ss_pred             HHHHHhcCccccCccccccccceEee-CCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL-NGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .|+...+++++.+.||+|+||+|++. ....||||+++..  +.+..+.|.+|+.+|++++|||||+++|++.. +.++|
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i  108 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI  108 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence            35566678999999999999997773 3557999999754  34556789999999999999999999998864 56899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |||||++|+|.++|+...  ..+++.....+                                                 
T Consensus       109 VmEy~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~  186 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS  186 (307)
T ss_dssp             EEECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----
T ss_pred             EEEcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCC
Confidence            999999999999995432  12333333222                                                 


Q ss_pred             ------------------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ------------------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ------------------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                        .+   ..+.|+.++|||||||++|||+||+.||....... .+...+ .    .+.    ..
T Consensus       187 ~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~-~----~~~----~~  256 (307)
T 3omv_A          187 GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMV-G----RGY----AS  256 (307)
T ss_dssp             -------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHH-H----TTC----CC
T ss_pred             cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHH-h----cCC----CC
Confidence                              11   13458899999999999999999999986433211 111111 1    110    01


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCC
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYP  246 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~  246 (253)
                      +.. ......++..+.+++.+||+.||++|||+++|++.|+.+...+|..
T Consensus       257 p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk~  305 (307)
T 3omv_A          257 PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKI  305 (307)
T ss_dssp             CCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC-
T ss_pred             CCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCCC
Confidence            111 1122234567888999999999999999999999999888777643

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=6e-38  Score=257.88  Aligned_cols=202  Identities=23%  Similarity=0.354  Sum_probs=147.7

Q ss_pred             ccHHHHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhcc-CCCcceE
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQ-DINLVRI   94 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-H~nIv~~   94 (253)
                      +..++|..+.++|++.+.||+|+||+|++.         .++.||||.+... .....+.|.+|+.+|+++. |||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            456788889999999999999999997652         2357999999765 3445677999999999996 4999999


Q ss_pred             eEEEEec-CeeEEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee-----------------------
Q 043709           95 IGCCVEK-GVKILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI-----------------------  137 (253)
Q Consensus        95 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i-----------------------  137 (253)
                      +|+|... +.++||||||++|+|.++|+.....             ..+++.....+                       
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~  213 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAA  213 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCc
Confidence            9999765 5689999999999999998642211             11222222111                       


Q ss_pred             --------------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCC
Q 043709          138 --------------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNT  172 (253)
Q Consensus       138 --------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~  172 (253)
                                                                  .+....|+.++|||||||++|||+| |..||.....
T Consensus       214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence                                                        2344568999999999999999998 8889865433


Q ss_pred             CCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          173 NSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      .. .+...+     ..+         .+...+..++..+.+++.+||+.||++|||+++|++.|+.+++.
T Consensus       294 ~~-~~~~~i-----~~g---------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          294 DE-EFCRRL-----KEG---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             SH-HHHHHH-----HHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HH-HHHHHH-----HcC---------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            21 122111     111         11112223345788899999999999999999999999988743

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=7.5e-37  Score=249.96  Aligned_cols=182  Identities=20%  Similarity=0.259  Sum_probs=131.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++++.||+|+||+|++    .+++.||||++...  .....+.+.+|+.+|+.++|||||++++++.+.+.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5899999999999999665    56899999999754  34456789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      ||+||+|.++|...... .+.......+                                                    
T Consensus       104 y~~gg~L~~~i~~~~~~-~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  182 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGV-LFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA  182 (350)
T ss_dssp             CCTTCBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence            99999999998532211 1121111111                                                    


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   .+.+..|+.++|||||||++|||++|..||.....  ..+...+    . .+...         ...
T Consensus       183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i----~-~~~~~---------~~~  246 (350)
T 4b9d_A          183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM--KNLVLKI----I-SGSFP---------PVS  246 (350)
T ss_dssp             HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH----H-HTCCC---------CCC
T ss_pred             cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHH----H-cCCCC---------CCC
Confidence                         33456799999999999999999999999974432  1222111    1 11111         111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+..+.+|+.+||+.||++|||++++++
T Consensus       247 ~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          247 LHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            233467888999999999999999999985

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2.2e-36  Score=246.77  Aligned_cols=182  Identities=15%  Similarity=0.176  Sum_probs=137.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .+.|++.+.||+|+||+|++    .+|+.||||++........+.+.+|+.+|+.++|||||++++++.+.+.+||||||
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            35699999999999999665    57899999999866556667799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      |++|+|.+++.+..    +.+.....+                                                     
T Consensus       153 ~~gg~L~~~l~~~~----l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  228 (346)
T 4fih_A          153 LEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK  228 (346)
T ss_dssp             CTTEEHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred             CCCCcHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence            99999999883211    111111100                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ++....|+.++|||||||++|||++|..||.....  ......+..     ..     .+.  .....
T Consensus       229 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~-----~~-----~~~--~~~~~  294 (346)
T 4fih_A          229 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRD-----NL-----PPR--LKNLH  294 (346)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHH-----SS-----CCC--CSCGG
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHc-----CC-----CCC--CCccc
Confidence                        33456799999999999999999999999864322  112221100     00     001  11122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .++..+.+|+.+||..||++|||++|+++
T Consensus       295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          295 KVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            34567888999999999999999999986

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.7e-36  Score=243.67  Aligned_cols=195  Identities=15%  Similarity=0.157  Sum_probs=139.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      +.|++.+.||+|+||.|++    .+++.||||+++....     ..+|+.+|+.++|||||++++++.+++.+|||||||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  132 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL  132 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            4688888999999999665    5689999999975422     247999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCC-------------------------------C------------cCCCCccceeee-----------
Q 043709          112 PNKSLDYFLFDPA-------------------------------N------------KGRLGWGTRVRI-----------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~-------------------------------~------------~~~~~~~~~~~i-----------  137 (253)
                      +||+|.+++++..                               +            .+..++.....+           
T Consensus       133 ~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~  212 (336)
T 4g3f_A          133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT  212 (336)
T ss_dssp             TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----------
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceec
Confidence            9999999882211                               0            000111100000           


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ++.+..|+.++|||||||++|||++|..||.......  +...+..   .....         ...
T Consensus       213 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~~---~~~~~---------~~~  278 (336)
T 4g3f_A          213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCLKIAS---EPPPI---------REI  278 (336)
T ss_dssp             -CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHHHHHH---SCCGG---------GGS
T ss_pred             CCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHc---CCCCc---------hhc
Confidence                          2344568999999999999999999999997543322  2222101   00000         111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCC
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQS  249 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~  249 (253)
                      +..++..+.+++.+||+.||++|||+.||++.|...+.....-.+|
T Consensus       279 ~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hP  324 (336)
T 4g3f_A          279 PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSP  324 (336)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSC
T ss_pred             CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCC
Confidence            2234567888999999999999999999999998887655544444

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.5e-35  Score=247.61  Aligned_cols=182  Identities=16%  Similarity=0.206  Sum_probs=136.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .+.|++.+.||+|+||.|++    .+|+.||||++........+.+.+|+.+|+.++|||||++++++.+.+.+||||||
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            45699999999999999665    57899999999876666667899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCcccee------------------------------------ee-----------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI-----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i-----------------  137 (253)
                      |.||+|.+++....    +......                                    .+                 
T Consensus       230 ~~gG~L~~~i~~~~----l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  305 (423)
T 4fie_A          230 LEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK  305 (423)
T ss_dssp             CTTEEHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred             CCCCcHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence            99999999883211    1111000                                    00                 


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ++....|+.++|||||||++|||++|..||.....  ......+    .. ..     .+..  ....
T Consensus       306 ~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i----~~-~~-----~~~~--~~~~  371 (423)
T 4fie_A          306 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMI----RD-NL-----PPRL--KNLH  371 (423)
T ss_dssp             CCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHH----HH-SC-----CCCC--SCTT
T ss_pred             ccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHH----Hc-CC-----CCCC--cccc
Confidence                        33456799999999999999999999999864322  1122111    00 00     0111  1112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .++..+.+|+.+||..||++|||++|+++
T Consensus       372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          372 KVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            34467888999999999999999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.8e-35  Score=235.63  Aligned_cols=179  Identities=20%  Similarity=0.254  Sum_probs=127.0

Q ss_pred             cccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe----cCeeEEEE
Q 043709           39 SMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE----KGVKILIY  108 (253)
Q Consensus        39 ~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~----~~~~~lv~  108 (253)
                      ++.+.||+|+||.|++    .++..||+|++...  .....+.|.+|+.+|+.++|||||++++++.+    .+.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            5667899999999665    56889999999754  34456789999999999999999999999865    35689999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccc---------------------------------------eeee------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGT---------------------------------------RVRI------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~---------------------------------------~~~i------------  137 (253)
                      |||++|+|.+++.+..   .+++..                                       .+.+            
T Consensus       109 Ey~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~  185 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS  185 (290)
T ss_dssp             ECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred             eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence            9999999999883211   000000                                       0111            


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ....+.|+.++|||||||++|||+||..||...... ..+...+     ..+..+.        ..
T Consensus       186 ~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~-~~~~~~i-----~~~~~~~--------~~  251 (290)
T 3fpq_A          186 FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNA-AQIYRRV-----TSGVKPA--------SF  251 (290)
T ss_dssp             SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH-HHHHHHH-----TTTCCCG--------GG
T ss_pred             ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH-HHHHHHH-----HcCCCCC--------CC
Confidence                          223456999999999999999999999998643221 1111111     1111111        11


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+..+.+++.+||+.||++|||++++++
T Consensus       252 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1122346788999999999999999999985

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=2.4e-36  Score=243.16  Aligned_cols=178  Identities=13%  Similarity=0.109  Sum_probs=133.6

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++++.||+|+||+|++    .+++.||||++.+.   .....+.+.+|+.+|+.++|||||++++++.+++.+||||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            5799999999999999655    57899999999754   3455678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      |||+||+|.+++.+..   .++......+                                                   
T Consensus       112 Ey~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence            9999999999883211   1111100000                                                   


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ++.+..|+.++||||+||++|||++|..||.....  ..+...+..     ...          
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~-----~~~----------  251 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--GLIFAKIIK-----LEY----------  251 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH-----TCC----------
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHc-----CCC----------
Confidence                            33456689999999999999999999999964322  222222211     110          


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      ..+...+..+.+|+.+||..||++|||++|++
T Consensus       252 ~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          252 DFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            11122345688899999999999999999864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=3.2e-35  Score=237.89  Aligned_cols=197  Identities=19%  Similarity=0.199  Sum_probs=132.9

Q ss_pred             cCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecC----eeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG----VKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~----~~~lv~e  109 (253)
                      ++|.+.+.||+|+||+|++  .+|+.||||+++... .....+..|+..+..++|||||+++|++..++    .++||||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            5688899999999999665  679999999997532 11122345666667889999999999998764    5899999


Q ss_pred             eCCCCChhhhccCCCCcCCCCcccee------------------------ee----------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRV------------------------RI----------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------~i----------------------------  137 (253)
                      ||++|+|.++++...    ++|....                        .+                            
T Consensus        82 y~~~gsL~~~l~~~~----l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  157 (303)
T 3hmm_A           82 YHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  157 (303)
T ss_dssp             CCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCCCCcHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence            999999999884321    1111100                        01                            


Q ss_pred             -------------------------ee------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcch---------
Q 043709          138 -------------------------YA------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL---------  177 (253)
Q Consensus       138 -------------------------~~------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~---------  177 (253)
                                               .+      .+..|+.++|||||||++|||+||..|+..........         
T Consensus       158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~  237 (303)
T 3hmm_A          158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS  237 (303)
T ss_dssp             EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence                                     01      11246779999999999999999988765433221111         


Q ss_pred             hhhhhHhhhcCCCccccccccCCCC-CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          178 LGYVIWNLWNDGSLWDLMDPMLQTE-ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      .... ........    .++.+... ...+.+..+.+|+.+||+.||++||||.+|++.|+.+.+.
T Consensus       238 ~~~~-~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          238 VEEM-RKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHH-HHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHH-HHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            0111 11111111    11222111 1235667888999999999999999999999999988754

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.2e-34  Score=228.59  Aligned_cols=181  Identities=18%  Similarity=0.252  Sum_probs=127.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.|++    .+++.||||+++..   .....+.+.+|+.+|+.++|||||++++++.+.+.+|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            5899999999999999665    56899999999754   3344678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||| +|+|.+++.+..   .++......+                                                   
T Consensus        93 Ey~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~  168 (275)
T 3hyh_A           93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL  168 (275)
T ss_dssp             ECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------
T ss_pred             eCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCcc
Confidence            999 579988873321   1111111111                                                   


Q ss_pred             -------------eeecCcc-ccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVF-SIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~-~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   .+.+..| +.++||||+||++|||++|..||.....  ..+...+    . .+..          ..
T Consensus       169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--~~~~~~i----~-~~~~----------~~  231 (275)
T 3hyh_A          169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNI----S-NGVY----------TL  231 (275)
T ss_dssp             ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-HTCC----------CC
T ss_pred             CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----H-cCCC----------CC
Confidence                         2233444 6799999999999999999999964321  2222221    1 0100          01


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHh
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLS  237 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~  237 (253)
                      +...+..+.+++.+||+.||++|||++|+++  +++
T Consensus       232 p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k  267 (275)
T 3hyh_A          232 PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK  267 (275)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHH
T ss_pred             CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccc
Confidence            1123456788999999999999999999996  454

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=9e-35  Score=233.86  Aligned_cols=179  Identities=18%  Similarity=0.149  Sum_probs=126.5

Q ss_pred             cCccccCccccccccceEe-------eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ++|++++.||+|+||+|++       .+++.||||+++..  .......+.+|+.+|+.++|||||++++++.+++.+|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            5799999999999999765       25788999999754  23344578899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |||||+||+|.+++.+..   .++......+                                                 
T Consensus       104 vmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             EECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred             EEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence            999999999999883211   1111111100                                                 


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      .+....|+.++||||+||++|||++|..||.....  .++...+    .. ...          
T Consensus       181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i----~~-~~~----------  243 (304)
T 3ubd_A          181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETMTMI----LK-AKL----------  243 (304)
T ss_dssp             CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH-CCC----------
T ss_pred             ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHHHHH----Hc-CCC----------
Confidence                            33456799999999999999999999999974332  2222222    10 100          


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCH-----HHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTM-----LEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~-----~~il~  234 (253)
                      ..+..++..+.+|+.+||+.||++|||+     +|+++
T Consensus       244 ~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          244 GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            1112234678889999999999999984     67764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4e-33  Score=227.73  Aligned_cols=217  Identities=30%  Similarity=0.502  Sum_probs=167.4

Q ss_pred             cccHHHHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec
Q 043709           25 FFSLASISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        25 ~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      .+++.++...+++|++.+.||+|+||.+++   .+++.||||++........+.+.+|+.+++.++||||+++++++...
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            344555666778999999999999999665   45889999999876666778899999999999999999999999999


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCc-CCCCccceeee-------------------------------------------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANK-GRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~-~~~~~~~~~~i-------------------------------------------  137 (253)
                      +..++||||+++|+|.+++...... ..+.+.....+                                           
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~  187 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK  187 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred             CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccc
Confidence            9999999999999999998543211 11222211111                                           


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcc-hhhhhhHhhhcCCCcc
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLT-LLGYVIWNLWNDGSLW  192 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~  192 (253)
                                              ......++.++|||||||++|||++|+.||......... ...+. ......+...
T Consensus       188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~  266 (321)
T 2qkw_B          188 KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA-VESHNNGQLE  266 (321)
T ss_dssp             ECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHT-HHHHTTTCCC
T ss_pred             ccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHh-hhccccccHH
Confidence                                    112345778999999999999999999998765554322 22222 3344455566


Q ss_pred             ccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      ...++..........+..+.+++.+||+.||++|||+.++++.|+.+++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            66777777777788899999999999999999999999999999988754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.98  E-value=5.8e-34  Score=229.66  Aligned_cols=181  Identities=18%  Similarity=0.195  Sum_probs=124.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC--------
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG--------  102 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~--------  102 (253)
                      ++|++++.||+|+||.|++    .+++.||||+++.. .....+.+.+|+.+|+.++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4699999999999999665    56899999999754 3344577999999999999999999999997654        


Q ss_pred             ----eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------
Q 043709          103 ----VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------  137 (253)
Q Consensus       103 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------  137 (253)
                          .+|++||||.+|+|.+++..........+.....+                                         
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl  164 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL  164 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence                37999999999999999854332221111111111                                         


Q ss_pred             ------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhh
Q 043709          138 ------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYV  181 (253)
Q Consensus       138 ------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~  181 (253)
                                                          .+.+..|+.++|||||||++|||++   ||....    +.....
T Consensus       165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~~~~  237 (299)
T 4g31_A          165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERVRTL  237 (299)
T ss_dssp             C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHHHHH
T ss_pred             ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHHHHH
Confidence                                                1233568999999999999999996   654211    111111


Q ss_pred             hHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          182 IWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       ... .....+         .........+.+++.+||+.||.+|||+.++++
T Consensus       238 -~~~-~~~~~p---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          238 -TDV-RNLKFP---------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             -HHH-HTTCCC---------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -HHH-hcCCCC---------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             111 111111         111223345678899999999999999999986

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.97  E-value=2.1e-32  Score=223.83  Aligned_cols=224  Identities=32%  Similarity=0.493  Sum_probs=168.3

Q ss_pred             cCCCCCCcccccHHHHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCc
Q 043709           16 GKSKESCIPFFSLASISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINL   91 (253)
Q Consensus        16 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nI   91 (253)
                      ........+.|++.++....++|++.+.||+|+||.+++   .+++.||||++.... ......+.+|+.+++.++||||
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i   89 (326)
T 3uim_A           10 PEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL   89 (326)
T ss_dssp             -----CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB
T ss_pred             cccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc
Confidence            334455678899999999999999999999999999665   458899999997652 2333478999999999999999


Q ss_pred             ceEeEEEEecCeeEEEEeeCCCCChhhhccCCCCcC-CCCcccee-------------------ee--------------
Q 043709           92 VRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKG-RLGWGTRV-------------------RI--------------  137 (253)
Q Consensus        92 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~~~~~~-------------------~i--------------  137 (253)
                      +++++++.+.+..++||||+.+|+|.+++....... .+.+....                   .+              
T Consensus        90 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~  169 (326)
T 3uim_A           90 LRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDE  169 (326)
T ss_dssp             CCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECT
T ss_pred             cceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECC
Confidence            999999999999999999999999999886432211 11111110                   01              


Q ss_pred             ------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC---Ccchh
Q 043709          138 ------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN---SLTLL  178 (253)
Q Consensus       138 ------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~---~~~~~  178 (253)
                                                          ......++.++|||||||++|||++|..||......   .....
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  249 (326)
T 3uim_A          170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL  249 (326)
T ss_dssp             TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHH
T ss_pred             CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHH
Confidence                                                112344678999999999999999999998643211   22222


Q ss_pred             hhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          179 GYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      .+. .............+...........+..+.+++.+||+.||.+|||+++|++.|++..
T Consensus       250 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          250 DWV-KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             HHH-TTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             HHH-HHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            222 4444555666777777777788888999999999999999999999999999998754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.97  E-value=2e-31  Score=232.51  Aligned_cols=186  Identities=20%  Similarity=0.207  Sum_probs=136.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      ++|++.+.||+|+||.+++    .+|+.||+|++........+.+.+|+.+|+.++|||||++++++.+.+.++||||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            5799999999999999654    579999999998765566678999999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCc--------------------------------CCCCcc----ceeee------------------
Q 043709          112 PNKSLDYFLFDPANK--------------------------------GRLGWG----TRVRI------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~--------------------------------~~~~~~----~~~~i------------------  137 (253)
                      .||+|.+++......                                ..+...    -.+.+                  
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~  316 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVT  316 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEE
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeee
Confidence            999999887432110                                000000    00111                  


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                                ++.+..|+.++||||+||++|||++|..||.....  ......+    . ....      .........+
T Consensus       317 ~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~~~~i----~-~~~~------~~~~~~~~~~  383 (573)
T 3uto_A          317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNV----K-SCDW------NMDDSAFSGI  383 (573)
T ss_dssp             CSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH----H-TTCC------CCCSGGGTTS
T ss_pred             EECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHH----H-hCCC------CCCcccccCC
Confidence                      23445688999999999999999999999864432  1222111    1 0000      0111111233


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +..+.+|+.+||..||.+|||++|+++
T Consensus       384 s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          384 SEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            467888999999999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.97  E-value=5.3e-30  Score=207.83  Aligned_cols=217  Identities=29%  Similarity=0.427  Sum_probs=159.1

Q ss_pred             CCcccccHHHHHHHhcCcccc------CccccccccceEe--eCCCEEEEEEeccc----ccccHHHHHHHHHHHHhccC
Q 043709           21 SCIPFFSLASISAATDNFSME------NKLGEGGFGPGKL--LNGEQVAVKRLSSQ----SGQGLEEFKNEMMLIAKLQD   88 (253)
Q Consensus        21 ~~~~~~~~~~l~~~~~~~~~~------~~ig~G~fg~~~~--~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H   88 (253)
                      .....|++.++...+++|...      +.||+|+||.+++  .+++.||||++...    .....+.+.+|+.+++.++|
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            356789999999999998877      8899999999665  57889999999753    23446789999999999999


Q ss_pred             CCcceEeEEEEecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------
Q 043709           89 INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------  137 (253)
Q Consensus        89 ~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------  137 (253)
                      |||+++++++.+.+..+++|||+++|+|.+++........+++.....+                               
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~  169 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA  169 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC
Confidence            9999999999999999999999999999998853222222222221111                               


Q ss_pred             -----------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh
Q 043709          138 -----------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI  182 (253)
Q Consensus       138 -----------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~  182 (253)
                                                         ....+.++.++||||||+++|+|++|..||.......  ....+.
T Consensus       170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~  247 (307)
T 2nru_A          170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ--LLLDIK  247 (307)
T ss_dssp             CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS--BTTHHH
T ss_pred             CcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchH--HHHHHH
Confidence                                               0011235778999999999999999999987554332  111111


Q ss_pred             Hhhh-cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          183 WNLW-NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       183 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      .... ....+....+... .......+..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          248 EEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             HHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            1111 1222223333322 3345667788999999999999999999999999999875

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=9.7e-32  Score=218.44  Aligned_cols=209  Identities=22%  Similarity=0.297  Sum_probs=143.9

Q ss_pred             cccHHHHHHHhcCccccCccccccccceEe--eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           25 FFSLASISAATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        25 ~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      .++..++....++|++.+.||+|+||.+++  .+++.||||++...  .....+.+.+|+.+++.++||||+++++++.+
T Consensus        26 ~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  105 (309)
T 3p86_A           26 AMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ  105 (309)
T ss_dssp             ------CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CCCcccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence            345556666778999999999999999665  57889999999755  33445679999999999999999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccce--------------------------------------eee-----
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTR--------------------------------------VRI-----  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~--------------------------------------~~i-----  137 (253)
                      .+..++||||+.+|+|.+++........+++...                                      ..+     
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~  185 (309)
T 3p86_A          106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL  185 (309)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred             CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence            9999999999999999998854221100111100                                      000     


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                              ......++.++|||||||++|||++|..||......  ......    ....    
T Consensus       186 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~----~~~~----  255 (309)
T 3p86_A          186 SRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAV----GFKC----  255 (309)
T ss_dssp             ----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHH----HHSC----
T ss_pred             CccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH----HhcC----
Confidence                                    122344778999999999999999999998644321  111111    0000    


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCC
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQ  248 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~  248 (253)
                           .....+...+..+.+++.+||+.||.+|||++++++.|+.+.....-|+.
T Consensus       256 -----~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~  305 (309)
T 3p86_A          256 -----KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN  305 (309)
T ss_dssp             -----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-------
T ss_pred             -----CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCC
Confidence                 01111223345688899999999999999999999999999865544433

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=7.3e-31  Score=219.22  Aligned_cols=199  Identities=14%  Similarity=0.165  Sum_probs=132.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe------cCe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE------KGV  103 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~------~~~  103 (253)
                      ++|++++.||+|+||.|++    .+|+.||||+++..  .....+.+.+|+.+|+.++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            4699999999999999665    57999999999754  23445678999999999999999999999864      357


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      +|||||||. |+|.+++....   .++......+                                              
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~~---~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSSQ---PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSSS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             EEEEEeCCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            899999996 68988884321   1111111100                                              


Q ss_pred             -----------------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC-Ccc
Q 043709          138 -----------------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG-SLW  192 (253)
Q Consensus       138 -----------------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~  192 (253)
                                             ++. ...|+.++||||+||++|||++|..||......  .....+........ ...
T Consensus       210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~--~~l~~I~~~~g~p~~~~~  287 (398)
T 4b99_A          210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV--HQLQLIMMVLGTPSPAVI  287 (398)
T ss_dssp             ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH--HHHHHHHHHHCCCCGGGT
T ss_pred             cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH--HHHHHHHHhcCCCChHHh
Confidence                                   122 234789999999999999999999998754321  12221111110000 000


Q ss_pred             c---------cccc-cCCCCCC-----HHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          193 D---------LMDP-MLQTEAS-----YPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       193 ~---------~~~~-~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      .         .... .......     ......+.+|+.+||..||++|||++|+++  .|.+..
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            0         0000 0000001     123456888999999999999999999985  455543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=3e-30  Score=209.62  Aligned_cols=193  Identities=20%  Similarity=0.295  Sum_probs=141.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++...+....+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            36799999999999999655    46899999999776667778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +.+|+|.+++.....  .+++.....+                                                     
T Consensus        89 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (310)
T 3s95_A           89 IKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE  166 (310)
T ss_dssp             CTTCBHHHHHHHCCT--TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred             cCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence            999999998853211  1111111111                                                     


Q ss_pred             --------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 --------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 --------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                                ......++.++||||||+++|||++|..|+.............. ..       
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-~~-------  238 (310)
T 3s95_A          167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV-RG-------  238 (310)
T ss_dssp             -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH-HH-------
T ss_pred             ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh-hc-------
Confidence                                      11223467899999999999999999998765443322111111 00       


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCC
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL  243 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~  243 (253)
                        ....    .....++..+.+++.+||+.||++|||+.++++.|+.+...+
T Consensus       239 --~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          239 --FLDR----YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             --HHHH----TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             --cccc----cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence              0000    011122345778888899999999999999999999887443

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.96  E-value=6.2e-30  Score=211.34  Aligned_cols=86  Identities=20%  Similarity=0.289  Sum_probs=74.6

Q ss_pred             HHhcCccccCccccccccceEee-------CCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCee
Q 043709           33 AATDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~  104 (253)
                      ...+.|++.+.||+|+||+|++.       +++.||||.+...  ....++.+|+.+|+.+ .|||||++++++.+.+.+
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~   95 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV   95 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence            34578999999999999997653       4678999998754  3346788999999998 699999999999999999


Q ss_pred             EEEEeeCCCCChhhhc
Q 043709          105 ILIYEHMPNKSLDYFL  120 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l  120 (253)
                      ++|||||++|+|.+++
T Consensus        96 ~lvmE~~~g~~L~~~~  111 (361)
T 4f9c_A           96 VIAMPYLEHESFLDIL  111 (361)
T ss_dssp             EEEEECCCCCCHHHHH
T ss_pred             EEEEeCCCcccHHHHH
Confidence            9999999999998887

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=6.8e-31  Score=214.00  Aligned_cols=209  Identities=19%  Similarity=0.187  Sum_probs=142.8

Q ss_pred             cccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           25 FFSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        25 ~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      .++-+.+....++|++.+.||+|+||.+++    .+++.||||++........+.+.+|+.+++.++||||+++++++..
T Consensus        18 ~~~g~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   97 (317)
T 2buj_A           18 YFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR   97 (317)
T ss_dssp             SEEEEEEEETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE
T ss_pred             eecccEEEECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEe
Confidence            333333445567899999999999999654    5789999999976666667889999999999999999999999873


Q ss_pred             ----cCeeEEEEeeCCCCChhhhccCCC-CcCCCCccceeee--------------------------------------
Q 043709          101 ----KGVKILIYEHMPNKSLDYFLFDPA-NKGRLGWGTRVRI--------------------------------------  137 (253)
Q Consensus       101 ----~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i--------------------------------------  137 (253)
                          .+..++||||+.+|+|.+++.... ....+++.....+                                      
T Consensus        98 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~d  177 (317)
T 2buj_A           98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMD  177 (317)
T ss_dssp             EETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECC
T ss_pred             ccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEe
Confidence                347899999999999998874310 0111111111111                                      


Q ss_pred             ------------------------------------eee---cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchh
Q 043709          138 ------------------------------------YAL---HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL  178 (253)
Q Consensus       138 ------------------------------------~~~---~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~  178 (253)
                                                          ...   ...++.++|||||||++|||++|..||...........
T Consensus       178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  257 (317)
T 2buj_A          178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA  257 (317)
T ss_dssp             CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH
T ss_pred             cCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh
Confidence                                                000   11257799999999999999999999864322222111


Q ss_pred             hhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCC
Q 043709          179 GYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQ  247 (253)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~  247 (253)
                      ...    .          ...........+..+.+++.+||+.||.+|||+.++++.|+.+....+.+.
T Consensus       258 ~~~----~----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~~~  312 (317)
T 2buj_A          258 LAV----Q----------NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQH  312 (317)
T ss_dssp             HHH----H----------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC--
T ss_pred             HHh----h----------ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCCCC
Confidence            111    0          001111112234578889999999999999999999999999886555443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.96  E-value=4e-31  Score=213.30  Aligned_cols=208  Identities=23%  Similarity=0.325  Sum_probs=140.3

Q ss_pred             hcCccccCccccccccceEe--------eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec--Cee
Q 043709           35 TDNFSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~  104 (253)
                      .++|++.+.||+|+||.+++        .+++.||||++........+.+.+|+.+++.++||||+++++++...  ..+
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            46799999999999999654        36889999999876666678899999999999999999999998653  568


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+++|+|.+++.....  .+++.....+                                               
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~  166 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  166 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHCGG--GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred             EEEEEeCCCCCHHHHHHhccc--ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence            999999999999998843211  1111111111                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++||||||+++|||++|..|+.............................
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (295)
T 3ugc_A          167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK  246 (295)
T ss_dssp             ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred             CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence                                 11234578899999999999999999988754321100000000000000000000111


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      .......+..++..+.+++.+||+.||++|||+.++++.|+.+...++
T Consensus       247 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~  294 (295)
T 3ugc_A          247 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA  294 (295)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence            111112223345678889999999999999999999999999886653

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=1.1e-29  Score=205.18  Aligned_cols=187  Identities=16%  Similarity=0.243  Sum_probs=134.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            446899999999999999665    5688999999987666667889999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCc-----------------------------------------CCCCccceeee-----------
Q 043709          110 HMPNKSLDYFLFDPANK-----------------------------------------GRLGWGTRVRI-----------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~-----------------------------------------~~~~~~~~~~i-----------  137 (253)
                      |+.+|+|.+++......                                         ...++.....+           
T Consensus        98 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  177 (297)
T 3fxz_A           98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV  177 (297)
T ss_dssp             CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCC
T ss_pred             CCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCcc
Confidence            99999999987321100                                         00000000000           


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPIL  208 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (253)
                               ......++.++|||||||++|||++|..||.......  .....   .. .. .       .........+
T Consensus       178 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~~---~~-~~-~-------~~~~~~~~~~  243 (297)
T 3fxz_A          178 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYLI---AT-NG-T-------PELQNPEKLS  243 (297)
T ss_dssp             SCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHH---HH-HC-S-------CCCSCGGGSC
T ss_pred             CCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH---Hh-CC-C-------CCCCCccccC
Confidence                     1234457889999999999999999999986432211  11111   00 00 0       0011122344


Q ss_pred             HHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          209 KRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       209 ~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+.+++.+||+.||++|||++++++
T Consensus       244 ~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          244 AIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhh
Confidence            56788999999999999999999985

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=4.3e-30  Score=213.72  Aligned_cols=191  Identities=22%  Similarity=0.364  Sum_probs=138.9

Q ss_pred             hcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEec
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEK  101 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~  101 (253)
                      .++|++.+.||+|+||.+++.           ++..||||++... .....+.+.+|+.+++.+ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            467999999999999996652           2457999999765 344567899999999999 899999999999999


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee-------------------------------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI-------------------------------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i-------------------------------  137 (253)
                      +.+++||||+.+|+|.+++......             ..+.+.....+                               
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  239 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN  239 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence            9999999999999999998643211             01111111111                               


Q ss_pred             ------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhh
Q 043709          138 ------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGY  180 (253)
Q Consensus       138 ------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~  180 (253)
                                                          ......++.++|||||||++|||++ |..||.....  ..+...
T Consensus       240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~--~~~~~~  317 (370)
T 2psq_A          240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EELFKL  317 (370)
T ss_dssp             CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHH
T ss_pred             CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH
Confidence                                                1123457889999999999999999 8888764332  111111


Q ss_pred             hhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          181 VIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      +    . .+         .....+..++..+.+++.+||+.||++||++.++++.|+.++.
T Consensus       318 ~----~-~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          318 L----K-EG---------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             H----H-TT---------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             H----h-cC---------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            1    1 11         1111222344578889999999999999999999999998874

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=205.81  Aligned_cols=197  Identities=21%  Similarity=0.349  Sum_probs=140.5

Q ss_pred             hcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           35 TDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .++|++.+.||+|+||.+++  ..++.||||.+...  ...+.+.+|+.+++.++||||+++++++.  +..++||||++
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            35789999999999999655  56889999999743  45578999999999999999999999877  44899999999


Q ss_pred             CCChhhhccCCCCcCCCCccce----------------------------------------eee---------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTR----------------------------------------VRI---------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~----------------------------------------~~i---------------  137 (253)
                      +|+|.+++..............                                        ..+               
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~  162 (307)
T 2eva_A           83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN  162 (307)
T ss_dssp             TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred             CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccccc
Confidence            9999998854321111110000                                        000               


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ......++.++|||||||++|||++|..||............    .... +..         ......
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~-~~~---------~~~~~~  228 (307)
T 2eva_A          163 NKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW----AVHN-GTR---------PPLIKN  228 (307)
T ss_dssp             --CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH----HHHT-TCC---------CCCBTT
T ss_pred             CCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH----HHhc-CCC---------CCcccc
Confidence                       112235778999999999999999999998644332211111    1111 110         111122


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCC
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQS  249 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~  249 (253)
                      .+..+.+++.+||+.||++|||++++++.|+.+...++....|
T Consensus       229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~~  271 (307)
T 2eva_A          229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP  271 (307)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTSC
T ss_pred             cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCCc
Confidence            3456788999999999999999999999999998777655444

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.96  E-value=3.1e-30  Score=213.60  Aligned_cols=203  Identities=23%  Similarity=0.335  Sum_probs=146.1

Q ss_pred             ccccHHHHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcc
Q 043709           24 PFFSLASISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLV   92 (253)
Q Consensus        24 ~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv   92 (253)
                      .-+...++....++|++.+.||+|+||.+++.         +++.||||++... .....+.+.+|+.+++.+ +||||+
T Consensus        10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv   89 (359)
T 3vhe_A           10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV   89 (359)
T ss_dssp             SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence            34667788888999999999999999996552         3578999999764 334456799999999999 799999


Q ss_pred             eEeEEEEecC-eeEEEEeeCCCCChhhhccCCCCcC--------------------------------------------
Q 043709           93 RIIGCCVEKG-VKILIYEHMPNKSLDYFLFDPANKG--------------------------------------------  127 (253)
Q Consensus        93 ~~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~--------------------------------------------  127 (253)
                      ++++++...+ ..++|||||.+|+|.+++.......                                            
T Consensus        90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (359)
T 3vhe_A           90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE  169 (359)
T ss_dssp             CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred             eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence            9999998764 4899999999999999986533210                                            


Q ss_pred             -------------------CCCccceeee---------------------------------------------------
Q 043709          128 -------------------RLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       128 -------------------~~~~~~~~~i---------------------------------------------------  137 (253)
                                         .+++.....+                                                   
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  249 (359)
T 3vhe_A          170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY  249 (359)
T ss_dssp             --------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred             ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence                               0111100000                                                   


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                      ......++.++|||||||++|||++ |..||....... ...... .    .+.         .
T Consensus       250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~-~----~~~---------~  314 (359)
T 3vhe_A          250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRL-K----EGT---------R  314 (359)
T ss_dssp             EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHH-H----HTC---------C
T ss_pred             hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHH-H----cCC---------C
Confidence                            1123457889999999999999998 898886543321 111111 0    010         0


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ...+...+..+.+++.+||+.||++|||++++++.|++++.
T Consensus       315 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~  355 (359)
T 3vhe_A          315 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  355 (359)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            11111233567888899999999999999999999998874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=5.3e-30  Score=209.63  Aligned_cols=192  Identities=23%  Similarity=0.340  Sum_probs=139.9

Q ss_pred             hcCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|++.+.||+|+||.+++.       .+..||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            357889999999999996542       2345999999865 44556789999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+.+|+|.++++....  .+.+.....+                                                 
T Consensus       128 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  205 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP  205 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred             EeeCCCCCcHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence            9999999999999853221  1221111111                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++|||++ |..||.....  ..+...+    . .+        
T Consensus       206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~----~-~~--------  270 (325)
T 3kul_A          206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSV----E-EG--------  270 (325)
T ss_dssp             -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHH----H-TT--------
T ss_pred             cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH----H-cC--------
Confidence                               1112456788999999999999999 8888854322  1111111    1 11        


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                       ........++..+.+++.+||..||.+|||+.+|++.|+.+.....
T Consensus       271 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~  316 (325)
T 3kul_A          271 -YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE  316 (325)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred             -CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence             1111222344678889999999999999999999999999986554

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=1.2e-30  Score=217.64  Aligned_cols=194  Identities=22%  Similarity=0.294  Sum_probs=139.7

Q ss_pred             HHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .+....++|++.+.||+|+||.+++    .+++.||||.+... .....+.+.+|+.+|+.++||||+++++++...+..
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  187 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI  187 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence            3445567899999999999999654    36889999999754 334455789999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+++|+|.++++....  .+++.....+                                               
T Consensus       188 ~lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             EEEEEcCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            999999999999998842110  0111111100                                               


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                          ....+.++.++|||||||++|||++ |..||.....  ......+     ..+.      
T Consensus       266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~~~~-----~~~~------  332 (377)
T 3cbl_A          266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTREFV-----EKGG------  332 (377)
T ss_dssp             SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHHHHH-----HTTC------
T ss_pred             CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH-----HcCC------
Confidence                                1122457789999999999999998 8888764322  1111111     1111      


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                         +...+..++..+.+++.+||+.||++|||+++|++.|+++..
T Consensus       333 ---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          333 ---RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence               111122234577889999999999999999999999998763

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.96  E-value=6.8e-30  Score=212.70  Aligned_cols=190  Identities=24%  Similarity=0.344  Sum_probs=138.5

Q ss_pred             hcCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|++.+.||+|+||.+++.       ++..||||.+... .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            357999999999999997752       4667999999765 34456789999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+++|+|.++++....  .+++.....+                                                 
T Consensus       124 v~e~~~~~sL~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  201 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKHDA--QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP  201 (373)
T ss_dssp             EEECCTTCBHHHHHHTTTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence            9999999999999854221  1222111111                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++||+++ |..||.....  ..+...+    . .+        
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~i----~-~~--------  266 (373)
T 2qol_A          202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKAV----D-EG--------  266 (373)
T ss_dssp             ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHHH----H-TT--------
T ss_pred             ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----H-cC--------
Confidence                               1122457789999999999999998 8888864322  1111111    0 00        


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                       .........+..+.+++.+||+.||.+||++.+|++.|+.+...
T Consensus       267 -~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          267 -YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             -EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence             11111223446788899999999999999999999999988643

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.96  E-value=1.5e-29  Score=215.58  Aligned_cols=191  Identities=26%  Similarity=0.354  Sum_probs=140.8

Q ss_pred             HHHhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecC-eeEEEE
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-VKILIY  108 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-~~~lv~  108 (253)
                      ....++|++.+.||+|+||.+++  ..++.||||+++...  ..+.+.+|+.+|++++||||+++++++...+ .+++||
T Consensus       189 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          189 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             ccChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            34557899999999999999655  568899999998643  5578999999999999999999999987765 799999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.++++..... .+.......+                                                   
T Consensus       267 e~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  345 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT  345 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EecCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccC
Confidence            999999999998542211 1111111111                                                   


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                 ......++.++|||||||++|||++ |..||......  .....+    . .+         .+...+.
T Consensus       346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i----~-~~---------~~~~~p~  409 (450)
T 1k9a_A          346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRV----E-KG---------YKMDAPD  409 (450)
T ss_dssp             -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHH----H-TT---------CCCCCCT
T ss_pred             CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH----H-cC---------CCCCCCC
Confidence                       1223457889999999999999998 88888644322  122111    0 11         1112223


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .++..+.+++.+||+.||.+|||+.+|++.|+++..
T Consensus       410 ~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          410 GCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            345678889999999999999999999999998763

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.96  E-value=8.9e-30  Score=222.34  Aligned_cols=181  Identities=19%  Similarity=0.156  Sum_probs=127.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHH---HHHHHhccCCCcceEeEEEEecCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNE---MMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E---~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ++|++++.||+|+||+|++    .+|+.||||++.+.   .........+|   +.+++.++|||||++++++.+.+.+|
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            5799999999999999665    57999999999753   12233334444   56667778999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i------------  137 (253)
                      ||||||+||+|.++|.+..   .++......                                    +            
T Consensus       269 lVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence            9999999999999883211   111110000                                    0            


Q ss_pred             ---------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcc-hhhhhhHhhhcCCCccccccccCC
Q 043709          138 ---------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLT-LLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 ---------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                     ++. +..|+.++|+||+||++|||++|..||......... +...+   ....            
T Consensus       346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i---~~~~------------  410 (689)
T 3v5w_A          346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---LTMA------------  410 (689)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHH---HHCC------------
T ss_pred             CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh---cCCC------------
Confidence                           233 346999999999999999999999999754432211 11111   1000            


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      ...+..++..+.+|+.+||..||.+|++     +++|++
T Consensus       411 ~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence            1111234467888999999999999998     688774

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.95  E-value=3.2e-30  Score=210.31  Aligned_cols=202  Identities=25%  Similarity=0.324  Sum_probs=138.0

Q ss_pred             ccccCccccccccceEe--------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeEE
Q 043709           38 FSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKIL  106 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~l  106 (253)
                      |++++.||+|+||.+++        .+++.||||++... .....+.+.+|+.+++.++||||+++++++.+.  ..+++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            48999999999999743        26889999999865 344567799999999999999999999999874  67899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+++|+|.+++....    +++.....+                                                 
T Consensus       113 v~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  188 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH  188 (318)
T ss_dssp             EECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred             EEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence            999999999999884322    111111111                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         ......++.++|||||||++|||++|..||.............. ................
T Consensus       189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  267 (318)
T 3lxp_A          189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA-QGQMTVLRLTELLERG  267 (318)
T ss_dssp             SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC-CHHHHHHHHHHHHHTT
T ss_pred             cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhccc-ccchhHHHHHHHHhcc
Confidence                               11223467789999999999999999999864322110000000 0000000001111111


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      .........+..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus       268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            1222223345678889999999999999999999999999875543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=3.6e-28  Score=198.19  Aligned_cols=205  Identities=16%  Similarity=0.155  Sum_probs=143.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC--eeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG--VKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~--~~~lv  107 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            35799999999999999655    45889999999754 3445678899999999999999999999998665  78999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCcccee----------------------------------------ee----------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRV----------------------------------------RI----------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~----------------------------------------~i----------  137 (253)
                      |||+++|+|.+++........+++....                                        .+          
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            9999999999988543221111111111                                        01          


Q ss_pred             ------------------ee--------ecCccccccceeehhHHHHHHHhCCCCcCcCCCC--CcchhhhhhHhhhcCC
Q 043709          138 ------------------YA--------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN--SLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ------------------~~--------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~--~~~~~~~~~~~~~~~~  189 (253)
                                        ..        ....++.++|||||||++|||++|..||......  .......+.... ...
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-p~~  246 (319)
T 4euu_A          168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK-PSG  246 (319)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC-CTT
T ss_pred             CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC-Ccc
Confidence                              00        1356788999999999999999999999754432  122222221111 111


Q ss_pred             Cccccc-----------cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          190 SLWDLM-----------DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       190 ~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ......           ...............+.+++.+||+.||++|||++|+++...+..
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             cchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence            000000           001112344567778899999999999999999999999888766

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=1.2e-28  Score=201.24  Aligned_cols=195  Identities=17%  Similarity=0.218  Sum_probs=141.1

Q ss_pred             CcccccHHHHHHHhcC----------ccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc
Q 043709           22 CIPFFSLASISAATDN----------FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ   87 (253)
Q Consensus        22 ~~~~~~~~~l~~~~~~----------~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~   87 (253)
                      ....|+.+++...++.          |+..+.||+|+||.+++    .+++.||||++........+.+.+|+.+++.++
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~  100 (321)
T 2c30_A           21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ  100 (321)
T ss_dssp             ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred             cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence            3456889998877764          77788999999999665    368999999998766667788999999999999


Q ss_pred             CCCcceEeEEEEecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------
Q 043709           88 DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------  137 (253)
Q Consensus        88 H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------  137 (253)
                      ||||+++++++...+..++||||+++|+|.+++....    +++.....+                              
T Consensus       101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~----l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~  176 (321)
T 2c30_A          101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR----LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL  176 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred             CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence            9999999999999999999999999999999874321    111111000                              


Q ss_pred             -----------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh
Q 043709          138 -----------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI  182 (253)
Q Consensus       138 -----------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~  182 (253)
                                                         ......++.++|||||||++|||++|..||.....  ....... 
T Consensus       177 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~-  253 (321)
T 2c30_A          177 DGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRL-  253 (321)
T ss_dssp             TCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHH-
T ss_pred             CCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH-
Confidence                                               11234577899999999999999999999864322  1111111 


Q ss_pred             HhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          183 WNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         .. ..     .+..  ......+..+.+++.+||+.||++|||+.++++
T Consensus       254 ---~~-~~-----~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          254 ---RD-SP-----PPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             ---HH-SS-----CCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---hc-CC-----CCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               00 00     0000  111223456788899999999999999999986

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.95  E-value=2.4e-29  Score=216.63  Aligned_cols=196  Identities=23%  Similarity=0.316  Sum_probs=143.8

Q ss_pred             HHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           29 ASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        29 ~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .++....++|++.+.||+|+||.+++    .++..||||.+.... ...+.|.+|+.+|+.++||||+++++++...+..
T Consensus       213 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             SCCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             cccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcE
Confidence            34555667899999999999999655    347899999997543 3567899999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+.+|+|.++++.... ..+.+.....+                                               
T Consensus       292 ~lv~E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred             EEEEEccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence            999999999999999854221 11222111111                                               


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         .+....++.++|||||||++|||++ |..||......  .+...+              ..
T Consensus       371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~--------------~~  434 (495)
T 1opk_A          371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELL--------------EK  434 (495)
T ss_dssp             CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH--------------HT
T ss_pred             CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHH--------------Hc
Confidence                               1122346789999999999999999 88887643321  111111              11


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      ..+...+..++..+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus       435 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          435 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence            111122233456788899999999999999999999999998754

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.95  E-value=8.3e-30  Score=202.83  Aligned_cols=190  Identities=22%  Similarity=0.262  Sum_probs=136.2

Q ss_pred             hcCccccCccccccccceEe--eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec--CeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~~lv~  108 (253)
                      .++|++.+.||+|+||.+++  ..++.||||++...  .....+.+.+|+.+++.++||||+++++++.+.  +..+++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            46799999999999999555  56889999999754  344456799999999999999999999999877  7889999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++...... .+++.....+                                                   
T Consensus        89 e~~~~~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~  167 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEGTNF-VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPG  167 (271)
T ss_dssp             ECCTTCBHHHHHHSCSSC-CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTT
T ss_pred             cccCCCcHHHHHhhcccC-CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccC
Confidence            999999999999653211 1111111111                                                   


Q ss_pred             -----------eeec---CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -----------YALH---GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -----------~~~~---~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                 ....   ..++.++|||||||++|||++|..||.......  ..    .......         .....
T Consensus       168 ~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~----~~~~~~~---------~~~~~  232 (271)
T 3kmu_A          168 RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME--IG----MKVALEG---------LRPTI  232 (271)
T ss_dssp             CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH--HH----HHHHHSC---------CCCCC
T ss_pred             ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH--HH----HHHHhcC---------CCCCC
Confidence                       0111   122337999999999999999999986433211  11    1111111         11111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      +...+..+.+++.+||+.||++|||++++++.|+++.
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          233 PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            2233456888899999999999999999999999875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=7.6e-30  Score=217.51  Aligned_cols=204  Identities=25%  Similarity=0.313  Sum_probs=146.1

Q ss_pred             HHHHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           28 LASISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      ...+....++|++.+.||+|+||.+++   ..+..||||++.... ...+.+.+|+.+|+.++||||+++++++.. +..
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence            344556678899999999999999665   335679999998643 345789999999999999999999999876 678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+.+|+|.+++.... ...+++.....+                                               
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  332 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred             EEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence            99999999999999984211 001111111111                                               


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++|||++ |..||.....  .+....+    . .+        
T Consensus       333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i----~-~~--------  397 (452)
T 1fmk_A          333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV----E-RG--------  397 (452)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH----H-TT--------
T ss_pred             CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----H-cC--------
Confidence                               1123457889999999999999999 8888764322  1111111    1 11        


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSA  250 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~  250 (253)
                       .+...+..++..+.+++.+||+.||++|||+++|++.|+++........+|+
T Consensus       398 -~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~~~  449 (452)
T 1fmk_A          398 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG  449 (452)
T ss_dssp             -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCCS
T ss_pred             -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcccccc
Confidence             1111222345678889999999999999999999999999997766555553

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.95  E-value=1.7e-29  Score=205.29  Aligned_cols=196  Identities=24%  Similarity=0.392  Sum_probs=141.6

Q ss_pred             HHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCV   99 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~   99 (253)
                      ++....++|.+.+.||+|+||.+++.         ++..||||++... .....+.+.+|+.+++.++||||+++++++.
T Consensus        17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   96 (314)
T 2ivs_A           17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS   96 (314)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe
Confidence            33445678999999999999996552         3478999999754 3455678999999999999999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCCCcC---------------------CCCccceeee---------------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPANKG---------------------RLGWGTRVRI---------------------  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~---------------------~~~~~~~~~i---------------------  137 (253)
                      ..+..++||||+.+|+|.+++.......                     .+++.....+                     
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di  176 (314)
T 2ivs_A           97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDL  176 (314)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccccc
Confidence            9999999999999999999986432210                     0111111111                     


Q ss_pred             ----------------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcC
Q 043709          138 ----------------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFY  170 (253)
Q Consensus       138 ----------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~  170 (253)
                                                                    ......++.++|||||||++|||++ |..||...
T Consensus       177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                                                          0112336789999999999999999 88888644


Q ss_pred             CCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          171 NTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ...  .+....     ....         ........+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       257 ~~~--~~~~~~-----~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          257 PPE--RLFNLL-----KTGH---------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             CGG--GHHHHH-----HTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHH--HHHHHh-----hcCC---------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            321  111111     1111         111122344678889999999999999999999999998874

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=9.8e-30  Score=211.37  Aligned_cols=193  Identities=26%  Similarity=0.369  Sum_probs=138.4

Q ss_pred             HhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      ..++|++.+.||+|+||.+++         .++..||||++... .......+.+|+.+++.++||||+++++++...+.
T Consensus        69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  148 (367)
T ss_dssp             CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence            346799999999999999654         24568999999754 34455679999999999999999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCc----CCCCcccee---------------------------------------ee---
Q 043709          104 KILIYEHMPNKSLDYFLFDPANK----GRLGWGTRV---------------------------------------RI---  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~---------------------------------------~i---  137 (253)
                      .++|||||.+|+|.+++......    ..+.+....                                       .+   
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DF  228 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF  228 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCC
Confidence            99999999999999988532110    011111110                                       00   


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                                  .+....++.++|||||||++|||++ |..||.....  ..+...+    . .
T Consensus       229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~i----~-~  301 (367)
T 3l9p_A          229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFV----T-S  301 (367)
T ss_dssp             HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH----H-T
T ss_pred             ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----H-c
Confidence                                        1123457889999999999999998 8888764322  1111111    1 1


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      +.         ........+..+.+++.+||+.||.+|||+.+|++.|+.+...
T Consensus       302 ~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~  346 (367)
T 3l9p_A          302 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  346 (367)
T ss_dssp             TC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CC---------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence            11         1111223345678899999999999999999999999888754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.4e-29  Score=207.19  Aligned_cols=200  Identities=23%  Similarity=0.378  Sum_probs=140.0

Q ss_pred             HHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      ++....++|++.+.||+|+||.++..         ++..||||++... .....+.+.+|+.+++.+ .||||+++++++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            34556788999999999999996542         3457999999754 344567899999999999 899999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCc--------------------CCCCccceeee---------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANK--------------------GRLGWGTRVRI---------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i---------------------  137 (253)
                      ...+..++||||+++|+|.+++......                    ..+++.....+                     
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  198 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  198 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            9999999999999999999998653221                    00111111111                     


Q ss_pred             ----------------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcC
Q 043709          138 ----------------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFY  170 (253)
Q Consensus       138 ----------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~  170 (253)
                                                                    ......++.++|||||||++|||++ |..||...
T Consensus       199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             SGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             ChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence                                                          1123457789999999999999998 88888654


Q ss_pred             CCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          171 NTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      .... ......     ..+         .....+...+..+.+++.+||..||.+|||+.++++.|+.++....
T Consensus       279 ~~~~-~~~~~~-----~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  337 (344)
T 1rjb_A          279 PVDA-NFYKLI-----QNG---------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE  337 (344)
T ss_dssp             CCSH-HHHHHH-----HTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             CcHH-HHHHHH-----hcC---------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence            3221 111111     111         1111122234678889999999999999999999999999886544

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.95  E-value=2e-29  Score=210.58  Aligned_cols=200  Identities=23%  Similarity=0.348  Sum_probs=143.2

Q ss_pred             HHHhcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           32 SAATDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      ....++|.+.+.||+|+||.+++.           .+..||||++... .....+.+.+|+.+++.+ +||||+++++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            445678999999999999996652           2257999999765 344557899999999999 899999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee----------------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI----------------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i----------------------------  137 (253)
                      ...+..++||||+.+|+|.+++......             ..+++.....+                            
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  224 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV  224 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEE
Confidence            9999999999999999999998543211             01111111111                            


Q ss_pred             ---------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcch
Q 043709          138 ---------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTL  177 (253)
Q Consensus       138 ---------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~  177 (253)
                                                             ......++.++|||||||++|||++ |..||.....  ..+
T Consensus       225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--~~~  302 (382)
T 3tt0_A          225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EEL  302 (382)
T ss_dssp             CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHH
T ss_pred             cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence                                                   1123346789999999999999999 8888764322  111


Q ss_pred             hhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCC
Q 043709          178 LGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQ  247 (253)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~  247 (253)
                      ...+     ..+.         ........+..+.+++.+||+.||++|||+.+|++.|+.+........
T Consensus       303 ~~~~-----~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~  358 (382)
T 3tt0_A          303 FKLL-----KEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE  358 (382)
T ss_dssp             HHHH-----HTTC---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred             HHHH-----HcCC---------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence            1111     1111         111112234568889999999999999999999999999986554443

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=1.3e-28  Score=201.26  Aligned_cols=183  Identities=19%  Similarity=0.174  Sum_probs=130.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            36899999999999999665    478999999997542 3334678999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      ||.+|+|.+++.....   +++.....+                                                    
T Consensus        86 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           86 YCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             CCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             cCCCCcHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            9999999998853221   111111110                                                    


Q ss_pred             ---------------eeecCc-cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ---------------YALHGV-FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ---------------~~~~~~-~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                     ...... ++.++|||||||++|+|++|..||..............     ...         ...
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-----~~~---------~~~  228 (323)
T 3tki_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-----EKK---------TYL  228 (323)
T ss_dssp             CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH-----TTC---------TTS
T ss_pred             ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-----ccc---------ccC
Confidence                           011122 36789999999999999999999975544322221111     000         001


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .........+.+++.+||..||++|||++++++
T Consensus       229 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            111233456778999999999999999999985

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.95  E-value=1.4e-29  Score=208.27  Aligned_cols=199  Identities=24%  Similarity=0.356  Sum_probs=142.5

Q ss_pred             HHHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEE
Q 043709           29 ASISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCC   98 (253)
Q Consensus        29 ~~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~   98 (253)
                      ..+....++|++.+.||+|+||.+++.         +++.||||++... .....+.+.+|+.+++.++||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~  119 (343)
T 1luf_A           40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC  119 (343)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            344456689999999999999996652         2378999999865 344467899999999999999999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCc---------------------CCCCccceeee--------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANK---------------------GRLGWGTRVRI--------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~---------------------~~~~~~~~~~i--------------------  137 (253)
                      .+.+..++||||+++|+|.+++......                     ..+++.....+                    
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~D  199 (343)
T 1luf_A          120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  199 (343)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            9999999999999999999998542210                     11111111111                    


Q ss_pred             -----------------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCc
Q 043709          138 -----------------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHF  169 (253)
Q Consensus       138 -----------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~  169 (253)
                                                                     ......++.++|||||||++|||++ |..||..
T Consensus       200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence                                                           1122457789999999999999999 8888864


Q ss_pred             CCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCC
Q 043709          170 YNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL  243 (253)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~  243 (253)
                      ...  ..+...+     ..+...         ..+...+..+.+++.+||+.||++|||+.++++.|+++....
T Consensus       280 ~~~--~~~~~~~-----~~~~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~  337 (343)
T 1luf_A          280 MAH--EEVIYYV-----RDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA  337 (343)
T ss_dssp             SCH--HHHHHHH-----HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred             CCh--HHHHHHH-----hCCCcC---------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence            322  1111111     111111         111223457888999999999999999999999999988544

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.95  E-value=3.2e-29  Score=203.64  Aligned_cols=197  Identities=21%  Similarity=0.315  Sum_probs=141.7

Q ss_pred             HHHHhcCccccCccccccccceEee---------CCCEEEEEEecccc-cccHHHHHHHHHHHHhc-cCCCcceEeEEEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKL-QDINLVRIIGCCV   99 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~   99 (253)
                      +....++|++.+.||+|+||.+++.         +++.||||++.... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            4455678999999999999996542         45789999997653 34567899999999999 8999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCCCc---------------CCCCccceeee---------------------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPANK---------------GRLGWGTRVRI---------------------------  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~~~i---------------------------  137 (253)
                      ..+..++||||+++|+|.+++......               ..+++.....+                           
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil  177 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL  177 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEE
Confidence            999999999999999999998543211               01111111111                           


Q ss_pred             ----------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcc
Q 043709          138 ----------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLT  176 (253)
Q Consensus       138 ----------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~  176 (253)
                                                              ......++.++|||||||++|||++ |..||....... .
T Consensus       178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~  256 (313)
T 1t46_A          178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-K  256 (313)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-H
T ss_pred             EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-H
Confidence                                                    1123446788999999999999999 888876443221 1


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      ..... ...             .........+..+.+++.+||+.||.+|||+.++++.|+++...
T Consensus       257 ~~~~~-~~~-------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          257 FYKMI-KEG-------------FRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHHHH-HHT-------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHh-ccC-------------CCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            11111 110             11111122345788899999999999999999999999998754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.95  E-value=7e-29  Score=199.43  Aligned_cols=191  Identities=12%  Similarity=0.029  Sum_probs=137.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||||++....   ....+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            5799999999999999665    458899999997652   334578999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------eeecCccccccce
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------YALHGVFSIKSDV  150 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------~~~~~~~~~~~Di  150 (253)
                      ||+.+++|.+++.+..    ... ....+                                      -.....++.++||
T Consensus       111 e~~~g~~L~~~l~~~~----~~~-~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~Di  185 (286)
T 3uqc_A          111 EWIRGGSLQEVADTSP----SPV-GAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDI  185 (286)
T ss_dssp             ECCCEEEHHHHHTTCC----CHH-HHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHHHH
T ss_pred             EecCCCCHHHHHhcCC----ChH-HHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCCCCchhHH
Confidence            9999999999984321    000 01111                                      0112357889999


Q ss_pred             eehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHH
Q 043709          151 FSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTML  230 (253)
Q Consensus       151 wSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~  230 (253)
                      |||||++|||++|..||.............   ... ...   ..   ........++..+.+++.+||+.||++| |+.
T Consensus       186 ~slG~il~elltg~~Pf~~~~~~~~~~~~~---~~~-~~~---~~---~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~  254 (286)
T 3uqc_A          186 RGIGASLYALLVNRWPLPEAGVRSGLAPAE---RDT-AGQ---PI---EPADIDRDIPFQISAVAARSVQGDGGIR-SAS  254 (286)
T ss_dssp             HHHHHHHHHHHHSEECSCCCSBCCCSEECC---BCT-TSC---BC---CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCCcchhhHHHH---HHh-ccC---CC---ChhhcccCCCHHHHHHHHHHcccCCccC-CHH
Confidence            999999999999999987544321100000   000 000   00   0001112234568889999999999999 999


Q ss_pred             HHHHHHhhcccC
Q 043709          231 EIVSMLSNEIVN  242 (253)
Q Consensus       231 ~il~~L~~~~~~  242 (253)
                      ++++.|+.+...
T Consensus       255 el~~~L~~~~~~  266 (286)
T 3uqc_A          255 TLLNLMQQATAV  266 (286)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHHhcc
Confidence            999999997743

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=7.1e-29  Score=197.57  Aligned_cols=189  Identities=24%  Similarity=0.375  Sum_probs=138.1

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..++|++.+.||+|+||.+++   .+++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   86 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence            446899999999999999655   367789999998543 3446799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++.....  .+++.....+                                                     
T Consensus        87 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  164 (269)
T 4hcu_A           87 MEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  164 (269)
T ss_dssp             CTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCCCcHHHHHHhcCc--ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccc
Confidence            999999999854221  1111111111                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++||||+|+++|+|++ |..||.....  ......+    ...          .....
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--~~~~~~~----~~~----------~~~~~  228 (269)
T 4hcu_A          165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDI----STG----------FRLYK  228 (269)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH----HTT----------CCCCC
T ss_pred             cCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHH----hcC----------ccCCC
Confidence                         1122457789999999999999999 8888764322  1111111    111          01111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      +...+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            11223567888889999999999999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.95  E-value=1.2e-28  Score=200.24  Aligned_cols=201  Identities=18%  Similarity=0.213  Sum_probs=138.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.+++.++||||+++++++...+..+++
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  110 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV  110 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence            35799999999999999665    46899999999753   344557799999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCC-CcCCCCccceeee-------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPA-NKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |||+.+|+|.+++.... ....++......+                                                 
T Consensus       111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~  190 (310)
T 2wqm_A          111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  190 (310)
T ss_dssp             EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred             EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence            99999999998874210 0000111110000                                                 


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ......++.++||||||+++|+|++|..||.........+...+     ........       
T Consensus       191 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~-------  258 (310)
T 2wqm_A          191 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-----EQCDYPPL-------  258 (310)
T ss_dssp             --------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH-----HTTCSCCC-------
T ss_pred             ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh-----hcccCCCC-------
Confidence                            11234577899999999999999999999865433222222111     11111111       


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCC
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQ  248 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~  248 (253)
                       .....+..+.+++.+||..||++|||+.+|++.|+.+......|..
T Consensus       259 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~~  304 (310)
T 2wqm_A          259 -PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLE  304 (310)
T ss_dssp             -CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC----
T ss_pred             -cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhhh
Confidence             1122345678889999999999999999999999999876666544

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=1.1e-29  Score=207.94  Aligned_cols=206  Identities=22%  Similarity=0.308  Sum_probs=138.2

Q ss_pred             cCccccCccccccccceEe--------eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEE--ecCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCV--EKGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~--~~~~~~  105 (253)
                      ++|++.+.||+|+||.+++        .+++.||||++........+.+.+|+.+++.++||||+++++++.  ..+..+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5799999999999999654        357889999998776666778999999999999999999999987  456799


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +||||+++|+|.+++.....  .+++.....+                                                
T Consensus       103 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred             EEEeecCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence            99999999999998843111  1111111111                                                


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          ......++.++|||||||++|+|++|..||.............. ...............
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE-RDVPALSRLLELLEE  259 (327)
T ss_dssp             CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-----CCHHHHHHHHHHT
T ss_pred             CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc-cccccHHHHHHHhhc
Confidence                                11223467899999999999999999999764322100000000 000000000011111


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      ..........+..+.+++.+||+.||.+|||+.++++.|+.+.....
T Consensus       260 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            11222233445678889999999999999999999999999875444

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=5.7e-29  Score=203.23  Aligned_cols=200  Identities=16%  Similarity=0.098  Sum_probs=135.7

Q ss_pred             HhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecC----eeEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG----VKILI  107 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~----~~~lv  107 (253)
                      ..++|++.+.||+|+||.+++  ..++.||||++.... .....+..|+.+++.++||||+++++++....    .+++|
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv  100 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI  100 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEECCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence            446899999999999999665  568899999997542 33345667999999999999999999998754    37999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccc----------------------------------------------eeee----
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGT----------------------------------------------RVRI----  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~----------------------------------------------~~~i----  137 (253)
                      |||+++|+|.++++...    +++..                                              ...+    
T Consensus       101 ~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg  176 (322)
T 3soc_A          101 TAFHEKGSLSDFLKANV----VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG  176 (322)
T ss_dssp             EECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred             EecCCCCCHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence            99999999998874321    00000                                              0000    


Q ss_pred             ---------------------------eee-----cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhh----
Q 043709          138 ---------------------------YAL-----HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYV----  181 (253)
Q Consensus       138 ---------------------------~~~-----~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~----  181 (253)
                                                 ...     ...++.++|||||||++|||++|..||..............    
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~  256 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH  256 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred             cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence                                       001     12455678999999999999999999876443211111000    


Q ss_pred             -----hHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          182 -----IWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       182 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                           .................   ......+..+.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          257 PSLEDMQEVVVHKKKRPVLRDY---WQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGG---GGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CchhhhhhhhhcccCCCCcccc---ccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                 00011111111111111   1122456678999999999999999999999999998764

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.95  E-value=9.4e-29  Score=199.47  Aligned_cols=194  Identities=22%  Similarity=0.263  Sum_probs=139.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|.+...   .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            46799999999999999665    46889999998643   234456799999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+++|+|.+++....   .+++.....+                                                  
T Consensus        90 ~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  166 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL  166 (294)
T ss_dssp             EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred             EeCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence            99999999999873211   1111110000                                                  


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ......++.++||||||+++|||++|..||........     . .... ......     ...
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-----~-~~~~-~~~~~~-----~~~  234 (294)
T 4eqm_A          167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-----A-IKHI-QDSVPN-----VTT  234 (294)
T ss_dssp             --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-----H-HHHH-SSCCCC-----HHH
T ss_pred             cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-----H-HHHh-hccCCC-----cch
Confidence                            12234567889999999999999999999864432111     0 0000 011100     011


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHhhcccCC
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRP-TMLEIVSMLSNEIVNL  243 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RP-s~~~il~~L~~~~~~~  243 (253)
                      ......+..+.+++.+||+.||.+|| +++++.+.|+..+...
T Consensus       235 ~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          235 DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence            11223346788899999999999998 8999999999988544

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.95  E-value=9.2e-29  Score=202.42  Aligned_cols=181  Identities=20%  Similarity=0.271  Sum_probs=131.2

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            346899999999999999654    57899999999754  344567789999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccce------------------------------------eee--------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTR------------------------------------VRI--------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~------------------------------------~~i--------------  137 (253)
                      |||+++|+|.+++.....   ++....                                    ..+              
T Consensus        93 ~e~~~~~~L~~~l~~~~~---l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  169 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAHGR---MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK  169 (328)
T ss_dssp             ECCCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred             EECCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence            999999999988732110   010000                                    000              


Q ss_pred             --------------eeecCcc-ccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 --------------YALHGVF-SIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 --------------~~~~~~~-~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                    ......+ +.++||||+||++|||++|..||......  .+...+    . .+..          .
T Consensus       170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i----~-~~~~----------~  232 (328)
T 3fe3_A          170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRERV----L-RGKY----------R  232 (328)
T ss_dssp             GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH----H-HCCC----------C
T ss_pred             cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHHHH----H-hCCC----------C
Confidence                          1112233 47899999999999999999998644321  111111    0 0100          1


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+...+..+.+++.+||..||.+|||++++++
T Consensus       233 ~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          233 IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             CCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            11123456788999999999999999999985

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.95  E-value=4.2e-29  Score=213.12  Aligned_cols=197  Identities=24%  Similarity=0.322  Sum_probs=143.5

Q ss_pred             HHHHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           28 LASISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      ..++....++|++.+.||+|+||.+++   ..+..||||+++... ...+.+.+|+.+|+.++||||+++++++. .+..
T Consensus       180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~  257 (454)
T 1qcf_A          180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI  257 (454)
T ss_dssp             TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred             ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence            445666778899999999999999665   347789999998643 45688999999999999999999999986 5678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+.+|+|.++++.... ..+.+.....+                                               
T Consensus       258 ~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          258 YIITEFMAKGSLLDFLKSDEG-SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED  336 (454)
T ss_dssp             EEEECCCTTCBHHHHHHSHHH-HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred             EEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence            999999999999999853210 01111111000                                               


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         .+....++.++|||||||++|||++ |..||.....  ..+...+    ...         
T Consensus       337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i----~~~---------  401 (454)
T 1qcf_A          337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRAL----ERG---------  401 (454)
T ss_dssp             HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH----HHT---------
T ss_pred             CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----HcC---------
Confidence                               1223557889999999999999999 8888864322  1122111    111         


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL  243 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~  243 (253)
                       .+...+..++..+.+++.+||+.||++|||+++|++.|+++....
T Consensus       402 -~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~  446 (454)
T 1qcf_A          402 -YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT  446 (454)
T ss_dssp             -CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred             -CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence             111112234567888999999999999999999999999998544

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=3.3e-30  Score=210.08  Aligned_cols=211  Identities=20%  Similarity=0.288  Sum_probs=140.7

Q ss_pred             ccHHHHHHHhcCccccCccccccccceEe-eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGPGKL-LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG  102 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~  102 (253)
                      ....++....++|++.+.||+|+||.+++ ..+..+|+|++...  .....+.+.+|+.+++.++||||+++++++.+.+
T Consensus        23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             cccccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            44556666778999999999999999665 23456999999754  2344566889999999999999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------  137 (253)
                      ..+++|||+.+++|.+++.....  .+++.....+                                             
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~  180 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISG  180 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSCC--CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC---
T ss_pred             ceEEEeecccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccc
Confidence            99999999999999999854221  1111111111                                             


Q ss_pred             ------------------------ee---------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh
Q 043709          138 ------------------------YA---------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 ------------------------~~---------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                              ..         ....++.++|||||||++|||++|..||......  ...    ..
T Consensus       181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~----~~  254 (319)
T 2y4i_B          181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AII----WQ  254 (319)
T ss_dssp             -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--HHH----HH
T ss_pred             cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHH----HH
Confidence                                    00         0234678899999999999999999998643321  111    11


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                      .. .+.......        ...+..+.+++.+||..||++|||+.++++.|+.+.......+.|+.+|
T Consensus       255 ~~-~~~~~~~~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~~~~~~~~~  314 (319)
T 2y4i_B          255 MG-TGMKPNLSQ--------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSHPGHFW  314 (319)
T ss_dssp             HH-TTCCCCCCC--------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--------------
T ss_pred             hc-cCCCCCCCc--------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhccCCCCcccc
Confidence            11 111111110        1123457788888999999999999999999999999988889998877

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.95  E-value=5.8e-29  Score=199.95  Aligned_cols=189  Identities=22%  Similarity=0.243  Sum_probs=134.8

Q ss_pred             hcCccccCccccccccceEee----CC-------CEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           35 TDNFSMENKLGEGGFGPGKLL----NG-------EQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~----~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      .++|++.+.||+|+||.+++.    ++       ..||+|.+........+.+.+|+.+++.++||||+++++++.+.+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            467999999999999996552    23       4699999987666777889999999999999999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccce--------------------------------------------eee--
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTR--------------------------------------------VRI--  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~--------------------------------------------~~i--  137 (253)
                      .++||||+.+|+|.+++......  +++...                                            ..+  
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGG--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             CEEEEECCCCCCHHHHHHhCCCC--CCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence            99999999999999988432110  111110                                            011  


Q ss_pred             -----------------------eeec-CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 -----------------------YALH-GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 -----------------------~~~~-~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                             .... ..++.++|||||||++|||++|+.|+........ ...    ......... 
T Consensus       165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~----~~~~~~~~~-  238 (289)
T 4fvq_A          165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KLQ----FYEDRHQLP-  238 (289)
T ss_dssp             CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHH----HHHTTCCCC-
T ss_pred             CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HHH----HhhccCCCC-
Confidence                                   1111 4578899999999999999997666543322111 110    001111110 


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                                 ...+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus       239 -----------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p  276 (289)
T 4fvq_A          239 -----------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP  276 (289)
T ss_dssp             -----------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred             -----------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence                       01123466778889999999999999999999999843

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.95  E-value=2.5e-28  Score=202.18  Aligned_cols=187  Identities=17%  Similarity=0.156  Sum_probs=132.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccccc------ccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG------QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .+.|++.+.||+|+||.+++    .+++.||+|++.....      ...+.+.+|+.+++.++||||+++++++.+.+.+
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            46799999999999999655    4689999999975421      2357899999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCc-------------------------------CC--CCccc----eeee----------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK-------------------------------GR--LGWGT----RVRI----------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~-------------------------------~~--~~~~~----~~~i----------  137 (253)
                      ++||||+++|+|.+++......                               ..  +.-..    .+.+          
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~  170 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence            9999999999999987432100                               00  00000    0111          


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                        ......|+.++|||||||++|+|++|..||.....  ......+    . ....      ..
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~~~~~~i----~-~~~~------~~  237 (361)
T 2yab_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANI----T-AVSY------DF  237 (361)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH----H-TTCC------CC
T ss_pred             CCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-hcCC------CC
Confidence                              12234578899999999999999999999864322  1111111    0 0100      00


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ........+..+.+++.+||..||++|||+.++++
T Consensus       238 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          238 DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00011123456788999999999999999999885

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=9.4e-28  Score=201.38  Aligned_cols=206  Identities=16%  Similarity=0.140  Sum_probs=143.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC--eeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG--VKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~--~~~lv  107 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            35799999999999999655    45889999999754 2345677899999999999999999999998754  78999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||||.+|+|.+++........+++.....+                                                  
T Consensus        88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~  167 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (396)
T ss_dssp             ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred             EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence            999999999999854322111111111111                                                  


Q ss_pred             ------------------eee--------cCccccccceeehhHHHHHHHhCCCCcCcCCCCC--cchhhhhhHhhhcCC
Q 043709          138 ------------------YAL--------HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS--LTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ------------------~~~--------~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~--~~~~~~~~~~~~~~~  189 (253)
                                        ...        ...++.++|||||||++|||++|..||.......  ......+.... ...
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~-p~~  246 (396)
T 4eut_A          168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK-PSG  246 (396)
T ss_dssp             CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC-CTT
T ss_pred             CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC-Ccc
Confidence                              000        1345678999999999999999999997544322  22222111110 000


Q ss_pred             Cccccc-----------cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          190 SLWDLM-----------DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       190 ~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ......           ...............+.+++.+||+.||++||++.++++.+.+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          247 AISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             CCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             cchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            000000           0011123335677788899999999999999999999999998874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.2e-28  Score=198.06  Aligned_cols=197  Identities=23%  Similarity=0.348  Sum_probs=141.7

Q ss_pred             hcCccccC-ccccccccceEe------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMEN-KLGEGGFGPGKL------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~-~ig~G~fg~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|.+.+ .||+|+||.++.      .++..||||++... .....+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l   86 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML   86 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence            45677776 999999999654      25778999999865 344567899999999999999999999999 5567999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+.+|+|.+++.....  .+++.....+                                                 
T Consensus        87 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~  164 (287)
T 1u59_A           87 VMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD  164 (287)
T ss_dssp             EEECCTTEEHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred             EEEeCCCCCHHHHHHhCCc--cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence            9999999999999843211  1222111111                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++||||||+++|||++ |..||.....  ......+     ..+.       
T Consensus       165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i-----~~~~-------  230 (287)
T 1u59_A          165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFI-----EQGK-------  230 (287)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHH-----HTTC-------
T ss_pred             ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH-----hcCC-------
Confidence                               0112346778999999999999998 9999864332  1111111     1111       


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSA  250 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~  250 (253)
                        ....+...+..+.+++.+||+.||++||++.++++.|+.+..+...+..+.
T Consensus       231 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~~  281 (287)
T 1u59_A          231 --RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGH  281 (287)
T ss_dssp             --CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSSC
T ss_pred             --cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcccCC
Confidence              111122344678889999999999999999999999999987777666553

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=3.1e-29  Score=202.79  Aligned_cols=193  Identities=24%  Similarity=0.343  Sum_probs=133.0

Q ss_pred             cCccccCccccccccceEe--------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec--Cee
Q 043709           36 DNFSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK--GVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~--~~~  104 (253)
                      +.|++.+.||+|+||.+++        .+++.||+|++... .....+.+.+|+.+++.++||||+++++++...  +.+
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4589999999999999654        36889999999754 345567899999999999999999999999876  668


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      +++|||+++|+|.+++.....  .+++.....+                                               
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  178 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  178 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             EEEEEeCCCCcHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence            999999999999999832211  1111111111                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC---------CcchhhhhhHhhhc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN---------SLTLLGYVIWNLWN  187 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~---------~~~~~~~~~~~~~~  187 (253)
                                           ......++.++||||||+++|||++|..|+......         ........ ...  
T Consensus       179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~--  255 (302)
T 4e5w_A          179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL-VNT--  255 (302)
T ss_dssp             TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH-HHH--
T ss_pred             CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH-HHH--
Confidence                                 112234667899999999999999999885422110         00000011 000  


Q ss_pred             CCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          188 DGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                             .........+...+..+.+++.+||+.||.+|||+.++++.|++++
T Consensus       256 -------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          256 -------LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             -------HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -------HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence                   1111111222334467888999999999999999999999999875

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=1.1e-29  Score=207.23  Aligned_cols=201  Identities=24%  Similarity=0.362  Sum_probs=143.7

Q ss_pred             cccHHHHHHHhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceE
Q 043709           25 FFSLASISAATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRI   94 (253)
Q Consensus        25 ~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~   94 (253)
                      .+..+++....++|++.+.||+|+||.+++         .+++.||||.+... .......+.+|+.+++.++||||+++
T Consensus        14 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   93 (322)
T 1p4o_A           14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL   93 (322)
T ss_dssp             CCCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCE
T ss_pred             ccChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeee
Confidence            355567777788999999999999999665         24678999999754 33445679999999999999999999


Q ss_pred             eEEEEecCeeEEEEeeCCCCChhhhccCCCC-------cCCCCccceeee------------------------------
Q 043709           95 IGCCVEKGVKILIYEHMPNKSLDYFLFDPAN-------KGRLGWGTRVRI------------------------------  137 (253)
Q Consensus        95 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~~~~~~~~~i------------------------------  137 (253)
                      ++++.+.+..++||||+.+|+|.+++.....       .....+.....+                              
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~  173 (322)
T 1p4o_A           94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE  173 (322)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT
T ss_pred             EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcC
Confidence            9999999999999999999999998743110       000111111110                              


Q ss_pred             -------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhh
Q 043709          138 -------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLG  179 (253)
Q Consensus       138 -------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~  179 (253)
                                                           ......++.++|||||||++|||++ |..||.....  .....
T Consensus       174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~  251 (322)
T 1p4o_A          174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVLR  251 (322)
T ss_dssp             TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--HHHHH
T ss_pred             CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--HHHHH
Confidence                                                 1123457788999999999999999 7777754321  11111


Q ss_pred             hhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          180 YVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .+    . .+...         ......+..+.+++.+||+.||++|||+.++++.|++...
T Consensus       252 ~~----~-~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          252 FV----M-EGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HH----H-TTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HH----H-cCCcC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            11    1 11111         1112334567889999999999999999999999998864

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.95  E-value=1.8e-28  Score=203.37  Aligned_cols=186  Identities=18%  Similarity=0.225  Sum_probs=133.5

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ...++|++.+.||+|+||.+++    .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            3456899999999999999655    46889999999754  33455779999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccce---------------------------------------eee----------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTR---------------------------------------VRI----------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~---------------------------------------~~i----------  137 (253)
                      ||||+.+|+|.+++.....   ++....                                       ..+          
T Consensus       106 v~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVAREF---YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             EECCCCSCBHHHHHTTCSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred             EEecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence            9999999999887732210   000000                                       001          


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                        ......|+.++|||||||++|+|++|..||.....  ..+...+    . .+.. ..     
T Consensus       183 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i----~-~~~~-~~-----  249 (362)
T 2bdw_A          183 DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQI----K-AGAY-DY-----  249 (362)
T ss_dssp             TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-HTCC-CC-----
T ss_pred             CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----H-hCCC-CC-----
Confidence                              12233588899999999999999999999864322  1111111    0 0100 00     


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ........+..+.+++.+||..||++||++.++++
T Consensus       250 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            01111233467888999999999999999999884

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.95  E-value=1e-28  Score=196.76  Aligned_cols=190  Identities=23%  Similarity=0.343  Sum_probs=130.8

Q ss_pred             hcCccccCccccccccceEe--eCCCEEEEEEecccc----cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQS----GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .++|++.+.||+|+||.+++  ..++.||||++....    ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            46899999999999999655  568999999997542    334578999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCc---------------------C-------CCCc---------------cceeee--------
Q 043709          109 EHMPNKSLDYFLFDPANK---------------------G-------RLGW---------------GTRVRI--------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~---------------------~-------~~~~---------------~~~~~i--------  137 (253)
                      ||+.+|+|.+++......                     +       .+..               .....+        
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~  165 (271)
T 3dtc_A           86 EFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE  165 (271)
T ss_dssp             ECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred             EcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence            999999998887321100                     0       0000               000111        


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         ......++.++||||||+++|+|++|..||.......  ..    .......         
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~----~~~~~~~---------  230 (271)
T 3dtc_A          166 WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA--VA----YGVAMNK---------  230 (271)
T ss_dssp             ----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH--HH----HHHHTSC---------
T ss_pred             cccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH----HhhhcCC---------
Confidence                               1123347889999999999999999999986433211  11    1111111         


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      .........+..+.+++.+||+.||.+|||+.++++.|+.+
T Consensus       231 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          231 LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            11111223345788899999999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.95  E-value=9.5e-29  Score=202.89  Aligned_cols=195  Identities=22%  Similarity=0.368  Sum_probs=139.6

Q ss_pred             HHHhcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           32 SAATDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      ....++|++.+.||+|+||.+++.           ++..||||++... .....+.+.+|+.+++.+ +||||+++++++
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            345678999999999999996652           4568999999765 344567899999999999 899999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCcC-------------CCCccceeee----------------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANKG-------------RLGWGTRVRI----------------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------------~~~~~~~~~i----------------------------  137 (253)
                      ...+..++||||+.+|+|.+++.......             .+.+.....+                            
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV  190 (334)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence            99999999999999999999986533210             1111111111                            


Q ss_pred             ---------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcch
Q 043709          138 ---------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTL  177 (253)
Q Consensus       138 ---------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~  177 (253)
                                                             ......++.++|||||||++|||++ |..||.....  ..+
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~  268 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EEL  268 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHH
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH--HHH
Confidence                                                   0112346788999999999999999 8888764322  111


Q ss_pred             hhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          178 LGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      ...+    . .+.         ........+..+.+++.+||..||.+|||+.++++.|+.+...
T Consensus       269 ~~~~----~-~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          269 FKLL----K-EGH---------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             HHHH----H-HTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHH----h-cCC---------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            1111    0 010         0111123345678889999999999999999999999998743

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.95  E-value=7.9e-30  Score=205.39  Aligned_cols=201  Identities=22%  Similarity=0.299  Sum_probs=140.2

Q ss_pred             HHHHHhcCccccC-ccccccccceEee------CCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           30 SISAATDNFSMEN-KLGEGGFGPGKLL------NGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        30 ~l~~~~~~~~~~~-~ig~G~fg~~~~~------~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      ++....++|.+.+ .||+|+||.+++.      .++.||||++....  ....+.+.+|+.+++.++||||+++++++ .
T Consensus        10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E   88 (291)
T ss_dssp             -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred             eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence            3344556788888 9999999996553      46789999997542  33467899999999999999999999999 5


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+..++||||+.+|+|.+++.....   ++......+                                           
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  165 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSK  165 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCcC---CCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence            6778999999999999998843211   111111100                                           


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                               ......++.++||||||+++|||++ |..||.....  ......+     ..+. 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~-----~~~~-  237 (291)
T 1xbb_A          166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAML-----EKGE-  237 (291)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH-----HTTC-
T ss_pred             eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH-----HcCC-
Confidence                                     0112346778999999999999999 9998864332  1111111     1111 


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCC
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSA  250 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~  250 (253)
                              ....+...+..+.+++.+||+.||.+|||+.++++.|+++......+++|.
T Consensus       238 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~  288 (291)
T 1xbb_A          238 --------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEGHHH  288 (291)
T ss_dssp             --------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred             --------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhccccc
Confidence                    111122344678889999999999999999999999999986665554443

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.95  E-value=5.8e-29  Score=202.38  Aligned_cols=202  Identities=23%  Similarity=0.335  Sum_probs=143.7

Q ss_pred             cccHHHHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcce
Q 043709           25 FFSLASISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVR   93 (253)
Q Consensus        25 ~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~   93 (253)
                      .+...++....++|++.+.||+|+||.+++.         +++.||||++... .....+.+.+|+.+++.+ +||||++
T Consensus        16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~   95 (316)
T 2xir_A           16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   95 (316)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence            3566677778889999999999999996542         4578999999765 334456799999999999 7999999


Q ss_pred             EeEEEEecC-eeEEEEeeCCCCChhhhccCCCCcC-------------CCCccceeee----------------------
Q 043709           94 IIGCCVEKG-VKILIYEHMPNKSLDYFLFDPANKG-------------RLGWGTRVRI----------------------  137 (253)
Q Consensus        94 ~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~-------------~~~~~~~~~i----------------------  137 (253)
                      +++++...+ ..+++|||+++|+|.+++.......             .+++.....+                      
T Consensus        96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik  175 (316)
T 2xir_A           96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA  175 (316)
T ss_dssp             EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCc
Confidence            999998754 5899999999999999986533210             0111000000                      


Q ss_pred             ---------------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCC
Q 043709          138 ---------------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYN  171 (253)
Q Consensus       138 ---------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~  171 (253)
                                                                   ......++.++|||||||++|||++ |..||....
T Consensus       176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  255 (316)
T 2xir_A          176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  255 (316)
T ss_dssp             GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence                                                         1123446789999999999999998 888876443


Q ss_pred             CCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          172 TNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ... ......    . .+..         .......+..+.+++.+||+.||.+|||+.++++.|++++.
T Consensus       256 ~~~-~~~~~~----~-~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  310 (316)
T 2xir_A          256 IDE-EFCRRL----K-EGTR---------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  310 (316)
T ss_dssp             CSH-HHHHHH----H-HTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhH-HHHHHh----c-cCcc---------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            221 111111    0 0100         11111233567888999999999999999999999998874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.95  E-value=3.1e-29  Score=200.99  Aligned_cols=193  Identities=24%  Similarity=0.339  Sum_probs=136.4

Q ss_pred             HHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .+....++|++.+.||+|+||.++.   .++..||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             TTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             CccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence            3445567899999999999999654   456689999998543 334679999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+.+|+|.+++.....  .+++.....+                                                 
T Consensus        97 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  174 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  174 (283)
T ss_dssp             EECCCTTCBHHHHHHCGGG--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred             EEeccCCCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence            9999999999998854111  1111111111                                                 


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                       ......++.++||||||+++|||++ |..||......  .....+    ...          .
T Consensus       175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~----~~~----------~  238 (283)
T 3gen_A          175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHI----AQG----------L  238 (283)
T ss_dssp             HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHH----HTT----------C
T ss_pred             cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHH----hcc----------c
Confidence                             1123457789999999999999998 88887643321  111111    100          0


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ....+......+.+++.+||+.+|++|||+.++++.|+++..
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          239 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            011111223567788899999999999999999999998874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=2.3e-28  Score=196.69  Aligned_cols=199  Identities=21%  Similarity=0.316  Sum_probs=138.2

Q ss_pred             HHHHHHhcCccccCccccccccceEe-eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           29 ASISAATDNFSMENKLGEGGFGPGKL-LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        29 ~~l~~~~~~~~~~~~ig~G~fg~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      .......++|++.+.||+|+||.+++ .....||+|++...  .....+.+.+|+.+++.++||||+++++++ ..+..+
T Consensus        17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~   95 (289)
T 3og7_A           17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLA   95 (289)
T ss_dssp             -CCBCCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCE
T ss_pred             CCCccCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccE
Confidence            33445567899999999999999776 34567999999754  344557899999999999999999999965 456789


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +||||+.+++|.+++.....  .+++.....+                                                
T Consensus        96 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  173 (289)
T 3og7_A           96 IVTQWCEGSSLYHHLHASET--KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW  173 (289)
T ss_dssp             EEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred             EEEEecCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccc
Confidence            99999999999988843221  1111111111                                                


Q ss_pred             -------------------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 -------------------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 -------------------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                         ..   ....++.++||||||+++|||++|..||....... .+.... .    .+......
T Consensus       174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~-~----~~~~~~~~  247 (289)
T 3og7_A          174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMV-G----RGSLSPDL  247 (289)
T ss_dssp             ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHH-H----HTSCCCCT
T ss_pred             cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHh-c----ccccCcch
Confidence                               00   13456778999999999999999999986543221 111111 1    11111100


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                           ......++..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus       248 -----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          248 -----SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             -----TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             -----hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence                 11112334678889999999999999999999999998864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.95  E-value=7.1e-28  Score=201.20  Aligned_cols=185  Identities=17%  Similarity=0.174  Sum_probs=135.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .+.|++.+.||+|+||.+++    .+++.||+|++..........+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            45799999999999999665    46889999999866555567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCcccee--------------------------------------ee---------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRV--------------------------------------RI---------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~--------------------------------------~i---------------  137 (253)
                      +.+|+|.+++.....  .+++....                                      .+               
T Consensus       130 ~~gg~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  207 (387)
T 1kob_A          130 LSGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  207 (387)
T ss_dssp             CCCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCCCcHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence            999999998843211  11111100                                      00               


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|||||||++|||++|..||.....  ......+    .. ...      .......
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i----~~-~~~------~~~~~~~  274 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNV----KR-CDW------EFDEDAF  274 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH----HH-CCC------CCCSSTT
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHH----Hh-CCC------CCCcccc
Confidence                         12234578899999999999999999999864322  1111111    00 000      0111111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+..+.+++.+||..||.+|||+.++++
T Consensus       275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            234467889999999999999999999986

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=2.9e-29  Score=204.93  Aligned_cols=199  Identities=21%  Similarity=0.376  Sum_probs=132.5

Q ss_pred             HHHHHhcCccccCccccccccceEee----CC---CEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL----NG---EQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~----~~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      ++....++|++.+.||+|+||.+++.    ++   ..||||++...  .....+.+.+|+.+++.++||||+++++++..
T Consensus        17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            44455678999999999999996652    22   27999999764  34556789999999999999999999999987


Q ss_pred             cCee------EEEEeeCCCCChhhhccCCCCc---CCCCccceeee----------------------------------
Q 043709          101 KGVK------ILIYEHMPNKSLDYFLFDPANK---GRLGWGTRVRI----------------------------------  137 (253)
Q Consensus       101 ~~~~------~lv~e~~~~g~L~~~l~~~~~~---~~~~~~~~~~i----------------------------------  137 (253)
                      .+..      +++|||+.+|+|.+++......   ..+++.....+                                  
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~  176 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTV  176 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCE
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCE
Confidence            6554      9999999999999887421100   01111111111                                  


Q ss_pred             ---------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhH
Q 043709          138 ---------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIW  183 (253)
Q Consensus       138 ---------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~  183 (253)
                                                       ......++.++|||||||++|||++ |..||......  ......  
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~--  252 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYNYL--  252 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH--
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHHHH--
Confidence                                             1123347889999999999999999 78887643321  111111  


Q ss_pred             hhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          184 NLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                        . .+.         ........+..+.+++.+||+.||.+|||+.++++.|++++....
T Consensus       253 --~-~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          253 --I-GGN---------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             --H-TTC---------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             --h-cCC---------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence              1 111         011112334578889999999999999999999999999985544

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=5.1e-29  Score=200.21  Aligned_cols=194  Identities=24%  Similarity=0.313  Sum_probs=141.5

Q ss_pred             HHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ++....++|++.+.||+|+||.++.    .++..||+|.+... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus         7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A            7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            3445667899999999999999655    45788999999753 345678999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +||||+.+|+|.+++..... ..+++.....+                                                
T Consensus        86 ~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  164 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  164 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred             EEEEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence            99999999999999853221 11222111111                                                


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++||||||+++|+|++ |..||......  ......              ...
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~--------------~~~  228 (288)
T 3kfa_A          165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELL--------------EKD  228 (288)
T ss_dssp             SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH--------------HTT
T ss_pred             ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH--------------hcc
Confidence                              1122456789999999999999999 88887643321  111111              011


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .........+..+.+++.+||..||.+|||+.++++.|+.+..
T Consensus       229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence            1111222334678889999999999999999999999988764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=1.5e-28  Score=195.57  Aligned_cols=189  Identities=24%  Similarity=0.313  Sum_probs=135.8

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..++|++.+.||+|+||.+++   .++..||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY   84 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence            356899999999999999554   456689999997543 3446799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++.....  .+++.....+                                                     
T Consensus        85 ~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  162 (268)
T 3sxs_A           85 ISNGCLLNYLRSHGK--GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS  162 (268)
T ss_dssp             CTTCBHHHHHHHHGG--GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred             cCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence            999999998743211  0111111111                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++||||||+++|||++ |..||......  ......    ....   ....       
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~----~~~~---~~~~-------  226 (268)
T 3sxs_A          163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKV----SQGH---RLYR-------  226 (268)
T ss_dssp             CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHH----HTTC---CCCC-------
T ss_pred             cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHHHH----HcCC---CCCC-------
Confidence                         1112346789999999999999999 88887643321  111111    1000   0011       


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      +...+..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            11123467788889999999999999999999998864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.95  E-value=2.3e-28  Score=200.01  Aligned_cols=188  Identities=22%  Similarity=0.339  Sum_probs=129.7

Q ss_pred             hcCccccCccccccccceEe----eCCCE----EEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQ----VAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      .++|++.+.||+|+||.+++    .+++.    ||+|.+... .....+.+.+|+.+++.++||||+++++++...+ .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~   92 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence            35799999999999999665    23443    588888644 3456678999999999999999999999998754 78


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++++|+.+|+|.+++.....  .+++.....+                                                
T Consensus        93 ~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~  170 (327)
T 3poz_A           93 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEEECCTTCBHHHHHHHSTT--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred             EEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence            99999999999998854221  1121111111                                                


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++|||++ |..||.......  +....     ..+        
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~-----~~~--------  235 (327)
T 3poz_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSIL-----EKG--------  235 (327)
T ss_dssp             CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHH-----HTT--------
T ss_pred             cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHH-----HcC--------
Confidence                               1223457889999999999999999 898886443221  11111     011        


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                       .........+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus       236 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          236 -ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             -CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             -CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence             1111122234568889999999999999999999999988764

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.95  E-value=6.6e-28  Score=201.84  Aligned_cols=203  Identities=14%  Similarity=0.149  Sum_probs=134.2

Q ss_pred             hcCccccCccccc--cccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEG--GFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G--~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|++.+.||+|  +||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++.+.+.+++
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  103 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV  103 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence            4679999999999  9998554    46899999999754  24445678899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |||||.+|+|.+++...... .+.......+                                                 
T Consensus       104 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~  182 (389)
T 3gni_B          104 VTSFMAYGSAKDLICTHFMD-GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG  182 (389)
T ss_dssp             EEECCTTCBHHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred             EEEccCCCCHHHHHhhhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence            99999999999987432111 1111111100                                                 


Q ss_pred             -----------------------eeec--CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc----C
Q 043709          138 -----------------------YALH--GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN----D  188 (253)
Q Consensus       138 -----------------------~~~~--~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~----~  188 (253)
                                             .+..  ..++.++|||||||++|||++|..||......... .... .....    .
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~~-~~~~~~~~~~  260 (389)
T 3gni_B          183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEKL-NGTVPCLLDT  260 (389)
T ss_dssp             EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC------------
T ss_pred             ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHh-cCCCCccccc
Confidence                                   1111  45788999999999999999999998754433211 1100 00000    0


Q ss_pred             -----CC-------------ccccc---------cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--Hhhc
Q 043709          189 -----GS-------------LWDLM---------DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNE  239 (253)
Q Consensus       189 -----~~-------------~~~~~---------~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~  239 (253)
                           ..             .....         ...............+.+|+.+||+.||++|||++++++.  ++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~  340 (389)
T 3gni_B          261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  340 (389)
T ss_dssp             ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred             cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence                 00             00000         0000001122334568889999999999999999999853  5444


Q ss_pred             c
Q 043709          240 I  240 (253)
Q Consensus       240 ~  240 (253)
                      .
T Consensus       341 ~  341 (389)
T 3gni_B          341 K  341 (389)
T ss_dssp             -
T ss_pred             h
Confidence            3

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.94  E-value=3.8e-28  Score=213.94  Aligned_cols=188  Identities=23%  Similarity=0.348  Sum_probs=134.9

Q ss_pred             CccccC-ccccccccceEee------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           37 NFSMEN-KLGEGGFGPGKLL------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        37 ~~~~~~-~ig~G~fg~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++.+.+ .||+|+||.+++.      ++..||||+++.. .....+.+.+|+.+|+.++||||+++++++.. +.+++||
T Consensus       336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~  414 (613)
T 2ozo_A          336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM  414 (613)
T ss_dssp             SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred             ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence            334444 7999999996642      4567999999865 34467889999999999999999999999976 5689999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+.+|+|.+++.....  .+++.....+                                                   
T Consensus       415 E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~  492 (613)
T 2ozo_A          415 EMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY  492 (613)
T ss_dssp             ECCTTCBHHHHHTTCTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred             EeCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence            99999999999853221  1222211111                                                   


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                       .+....++.++|||||||++|||++ |..||.....  ..+...+     ..+         .
T Consensus       493 ~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i-----~~~---------~  556 (613)
T 2ozo_A          493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFI-----EQG---------K  556 (613)
T ss_dssp             ---------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHHH-----HTT---------C
T ss_pred             eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHH-----HcC---------C
Confidence                             1123457889999999999999998 9999865432  2222111     111         1


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCC
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL  243 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~  243 (253)
                      +...+..++..+.+++.+||..||++||++.+|++.|+.+....
T Consensus       557 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          557 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            11222234567888999999999999999999999999876443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.94  E-value=1.7e-28  Score=202.63  Aligned_cols=185  Identities=12%  Similarity=0.095  Sum_probs=126.0

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ...+.|++.+.||+|+||.+++    .+++.||||++....  ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            3456799999999999999665    457899999997542  3456889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccce---------------------------------------eee------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTR---------------------------------------VRI------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~---------------------------------------~~i------------  137 (253)
                      ||+++|+|.+++.....   +++...                                       ..+            
T Consensus       128 e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  204 (349)
T 2w4o_A          128 ELVTGGELFDRIVEKGY---YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ  204 (349)
T ss_dssp             CCCCSCBHHHHHTTCSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred             EeCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence            99999999888743211   111100                                       000            


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ......++.++|||||||++|||++|..||........ ....+    . .... ..     ..
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~i----~-~~~~-~~-----~~  272 (349)
T 2w4o_A          205 VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-MFRRI----L-NCEY-YF-----IS  272 (349)
T ss_dssp             --------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-HHHHH----H-TTCC-CC-----CT
T ss_pred             cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-HHHHH----H-hCCC-cc-----CC
Confidence                            11233578899999999999999999999864332211 11111    1 1100 00     01


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+..+.+++.+||+.||++|||+.++++
T Consensus       273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111234457888999999999999999999986

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.94  E-value=3.8e-28  Score=198.69  Aligned_cols=183  Identities=20%  Similarity=0.192  Sum_probs=130.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccccc------ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG------QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      +.|++.+.||+|+||.+++    .+++.||+|++.....      ...+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4699999999999999655    4689999999975421      24678999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccc----------------------------------------eeee--------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGT----------------------------------------RVRI--------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~----------------------------------------~~~i--------  137 (253)
                      +||||+++|+|.+++.....   ++...                                        ...+        
T Consensus        91 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKES---LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSC---CBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCCHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence            99999999999998843211   00000                                        0011        


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          ......++.++|||||||++|+|++|..||.....  ......+ ..  ....       
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~~-~~--~~~~-------  235 (326)
T 2y0a_A          168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANV-SA--VNYE-------  235 (326)
T ss_dssp             CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH-HH--TCCC-------
T ss_pred             CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHH-Hh--cCCC-------
Confidence                                11234578899999999999999999999864322  1111111 00  0000       


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       .........+..+.+++.+||..||++|||+.++++
T Consensus       236 -~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          236 -FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             -CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             000001122356778899999999999999999986

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.94  E-value=4.1e-29  Score=204.37  Aligned_cols=195  Identities=24%  Similarity=0.351  Sum_probs=137.0

Q ss_pred             hcCccccCccccccccceEe--------eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecC--ee
Q 043709           35 TDNFSMENKLGEGGFGPGKL--------LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG--VK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~--~~  104 (253)
                      .++|++.+.||+|+||.+++        .+++.||||++........+.+.+|+.+++.++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            45799999999999999654        358899999998766666788999999999999999999999987653  78


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+++|+|.+++.....  .+++.....+                                               
T Consensus       120 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  197 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHSTT--SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred             EEEEECCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence            999999999999999854221  1121111111                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC---------C-cchhhhhhHhhh
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN---------S-LTLLGYVIWNLW  186 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~---------~-~~~~~~~~~~~~  186 (253)
                                           ......++.++|||||||++|||++|..|+......         . ....... ... 
T Consensus       198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  275 (326)
T 2w1i_A          198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL-IEL-  275 (326)
T ss_dssp             SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH-HHH-
T ss_pred             cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH-HHH-
Confidence                                 011223678899999999999999999887532110         0 0000000 001 


Q ss_pred             cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          187 NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                              ............++..+.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus       276 --------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~  322 (326)
T 2w1i_A          276 --------LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD  322 (326)
T ss_dssp             --------HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --------hhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                    11111111122344678889999999999999999999999998764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.94  E-value=8.8e-28  Score=192.94  Aligned_cols=189  Identities=22%  Similarity=0.366  Sum_probs=132.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccccc-------ccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG-------QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++.....       ...+.+.+|+.+++.++||||+++++++.+..  
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence            6799999999999999654    4789999999965422       11267899999999999999999999987654  


Q ss_pred             EEEEeeCCCCChhhhccCCCCc-----------------------C--C----CCccc------------eeee------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK-----------------------G--R----LGWGT------------RVRI------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~-----------------------~--~----~~~~~------------~~~i------  137 (253)
                      +++|||+.+|+|.+++......                       +  .    +...-            ...+      
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~  176 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS  176 (287)
T ss_dssp             EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTC
T ss_pred             eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcc
Confidence            7999999999997776321110                       0  0    00000            0111      


Q ss_pred             --------------------ee--ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 --------------------YA--LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 --------------------~~--~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                          ..  ....++.++|||||||++|||++|..||..............    ...       
T Consensus       177 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~----~~~-------  245 (287)
T 4f0f_A          177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI----REE-------  245 (287)
T ss_dssp             BCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH----HHS-------
T ss_pred             ccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH----hcc-------
Confidence                                11  234467899999999999999999999875543322222111    000       


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                        ..........+..+.+++.+||+.||.+|||++++++.|+++
T Consensus       246 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          246 --GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             --CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             --CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence              111112223346788899999999999999999999999864

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.94  E-value=5e-28  Score=205.45  Aligned_cols=188  Identities=18%  Similarity=0.217  Sum_probs=131.0

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ..++|++.+.||+|+||.+++    .+++.+|+|++...  .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A            9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            456899999999999999654    57899999999754  234456789999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCC-------------------------------cCCCCcc-----ceeee--------------
Q 043709          108 YEHMPNKSLDYFLFDPAN-------------------------------KGRLGWG-----TRVRI--------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~-------------------------------~~~~~~~-----~~~~i--------------  137 (253)
                      ||||.+|+|.+++.....                               ...+-..     ..+.+              
T Consensus        89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~  168 (444)
T 3soa_A           89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ  168 (444)
T ss_dssp             ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC
T ss_pred             EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc
Confidence            999999999877622110                               0000000     00011              


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     .+....|+.++||||+||++|+|++|..||.....  ..+...+    . .+.. ...     ..
T Consensus       169 ~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~i----~-~~~~-~~~-----~~  235 (444)
T 3soa_A          169 AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQI----K-AGAY-DFP-----SP  235 (444)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH----H-HTCC-CCC-----TT
T ss_pred             eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHHH----H-hCCC-CCC-----cc
Confidence                           12234688999999999999999999999864322  1121111    0 0100 011     11


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+..+.+++.+||+.||++|||+.++++
T Consensus       236 ~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          236 EWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            11233457888999999999999999999986

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.94  E-value=2.4e-28  Score=195.73  Aligned_cols=191  Identities=21%  Similarity=0.254  Sum_probs=136.0

Q ss_pred             HHHhcCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           32 SAATDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      ....++|++.+.||+|+||.+++.       .+..||+|.+... .....+.+.+|+.+++.++||||+++++++. .+.
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~   89 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP   89 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence            345578999999999999996652       2456999998754 3445678999999999999999999999984 567


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      .++||||+.+|+|.+++.....  .+++.....+                                              
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           90 VWIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             cEEEEecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccC
Confidence            8999999999999998853221  1121111111                                              


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                          ......++.++|||||||++|||++ |..||......  .....+    . ....     
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i----~-~~~~-----  235 (281)
T 1mp8_A          168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRI----E-NGER-----  235 (281)
T ss_dssp             -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH----H-TTCC-----
T ss_pred             cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHH----H-cCCC-----
Confidence                                1112456788999999999999997 88887643321  111111    1 1110     


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                          .......+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       236 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  276 (281)
T 1mp8_A          236 ----LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  276 (281)
T ss_dssp             ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                11122344678889999999999999999999999998864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.94  E-value=6.3e-28  Score=200.03  Aligned_cols=188  Identities=19%  Similarity=0.192  Sum_probs=127.8

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   97 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY   97 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence            46799999999999999554    478999999997543 3346788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCc-------------------------------CCCCc--cc--eeee------------------
Q 043709          111 MPNKSLDYFLFDPANK-------------------------------GRLGW--GT--RVRI------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~-------------------------------~~~~~--~~--~~~i------------------  137 (253)
                      +.+|+|.+++......                               ..+-.  ..  .+.+                  
T Consensus        98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  177 (361)
T 3uc3_A           98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST  177 (361)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCC
Confidence            9999998887321100                               00000  00  0111                  


Q ss_pred             ----------eeecCccc-cccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 ----------YALHGVFS-IKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 ----------~~~~~~~~-~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                .+....++ .++|||||||++|+|++|..||........ ..... .....         ..........
T Consensus       178 ~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~-~~~~~---------~~~~~~~~~~  246 (361)
T 3uc3_A          178 VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTI-QRILS---------VKYSIPDDIR  246 (361)
T ss_dssp             ---CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHH-HHHHT---------TCCCCCTTSC
T ss_pred             cCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHH-HHHhc---------CCCCCCCcCC
Confidence                      11223343 448999999999999999999875433221 11111 11111         0011111112


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+..+.+++.+||..||.+|||+.++++
T Consensus       247 ~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          247 ISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             CCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            3456788999999999999999999995

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.94  E-value=1.1e-28  Score=214.39  Aligned_cols=202  Identities=26%  Similarity=0.315  Sum_probs=143.8

Q ss_pred             HHHHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           28 LASISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      ...+....++|++.+.||+|+||.+++   ..+..||||++.... ...+.|.+|+.+|+.++||||+++++++.. +..
T Consensus       259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence            344556677899999999999999665   335679999998643 345789999999999999999999999876 678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+.+|+|.++++... ...+.+.....+                                               
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  415 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED  415 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred             eEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence            99999999999999984311 001111111111                                               


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         .+....++.++|||||||++|||++ |..||.....  .++...+    . .+        
T Consensus       416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i----~-~~--------  480 (535)
T 2h8h_A          416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV----E-RG--------  480 (535)
T ss_dssp             HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHH----H-TT--------
T ss_pred             CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----H-cC--------
Confidence                               1223457889999999999999999 8888764321  1111111    1 11        


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQ  248 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~  248 (253)
                       .+......++..+.+++.+||+.||++|||+++|++.|+++........+
T Consensus       481 -~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~  530 (535)
T 2h8h_A          481 -YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ  530 (535)
T ss_dssp             -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSSC
T ss_pred             -CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCcccC
Confidence             11111223446788899999999999999999999999999865544333

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.94  E-value=1.7e-27  Score=195.08  Aligned_cols=203  Identities=15%  Similarity=0.108  Sum_probs=140.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++....  ..+.+.+|+.+++.+ +||||+++++++...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            36799999999999999655    568899999997542  234688999999999 89999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccce-----------------------------------------eee-----------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTR-----------------------------------------VRI-----------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~-----------------------------------------~~i-----------  137 (253)
                      |+ +|+|.+++.....  .+++...                                         ..+           
T Consensus        86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A           86 LL-GPSLEDLFDLCDR--TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             eC-CCCHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence            99 8999998742110  0111100                                         001           


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-chhhhhhHhhhcCCCc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-TLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~  191 (253)
                                               ......++.++|||||||++|||++|..||........ .....+......    
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~----  238 (330)
T 2izr_A          163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA----  238 (330)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH----
T ss_pred             CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc----
Confidence                                     11223467899999999999999999999976543321 111111000000    


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                        .......    ...+ .+.+++..||+.||.+||++++|++.|+++......+..-.|.|
T Consensus       239 --~~~~~~~----~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw  293 (330)
T 2izr_A          239 --TPIEVLC----ENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW  293 (330)
T ss_dssp             --SCHHHHT----TTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTT
T ss_pred             --CCHHHHh----ccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccC
Confidence              0000000    0122 78888999999999999999999999999887665544444443

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.94  E-value=5.1e-27  Score=189.60  Aligned_cols=198  Identities=21%  Similarity=0.165  Sum_probs=132.1

Q ss_pred             HhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHh--ccCCCcceEeEEEEec----CeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAK--LQDINLVRIIGCCVEK----GVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~~~~~~~~~----~~~~  105 (253)
                      ..++|++.+.||+|+||.+++  .+++.||||++...   ....+..|.+++..  ++||||+++++++...    +.++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~   82 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW   82 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence            346899999999999999554  57899999999753   34556777777776  7899999999987643    4589


Q ss_pred             EEEeeCCCCChhhhccCCCCcCC------------CCccc--------eeee----------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGR------------LGWGT--------RVRI----------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~------------~~~~~--------~~~i----------------------------  137 (253)
                      +||||+++|+|.++++.......            +.+..        ...+                            
T Consensus        83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~  162 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM  162 (301)
T ss_dssp             EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence            99999999999998843210000            00000        0001                            


Q ss_pred             -------------------------eeecC------ccccccceeehhHHHHHHHhC----------CCCcCcCCCCCcc
Q 043709          138 -------------------------YALHG------VFSIKSDVFSFGVLLLETLSS----------KKNAHFYNTNSLT  176 (253)
Q Consensus       138 -------------------------~~~~~------~~~~~~DiwSlG~~l~ell~~----------~~p~~~~~~~~~~  176 (253)
                                               .....      .++.++|||||||++|||++|          ..||.........
T Consensus       163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~  242 (301)
T 3q4u_A          163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS  242 (301)
T ss_dssp             EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred             cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcc
Confidence                                     00111      344689999999999999999          7777554433322


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ..... .............    ........+..+.+++.+||+.||.+|||+.+|++.|+++
T Consensus       243 ~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          243 FEDMR-KVVCVDQQRPNIP----NRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHH-HHHTTSCCCCCCC----GGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhhh-HHHhccCCCCCCC----hhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            22111 1111111111111    1112235677899999999999999999999999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.94  E-value=8.5e-28  Score=205.44  Aligned_cols=185  Identities=18%  Similarity=0.247  Sum_probs=134.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|.+.+.||+|+||.+++    .+++.||||++...   ..+..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            5799999999999999655    47899999999754   2344578999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++....   .++......+                                                   
T Consensus        96 E~~~gg~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A           96 EYVSGGELFDYICKNG---RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             ECCSSEEHHHHTTSSS---SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred             eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence            9999999999984321   1111111111                                                   


Q ss_pred             -------------eeecCc-cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGV-FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~-~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ...+.. ++.++|||||||++|||++|..||.....  ..+...+    . .+..          ..
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~i----~-~~~~----------~~  235 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--PTLFKKI----C-DGIF----------YT  235 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--HHHHHHH----H-TTCC----------CC
T ss_pred             cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--HHHHHHH----h-cCCc----------CC
Confidence                         111122 36789999999999999999999864332  1111111    1 1110          01


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      +......+.+++.+||..||.+|||++++++  .+....
T Consensus       236 p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~  274 (476)
T 2y94_A          236 PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDL  274 (476)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred             CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence            1122356788999999999999999999995  566544

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=8e-28  Score=196.36  Aligned_cols=189  Identities=17%  Similarity=0.166  Sum_probs=134.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|.+... ....+.+.+|+.+++.++||||+++++++.+.+.+++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            46899999999999999665    46889999999753 33456788999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      |++|+|.+++.....  .+++.....+                                                     
T Consensus        83 ~~g~~L~~~l~~~~~--~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           83 ISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence            999999998843211  1111111000                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++|||||||++|+|++|..||.....  ......+    .... .      .......
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i----~~~~-~------~~~~~~~  227 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENI----MNAE-Y------TFDEEAF  227 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHH----HHTC-C------CCCHHHH
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHH----HcCC-C------CCChhhh
Confidence                         11223368899999999999999999999864322  1111111    1000 0      0000001


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                      ...+..+.+++.+||..||.+|||+.++++  .+.+.
T Consensus       228 ~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          228 KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            123457888999999999999999999995  45443

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.94  E-value=3.5e-28  Score=197.67  Aligned_cols=199  Identities=23%  Similarity=0.378  Sum_probs=134.8

Q ss_pred             HHHHHhcCccccCccccccccceEee-------CCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      ++....++|.+.+.||+|+||.++..       ++..||+|.+...  .....+.+.+|+.+++.++||||+++++++..
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  107 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE  107 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence            33455678999999999999996642       3457999999754  34445779999999999999999999999986


Q ss_pred             cC-----eeEEEEeeCCCCChhhhccCCC---CcCCCCccceeee-----------------------------------
Q 043709          101 KG-----VKILIYEHMPNKSLDYFLFDPA---NKGRLGWGTRVRI-----------------------------------  137 (253)
Q Consensus       101 ~~-----~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~i-----------------------------------  137 (253)
                      .+     ..+++|||+.+|+|.+++....   ....+++.....+                                   
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~k  187 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVC  187 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEE
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEE
Confidence            54     3599999999999999873211   1111222111111                                   


Q ss_pred             --------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHh
Q 043709          138 --------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 --------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                      ......++.++||||||+++|||++ |..||......  ......   
T Consensus       188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~---  262 (313)
T 3brb_A          188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYL---  262 (313)
T ss_dssp             ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH---
T ss_pred             EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHH---
Confidence                                            1122346788999999999999999 77777543321  111111   


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                       . .+.         ........+..+.+++.+||..||.+|||+.++++.|+++...+|
T Consensus       263 -~-~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          263 -L-HGH---------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             -H-TTC---------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             -H-cCC---------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence             1 110         111122334578889999999999999999999999999887654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.94  E-value=1.2e-28  Score=202.18  Aligned_cols=197  Identities=25%  Similarity=0.313  Sum_probs=138.6

Q ss_pred             HHHHHhcCccccCccccccccceEee----C-----CCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL----N-----GEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~----~-----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      ++....++|++.+.||+|+||.++..    +     ...||+|.+... .....+.+.+|+.+++.+ +||||+++++++
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            45556688999999999999996652    2     247999999765 344567799999999999 899999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCC-----------cCCCCccceeee------------------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPAN-----------KGRLGWGTRVRI------------------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~~~~~~~i------------------------------  137 (253)
                      ...+..++||||+++|+|.+++.....           ...+++.....+                              
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~  199 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN  199 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEG
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECC
Confidence            999999999999999999998743110           000111100000                              


Q ss_pred             -------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhh
Q 043709          138 -------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLG  179 (253)
Q Consensus       138 -------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~  179 (253)
                                                           ......++.++|||||||++|||++ |..||....... ....
T Consensus       200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~  278 (333)
T 2i1m_A          200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYK  278 (333)
T ss_dssp             GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHH
T ss_pred             CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHH
Confidence                                                 1123457789999999999999998 788876433221 1111


Q ss_pred             hhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          180 YVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .. ...             .....+...+..+.+++.+||+.||.+|||+.+|++.|++...
T Consensus       279 ~~-~~~-------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~  326 (333)
T 2i1m_A          279 LV-KDG-------------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ  326 (333)
T ss_dssp             HH-HHT-------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HH-hcC-------------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence            11 110             0011111223567888999999999999999999999998763

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.94  E-value=2.7e-28  Score=199.56  Aligned_cols=193  Identities=26%  Similarity=0.362  Sum_probs=135.8

Q ss_pred             HhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      ..++|++.+.||+|+||.+++         .++..||||.+... .......+.+|+.+++.++||||+++++++...+.
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            457899999999999999654         34668999999754 34455679999999999999999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCc----CCCCcccee---------------------------------------ee---
Q 043709          104 KILIYEHMPNKSLDYFLFDPANK----GRLGWGTRV---------------------------------------RI---  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~----~~~~~~~~~---------------------------------------~i---  137 (253)
                      .++||||+++|+|.+++......    ..+.+....                                       .+   
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Df  187 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDF  187 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcc
Confidence            99999999999999998543211    011111100                                       00   


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                                  ......++.++|||||||++|||++ |..||.....  ......+    . .
T Consensus       188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~----~-~  260 (327)
T 2yfx_A          188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFV----T-S  260 (327)
T ss_dssp             HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH----H-T
T ss_pred             ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHH----h-c
Confidence                                        1123457789999999999999998 8888754321  1111111    1 1


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      +..         .......+..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus       261 ~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          261 GGR---------MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCC---------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence            110         111122345678899999999999999999999999987643

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=3.1e-28  Score=199.83  Aligned_cols=189  Identities=20%  Similarity=0.294  Sum_probs=135.2

Q ss_pred             cCccccCccccccccceEee----C----CCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKLL----N----GEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~----~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ++|++.+.||+|+||.+++.    +    +..||||.+... .......+.+|+.+++.++||||+++++++...+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            46778899999999996652    1    235999999764 33445679999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+.+|+|.+++.....  .+++.....+                                                 
T Consensus       124 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  201 (333)
T 1mqb_A          124 ITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  201 (333)
T ss_dssp             EEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             EEeCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence            9999999999998843211  1111111111                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++|||++ |..||.....  ..+...+    ....        
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~----~~~~--------  267 (333)
T 1mqb_A          202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKAI----NDGF--------  267 (333)
T ss_dssp             ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH----HTTC--------
T ss_pred             ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH----HCCC--------
Confidence                               1123457788999999999999999 8988854322  1111111    1110        


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                        ........+..+.+++.+||+.||++||++.++++.|+++...
T Consensus       268 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          268 --RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             --CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             --cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence              0111123345678899999999999999999999999988744

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=9.5e-28  Score=193.63  Aligned_cols=204  Identities=16%  Similarity=0.120  Sum_probs=146.5

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++....  ..+.+.+|+.+++.+ +|+||+++++++......+++||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            46799999999999999554    568999999986532  334588999999999 79999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccce-----------------------------------------eee-----------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTR-----------------------------------------VRI-----------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~-----------------------------------------~~i-----------  137 (253)
                      |+ +|+|.+++......  +++...                                         ..+           
T Consensus        87 ~~-~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~  163 (298)
T 1csn_A           87 LL-GPSLEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  163 (298)
T ss_dssp             CC-CCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             ec-CCCHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence            99 89999988432110  111100                                         000           


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-chhhhhhHhhhcCCCc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-TLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~  191 (253)
                                               ......++.++|||||||++|||++|..||........ .....+..... ....
T Consensus       164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~  242 (298)
T 1csn_A          164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ-STPL  242 (298)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH-HSCH
T ss_pred             ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc-CccH
Confidence                                     11223467899999999999999999999976543321 11111101110 0000


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                           +..    ....+..+.+++.+||+.||++|||+++|++.|+++...+......+|.|
T Consensus       243 -----~~~----~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw  295 (298)
T 1csn_A          243 -----REL----CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDW  295 (298)
T ss_dssp             -----HHH----TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGG
T ss_pred             -----HHH----HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCcccc
Confidence                 000    11234578889999999999999999999999999998888877777877

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=6e-28  Score=196.08  Aligned_cols=197  Identities=15%  Similarity=0.097  Sum_probs=135.2

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|++.+.||+|+||.++.    .+++.||+|++....   ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            347899999999999999655    468899999997542   2334779999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+++++|.+++....   .+++.....+                                                 
T Consensus       112 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EEECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred             EEEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence            999999999999874211   0111100000                                                 


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       ......++.++||||||+++|||++|..||......  .+..    .........        
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~----~~~~~~~~~--------  254 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGA----HINQAIPRP--------  254 (309)
T ss_dssp             --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHH----HHHSCCCCG--------
T ss_pred             cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHH----HhccCCCCc--------
Confidence                             122345678999999999999999999998643321  1111    011111000        


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHhhcccCCCCCC
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRP-TMLEIVSMLSNEIVNLPYPQ  247 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RP-s~~~il~~L~~~~~~~~~~~  247 (253)
                      .......+..+.+++.+||+.||++|| +++++++.|+..+.......
T Consensus       255 ~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~  302 (309)
T 2h34_A          255 STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDR  302 (309)
T ss_dssp             GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC------
T ss_pred             cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccc
Confidence            111122345677888999999999999 89999999999886654433

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.94  E-value=3.9e-28  Score=192.93  Aligned_cols=189  Identities=24%  Similarity=0.351  Sum_probs=137.1

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ..++|++.+.||+|+||.++.   .+++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+.+..+++|||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            346899999999999999655   367789999998643 3447899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++.....  .+++.....+                                                     
T Consensus        85 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  162 (267)
T 3t9t_A           85 MEHGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  162 (267)
T ss_dssp             CTTCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCCCcHHHHHhhCcc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence            999999999853221  1111111111                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......++.++||||||+++|+|++ |..||.....  ......+    ....          ....
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~i----~~~~----------~~~~  226 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDI----STGF----------RLYK  226 (267)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH----HTTC----------CCCC
T ss_pred             ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHHHH----hcCC----------cCCC
Confidence                         1122446778999999999999999 7888764321  1111111    1110          0111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      +...+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            11233567888999999999999999999999998864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.94  E-value=1e-28  Score=197.61  Aligned_cols=201  Identities=25%  Similarity=0.317  Sum_probs=138.9

Q ss_pred             HHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ++....++|++.+.||+|+||.++.   ..+..||+|.+.... ...+.+.+|+.+++.++||||+++++++.. +..++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   84 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI   84 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence            4555668899999999999999655   356689999997543 345789999999999999999999999864 56899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+.+|+|.+++..... ..+++.....+                                                 
T Consensus        85 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (279)
T ss_dssp             EEECCTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             EEecCCCCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence            9999999999999843210 01111111111                                                 


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                       ......++.++||||||+++|||++ |..||.....  .......    ...          .
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~----~~~----------~  227 (279)
T 1qpc_A          164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNL----ERG----------Y  227 (279)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH----HTT----------C
T ss_pred             cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHHHHHH----hcc----------c
Confidence                             1112346778999999999999999 7888754322  1111111    111          0


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCC
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQS  249 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~  249 (253)
                      ........+..+.+++.+||..||++|||++++++.|+++........+|
T Consensus       228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~~  277 (279)
T 1qpc_A          228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP  277 (279)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC------
T ss_pred             CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCCCC
Confidence            01111233457888999999999999999999999999998665544443

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=7.8e-28  Score=194.12  Aligned_cols=193  Identities=23%  Similarity=0.239  Sum_probs=134.6

Q ss_pred             CccccCccccccccceEee----CCC---EEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee-EEE
Q 043709           37 NFSMENKLGEGGFGPGKLL----NGE---QVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK-ILI  107 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~~----~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~-~lv  107 (253)
                      .|...+.||+|+||.+++.    ++.   .+|+|.+... .....+.+.+|+.+++.++||||+++++++.+.+.. +++
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            4566789999999996652    333   7999999754 334567899999999999999999999999876554 999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+.+|+|.+++......  ..+.....+                                                  
T Consensus       102 ~e~~~~~~L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSPQRN--PTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             ECCCTTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             EecccCCCHHHHHhccccC--CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence            9999999999998542211  111111111                                                  


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         ......++.++|||||||++|+|++|+.|+...... .......    . ...        
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~----~-~~~--------  245 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFL----A-QGR--------  245 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHH----H-TTC--------
T ss_pred             cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHh----h-cCC--------
Confidence                               112234678999999999999999977765433221 1111111    0 110        


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCC
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYP  246 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~  246 (253)
                       ........+..+.+++.+||+.||.+|||+.++++.|+++...+...
T Consensus       246 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~  292 (298)
T 3pls_A          246 -RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD  292 (298)
T ss_dssp             -CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred             -CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence             01111223356788999999999999999999999999998766543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.94  E-value=6.2e-28  Score=193.78  Aligned_cols=185  Identities=17%  Similarity=0.251  Sum_probs=129.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|.+.+.||+|+||.+++    .++..+|+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4699999999999999664    46889999999765 344567899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCC-cCCCCccce---------------------------------------eee-------------
Q 043709          111 MPNKSLDYFLFDPAN-KGRLGWGTR---------------------------------------VRI-------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~-~~~~~~~~~---------------------------------------~~i-------------  137 (253)
                      +.+|+|.+++..... ...+++...                                       ..+             
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~  181 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE  181 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence            999999887622100 000110000                                       001             


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ....+.++.++||||||+++|||++|..||.......  .....   ........ .        .
T Consensus       182 ~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~---~~~~~~~~-~--------~  247 (285)
T 3is5_A          182 HSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKA---TYKEPNYA-V--------E  247 (285)
T ss_dssp             -----CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH---HHCCCCCC-C---------
T ss_pred             cCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhh---ccCCcccc-c--------c
Confidence                          1112346789999999999999999999986443211  11111   11011000 0        0


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .......+.+++.+||+.||++|||+.++++
T Consensus       248 ~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          248 CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             -CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0112356778899999999999999999985

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=1.1e-28  Score=202.26  Aligned_cols=199  Identities=17%  Similarity=0.180  Sum_probs=134.4

Q ss_pred             HHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEE-----
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCV-----   99 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~-----   99 (253)
                      .+.....+|++.+.||+|+||.+++    .+++.||||++........+.+.+|+.+++.+. ||||+++++++.     
T Consensus        22 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           22 TVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             EEEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTT
T ss_pred             eeeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccc
Confidence            3444456899999999999999655    478899999997666666778999999999996 999999999994     


Q ss_pred             ---ecCeeEEEEeeCCCCChhhhccCCCCcCCCCccce--------------------------------------eee-
Q 043709          100 ---EKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTR--------------------------------------VRI-  137 (253)
Q Consensus       100 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~--------------------------------------~~i-  137 (253)
                         .....+++|||+. |+|.+++........+++...                                      ..+ 
T Consensus       102 ~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~  180 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLC  180 (337)
T ss_dssp             STTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred             cccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEe
Confidence               3345899999997 688776632000000110000                                      000 


Q ss_pred             ----------------------------------------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCC
Q 043709          138 ----------------------------------------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS  174 (253)
Q Consensus       138 ----------------------------------------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~  174 (253)
                                                              ..   ....++.++|||||||++|||++|..||.......
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~  260 (337)
T 3ll6_A          181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR  260 (337)
T ss_dssp             CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence                                                    01   23456789999999999999999999986332210


Q ss_pred             cchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCC
Q 043709          175 LTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQ  248 (253)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~  248 (253)
                                         .................+.+++.+||+.||++|||+.++++.|+.+......+..
T Consensus       261 -------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~~~  315 (337)
T 3ll6_A          261 -------------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPK  315 (337)
T ss_dssp             ------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCCTT
T ss_pred             -------------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCCCCC
Confidence                               0000011111111123466788889999999999999999999999866554443

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=7.7e-28  Score=196.90  Aligned_cols=193  Identities=24%  Similarity=0.387  Sum_probs=136.2

Q ss_pred             cCccccCccccccccceEe----eCCCE--EEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQ--VAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ++|++.+.||+|+||.+++    .++..  +|+|.+... .....+.+.+|+.+++.+ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            6799999999999999655    45554  499998753 344556799999999999 899999999999999999999


Q ss_pred             EeeCCCCChhhhccCCC-------------CcCCCCccceeee-------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPA-------------NKGRLGWGTRVRI-------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i-------------------------------------  137 (253)
                      |||+++|+|.+++....             ....+++.....+                                     
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~  184 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  184 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence            99999999999986532             0011222111111                                     


Q ss_pred             ---------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCC
Q 043709          138 ---------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ---------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~  189 (253)
                                                 ......++.++|||||||++|||++ |..||......  .+....     ..+
T Consensus       185 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~-----~~~  257 (327)
T 1fvr_A          185 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL-----PQG  257 (327)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHG-----GGT
T ss_pred             ccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--HHHHHh-----hcC
Confidence                                       1122346789999999999999998 99998643221  111111     111


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                               .........+..+.+++.+||..||.+|||++++++.|+.++....
T Consensus       258 ---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  303 (327)
T 1fvr_A          258 ---------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  303 (327)
T ss_dssp             ---------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             ---------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence                     1111122334678889999999999999999999999999885543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.94  E-value=2.3e-28  Score=201.93  Aligned_cols=190  Identities=19%  Similarity=0.256  Sum_probs=131.8

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-----ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-----SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      .+.|++.+.||+|+||.+++    .+++.||||++...     .....+.+.+|+.+++.++||||+++++++.+.+.++
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            45799999999999999655    46899999999643     1224678999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCC-cCCCCccce---------------------------------------eee--------
Q 043709          106 LIYEHMPNKSLDYFLFDPAN-KGRLGWGTR---------------------------------------VRI--------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~---------------------------------------~~i--------  137 (253)
                      +|||||.+|+|.+++..... ...++....                                       +.+        
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~  182 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ  182 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence            99999999999766521100 000000000                                       000        


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++|||||||++|+|++|..||.....   .+...+    .. +...  ..
T Consensus       183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~i----~~-~~~~--~~  252 (351)
T 3c0i_A          183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGI----IK-GKYK--MN  252 (351)
T ss_dssp             CCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HHHHHH----HH-TCCC--CC
T ss_pred             ecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HHHHHH----Hc-CCCC--CC
Confidence                                 12234578899999999999999999999875321   111111    00 0000  00


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhh
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSN  238 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~  238 (253)
                      +    ......+..+.+++.+||..||++|||+.++++  .+++
T Consensus       253 ~----~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          253 P----RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             H----HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             c----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            0    000123457888999999999999999999984  4544

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.94  E-value=1.3e-27  Score=196.31  Aligned_cols=180  Identities=13%  Similarity=0.137  Sum_probs=131.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|++.+.||+|+||++++    .+++.||+|+++..   .....+.+.+|+.+++.++||||+++++++.+.+.+++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            46899999999999999654    46899999999754   345567899999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee--------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI--------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i--------------  137 (253)
                      |||+++|+|..++.....   ++.....                                    .+              
T Consensus        84 ~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           84 MEYANGGELFFHLSRERV---FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EECCTTCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence            999999999887732110   0000000                                    00              


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     .+....++.++|+|||||++|||++|..||.....  ..+...+    .. ...          .
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i----~~-~~~----------~  223 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELI----LM-EEI----------R  223 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH-CCC----------C
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHH----Hc-CCC----------C
Confidence                           22345688999999999999999999999864322  1111111    10 000          1


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      .+...+..+.+++.+||+.||.+||     ++++|++
T Consensus       224 ~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            1122345778899999999999999     8999875

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=3.9e-28  Score=201.99  Aligned_cols=190  Identities=24%  Similarity=0.327  Sum_probs=132.8

Q ss_pred             CccccCccccccccceEee----C---CCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEe-cCeeEEE
Q 043709           37 NFSMENKLGEGGFGPGKLL----N---GEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-KGVKILI  107 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~~----~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-~~~~~lv  107 (253)
                      .|.+.+.||+|+||.+++.    .   +..||+|.+... .....+.+.+|+.+++.++||||+++++++.. ++..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            4667789999999996642    2   236899999754 34556789999999999999999999999764 4678999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+.+|+|.+++......  ..+.....+                                                  
T Consensus       170 ~e~~~~g~L~~~l~~~~~~--~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             EECCTTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EECCCCCCHHHHHhhcccC--CCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            9999999999998542211  111111100                                                  


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhC-CCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSS-KKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++|||++| ..||.....  .......    . .+.  ..   
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~--~~~~~~~----~-~~~--~~---  315 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYL----L-QGR--RL---  315 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS--SCHHHHH----H-TTC--CC---
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH--HHHHHHH----H-cCC--CC---
Confidence                               11234578899999999999999995 555543222  1111111    1 110  00   


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                          ..+..++..+.+++.+||+.||++|||+.++++.|+++...+.
T Consensus       316 ----~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          316 ----LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             ----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence                1111234567889999999999999999999999999986665

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.94  E-value=7.9e-28  Score=194.23  Aligned_cols=193  Identities=21%  Similarity=0.269  Sum_probs=134.2

Q ss_pred             cCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEE-ecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCV-EKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~-~~~~~~l  106 (253)
                      ..|++.+.||+|+||.+++.       ....+|+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            46889999999999996642       1235899999754 3455678999999999999999999999975 4567899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+.+|+|.+++......  ..+.....+                                                 
T Consensus       105 v~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  182 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  182 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCC--CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred             EEeCCCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccc
Confidence            99999999999998542211  111111111                                                 


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          ......++.++||||||+++|||++|+.|+........ .....    . .+.       
T Consensus       183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~-~~~~~----~-~~~-------  249 (298)
T 3f66_A          183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYL----L-QGR-------  249 (298)
T ss_dssp             GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT-HHHHH----H-TTC-------
T ss_pred             hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH-HHHHH----h-cCC-------
Confidence                                11234567899999999999999996655443322211 11111    0 000       


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPY  245 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~  245 (253)
                        ....+...+..+.+++.+||+.||.+|||+.++++.|+++...+..
T Consensus       250 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~  295 (298)
T 3f66_A          250 --RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  295 (298)
T ss_dssp             --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred             --CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence              0011112235678889999999999999999999999999876654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.94  E-value=8.7e-28  Score=197.12  Aligned_cols=182  Identities=16%  Similarity=0.187  Sum_probs=129.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|.+.+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            6799999999999999554    57899999999753   2334567999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee---------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI---------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i---------------  137 (253)
                      ||+ +|+|.+++....   .+++....                                    .+               
T Consensus        89 E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~  164 (336)
T 3h4j_B           89 EYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFL  164 (336)
T ss_dssp             CCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTT
T ss_pred             ECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCccc
Confidence            999 678887762211   01110000                                    00               


Q ss_pred             -------------eeecCcc-ccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 -------------YALHGVF-SIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 -------------~~~~~~~-~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                   ......+ +.++|||||||++|+|++|..||........  .              ...... ....
T Consensus       165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~--------------~~i~~~-~~~~  227 (336)
T 3h4j_B          165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--F--------------KKVNSC-VYVM  227 (336)
T ss_dssp             CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--B--------------CCCCSS-CCCC
T ss_pred             ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--H--------------HHHHcC-CCCC
Confidence                         1222333 6789999999999999999999864332111  0              000000 0111


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhh
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSN  238 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~  238 (253)
                      +...+..+.+++.+||..||.+|||++++++  +++.
T Consensus       228 p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          228 PDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence            1223456788999999999999999999984  4554

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=3.7e-27  Score=188.11  Aligned_cols=183  Identities=19%  Similarity=0.185  Sum_probs=132.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.++.    .+++.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            36799999999999999655    46899999999754 33445789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|.+++.....   ++......+                                                    
T Consensus        86 ~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           86 YCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             CCTTEEGGGGSBTTTB---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             ecCCCcHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            9999999998853211   111110000                                                    


Q ss_pred             ---------------eeecCc-cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ---------------YALHGV-FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ---------------~~~~~~-~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                     ...... ++.++||||||+++|||++|..||..............     .....         .
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~~---------~  228 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-----EKKTY---------L  228 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH-----TTCTT---------S
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh-----hcccc---------c
Confidence                           011122 36789999999999999999999875544322221111     00000         0


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .........+.+++.+||..||++|||++++++
T Consensus       229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          229 NPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            111233456778999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.94  E-value=4.5e-28  Score=200.26  Aligned_cols=206  Identities=13%  Similarity=0.039  Sum_probs=143.0

Q ss_pred             hcCccccCccccccccceEee------------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcce---------
Q 043709           35 TDNFSMENKLGEGGFGPGKLL------------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR---------   93 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~------------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~---------   93 (253)
                      .++|++.+.||+|+||.+++.            .++.||+|.+...     +.+.+|+.+++.++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            367999999999999996652            3789999999753     46889999999999999998         


Q ss_pred             ------EeEEEEe-cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------
Q 043709           94 ------IIGCCVE-KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------  137 (253)
Q Consensus        94 ------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------  137 (253)
                            +++++.. .+..++||||+ +|+|.+++.... ...+++.....+                             
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~  193 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD  193 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc
Confidence                  6777776 67899999999 899999985321 011111111111                             


Q ss_pred             ---------------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCC
Q 043709          138 ---------------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNT  172 (253)
Q Consensus       138 ---------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~  172 (253)
                                                                   ......++.++|||||||++|||++|..||.....
T Consensus       194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~  273 (352)
T 2jii_A          194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP  273 (352)
T ss_dssp             TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred             CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence                                                         11223567899999999999999999999876553


Q ss_pred             CCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCC
Q 043709          173 NSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFL  252 (253)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~  252 (253)
                      ....+............   ........   ....+..+.+++.+||..||++|||+++|++.|+++..........++.
T Consensus       274 ~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~~~~~d  347 (352)
T 2jii_A          274 NTEDIMKQKQKFVDKPG---PFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVSPYDPIG  347 (352)
T ss_dssp             CHHHHHHHHHHHHHSCC---CEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCTTSCCC
T ss_pred             CHHHHHHHHHhccCChh---hhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCCcCcccc
Confidence            33222222211111111   11111100   0122356888889999999999999999999999999888887777777


Q ss_pred             C
Q 043709          253 Y  253 (253)
Q Consensus       253 ~  253 (253)
                      |
T Consensus       348 w  348 (352)
T 2jii_A          348 L  348 (352)
T ss_dssp             C
T ss_pred             C
Confidence            6

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.94  E-value=1.9e-27  Score=198.27  Aligned_cols=182  Identities=15%  Similarity=0.181  Sum_probs=131.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+.+++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            36799999999999999655    46889999999753   344567899999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+.+|+|..++.....   ++......+                                                  
T Consensus        94 ~e~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  170 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQNVH---FKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ  170 (384)
T ss_dssp             ECCCTTEEHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred             EecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence            999999999988843211   111110000                                                  


Q ss_pred             --------------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcc-hhhhhhHhhhcCCCccccccccC
Q 043709          138 --------------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLT-LLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 --------------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                    .+   ....|+.++|||||||++|||++|..||......... +.... ..  ..           
T Consensus       171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~-~~--~~-----------  236 (384)
T 4fr4_A          171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF-ET--TV-----------  236 (384)
T ss_dssp             BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH-HH--CC-----------
T ss_pred             eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHH-hh--cc-----------
Confidence                          11   1234788999999999999999999998754433211 11111 00  00           


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCC-HHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPT-MLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs-~~~il~  234 (253)
                       ...+...+..+.+++.+||+.||.+||+ +++|++
T Consensus       237 -~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 -VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             -CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             -cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence             0111223457888999999999999998 777664

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.94  E-value=6.6e-28  Score=197.30  Aligned_cols=182  Identities=19%  Similarity=0.209  Sum_probs=127.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC-------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG-------  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~-------  102 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+       
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            35799999999999999664    47899999999754 3445678999999999999999999999986543       


Q ss_pred             --------------------------------------------------eeEEEEeeCCCCChhhhccCCCCcCCCCcc
Q 043709          103 --------------------------------------------------VKILIYEHMPNKSLDYFLFDPANKGRLGWG  132 (253)
Q Consensus       103 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~  132 (253)
                                                                        ..+++||||.+|+|.+++..........+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~  164 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG  164 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence                                                              389999999999999988553322222111


Q ss_pred             ceeee---------------------------------------------------------------------------
Q 043709          133 TRVRI---------------------------------------------------------------------------  137 (253)
Q Consensus       133 ~~~~i---------------------------------------------------------------------------  137 (253)
                      ....+                                                                           
T Consensus       165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            00000                                                                           


Q ss_pred             --eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHh
Q 043709          138 --YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVD  215 (253)
Q Consensus       138 --~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  215 (253)
                        ......++.++|||||||++|||++|..|+...       .... ... ....         ...........+.+++
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~-~~~-~~~~---------~~~~~~~~~~~~~~li  306 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRII-TDV-RNLK---------FPLLFTQKYPQEHMMV  306 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHH-HHH-HTTC---------CCHHHHHHCHHHHHHH
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHH-HHh-hccC---------CCcccccCChhHHHHH
Confidence              011235788999999999999999987664211       0000 000 0110         0111123345678899


Q ss_pred             ccccCCCCCCCCCHHHHHH
Q 043709          216 LFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       216 ~~cl~~~p~~RPs~~~il~  234 (253)
                      .+||+.||++|||+.++++
T Consensus       307 ~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          307 QDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHCSSGGGSCCHHHHHH
T ss_pred             HHHccCCCCcCCCHHHHhh
Confidence            9999999999999999986

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=2.7e-27  Score=190.67  Aligned_cols=184  Identities=17%  Similarity=0.223  Sum_probs=127.8

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      +|.....||+|+||.+++    .++..||||.+........+.+.+|+.+++.++||||+++++++...+..+++|||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            344455899999999654    4688999999987666667889999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|.+++..........+.....+                                                       
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~  182 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET  182 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred             CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence            9999998854321111111111000                                                       


Q ss_pred             -----------eeec--CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -----------YALH--GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -----------~~~~--~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                 ....  ..++.++||||||+++|+|++|..||.............   ...           ......+
T Consensus       183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~-----------~~~~~~~  248 (295)
T 2clq_A          183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMF-----------KVHPEIP  248 (295)
T ss_dssp             CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH---HHH-----------CCCCCCC
T ss_pred             cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh---ccc-----------ccccccc
Confidence                       0001  126788999999999999999999986433221111100   000           0011112


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+..+.+++.+||..||++||++.++++
T Consensus       249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          249 ESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            233457788999999999999999999985

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.94  E-value=1.3e-27  Score=194.14  Aligned_cols=194  Identities=18%  Similarity=0.129  Sum_probs=131.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++....  ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            5799999999999999654    458899999996542  3335678899999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+.+++|..++.....   +++.....+                                                    
T Consensus        83 ~~~~~~l~~~~~~~~~---~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  159 (311)
T 4agu_A           83 YCDHTVLHELDRYQRG---VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY  159 (311)
T ss_dssp             CCSEEHHHHHHHTSSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             eCCCchHHHHHhhhcC---CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence            9999999887643211   111100000                                                    


Q ss_pred             -------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh----------hcCCCc--
Q 043709          138 -------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL----------WNDGSL--  191 (253)
Q Consensus       138 -------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~--  191 (253)
                                   .. ....++.++||||||+++|+|++|..||........  ........          ......  
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (311)
T 4agu_A          160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ--LYLIRKTLGDLIPRHQQVFSTNQYFS  237 (311)
T ss_dssp             ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred             CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhcccccccccccccccccc
Confidence                         01 124578899999999999999999999865433211  11110000          000000  


Q ss_pred             -cccccccCCC---CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          192 -WDLMDPMLQT---EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       192 -~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       ....++....   ......+..+.+++.+||+.||++|||++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence             0000000000   000123456888999999999999999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=2.9e-27  Score=194.75  Aligned_cols=90  Identities=19%  Similarity=0.289  Sum_probs=77.0

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEeccc-----ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-----SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG  102 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~  102 (253)
                      ....++|++.+.||+|+||.+++    .+++.||+|++...     .....+.+.+|+.+++.++||||+++++++.+.+
T Consensus        22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence            34455899999999999999654    56889999999643     3455678999999999999999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhcc
Q 043709          103 VKILIYEHMPNKSLDYFLF  121 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~  121 (253)
                      ..++|||||++|+|.+++.
T Consensus       102 ~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEE
T ss_pred             eEEEEEeCCCCCcHHHHHH
Confidence            9999999999999988773

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.94  E-value=2.8e-27  Score=190.53  Aligned_cols=195  Identities=16%  Similarity=0.141  Sum_probs=128.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            5799999999999999655    46889999999754  23345778999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+.+ ++.+++....  ..++......+                                                    
T Consensus        82 ~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  158 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred             cCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence            9986 4444331100  00111100000                                                    


Q ss_pred             -------------eeec-CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc--CCCcccc-------
Q 043709          138 -------------YALH-GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN--DGSLWDL-------  194 (253)
Q Consensus       138 -------------~~~~-~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------  194 (253)
                                   .... ..++.++|||||||++|||++|+.|+......... ...+......  .......       
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH-HHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHHhCCCChhhhhhhccccccc
Confidence                         1112 23788999999999999999999887544332221 1111111110  0000000       


Q ss_pred             -----ccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          195 -----MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       195 -----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                           ................+.+++.+||+.||++|||++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                 0000011112234567788999999999999999999986

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.94  E-value=2.2e-27  Score=189.76  Aligned_cols=189  Identities=26%  Similarity=0.373  Sum_probs=134.1

Q ss_pred             HhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec-CeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-GVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-~~~~lv~e~  110 (253)
                      ..++|++.+.||+|+||.+++  ..++.||||++...  ...+.+.+|+.+++.++||||+++++++... +..+++|||
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   96 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   96 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence            457899999999999999655  56889999999753  3557899999999999999999999997654 578999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceee------------------------------------e-----------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I-----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i-----------------  137 (253)
                      +++|+|.+++...... .+++.....                                    +                 
T Consensus        97 ~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  175 (278)
T 1byg_A           97 MAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  175 (278)
T ss_dssp             CTTEEHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             CCCCCHHHHHHhcccc-cCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence            9999999887321100 001100000                                    0                 


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                               ......++.++||||||+++|||++ |..||......  .....+     ..+         .........
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~-----~~~---------~~~~~~~~~  239 (278)
T 1byg_A          176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRV-----EKG---------YKMDAPDGC  239 (278)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHH-----TTT---------CCCCCCTTC
T ss_pred             ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-----hcC---------CCCCCcccC
Confidence                     1123457889999999999999998 88887643321  111111     111         111112233


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      +..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       240 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~  273 (278)
T 1byg_A          240 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  273 (278)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence            4678889999999999999999999999998763

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.94  E-value=1e-27  Score=192.09  Aligned_cols=189  Identities=25%  Similarity=0.292  Sum_probs=133.7

Q ss_pred             HhcCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..++|++.+.||+|+||.+++.       ++..||+|.+... .....+.+.+|+.+++.++||||+++++++.+ +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            4568999999999999996652       2235999999865 34456789999999999999999999999765 4579


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++|||+++|+|.+++.....  .+++.....+                                                
T Consensus        89 ~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  166 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERNKN--SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE  166 (281)
T ss_dssp             EEEECCTTCBHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred             EEEecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence            99999999999998843211  0111111100                                                


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        ......++.++||||||+++|||++ |..||.......  .....    .... .       
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~----~~~~-~-------  232 (281)
T 3cc6_A          167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVL----EKGD-R-------  232 (281)
T ss_dssp             ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHH----HHTC-C-------
T ss_pred             cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHH----hcCC-C-------
Confidence                              1123457788999999999999998 999986433221  11111    0000 0       


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                        ...+...+..+.+++.+||..||++|||+.++++.|+++..
T Consensus       233 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          233 --LPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence              01111233567888999999999999999999999998763

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.94  E-value=3.9e-27  Score=202.64  Aligned_cols=193  Identities=18%  Similarity=0.192  Sum_probs=135.5

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            45799999999999999665    46899999999643  3445678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCC-------------------------------cCCCCc-----cceeee---------------
Q 043709          109 EHMPNKSLDYFLFDPAN-------------------------------KGRLGW-----GTRVRI---------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~-------------------------------~~~~~~-----~~~~~i---------------  137 (253)
                      |||.+|+|.+.+.....                               ...+-.     ...+.+               
T Consensus       101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~  180 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM  180 (486)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCcc
Confidence            99999999776621100                               000000     000000               


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ....+.|+.++||||+||++|+|++|..||.....  ..+...+    . .+..      ........
T Consensus       181 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i----~-~~~~------~~~~~~~~  247 (486)
T 3mwu_A          181 KDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRV----E-TGKY------AFDLPQWR  247 (486)
T ss_dssp             -CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-HTCC------CSCSGGGG
T ss_pred             CCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-hCCC------CCCCcccC
Confidence                        12234578899999999999999999999864332  1122111    0 0100      00011112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ..+..+.+++.+||..||.+|||+.++++  +++...
T Consensus       248 ~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          248 TISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (486)
T ss_dssp             GSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence            34467888999999999999999999995  465544

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=4e-27  Score=191.61  Aligned_cols=193  Identities=16%  Similarity=0.185  Sum_probs=131.3

Q ss_pred             hcCcccc-CccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSME-NKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~-~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .+.|.+. +.||+|+||.+++    .+++.||||++........+.+.+|+.+++++ +||||+++++++.+.+..++||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            3568875 7899999999665    46889999999876666678899999999995 7999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCc---------------------------------------------CCCCccceeee------
Q 043709          109 EHMPNKSLDYFLFDPANK---------------------------------------------GRLGWGTRVRI------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~---------------------------------------------~~~~~~~~~~i------  137 (253)
                      ||+++|+|.+++......                                             ...++.....+      
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~  170 (316)
T 2ac3_A           91 EKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC  170 (316)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred             EcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence            999999998887321100                                             00000000000      


Q ss_pred             ---------------------eee-----cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchh---------hhhh
Q 043709          138 ---------------------YAL-----HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL---------GYVI  182 (253)
Q Consensus       138 ---------------------~~~-----~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~---------~~~~  182 (253)
                                           ...     ...++.++|||||||++|||++|..||.........+.         ... 
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-  249 (316)
T 2ac3_A          171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML-  249 (316)
T ss_dssp             -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH-
T ss_pred             ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH-
Confidence                                 000     13467889999999999999999999976543321100         000 


Q ss_pred             HhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          183 WNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......+.. ...     .......+..+.+++.+||..||++|||++++++
T Consensus       250 ~~~i~~~~~-~~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          250 FESIQEGKY-EFP-----DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHHHCCC-CCC-----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHhccCc-ccC-----chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            000000000 000     0000123456888999999999999999999986

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.94  E-value=1.9e-27  Score=198.91  Aligned_cols=187  Identities=11%  Similarity=0.192  Sum_probs=128.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..++|++.+.||+|+||++++    .+++.||+|+++..   .....+.+..|..++..+ +||||+++++++.+.+.++
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            346899999999999999664    46889999999754   233445688999999987 8999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i------------  137 (253)
                      +||||+.+|+|..++.....   +++.....                                    +            
T Consensus       130 lV~E~~~gg~L~~~l~~~~~---l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  206 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP  206 (396)
T ss_dssp             EEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEEcCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence            99999999999887732110   01000000                                    0            


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc---chhhhhhHhhhcCCCccccccc
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL---TLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                       .+....|+.++|+|||||++|||++|..||........   ...... ........       
T Consensus       207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~-~~~i~~~~-------  278 (396)
T 4dc2_A          207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQ-------  278 (396)
T ss_dssp             TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH-HHHHHHCC-------
T ss_pred             CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH-HHHHhccc-------
Confidence                             22345688899999999999999999999964432211   011111 11110010       


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCH------HHHHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTM------LEIVS  234 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~------~~il~  234 (253)
                         ...+......+.+++.+||+.||.+||++      ++|++
T Consensus       279 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~  318 (396)
T 4dc2_A          279 ---IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  318 (396)
T ss_dssp             ---CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred             ---cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence               01112234567889999999999999985      56653

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.94  E-value=7e-28  Score=197.03  Aligned_cols=189  Identities=22%  Similarity=0.319  Sum_probs=131.5

Q ss_pred             hcCccccCccccccccceEe----eCCCE----EEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQ----VAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      .++|++.+.||+|+||.+++    .+++.    ||+|.+... .....+.+.+|+.+++.++||||+++++++. ++..+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~   90 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ   90 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence            35799999999999999665    34444    788887543 3344467889999999999999999999886 46689


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +||||+.+|+|.+++....  ..+++.....+                                                
T Consensus        91 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  168 (325)
T 3kex_A           91 LVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD  168 (325)
T ss_dssp             EEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred             EEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence            9999999999999885421  11222211111                                                


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++|||++ |..||......  .....+     ....  ....+
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~-----~~~~--~~~~~  239 (325)
T 3kex_A          169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLL-----EKGE--RLAQP  239 (325)
T ss_dssp             TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHH-----HTTC--BCCCC
T ss_pred             cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHH-----HcCC--CCCCC
Confidence                               1122457889999999999999999 99998654322  111111     1111  01111


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      .       ..+..+.+++.+||..||.+|||+.++++.|+.+...
T Consensus       240 ~-------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          240 Q-------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             T-------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             C-------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            1       1223456677779999999999999999999988643

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.94  E-value=4.1e-27  Score=190.63  Aligned_cols=191  Identities=16%  Similarity=0.192  Sum_probs=131.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|.+.+.||+|+||.+++    .+++.||+|++........+.+.+|+.+++.++||||+++++++.+.+..+++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL   87 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence            46799999999999999654    46899999999865544556789999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCC-------------------------------cCCCCc-----cceeee-----------------
Q 043709          111 MPNKSLDYFLFDPAN-------------------------------KGRLGW-----GTRVRI-----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~-------------------------------~~~~~~-----~~~~~i-----------------  137 (253)
                      +++|+|.+++.....                               ...+-.     .....+                 
T Consensus        88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~  167 (304)
T 2jam_A           88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA  167 (304)
T ss_dssp             CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHH
T ss_pred             CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccc
Confidence            999999887622110                               000000     000000                 


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                                ......++.++|||||||++|||++|..||.....  ..+...+    . .+.. .     .........
T Consensus       168 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i----~-~~~~-~-----~~~~~~~~~  234 (304)
T 2jam_A          168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKI----K-EGYY-E-----FESPFWDDI  234 (304)
T ss_dssp             HSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHH----H-HCCC-C-----CCTTTTTTS
T ss_pred             cCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----H-cCCC-C-----CCccccccC
Confidence                      12334578899999999999999999999864322  1111111    0 0100 0     011111233


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHHH--HHhh
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIVS--MLSN  238 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~  238 (253)
                      +..+.+++.+||..||++|||++++++  .+++
T Consensus       235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  267 (304)
T 2jam_A          235 SESAKDFICHLLEKDPNERYTCEKALSHPWIDG  267 (304)
T ss_dssp             CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHS
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCccccC
Confidence            467888999999999999999999985  4543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.94  E-value=9.2e-28  Score=212.14  Aligned_cols=180  Identities=24%  Similarity=0.307  Sum_probs=130.2

Q ss_pred             CccccccccceEee------CCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKLL------NGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~~------~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||.+++.      .++.||||+++..  .....+.+.+|+.+|+.++||||+++++++.. +..++||||+.+
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            36999999996652      4578999999764  33446789999999999999999999999864 568999999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|.+++....   .+.+.....+                                                        
T Consensus       454 g~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~  530 (635)
T 4fl3_A          454 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT  530 (635)
T ss_dssp             EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred             CCHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence            99999884321   1111111111                                                        


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                  .+....++.++|||||||++|||++ |..||......  .+...+     ..+         .....+
T Consensus       531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i-----~~~---------~~~~~p  594 (635)
T 4fl3_A          531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAML-----EKG---------ERMGCP  594 (635)
T ss_dssp             ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHH-----HTT---------CCCCCC
T ss_pred             CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH-----HcC---------CCCCCC
Confidence                        1223457889999999999999998 99998644321  111111     111         111122


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ..++..+.+++.+||+.||++||++++|++.|+++..
T Consensus       595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~  631 (635)
T 4fl3_A          595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  631 (635)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            2344678889999999999999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.94  E-value=3.4e-27  Score=191.79  Aligned_cols=196  Identities=16%  Similarity=0.138  Sum_probs=129.8

Q ss_pred             HhcCccccCccccccccceEe---eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..++|++.+.||+|+||.+++   .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   98 (311)
T 3niz_A           19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF   98 (311)
T ss_dssp             SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred             hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence            346899999999999999655   46889999999754  2333567899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+.+ +|.+++......  ++......+                                                   
T Consensus        99 e~~~~-~l~~~~~~~~~~--~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~  175 (311)
T 3niz_A           99 EFMEK-DLKKVLDENKTG--LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS  175 (311)
T ss_dssp             ECCSE-EHHHHHHTCTTC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred             cCCCC-CHHHHHHhccCC--CCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence            99985 777766332110  111110000                                                   


Q ss_pred             --------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCcccc------
Q 043709          138 --------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLWDL------  194 (253)
Q Consensus       138 --------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------  194 (253)
                                    .. ....++.++||||+||++|||++|..||.......  ..........  ........      
T Consensus       176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~  253 (311)
T 3niz_A          176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD--QLPKIFSILGTPNPREWPQVQELPLW  253 (311)
T ss_dssp             --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT--HHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred             ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHHCCCChHHhhhhhccchh
Confidence                          11 12457889999999999999999999987544332  1111111110  00000000      


Q ss_pred             -------ccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          195 -------MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       195 -------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                             ................+.+++.+||+.||++|||++++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                   0000000011123356788999999999999999999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.94  E-value=2.7e-27  Score=197.03  Aligned_cols=183  Identities=21%  Similarity=0.201  Sum_probs=125.3

Q ss_pred             cCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           41 ENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        41 ~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      .+.||+|+||.+++    .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||+++|+|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            56799999999665    46889999999876556677899999999999999999999999999999999999999999


Q ss_pred             hhhccCCCCcCCCCccc--------------------------------------eeee---------------------
Q 043709          117 DYFLFDPANKGRLGWGT--------------------------------------RVRI---------------------  137 (253)
Q Consensus       117 ~~~l~~~~~~~~~~~~~--------------------------------------~~~i---------------------  137 (253)
                      .+++.....  .+.+..                                      .+.+                     
T Consensus       174 ~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt  251 (373)
T 2x4f_A          174 FDRIIDESY--NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGT  251 (373)
T ss_dssp             HHHHHHTGG--GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSS
T ss_pred             HHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCC
Confidence            887632110  011100                                      0011                     


Q ss_pred             -------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHH
Q 043709          138 -------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKR  210 (253)
Q Consensus       138 -------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (253)
                             ......++.++|||||||++|||++|..||.....  ......+....   ..        ............
T Consensus       252 ~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~~~~---~~--------~~~~~~~~~~~~  318 (373)
T 2x4f_A          252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--AETLNNILACR---WD--------LEDEEFQDISEE  318 (373)
T ss_dssp             CTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHHHHTC---CC--------SCSGGGTTSCHH
T ss_pred             CcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcc---CC--------CChhhhccCCHH
Confidence                   11234567899999999999999999999864432  11111110100   00        001111223467


Q ss_pred             HHHHhccccCCCCCCCCCHHHHHH--HHhh
Q 043709          211 YSNVDLFCFRENATDRPTMLEIVS--MLSN  238 (253)
Q Consensus       211 ~~~l~~~cl~~~p~~RPs~~~il~--~L~~  238 (253)
                      +.+++.+||+.||.+|||+.++++  .+.+
T Consensus       319 ~~~li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          319 AKEFISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            888999999999999999999986  4443

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.94  E-value=4.3e-28  Score=200.03  Aligned_cols=183  Identities=23%  Similarity=0.255  Sum_probs=128.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..+.|+..+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  131 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL  131 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence            345699999999999999654    56889999999754   23345678999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+. |+|.+++.....  .+++.....+                                                 
T Consensus       132 v~e~~~-g~l~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~  208 (348)
T 1u5q_A          132 VMEYCL-GSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN  208 (348)
T ss_dssp             EEECCS-EEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC
T ss_pred             EEecCC-CCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC
Confidence            999998 577776632110  1111111100                                                 


Q ss_pred             ------------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ------------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ------------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                  ..   ..+.++.++|||||||++|||++|..||......  ......    .... ...     .   
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~--~~~~~~----~~~~-~~~-----~---  273 (348)
T 1u5q_A          209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHI----AQNE-SPA-----L---  273 (348)
T ss_dssp             CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH----HHSC-CCC-----C---
T ss_pred             cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHH----HhcC-CCC-----C---
Confidence                        01   2456888999999999999999999998643221  111111    1111 000     1   


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+..+.+++.+||+.||++|||++++++
T Consensus       274 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          274 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            01122356778888999999999999999885

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.94  E-value=6e-27  Score=187.21  Aligned_cols=182  Identities=16%  Similarity=0.252  Sum_probs=127.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            346799999999999999554    47889999999753   23345789999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +|||+++++|.+++.....  .+++.....+                                                 
T Consensus        89 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNRVK--PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EEECCTTEEHHHHHHTCSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EEecCCCCcHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence            9999999999998854211  1111111111                                                 


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ......++.++||||||+++|||++|..||........  ..             .......  
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~-------------~~~~~~~--  229 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--LN-------------KVVLADY--  229 (278)
T ss_dssp             -------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSCC--
T ss_pred             CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--HH-------------HHhhccc--
Confidence                            12233467899999999999999999999864432211  00             0000000  


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+...+..+.+++.+||+.||++|||++++++
T Consensus       230 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          230 EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            111223456788999999999999999999986

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.94  E-value=3.4e-27  Score=189.18  Aligned_cols=192  Identities=18%  Similarity=0.244  Sum_probs=133.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++...+..+++|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            46899999999999999665    46889999999754  3344577899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCC-------------------------------cC--------------CCCccceeee------
Q 043709          109 EHMPNKSLDYFLFDPAN-------------------------------KG--------------RLGWGTRVRI------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~-------------------------------~~--------------~~~~~~~~~i------  137 (253)
                      ||+.+|+|.+++.....                               ..              ..++......      
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW  164 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccc
Confidence            99999999776521110                               00              0000000000      


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++||||||+++|+|++|..||......  ......    . .+.. ...     ....
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~----~-~~~~-~~~-----~~~~  231 (284)
T 3kk8_A          165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQI----K-AGAY-DYP-----SPEW  231 (284)
T ss_dssp             CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH----H-HTCC-CCC-----TTTT
T ss_pred             cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHH----H-hccc-cCC-----chhh
Confidence                         122345788999999999999999999998643321  111111    0 0000 000     1111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                      ...+..+.+++.+||+.||++|||++++++  .+++.
T Consensus       232 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          232 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             cccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence            123456788999999999999999999995  45443

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.94  E-value=2.2e-27  Score=189.61  Aligned_cols=193  Identities=15%  Similarity=0.237  Sum_probs=135.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.+++    .++..+|+|++........+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL   87 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence            45799999999999999654    45779999999876666778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCC-------------------------------cCCC-----Cccceeee-----------------
Q 043709          111 MPNKSLDYFLFDPAN-------------------------------KGRL-----GWGTRVRI-----------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~-------------------------------~~~~-----~~~~~~~i-----------------  137 (253)
                      +.+++|.+++.....                               ...+     .-.....+                 
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~  167 (277)
T 3f3z_A           88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT  167 (277)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCC
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhc
Confidence            999999887622110                               0000     00000000                 


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                                ....+.++.++||||||+++|||++|..||......  .....+    . .+.. .....     .....
T Consensus       168 ~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~----~-~~~~-~~~~~-----~~~~~  234 (277)
T 3f3z_A          168 KVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLKI----R-EGTF-TFPEK-----DWLNV  234 (277)
T ss_dssp             CCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH----H-HCCC-CCCHH-----HHTTS
T ss_pred             cCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHHH----H-hCCC-CCCch-----hhhcC
Confidence                      111234688999999999999999999998643321  111111    0 0000 00000     00123


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                      +..+.+++.+||+.||++|||+.+++  ..+++..
T Consensus       235 ~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          235 SPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence            45778899999999999999999998  4566555

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.94  E-value=6.1e-27  Score=201.30  Aligned_cols=191  Identities=21%  Similarity=0.251  Sum_probs=137.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            345799999999999999664    47899999999654   24556789999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccc---------------------------------------eeee----------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGT---------------------------------------RVRI----------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~---------------------------------------~~~i----------  137 (253)
                      |||||.+|+|.+++.....   +++..                                       .+.+          
T Consensus       104 v~e~~~~~~L~~~~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISRKR---FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             EECCCCSCBHHHHHHTCSC---CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EEecCCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            9999999999887733211   11000                                       0011          


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       ....+.|+.++||||+||++|+|++|..||.....  ..+...+    . .+..      ...
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i----~-~~~~------~~~  247 (484)
T 3nyv_A          181 ASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKV----E-KGKY------TFE  247 (484)
T ss_dssp             CCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-HCCC------CCC
T ss_pred             cccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----H-cCCC------CCC
Confidence                             11234578899999999999999999999864432  1122211    0 0100      000


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                      .......+..+.+++.+||..||.+|||+.+++  .+++...
T Consensus       248 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          248 LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            111123446788899999999999999999999  4566554

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.94  E-value=8.3e-28  Score=194.35  Aligned_cols=197  Identities=20%  Similarity=0.278  Sum_probs=118.2

Q ss_pred             HHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      +....++|++.+.||+|+||.++.    .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+..+
T Consensus        10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   89 (303)
T 2vwi_A           10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW   89 (303)
T ss_dssp             ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred             cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence            445567899999999999999655    36889999999754 2344567899999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCC-----CCcCCCCccceeee-------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDP-----ANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      +||||+++|+|.+++...     .....+++.....+                                           
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchh
Confidence            999999999999987420     00111111111111                                           


Q ss_pred             ---------------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC
Q 043709          138 ---------------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ---------------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~  189 (253)
                                                 .. ....++.++|||||||++|||++|..||........  ...   ..  ..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~---~~--~~  242 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV--LML---TL--QN  242 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--HHH---HH--TS
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH--HHH---Hh--cc
Confidence                                       00 012467899999999999999999999875433211  100   00  01


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..................+..+.+++.+||+.||.+|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            111111111111111223456788999999999999999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.94  E-value=4.4e-27  Score=190.14  Aligned_cols=185  Identities=18%  Similarity=0.295  Sum_probs=130.2

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ..+.|++.+.||+|+||.++.    .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            457899999999999999554    4588999999987766778899999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+++|+|.+++.....  .+++.....+                                                    
T Consensus        97 ~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  174 (302)
T 2j7t_A           97 FCPGGAVDAIMLELDR--GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR  174 (302)
T ss_dssp             CCTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred             eCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence            9999999988732111  0111110000                                                    


Q ss_pred             -------------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 -------------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 -------------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                   ..     ....++.++||||||+++|+|++|..||......  ....    ...... ....     
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~----~~~~~~-~~~~-----  242 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLL----KIAKSD-PPTL-----  242 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHH----HHHHSC-CCCC-----
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHH----HHhccC-Cccc-----
Confidence                         00     2345678999999999999999999998643321  1111    111010 0000     


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        ......+..+.+++.+||+.||.+|||+.++++
T Consensus       243 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          243 --LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             --SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             --CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence              111223456788999999999999999999885

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.93  E-value=4.2e-27  Score=192.05  Aligned_cols=187  Identities=17%  Similarity=0.159  Sum_probs=131.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccccc------ccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG------QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++.....      ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   90 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV   90 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            35799999999999999655    4688999999975421      2367899999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCc-------------------------------CC--CCccc----eeee----------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK-------------------------------GR--LGWGT----RVRI----------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~-------------------------------~~--~~~~~----~~~i----------  137 (253)
                      ++||||+++|+|.+++......                               ..  +.-..    ...+          
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~  170 (321)
T 2a2a_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE  170 (321)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence            9999999999999987432100                               00  00000    0111          


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML  199 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (253)
                                        ......++.++|||||||++|+|++|..||.....  ......+    . ....      ..
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i----~-~~~~------~~  237 (321)
T 2a2a_A          171 DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANI----T-SVSY------DF  237 (321)
T ss_dssp             TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH----H-TTCC------CC
T ss_pred             ccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH----H-hccc------cc
Confidence                              11234577899999999999999999999864322  1111111    0 0000      00


Q ss_pred             CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       200 ~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ........+..+.+++.+||..||++|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          238 DEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             CHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             ChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            00001123356788999999999999999999986

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.93  E-value=2.1e-27  Score=191.80  Aligned_cols=181  Identities=16%  Similarity=0.159  Sum_probs=122.5

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccccc--------------------------ccHHHHHHHHHHHH
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG--------------------------QGLEEFKNEMMLIA   84 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~   84 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46899999999999999665    4688999999965321                          12356899999999


Q ss_pred             hccCCCcceEeEEEEe--cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------
Q 043709           85 KLQDINLVRIIGCCVE--KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------  137 (253)
Q Consensus        85 ~l~H~nIv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------  137 (253)
                      .++||||+++++++.+  .+..++||||+++|+|.+++....    +++.....+                         
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  167 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP----LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN  167 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCC----CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            9999999999999986  568999999999999988753211    111110000                         


Q ss_pred             ----------------------------------------eeecCc---cccccceeehhHHHHHHHhCCCCcCcCCCCC
Q 043709          138 ----------------------------------------YALHGV---FSIKSDVFSFGVLLLETLSSKKNAHFYNTNS  174 (253)
Q Consensus       138 ----------------------------------------~~~~~~---~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~  174 (253)
                                                              ......   ++.++|||||||++|||++|..||.....  
T Consensus       168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--  245 (298)
T 2zv2_A          168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI--  245 (298)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH--
T ss_pred             EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH--
Confidence                                                    011111   36778999999999999999999864321  


Q ss_pred             cchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          175 LTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+...+    . ....        ........+..+.+++.+||+.||++|||+.++++
T Consensus       246 ~~~~~~~----~-~~~~--------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          246 MCLHSKI----K-SQAL--------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHH----H-HCCC--------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHH----h-cccC--------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            1111111    0 0000        00111123456888999999999999999999874

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.93  E-value=3.1e-27  Score=203.59  Aligned_cols=193  Identities=16%  Similarity=0.186  Sum_probs=130.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ..+.|++++.||+|+||.+++    .++..||+|++...  .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            345799999999999999664    46889999999754  244467899999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCC-------------------------------cC--------------CCCccceeee-----
Q 043709          108 YEHMPNKSLDYFLFDPAN-------------------------------KG--------------RLGWGTRVRI-----  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~-------------------------------~~--------------~~~~~~~~~i-----  137 (253)
                      ||||.+|+|.+++.....                               ..              ..++.....+     
T Consensus       115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence            999999999776621100                               00              0000000000     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ....+.|+.++||||+||++|+|++|..||.....  ..+...+..     +.. ....+     ..
T Consensus       195 ~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~-----~~~-~~~~~-----~~  261 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRKVEK-----GKY-TFDSP-----EW  261 (494)
T ss_dssp             BCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH-----TCC-CCCSG-----GG
T ss_pred             ccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHh-----CCC-CCCch-----hc
Confidence                         11234578899999999999999999999864432  122221101     000 00011     11


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                      ...+..+.+++.+||+.||.+|||+.++++  ++++.
T Consensus       262 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          262 KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             ccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            123456788999999999999999999983  45543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.93  E-value=4.7e-27  Score=191.45  Aligned_cols=203  Identities=18%  Similarity=0.207  Sum_probs=120.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++... .....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46799999999999999665    46889999999754 33445788999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCC---cCCCCccceeee-------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPAN---KGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~---~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |+. |+|.+++.....   ...+.+.....+                                                 
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  162 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV  162 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence            998 588887632110   000111110000                                                 


Q ss_pred             ----------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc-CCCcccc-----
Q 043709          138 ----------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN-DGSLWDL-----  194 (253)
Q Consensus       138 ----------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----  194 (253)
                                      .. ....++.++|||||||++|||++|..||......  .....+...... .......     
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~  240 (317)
T 2pmi_A          163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE--EQLKLIFDIMGTPNESLWPSVTKLP  240 (317)
T ss_dssp             CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred             ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCChhHhhhhhhhh
Confidence                            01 1235788999999999999999999998754321  111111111000 0000000     


Q ss_pred             -ccccC------------CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          195 -MDPML------------QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       195 -~~~~~------------~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                       ..+..            ...........+.+++.+||+.||++|||++++++  .+.+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             TCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             hcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence             00000            00011123457889999999999999999999985  455544

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.93  E-value=1.9e-27  Score=197.07  Aligned_cols=197  Identities=17%  Similarity=0.200  Sum_probs=132.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .++..||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            35799999999999999665    46889999999765 34456789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccce-------------------------------------eee---------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTR-------------------------------------VRI---------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~-------------------------------------~~i---------------  137 (253)
                      |+++|+|.+++.....   +++...                                     ..+               
T Consensus       112 ~~~~~~L~~~l~~~~~---~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  188 (360)
T 3eqc_A          112 HMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN  188 (360)
T ss_dssp             CCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--
T ss_pred             CCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccccc
Confidence            9999999988743110   010000                                     000               


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh---------------------
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN---------------------  184 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~---------------------  184 (253)
                                  ......++.++|||||||++|||++|..||.................                     
T Consensus       189 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (360)
T 3eqc_A          189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFG  268 (360)
T ss_dssp             --CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------------
T ss_pred             CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccc
Confidence                        12234578899999999999999999999875432211100000000                     


Q ss_pred             --hhcCCCccccc----cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          185 --LWNDGSLWDLM----DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       185 --~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        ...........    ............+..+.+++.+||+.||++|||++++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          269 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             -----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence              00000000000    000000111123456888999999999999999999984

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.93  E-value=6e-27  Score=188.27  Aligned_cols=194  Identities=17%  Similarity=0.161  Sum_probs=130.3

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|+||.+++   .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            5799999999999999655   45889999999754  233457889999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +.+ +|.+++.....  .+.......+                                                     
T Consensus        82 ~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (288)
T 1ob3_A           82 LDQ-DLKKLLDVCEG--GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (288)
T ss_dssp             CSE-EHHHHHHTSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             cCC-CHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence            985 88877743211  1111110000                                                     


Q ss_pred             ------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCcccc-----ccc
Q 043709          138 ------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLWDL-----MDP  197 (253)
Q Consensus       138 ------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~  197 (253)
                                  .. ....++.++|||||||++|||++|..||......  ...........  ........     .++
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--DQLMRIFRILGTPNSKNWPNVTELPKYDP  236 (288)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHHCCCChhhchhhhccccccc
Confidence                        01 1234788999999999999999999998654321  11111101100  00000000     000


Q ss_pred             cC-------CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          198 ML-------QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       198 ~~-------~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..       ...........+.+++.+||+.||++|||++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            00       01111234567788999999999999999999985

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.93  E-value=3.2e-27  Score=193.10  Aligned_cols=181  Identities=16%  Similarity=0.163  Sum_probs=122.8

Q ss_pred             cCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEeeCCCCC
Q 043709           41 ENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEHMPNKS  115 (253)
Q Consensus        41 ~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~~~~g~  115 (253)
                      .+.||+|+||.+++    .+++.||||++..   .....+.+|+.+++.+. ||||+++++++.+.+..++||||+.+|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            37899999999655    5689999999974   34467889999999997 9999999999999999999999999999


Q ss_pred             hhhhccCCCCcCCCCccc---------------------------------------eeee-------------------
Q 043709          116 LDYFLFDPANKGRLGWGT---------------------------------------RVRI-------------------  137 (253)
Q Consensus       116 L~~~l~~~~~~~~~~~~~---------------------------------------~~~i-------------------  137 (253)
                      |.+++.....   +++..                                       ...+                   
T Consensus        93 L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  169 (325)
T 3kn6_A           93 LFERIKKKKH---FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTP  169 (325)
T ss_dssp             HHHHHHHCSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred             HHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccccc
Confidence            9988743210   11000                                       0001                   


Q ss_pred             ----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-chhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 ----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-TLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 ----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                ......++.++|||||||++|||++|..||........ ...... ......+..      .........
T Consensus       170 ~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~-~~~i~~~~~------~~~~~~~~~  242 (325)
T 3kn6_A          170 CFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI-MKKIKKGDF------SFEGEAWKN  242 (325)
T ss_dssp             --------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH-HHHHTTTCC------CCCSHHHHT
T ss_pred             CCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH-HHHHHcCCC------CCCcccccC
Confidence                      22344578899999999999999999999875443211 000111 111111111      011111122


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+..+.+++.+||..||.+|||++++++
T Consensus       243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          243 VSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            4567888999999999999999999883

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.93  E-value=5.1e-27  Score=194.80  Aligned_cols=211  Identities=14%  Similarity=0.120  Sum_probs=141.2

Q ss_pred             HhcCccccCccccccccceEee---------CCCEEEEEEeccccccc-----------HHHHHHHHHHHHhccCCCcce
Q 043709           34 ATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQG-----------LEEFKNEMMLIAKLQDINLVR   93 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~nIv~   93 (253)
                      ..++|++.+.||+|+||.+++.         .++.||||++.......           ...+..|+..++.++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            4458999999999999996663         35789999987543111           123445666777888999999


Q ss_pred             EeEEEEec----CeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------
Q 043709           94 IIGCCVEK----GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------  137 (253)
Q Consensus        94 ~~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------  137 (253)
                      +++++...    ...++||||+ +|+|.+++....  ..+++.....+                                
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~  189 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKN  189 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSC
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCC
Confidence            99999765    4589999999 999999884321  11111111111                                


Q ss_pred             ------------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc
Q 043709          138 ------------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL  175 (253)
Q Consensus       138 ------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~  175 (253)
                                                                ......++.++|||||||++|||++|..||........
T Consensus       190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~  269 (364)
T 3op5_A          190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK  269 (364)
T ss_dssp             TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred             CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence                                                      11223477899999999999999999999875433211


Q ss_pred             chhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          176 TLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                       .........  ........++.+..   ...+..+.+++..||..+|++||++.+|++.|++++.....+...+|.|
T Consensus       270 -~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw  341 (364)
T 3op5_A          270 -YVRDSKIRY--RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDDGKLDL  341 (364)
T ss_dssp             -HHHHHHHHH--HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCCCCCCC
T ss_pred             -HHHHHHHHh--hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcCCccce
Confidence             111110110  11122222222211   1223567788888999999999999999999999998888877777776

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.93  E-value=4.4e-27  Score=191.65  Aligned_cols=180  Identities=17%  Similarity=0.198  Sum_probs=131.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|..+++.++||||+++++++.+.+.+++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            36799999999999999665    46899999999754   234567788999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+.+|+|.+++.....   ++......+                                                  
T Consensus        85 ~e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~  161 (318)
T 1fot_A           85 MDYIEGGELFSLLRKSQR---FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY  161 (318)
T ss_dssp             ECCCCSCBHHHHHHHTSS---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred             EeCCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence            999999999998843211   111100000                                                  


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++|+|||||++|||++|..||.....  ......+    ... ..          ..+.
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i----~~~-~~----------~~p~  224 (318)
T 1fot_A          162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKI----LNA-EL----------RFPP  224 (318)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHH----HHC-CC----------CCCT
T ss_pred             cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHH----HhC-CC----------CCCC
Confidence                        12334578899999999999999999999864322  1111111    111 00          0111


Q ss_pred             HHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      .....+.+++.+||..||++||     +++++++
T Consensus       225 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          225 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            2345678889999999999999     8899884

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.93  E-value=2.8e-27  Score=193.61  Aligned_cols=188  Identities=22%  Similarity=0.332  Sum_probs=134.0

Q ss_pred             hcCccccCccccccccceEe----eCCCE----EEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQ----VAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      .++|++.+.||+|+||.+++    .+++.    ||+|.+... .....+.+.+|+.+++.++||||+++++++...+ .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            36799999999999999665    34544    577777543 4556788999999999999999999999998754 78


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++++|+.+|+|.+++.....  .+++.....+                                                
T Consensus        93 ~v~~~~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~  170 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  170 (327)
T ss_dssp             EEECCCSSCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred             EEEEecCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence            99999999999998843221  1111111111                                                


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         ......++.++|||||||++|||++ |..||.......  +....     ...        
T Consensus       171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~-----~~~--------  235 (327)
T 3lzb_A          171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSIL-----EKG--------  235 (327)
T ss_dssp             ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHH-----HTT--------
T ss_pred             cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHH-----HcC--------
Confidence                               1123457889999999999999999 898886443221  11111     011        


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                       .........+..+.+++.+||..||.+|||+.++++.|+.+..
T Consensus       236 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          236 -ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             -CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence             1111122234567888999999999999999999999998874

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.93  E-value=3.1e-27  Score=191.21  Aligned_cols=181  Identities=18%  Similarity=0.240  Sum_probs=132.1

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..+.|++.+.||+|+||.++.    .+++.||||++... .....+.+.+|+.+++.+.||||+++++++...+..++||
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            345799999999999999655    46889999999755 3455688999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++++|.+++....    +++.....+                                                   
T Consensus       100 e~~~~~~L~~~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  175 (303)
T 3a7i_A          100 EYLGGGSALDLLEPGP----LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK  175 (303)
T ss_dssp             ECCTTEEHHHHHTTSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC
T ss_pred             EeCCCCcHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccc
Confidence            9999999999884321    111111100                                                   


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ......++.++||||||+++|+|++|..||......  ......    . ...     .+..    
T Consensus       176 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~----~-~~~-----~~~~----  239 (303)
T 3a7i_A          176 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLI----P-KNN-----PPTL----  239 (303)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH----H-HSC-----CCCC----
T ss_pred             cCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHh----h-cCC-----CCCC----
Confidence                          112344678999999999999999999998643221  111111    0 000     0111    


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+..+.+++.+||..||++|||+.++++
T Consensus       240 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  270 (303)
T 3a7i_A          240 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK  270 (303)
T ss_dssp             CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            1123356788899999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.93  E-value=7.5e-28  Score=195.64  Aligned_cols=192  Identities=17%  Similarity=0.178  Sum_probs=130.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe----
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV----  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~----  103 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.+++.++||||+++++++.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46799999999999999654    56889999999764   23345678999999999999999999999876543    


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      .++||||+++|+|.+++....   .+.+.....+                                              
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~  167 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  167 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred             cEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence            499999999999999873211   0111110000                                              


Q ss_pred             ----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                            ......++.++|||||||++|||++|..||........  .    ...........  
T Consensus       168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--~----~~~~~~~~~~~--  239 (311)
T 3ork_A          168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--A----YQHVREDPIPP--  239 (311)
T ss_dssp             --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--H----HHHHHCCCCCH--
T ss_pred             ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--H----HHHhcCCCCCc--
Confidence                                  12234578899999999999999999999864432111  0    11111110000  


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH-HHHhhcccC
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV-SMLSNEIVN  242 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il-~~L~~~~~~  242 (253)
                           .......+..+.+++.+||+.||++||++.+++ ..+......
T Consensus       240 -----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~  282 (311)
T 3ork_A          240 -----SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG  282 (311)
T ss_dssp             -----HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred             -----ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence                 000112345678899999999999999765544 566655533

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.93  E-value=4.3e-27  Score=203.20  Aligned_cols=194  Identities=18%  Similarity=0.184  Sum_probs=132.1

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccccc-------------ccHHHHHHHHHHHHhccCCCcceEeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG-------------QGLEEFKNEMMLIAKLQDINLVRIIG   96 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~~~~   96 (253)
                      ..++|.+++.||+|+||.+++    .+++.||+|++.....             ...+.+.+|+.+++.++||||+++++
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            457899999999999999664    4688999999975421             33567999999999999999999999


Q ss_pred             EEEecCeeEEEEeeCCCCChhhhccCCCCc-------------------------------C--------------CCCc
Q 043709           97 CCVEKGVKILIYEHMPNKSLDYFLFDPANK-------------------------------G--------------RLGW  131 (253)
Q Consensus        97 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------------------~--------------~~~~  131 (253)
                      ++.+.+..++|||||.+|+|.+++......                               .              ..++
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df  193 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDF  193 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence            999999999999999999998776221100                               0              0000


Q ss_pred             cceeee------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          132 GTRVRI------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       132 ~~~~~i------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                      .....+                  ....+.|+.++||||+||++|+|++|..||.....  ..+...+    . .+... 
T Consensus       194 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i----~-~~~~~-  265 (504)
T 3q5i_A          194 GLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQND--QDIIKKV----E-KGKYY-  265 (504)
T ss_dssp             TTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-HCCCC-
T ss_pred             CCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-cCCCC-
Confidence            000000                  11224578899999999999999999999864332  1122111    0 01000 


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH--HHHhhcc
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV--SMLSNEI  240 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il--~~L~~~~  240 (253)
                           .........+..+.+++.+||..||.+|||+++++  .+++...
T Consensus       266 -----~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          266 -----FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             -----CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             -----CCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence                 00000012345688899999999999999999999  4566554

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.93  E-value=1.5e-26  Score=195.39  Aligned_cols=186  Identities=19%  Similarity=0.204  Sum_probs=127.3

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccc--------cccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      ...++|.+.+.||+|+||.+++    .+++.||||++....        ......+.+|+.+|++++||||+++++++. 
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence            4467899999999999999665    568899999997531        112235889999999999999999999975 


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccce---------------------------------------eee----
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTR---------------------------------------VRI----  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~---------------------------------------~~i----  137 (253)
                      .+..++||||+.+|+|.+++.....   +.+...                                       ..+    
T Consensus       211 ~~~~~lv~e~~~~g~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          211 AEDYYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             SSEEEEEEECCTTCBGGGGTSSSCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             cCceEEEEEcCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence            4568999999999999988743221   111100                                       011    


Q ss_pred             ------------------------e---eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC
Q 043709          138 ------------------------Y---ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS  190 (253)
Q Consensus       138 ------------------------~---~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  190 (253)
                                              .   .....|+.++|||||||++|+|++|..||....... .+...+     ..+.
T Consensus       288 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i-----~~~~  361 (419)
T 3i6u_A          288 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQI-----TSGK  361 (419)
T ss_dssp             TTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHH-----HTTC
T ss_pred             cceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHH-----hcCC
Confidence                                    0   123567789999999999999999999986443221 111111     0110


Q ss_pred             ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          191 LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .. ..     .......+..+.+++.+||+.||++|||++++++
T Consensus       362 ~~-~~-----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          362 YN-FI-----PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             CC-CC-----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CC-CC-----chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            00 00     0000123456888999999999999999999986

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.93  E-value=1.9e-27  Score=190.13  Aligned_cols=186  Identities=17%  Similarity=0.255  Sum_probs=131.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe--cCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~~l  106 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|.+...  .....+.+.+|+.+++.++||||+++++++..  .+..++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            46899999999999999554    46899999999754  34456779999999999999999999998854  578999


Q ss_pred             EEeeCCCCChhhhccCCCCc-CCCCccce-----------------------------------------eee-------
Q 043709          107 IYEHMPNKSLDYFLFDPANK-GRLGWGTR-----------------------------------------VRI-------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~-~~~~~~~~-----------------------------------------~~i-------  137 (253)
                      ||||+++|+|.+++...... ..+++...                                         ..+       
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            99999999999987431100 00111000                                         000       


Q ss_pred             ----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                            ......++.++||||||+++|+|++|..||.....  ..+...+     ..+...   
T Consensus       165 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i-----~~~~~~---  234 (279)
T 2w5a_A          165 ILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKI-----REGKFR---  234 (279)
T ss_dssp             HC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH-----HHTCCC---
T ss_pred             eeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHH-----hhcccc---
Confidence                                  11223467889999999999999999999864432  1111111     111111   


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML  236 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L  236 (253)
                            ..+...+..+.+++.+||+.||.+|||+.+|++.+
T Consensus       235 ------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          235 ------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             ------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence                  11122345788899999999999999999999754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.93  E-value=4.3e-27  Score=188.21  Aligned_cols=186  Identities=18%  Similarity=0.191  Sum_probs=131.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|++.+.||+|+||.+++    .++..||+|++...   .......+.+|+.+++.++||||+++++++.+.+..+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            46799999999999999654    46778999999653   233456789999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+++|+|.+++.....   ++......+                                                  
T Consensus        88 ~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~  164 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR  164 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             EecCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence            999999999887732110   111000000                                                  


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......++.++||||||+++|+|++|..||......  ......   ....            ...+
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~---~~~~------------~~~~  227 (279)
T 3fdn_A          165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRI---SRVE------------FTFP  227 (279)
T ss_dssp             ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH---HHTC------------CCCC
T ss_pred             cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHHHH---HhCC------------CCCC
Confidence                         112344678999999999999999999998643221  111111   0000            0111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ...+..+.+++.+||+.||.+|||+.++++  .+.+..
T Consensus       228 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          228 DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence            123356778899999999999999999994  444433

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.93  E-value=1.3e-26  Score=190.80  Aligned_cols=190  Identities=15%  Similarity=0.194  Sum_probs=130.0

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++......    ..+|+.++..+ .||||+++++++.+.+.+++||
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            356799999999999999554    46889999999764322    35688888888 7999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCc-------------------------------CCCCc----c--ceeee--------------
Q 043709          109 EHMPNKSLDYFLFDPANK-------------------------------GRLGW----G--TRVRI--------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~-------------------------------~~~~~----~--~~~~i--------------  137 (253)
                      |||.+|+|.+++......                               ..+-.    .  ..+.+              
T Consensus        96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~  175 (342)
T 2qr7_A           96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG  175 (342)
T ss_dssp             CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence            999999998877332110                               00000    0  00111              


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC-cchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS-LTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                     ......|+.++|||||||++|||++|..||....... ..+...+    . .+..      ....
T Consensus       176 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i----~-~~~~------~~~~  244 (342)
T 2qr7_A          176 LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI----G-SGKF------SLSG  244 (342)
T ss_dssp             CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH----H-HCCC------CCCS
T ss_pred             ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH----c-cCCc------ccCc
Confidence                           0112237789999999999999999999987543221 1122111    0 1110      0111


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhh
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSN  238 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~  238 (253)
                      ......+..+.+++.+||..||++|||+.++++  .+.+
T Consensus       245 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          245 GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            111234467888999999999999999999984  4544

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.93  E-value=5.5e-27  Score=193.48  Aligned_cols=179  Identities=17%  Similarity=0.159  Sum_probs=131.2

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+.+++||
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            5799999999999999654    46899999999754   2345678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceee------------------------------------e---------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I---------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i---------------  137 (253)
                      ||+++|+|.+++.+...   ++......                                    +               
T Consensus       121 e~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~  197 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT  197 (350)
T ss_dssp             ECCTTCBHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred             cCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCccc
Confidence            99999999998843110   11110000                                    0               


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 .+....++.++|||||||++|||++|..||.....  ..+...+    . .+..          ..+..
T Consensus       198 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i----~-~~~~----------~~p~~  260 (350)
T 1rdq_E          198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKI----V-SGKV----------RFPSH  260 (350)
T ss_dssp             CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-HCCC----------CCCTT
T ss_pred             ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHH----H-cCCC----------CCCCC
Confidence                       12344578899999999999999999999864322  1111111    1 1110          01112


Q ss_pred             HHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      .+..+.+++.+||+.||.+||+     +++|++
T Consensus       261 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            3456788999999999999998     888874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.93  E-value=1.5e-26  Score=186.46  Aligned_cols=204  Identities=16%  Similarity=0.159  Sum_probs=141.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEE-EecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCC-VEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~-~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++....  ..+.+.+|+.+++.++|++++..++.+ ...+..+++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e   85 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   85 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence            46899999999999999554    568899999987543  234689999999999988776666655 56678899999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+ +|+|.+++.....  .+++.....+                                                    
T Consensus        86 ~~-~~~L~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~  162 (296)
T 3uzp_A           86 LL-GPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR  162 (296)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             ec-CCCHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence            99 8999998842111  0111110000                                                    


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCC-CcchhhhhhHhhhcCCCccc
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTN-SLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~  193 (253)
                                             ......++.++|||||||++|||++|..||...... .......+.......     
T Consensus       163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-----  237 (296)
T 3uzp_A          163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-----  237 (296)
T ss_dssp             TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-----
T ss_pred             cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-----
Confidence                                   111224677899999999999999999999765432 222222221111100     


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                       ..+...    ...+..+.+++.+||+.||++|||+++|++.|+++......+..-+|.|
T Consensus       238 -~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~~~~~dw  292 (296)
T 3uzp_A          238 -PIEVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW  292 (296)
T ss_dssp             -CHHHHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCCSSCCCGG
T ss_pred             -chHHHH----hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCcccccccc
Confidence             000001    1223568889999999999999999999999999998888777767776

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.93  E-value=7.6e-27  Score=187.05  Aligned_cols=190  Identities=17%  Similarity=0.188  Sum_probs=133.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc------cccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .++|++.+.||+|+||.++.    .+++.||+|.+....      ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            35799999999999999655    368899999997542      12467899999999999999999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccc----------------------------------------eeee-------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGT----------------------------------------RVRI-------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~----------------------------------------~~~i-------  137 (253)
                      +++|||+++++|.+++.....   +++..                                        ...+       
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEeecCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            999999999999988732110   00000                                        0111       


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           ......++.++||||||+++|+|++|..||.....  ......+    . ...      
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~----~-~~~------  227 (283)
T 3bhy_A          161 KIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--QETLTNI----S-AVN------  227 (283)
T ss_dssp             ECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHH----H-TTC------
T ss_pred             eccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--HHHHHHh----H-hcc------
Confidence                                 11234577899999999999999999999864322  1111111    0 000      


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ...........+..+.+++.+||..||++|||+.++++  .++++.
T Consensus       228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          228 YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            00000001122356788999999999999999999995  566654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.93  E-value=3.1e-27  Score=193.60  Aligned_cols=195  Identities=17%  Similarity=0.224  Sum_probs=131.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++....  ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            36799999999999999654    458899999986542  333456889999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+.+++|..++.....   +++.....+                                                   
T Consensus       104 e~~~~~~l~~~~~~~~~---~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  180 (331)
T 4aaa_A          104 EFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV  180 (331)
T ss_dssp             ECCSEEHHHHHHHSTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             ecCCcchHHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence            99999988887532110   111100000                                                   


Q ss_pred             --------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh----------------hh
Q 043709          138 --------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN----------------LW  186 (253)
Q Consensus       138 --------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~----------------~~  186 (253)
                                    ... ...++.++|||||||++|+|++|..||.......  ........                ..
T Consensus       181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (331)
T 4aaa_A          181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID--QLYHIMMCLGNLIPRHQELFNKNPVF  258 (331)
T ss_dssp             ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred             cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCChhhhhHhhhcccc
Confidence                          011 1257889999999999999999999986543221  11110000                00


Q ss_pred             cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          187 NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....................+..+.+++.+||+.||++|||++++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             TTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            001111111110001111134567889999999999999999999884

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.93  E-value=9e-26  Score=185.51  Aligned_cols=203  Identities=18%  Similarity=0.176  Sum_probs=137.0

Q ss_pred             HHHHhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHh--ccCCCcceEeEEEEecC----
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAK--LQDINLVRIIGCCVEKG----  102 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~~~~~~~~~~----  102 (253)
                      -....++|++.+.||+|+||.+++  .+++.||||++...   ....+.+|..++..  ++||||+++++++...+    
T Consensus        37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           37 QRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred             cccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence            344557899999999999999655  57899999999743   34678889999887  68999999999998775    


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCc-----------------------------C--CCCc---------cceeee-----
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANK-----------------------------G--RLGW---------GTRVRI-----  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~-----------------------------~--~~~~---------~~~~~i-----  137 (253)
                      ..++||||+++|+|.+++.+....                             +  ..+.         .....+     
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~  193 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  193 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             eeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCC
Confidence            799999999999999987431100                             0  0000         000000     


Q ss_pred             ----------------------------eeecC------ccccccceeehhHHHHHHHhC----------CCCcCcCCCC
Q 043709          138 ----------------------------YALHG------VFSIKSDVFSFGVLLLETLSS----------KKNAHFYNTN  173 (253)
Q Consensus       138 ----------------------------~~~~~------~~~~~~DiwSlG~~l~ell~~----------~~p~~~~~~~  173 (253)
                                                  .....      .++.++|||||||++|||++|          ..||......
T Consensus       194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~  273 (342)
T 1b6c_B          194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  273 (342)
T ss_dssp             CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence                                        00000      233679999999999999999          5666544332


Q ss_pred             CcchhhhhhHhhhcCCCccccccccCCCC-CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          174 SLTLLGYVIWNLWNDGSLWDLMDPMLQTE-ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      ........ ... .....    .+..... .....+..+.+++.+||+.||++|||+.+|++.|+.+...
T Consensus       274 ~~~~~~~~-~~~-~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          274 DPSVEEMR-KVV-CEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             SCCHHHHH-HHH-TTSCC----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cccHHHHH-HHH-HHHHh----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            22111111 111 11111    1111111 1235677889999999999999999999999999998754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.93  E-value=4e-27  Score=192.88  Aligned_cols=197  Identities=17%  Similarity=0.165  Sum_probs=128.3

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ....++|++.+.||+|+||.+++    .+++.||||++....  ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            34557899999999999999665    478899999997542  333456889999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccce-----------------------------------------eee-------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTR-----------------------------------------VRI-------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~-----------------------------------------~~i-------  137 (253)
                      +||||+. |+|.+++.....   +.+...                                         +.+       
T Consensus       110 lv~e~~~-~~L~~~~~~~~~---~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~  185 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKNPD---VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR  185 (329)
T ss_dssp             EEEECCS-EEHHHHHHHCTT---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred             EEEecCC-CCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence            9999998 588887732210   000000                                         111       


Q ss_pred             ----------------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCcc
Q 043709          138 ----------------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLW  192 (253)
Q Consensus       138 ----------------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~  192 (253)
                                            ... ...++.++|||||||++|||++|..||......  ...........  ......
T Consensus       186 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          186 AFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI--DQLFKIFEVLGLPDDTTWP  263 (329)
T ss_dssp             HHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCTTTST
T ss_pred             ccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH--HHHHHHHHHhCCCchhhhh
Confidence                                  111 234789999999999999999999998654321  11111111110  000000


Q ss_pred             ccc--------cccCCCCC-----CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 DLM--------DPMLQTEA-----SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ~~~--------~~~~~~~~-----~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...        .+......     .......+.+++.+||+.||.+|||++++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            000        00000000     0113456788999999999999999999986

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.93  E-value=1e-27  Score=194.96  Aligned_cols=178  Identities=22%  Similarity=0.221  Sum_probs=123.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||++++    .+++.||||++...  ..........|+..+..+ .||||+++++++.+.+.+++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            6799999999999999665    46899999998654  233344566677666665 8999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+ +|+|.+++.....  .+++.....+                                                   
T Consensus       137 e~~-~~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~  213 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAWGA--SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG  213 (311)
T ss_dssp             ECC-CCBHHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred             ecc-CCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence            999 5688877633111  1121111111                                                   


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ....+.++.++|||||||++|||++|..|+.....          ......+..        ......
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~~~~~~~~--------~~~~~~  275 (311)
T 3p1a_A          214 EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG----------WQQLRQGYL--------PPEFTA  275 (311)
T ss_dssp             -CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----------HHHHTTTCC--------CHHHHT
T ss_pred             cccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----------HHHHhccCC--------Cccccc
Confidence                        11223578899999999999999999776543211          111111111        111111


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+++.+||+.||++|||++++++
T Consensus       276 ~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          276 GLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            23467888999999999999999999986

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.93  E-value=6.4e-27  Score=192.69  Aligned_cols=182  Identities=20%  Similarity=0.249  Sum_probs=126.7

Q ss_pred             hcCccccCccccccccceEe---eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccC--CCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQD--INLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H--~nIv~~~~~~~~~~~~~lv  107 (253)
                      .+.|++.+.||+|+||.+++   .+++.||||++...  .....+.+.+|+.+++.++|  |||+++++++...+..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            45699999999999999665   46889999999754  33445779999999999976  9999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      || +.+|+|.+++.....   +++.....+                                                  
T Consensus        88 ~e-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~  163 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTS  163 (343)
T ss_dssp             EC-CCSEEHHHHHHHSCC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC------
T ss_pred             Ee-CCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCccccc
Confidence            99 567899988743211   111100000                                                  


Q ss_pred             ----------------ee-----------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC
Q 043709          138 ----------------YA-----------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS  190 (253)
Q Consensus       138 ----------------~~-----------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  190 (253)
                                      ..           ....++.++|||||||++|||++|..||.........+     ....    
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-----~~~~----  234 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL-----HAII----  234 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH-----HHHH----
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHH-----HHHh----
Confidence                            00           11557889999999999999999999986432211111     1111    


Q ss_pred             ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          191 LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                           ++......+......+.+++.+||+.||.+|||+.++++
T Consensus       235 -----~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          235 -----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             -----CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -----cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence                 111111111122346778888999999999999999985

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.93  E-value=3.6e-27  Score=194.78  Aligned_cols=181  Identities=19%  Similarity=0.208  Sum_probs=129.8

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..++|++.+.||+|+||++++    .+++.||||++...   .....+.+.+|..+++.+ .||||+++++++.+.+.++
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            347899999999999999664    46889999999754   344567788999999998 6999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i------------  137 (253)
                      +||||+.+|+|..++.....   ++......                                    +            
T Consensus       101 lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~  177 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN  177 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred             EEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence            99999999999888732110   11100000                                    0            


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       .+....|+.++|||||||++|||++|..||.....  ..+...+    .. ...         
T Consensus       178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i----~~-~~~---------  241 (353)
T 3txo_A          178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAI----LN-DEV---------  241 (353)
T ss_dssp             --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH-CCC---------
T ss_pred             CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--HHHHHHH----Hc-CCC---------
Confidence                             11233478899999999999999999999864432  1121111    11 000         


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCH------HHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTM------LEIVS  234 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~------~~il~  234 (253)
                       ..+......+.+++.+||..||.+||++      +++++
T Consensus       242 -~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          242 -VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             -CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence             0111234567888899999999999998      77774

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.93  E-value=2.3e-27  Score=195.46  Aligned_cols=198  Identities=15%  Similarity=0.144  Sum_probs=128.1

Q ss_pred             hcCccccCccccccccceEee-------CCCEEEEEEecccccc-----------cHHHHHHHHHHHHhccCCCcceEeE
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQSGQ-----------GLEEFKNEMMLIAKLQDINLVRIIG   96 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~~~~   96 (253)
                      .++|++.+.||+|+||.+++.       ++..+|||++......           ....+.+|+..++.++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            357999999999999996652       6778999999754221           1234678888999999999999999


Q ss_pred             EEEe----cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------
Q 043709           97 CCVE----KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------  137 (253)
Q Consensus        97 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------  137 (253)
                      ++..    .+..++||||+ +|+|.+++....   .+++.....+                                   
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~  191 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQ  191 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTS
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCc
Confidence            9988    67899999999 999999884321   1111111100                                   


Q ss_pred             ---------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchh
Q 043709          138 ---------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL  178 (253)
Q Consensus       138 ---------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~  178 (253)
                                                             ......++.++|||||||++|||++|..||...........
T Consensus       192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~  271 (345)
T 2v62_A          192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ  271 (345)
T ss_dssp             EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred             EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence                                                   11223478899999999999999999999864333222111


Q ss_pred             hhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          179 GYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      ... .....  ...........   ....+..+.+++.+||..||++|||+++|++.|+.....
T Consensus       272 ~~~-~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  329 (345)
T 2v62_A          272 TAK-TNLLD--ELPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP  329 (345)
T ss_dssp             HHH-HHHHH--TTTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred             HHH-Hhhcc--cccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence            111 11100  00000000000   012345788889999999999999999999999987643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.93  E-value=7.2e-28  Score=196.83  Aligned_cols=197  Identities=18%  Similarity=0.239  Sum_probs=133.3

Q ss_pred             CCcccccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEe
Q 043709           21 SCIPFFSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRII   95 (253)
Q Consensus        21 ~~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~   95 (253)
                      .....+++.++....++|++.+.||+|+||.+++    .+++.||||++... ....+.+.+|+.+++.+ +||||++++
T Consensus         9 ~~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~   87 (326)
T 2x7f_A            9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYY   87 (326)
T ss_dssp             -------CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEE
T ss_pred             CcchhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeee
Confidence            3445556666777788999999999999999655    47889999999754 33457899999999999 799999999


Q ss_pred             EEEEe------cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------
Q 043709           96 GCCVE------KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------  137 (253)
Q Consensus        96 ~~~~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------  137 (253)
                      +++..      .+..++||||+.+|+|.+++..... ..+.......+                                
T Consensus        88 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~  166 (326)
T 2x7f_A           88 GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA  166 (326)
T ss_dssp             EEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTC
T ss_pred             eEEeeccCccccceEEEEEEcCCCCcHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCC
Confidence            99987      4679999999999999998843210 01111100000                                


Q ss_pred             ---------------------------------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhh
Q 043709          138 ---------------------------------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG  179 (253)
Q Consensus       138 ---------------------------------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~  179 (253)
                                                       ..     ....++.++|||||||++|+|++|..||......  ....
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~  244 (326)
T 2x7f_A          167 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--RALF  244 (326)
T ss_dssp             CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHH
T ss_pred             CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHH
Confidence                                             00     1345778899999999999999999998643221  1111


Q ss_pred             hhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          180 YVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..    . ........        ....+..+.+++.+||..||.+||++.++++
T Consensus       245 ~~----~-~~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          245 LI----P-RNPAPRLK--------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HH----H-HSCCCCCS--------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             Hh----h-cCccccCC--------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            00    0 01111110        1122356788889999999999999999986

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.93  E-value=9.1e-27  Score=187.34  Aligned_cols=184  Identities=19%  Similarity=0.231  Sum_probs=126.5

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe----cCeeEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE----KGVKIL  106 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~----~~~~~l  106 (253)
                      .|.+.+.||+|+||.+++    .++..||+|.+...  .....+.+.+|+.+++.++||||+++++++..    ...+++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            378888999999999655    56789999999754  34556789999999999999999999999875    356899


Q ss_pred             EEeeCCCCChhhhccCCCCc----------------------C------CCCc--------cceeee-------------
Q 043709          107 IYEHMPNKSLDYFLFDPANK----------------------G------RLGW--------GTRVRI-------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~----------------------~------~~~~--------~~~~~i-------------  137 (253)
                      ||||+++|+|.+++......                      +      .+..        .....+             
T Consensus       107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~  186 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc
Confidence            99999999998887321100                      0      0000        000000             


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ....+.++.++|||||||++|+|++|..||........ ...     ....+....        ...
T Consensus       187 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~-----~~~~~~~~~--------~~~  252 (290)
T 1t4h_A          187 AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYR-----RVTSGVKPA--------SFD  252 (290)
T ss_dssp             BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHH-----HHTTTCCCG--------GGG
T ss_pred             cccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-HHH-----HHhccCCcc--------ccC
Confidence                         11223477899999999999999999999864332111 111     111111111        111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+..+.+++.+||+.||.+|||++++++
T Consensus       253 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          253 KVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             GCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            112246788999999999999999999986

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.93  E-value=1e-26  Score=190.23  Aligned_cols=194  Identities=13%  Similarity=0.125  Sum_probs=135.5

Q ss_pred             cHHHHHHHhcCcccc-CccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           27 SLASISAATDNFSME-NKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        27 ~~~~l~~~~~~~~~~-~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      .+.......+.|.+. +.||+|+||.+++    .+++.||+|++...  .......+.+|+.+++.+ .||||+++++++
T Consensus        19 ~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             CSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             HHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            334444555678877 8899999999654    46899999999754  344567899999999999 579999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------  137 (253)
                      ...+..++||||+.+|+|.+++..... ..+++.....+                                         
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~D  177 (327)
T 3lm5_A           99 ENTSEIILILEYAAGGEIFSLCLPELA-EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVD  177 (327)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred             EeCCeEEEEEEecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEee
Confidence            999999999999999999998843211 11111111100                                         


Q ss_pred             --------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 --------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 --------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                                ......++.++|||||||++|||++|..||......  .....+ ...  .   
T Consensus       178 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i-~~~--~---  249 (327)
T 3lm5_A          178 FGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ--ETYLNI-SQV--N---  249 (327)
T ss_dssp             GGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH-HHT--C---
T ss_pred             CccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch--HHHHHH-Hhc--c---
Confidence                                      112345778999999999999999999998643321  111111 000  0   


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                           ..............+.+++.+||+.||.+|||++++++
T Consensus       250 -----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          250 -----VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             -----CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -----cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence                 01111111233456788999999999999999999985

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.4e-25  Score=183.92  Aligned_cols=207  Identities=18%  Similarity=0.195  Sum_probs=133.8

Q ss_pred             HHHHHHhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhc--cCCCcceEeEEEEec---
Q 043709           29 ASISAATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL--QDINLVRIIGCCVEK---  101 (253)
Q Consensus        29 ~~l~~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~~~~~~~~~---  101 (253)
                      ..-....++|++.+.||+|+||.+++  ..++.||||++...   ....+..|..++..+  +||||+++++++...   
T Consensus        30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~  106 (337)
T 3mdy_A           30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS  106 (337)
T ss_dssp             HHHTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred             ccccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence            33344557899999999999999655  56899999999643   334556666666654  899999999999877   


Q ss_pred             -CeeEEEEeeCCCCChhhhccCCCCc-----------------------------C--CCCcc---------ceeee---
Q 043709          102 -GVKILIYEHMPNKSLDYFLFDPANK-----------------------------G--RLGWG---------TRVRI---  137 (253)
Q Consensus       102 -~~~~lv~e~~~~g~L~~~l~~~~~~-----------------------------~--~~~~~---------~~~~i---  137 (253)
                       +.+++||||+.+|+|.++++.....                             +  ..+..         ....+   
T Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  186 (337)
T 3mdy_A          107 WTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL  186 (337)
T ss_dssp             GCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred             CCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence             7899999999999999887321100                             0  00000         00000   


Q ss_pred             ------------------------------eeecCcccc------ccceeehhHHHHHHHhC----------CCCcCcCC
Q 043709          138 ------------------------------YALHGVFSI------KSDVFSFGVLLLETLSS----------KKNAHFYN  171 (253)
Q Consensus       138 ------------------------------~~~~~~~~~------~~DiwSlG~~l~ell~~----------~~p~~~~~  171 (253)
                                                    ......++.      ++|||||||++|||++|          ..||....
T Consensus       187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~  266 (337)
T 3mdy_A          187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV  266 (337)
T ss_dssp             TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence                                          000111122      38999999999999999          55554332


Q ss_pred             CCCcchhhhhhHhhhcCCCccccccccCCC-CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          172 TNSLTLLGYVIWNLWNDGSLWDLMDPMLQT-EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      .........  .........    .+.... .....++..+.+++.+||+.||.+|||+.+|++.|+.+.+..+
T Consensus       267 ~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  334 (337)
T 3mdy_A          267 PSDPSYEDM--REIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD  334 (337)
T ss_dssp             CSSCCHHHH--HHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred             CCCCchhhh--HHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence            222111111  111111111    111111 1123667789999999999999999999999999999986654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.93  E-value=3.7e-27  Score=189.02  Aligned_cols=181  Identities=17%  Similarity=0.176  Sum_probs=128.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++...  .......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            46799999999999999655    46899999999754  334456789999999999 899999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCc-CCCCccc-----------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANK-GRLGWGT-----------------------------------------------------  133 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~-~~~~~~~-----------------------------------------------------  133 (253)
                      |||+++|+|.+++...... ..+++..                                                     
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            9999999999987431000 0001000                                                     


Q ss_pred             --eeee-------------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh
Q 043709          134 --RVRI-------------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL  185 (253)
Q Consensus       134 --~~~i-------------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~  185 (253)
                        ...+                         .. ....++.++|||||||++|+|++|..++....     ...     .
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~-----~  239 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD-----QWH-----E  239 (289)
T ss_dssp             CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH-----HHH-----H
T ss_pred             ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh-----HHH-----H
Confidence              0011                         00 11245579999999999999999987653221     111     1


Q ss_pred             hcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          186 WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+...         ..+...+..+.+++.+||+.||++|||+.++++
T Consensus       240 ~~~~~~~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          240 IRQGRLP---------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHTTCCC---------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHcCCCC---------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            1111111         111123456788999999999999999999985

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.93  E-value=3.4e-27  Score=189.00  Aligned_cols=185  Identities=19%  Similarity=0.265  Sum_probs=131.1

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe---------
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE---------  100 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~---------  100 (253)
                      ..++|++.+.||+|+||.+++    .+++.||+|.+....    +.+.+|+.+++.++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            345799999999999999555    368999999997543    356789999999999999999998864         


Q ss_pred             -------cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------
Q 043709          101 -------KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------  137 (253)
Q Consensus       101 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------  137 (253)
                             .+.++++|||+++|+|.+++.... ...+++.....+                                    
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl  163 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKI  163 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEE
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEE
Confidence                   445899999999999999984321 111222111111                                    


Q ss_pred             ----------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC
Q 043709          138 ----------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ----------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~  189 (253)
                                                  ......++.++||||||+++|||++|..|+.....        . .......
T Consensus       164 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--------~-~~~~~~~  234 (284)
T 2a19_B          164 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--------F-FTDLRDG  234 (284)
T ss_dssp             CCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH--------H-HHHHHTT
T ss_pred             CcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH--------H-HHHhhcc
Confidence                                        11223467899999999999999999988642110        0 0111111


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      .        ..    ...+..+.+++.+||+.||.+|||+.++++.|..+.....
T Consensus       235 ~--------~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          235 I--------IS----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             C--------CC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             c--------cc----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence            1        11    1123457788889999999999999999999998875544

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.93  E-value=1.3e-26  Score=185.86  Aligned_cols=186  Identities=17%  Similarity=0.141  Sum_probs=133.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.++.    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            6799999999999999655    35778999999653   2334567999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+++|+|.+++.....   ++......+                                                   
T Consensus        94 e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  170 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGR---FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR  170 (284)
T ss_dssp             CCCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBC
T ss_pred             EeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccc
Confidence            99999999888732110   111000000                                                   


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ......++.++||||||+++|+|++|..||......  .....+    .. ..      .    ..+.
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~----~~-~~------~----~~~~  233 (284)
T 2vgo_A          171 TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRI----VN-VD------L----KFPP  233 (284)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH----HT-TC------C----CCCT
T ss_pred             cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHH----hc-cc------c----CCCC
Confidence                        112345788999999999999999999998643221  111111    10 00      0    1112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhccc
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIV  241 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~  241 (253)
                      ..+..+.+++.+||..||.+|||++++++  .++....
T Consensus       234 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          234 FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            23456788999999999999999999994  6666553

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.93  E-value=1.1e-26  Score=194.42  Aligned_cols=181  Identities=20%  Similarity=0.247  Sum_probs=125.8

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhcc--CCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQ--DINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..|++.+.||+|+||.+++   ..++.||||++...  .....+.+.+|+.+++.+.  ||||+++++++...+.+++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            4599999999999999665   35889999999754  3445678999999999996  599999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      | +.+|+|.+++.....   +.+.....+                                                   
T Consensus       136 E-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~  211 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSV  211 (390)
T ss_dssp             E-CCSEEHHHHHHHCSS---CCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC-------
T ss_pred             e-cCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccc
Confidence            9 667899888743211   111000000                                                   


Q ss_pred             ---------------eee-----------cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 ---------------YAL-----------HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 ---------------~~~-----------~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                     .+.           ...++.++|||||||++|||++|..||.........+     .....    
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~-----~~~~~----  282 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL-----HAIID----  282 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH-----HHHHC----
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHH-----HHHhC----
Confidence                           000           1357889999999999999999999986432211111     11111    


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                           +......+......+.+++.+||..||.+|||+.++++
T Consensus       283 -----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          283 -----PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             -----TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -----ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence                 11111111111346778889999999999999999984

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.93  E-value=3.1e-27  Score=194.54  Aligned_cols=183  Identities=20%  Similarity=0.238  Sum_probs=130.1

Q ss_pred             HHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecC
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKG  102 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~  102 (253)
                      .....++|++.+.||+|+||.+++    .+++.||||+++..   .....+.+..|..++..+ +||||+++++++.+.+
T Consensus        12 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             ----CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence            345567999999999999999655    46889999999754   234567788999999987 8999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee---------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI---------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i---------  137 (253)
                      .+++||||+++|+|.+++.....   +++....                                    .+         
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            99999999999999988732110   0000000                                    00         


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          ......++.++|+|||||++|||++|..||.....  ..+...+    ....       .
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i----~~~~-------~  235 (345)
T 1xjd_A          169 MLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSI----RMDN-------P  235 (345)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HHCC-------C
T ss_pred             ccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH----HhCC-------C
Confidence                                12334578899999999999999999999864332  1111111    1110       0


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHH-HHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTML-EIV  233 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~-~il  233 (253)
                      .    .+......+.+++.+||..||++||++. +|+
T Consensus       236 ~----~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          236 F----YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             C----CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             C----CCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            1    1112345678899999999999999997 665

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.93  E-value=2.2e-26  Score=189.54  Aligned_cols=186  Identities=12%  Similarity=0.197  Sum_probs=128.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|..+++.+ +||||+++++++.+.+.+++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            36799999999999999655    46889999999754   234456788999999988 89999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e-------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I-------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i-------------  137 (253)
                      ||||+++|+|.+++....   .++......                                    +             
T Consensus        88 v~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             EECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred             EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence            999999999988873211   011000000                                    0             


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc---chhhhhhHhhhcCCCcccccccc
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL---TLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                      .+....++.++|+|||||++|||++|..||........   ...... ........        
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-~~~i~~~~--------  235 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-FQVILEKQ--------  235 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH-HHHHHHCC--------
T ss_pred             CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH-HHHHHcCC--------
Confidence                            12234578899999999999999999999965322110   011111 11110110        


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCH------HHHHH
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTM------LEIVS  234 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~------~~il~  234 (253)
                        ...+...+..+.+++.+||..||.+||++      +++++
T Consensus       236 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~  275 (345)
T 3a8x_A          236 --IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  275 (345)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred             --CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence              01112234567889999999999999996      66663

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.93  E-value=9.2e-27  Score=190.55  Aligned_cols=180  Identities=18%  Similarity=0.166  Sum_probs=123.9

Q ss_pred             hcCccccCccccccccceEe-------eCCCEEEEEEecccc----cccHHHHHHHHHHHHhccCCCcceEeEEEEecCe
Q 043709           35 TDNFSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQS----GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~  103 (253)
                      .++|++.+.||+|+||.+++       .+++.||+|++....    ......+.+|+.+++.++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46899999999999999654       478899999997542    2344568899999999999999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccce------------------------------------eee----------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTR------------------------------------VRI----------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------------------------------------~~i----------  137 (253)
                      +++||||+.+|+|.+++.....   +.....                                    ..+          
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~  172 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLEREGI---FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI  172 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred             EEEEEeCCCCCcHHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence            9999999999999887732110   000000                                    000          


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         ......++.++|||||||++|||++|..||.....  ......+    ....         
T Consensus       173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i----~~~~---------  237 (327)
T 3a62_A          173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR--KKTIDKI----LKCK---------  237 (327)
T ss_dssp             ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH----HHTC---------
T ss_pred             cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH--HHHHHHH----HhCC---------
Confidence                               12234578899999999999999999999864332  1111111    1000         


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                        ...+......+.+++.+||..||.+||     ++.++++
T Consensus       238 --~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          238 --LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             --CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             --CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence              011112345678899999999999999     7788875

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.93  E-value=1.5e-27  Score=201.88  Aligned_cols=193  Identities=12%  Similarity=0.097  Sum_probs=134.3

Q ss_pred             HHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEe
Q 043709           28 LASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE  100 (253)
Q Consensus        28 ~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~  100 (253)
                      +.++....++|++.+.||+|+||++++    .+++.||+|++...   .....+.+.+|..++..++||||+++++++.+
T Consensus        66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD  145 (437)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred             hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence            334445567999999999999999655    45789999999753   22333458899999999999999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+.+++|||||++|+|.+++.....  .+++.....+                                           
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~~--~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~  223 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFED--RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCL  223 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHHccC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence            9999999999999999999854211  1111111000                                           


Q ss_pred             -----------------------eee-----cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC
Q 043709          138 -----------------------YAL-----HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 -----------------------~~~-----~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~  189 (253)
                                             .+.     ...|+.++|||||||++|||++|..||......  .....+.....   
T Consensus       224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~~~---  298 (437)
T 4aw2_A          224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV--ETYGKIMNHKE---  298 (437)
T ss_dssp             ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTHHH---
T ss_pred             hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh--HHHHhhhhccc---
Confidence                                   111     345788999999999999999999998744321  11111100000   


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCC--CCCHHHHHH
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATD--RPTMLEIVS  234 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPs~~~il~  234 (253)
                         ....+.    .....+..+.+++.+||..+|++  ||+++++++
T Consensus       299 ---~~~~p~----~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          299 ---RFQFPT----QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             ---HCCCCS----SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             ---cccCCc----ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence               000011    11123456788888899888888  999999985

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.93  E-value=2.1e-26  Score=187.16  Aligned_cols=184  Identities=16%  Similarity=0.235  Sum_probs=125.0

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ...++|++.+.||+|+||.++.    .+++.||+|.+...  ...+.+.+|+.+++.++||||+++++++...+..+++|
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence            3556899999999999999554    45899999999753  34578999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+.+|+|.+++.....  .+++.....+                                                   
T Consensus       104 e~~~~~~L~~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (314)
T 3com_A          104 EYCGAGSVSDIIRLRNK--TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK  181 (314)
T ss_dssp             ECCTTEEHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred             ecCCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence            99999999998741110  0111110000                                                   


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                                    ......++.++||||||+++|+|++|..||.......  .   . .......      .+..  ..
T Consensus       182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~---~-~~~~~~~------~~~~--~~  247 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--A---I-FMIPTNP------PPTF--RK  247 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--H---H-HHHHHSC------CCCC--SS
T ss_pred             cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--H---H-HHHhcCC------Cccc--CC
Confidence                          1122346789999999999999999999986432211  0   0 0000000      0000  11


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ....+..+.+++.+||..||.+|||+.++++
T Consensus       248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            1223456788999999999999999999985

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.93  E-value=2.5e-26  Score=185.08  Aligned_cols=205  Identities=17%  Similarity=0.164  Sum_probs=136.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEE-EecCeeEEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCC-VEKGVKILIY  108 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~-~~~~~~~lv~  108 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++....  ..+.+.+|+.+++.++|+|++..++.+ ...+..+++|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            447899999999999999554    568899999876532  223588999999999888777776655 5667889999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+ +|+|.+++......  +++.....+                                                   
T Consensus        85 e~~-~~~L~~~~~~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSC--CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             Ecc-CCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence            999 89999987421110  111110000                                                   


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC-cchhhhhhHhhhcCCCcc
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS-LTLLGYVIWNLWNDGSLW  192 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~  192 (253)
                                              ......++.++|||||||++|||++|..||....... ............. ..  
T Consensus       162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~--  238 (296)
T 4hgt_A          162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TP--  238 (296)
T ss_dssp             TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-SC--
T ss_pred             ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc-ch--
Confidence                                    1112346778999999999999999999997654332 1222111111100 00  


Q ss_pred             ccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                         .+...    ...+..+.+++.+||+.||++|||+++|++.|+++......+..-+|.|
T Consensus       239 ---~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw  292 (296)
T 4hgt_A          239 ---IEVLC----KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW  292 (296)
T ss_dssp             ---HHHHT----TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGG
T ss_pred             ---hhhhh----ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccch
Confidence               00000    1123578889999999999999999999999999997777666555555

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.93  E-value=1.8e-27  Score=199.93  Aligned_cols=188  Identities=16%  Similarity=0.143  Sum_probs=132.1

Q ss_pred             HHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG  102 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~  102 (253)
                      ++....++|++.+.||+|+||++++    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+
T Consensus        63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~  142 (410)
T 3v8s_A           63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  142 (410)
T ss_dssp             HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence            4445567899999999999999664    46889999999753   2233456889999999999999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee---------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI---------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i---------  137 (253)
                      .+++|||||++|+|.+++++..    ++.....                                    .+         
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~~~----~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSNYD----VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCCcHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence            9999999999999998874321    0100000                                    00         


Q ss_pred             ---------------------eeecC----ccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcc
Q 043709          138 ---------------------YALHG----VFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLW  192 (253)
Q Consensus       138 ---------------------~~~~~----~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (253)
                                           .+...    .|+.++|||||||++|||++|..||......  .....+.....      
T Consensus       219 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~------  290 (410)
T 3v8s_A          219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--GTYSKIMNHKN------  290 (410)
T ss_dssp             CTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTHHH------
T ss_pred             ccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--hHHHHHHhccc------
Confidence                                 11111    1778999999999999999999998744321  11111100000      


Q ss_pred             ccccccCCCCCCHHHHHHHHHHhccccCCCCCC--CCCHHHHHH
Q 043709          193 DLMDPMLQTEASYPILKRYSNVDLFCFRENATD--RPTMLEIVS  234 (253)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~--RPs~~~il~  234 (253)
                           ..........+..+.+|+.+||..+|.+  ||++++|++
T Consensus       291 -----~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          291 -----SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             -----HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             -----cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence                 0000111123456788888899999998  999999995

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.93  E-value=5.8e-27  Score=196.99  Aligned_cols=198  Identities=13%  Similarity=0.119  Sum_probs=135.8

Q ss_pred             cHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEE
Q 043709           27 SLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCV   99 (253)
Q Consensus        27 ~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~   99 (253)
                      .+.++....++|++.+.||+|+||++++    .+++.||||+++..   .....+.+.+|..++..++||||+++++++.
T Consensus        52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  131 (412)
T 2vd5_A           52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ  131 (412)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence            3445555678999999999999999554    46899999999753   2233456889999999999999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------  137 (253)
                      +.+.+++||||+++|+|.+++.+...  .++......+                                          
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla  209 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKFGE--RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSC  209 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhh
Confidence            99999999999999999999843110  1111110000                                          


Q ss_pred             ------------------------eee-------cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh
Q 043709          138 ------------------------YAL-------HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW  186 (253)
Q Consensus       138 ------------------------~~~-------~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~  186 (253)
                                              .+.       ...|+.++|+|||||++|||++|..||......  .....+.....
T Consensus       210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~~  287 (412)
T 2vd5_A          210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA--ETYGKIVHYKE  287 (412)
T ss_dssp             EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTHHH
T ss_pred             eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH--HHHHHHHhccc
Confidence                                    011       245788999999999999999999998654321  11111100000


Q ss_pred             cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCC---CCHHHHHH--HHhhc
Q 043709          187 NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDR---PTMLEIVS--MLSNE  239 (253)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R---Ps~~~il~--~L~~~  239 (253)
                            ....+.    .....+..+.+++.+||. +|.+|   |++++|++  .++++
T Consensus       288 ------~~~~p~----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i  334 (412)
T 2vd5_A          288 ------HLSLPL----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL  334 (412)
T ss_dssp             ------HCCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred             ------CcCCCc----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence                  000010    112234678889999999 99988   68999884  34444

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.93  E-value=3.4e-27  Score=189.74  Aligned_cols=190  Identities=25%  Similarity=0.326  Sum_probs=126.1

Q ss_pred             hcCccccCccccccccceEee-----CCC--EEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-----NGE--QVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-----~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .++|++.+.||+|+||.+++.     +++  .||||++...   .....+.+.+|+.+++.++||||+++++++...+ .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            467999999999999996542     223  6899999754   3345678999999999999999999999998755 8


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      +++|||+.+|+|.+++.....  .+++.....+                                               
T Consensus        96 ~~v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKHQG--HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHHGG--GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeeEecccCCCHHHHHHhccC--CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence            999999999999988743110  1111111000                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                           ......++.++||||||+++|+|++ |..||.....  ......    ......     
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~----~~~~~~-----  242 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--SQILHK----IDKEGE-----  242 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHH----HHTSCC-----
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--HHHHHH----HHccCC-----
Confidence                                 0112346788999999999999999 8988864422  111111    111110     


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                          ........+..+.+++.+||..||++|||+.++++.|++....
T Consensus       243 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  285 (291)
T 1u46_A          243 ----RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT  285 (291)
T ss_dssp             ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             ----CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence                0111123346788899999999999999999999999988743

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.93  E-value=1.4e-26  Score=190.10  Aligned_cols=176  Identities=16%  Similarity=0.232  Sum_probs=127.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc--------cccHHHHHHHHHHHHhccCCCcceEeEEEEec
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++....        ....+.+.+|+.+++.++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            346899999999999999655    568899999997542        11334678899999999999999999999999


Q ss_pred             CeeEEEEeeCCCC-ChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          102 GVKILIYEHMPNK-SLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      +..++||||+.+| +|.+++.....   +++.....+                                           
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~~~---l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~  178 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAA  178 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTCCC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CEEEEEEEeCCCCccHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence            9999999999777 99888843221   111111111                                           


Q ss_pred             ---------------------eeecCcc-ccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ---------------------YALHGVF-SIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ---------------------~~~~~~~-~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                           ......+ +.++|||||||++|||++|..||......                     .
T Consensus       179 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------------~  237 (335)
T 3dls_A          179 YLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------------V  237 (335)
T ss_dssp             ECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG---------------------T
T ss_pred             ECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH---------------------H
Confidence                                 1112233 77899999999999999999998632110                     0


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM  235 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~  235 (253)
                      ....  ..+...+..+.+++.+||+.||++|||+.++++.
T Consensus       238 ~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          238 EAAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             TTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             hhcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0000  0111134567889999999999999999999973

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.93  E-value=3.4e-26  Score=183.77  Aligned_cols=191  Identities=18%  Similarity=0.191  Sum_probs=134.3

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ...++|++.+.||+|+||.+++    .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus        19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            3446899999999999999655    36889999999754  34456789999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccc---------------------------------------eeee----------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGT---------------------------------------RVRI----------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~---------------------------------------~~~i----------  137 (253)
                      +|||+.+++|.+++.....   +++..                                       ...+          
T Consensus        99 v~e~~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EECCCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEccCCCCHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            9999999999877622110   00000                                       0001          


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       ....+.++.++||||||+++|+|++|..||.....  ..+...+    .. +...      ..
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~----~~-~~~~------~~  242 (287)
T 2wei_A          176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDILKRV----ET-GKYA------FD  242 (287)
T ss_dssp             CCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH-CCCC------CC
T ss_pred             CCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHH----Hc-CCCC------CC
Confidence                             01123467889999999999999999999864332  1111111    11 1000      00


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                      .......+..+.+++.+||..||++|||+.++++  .+++.
T Consensus       243 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            0001123456788999999999999999999996  45543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.93  E-value=1.1e-26  Score=206.08  Aligned_cols=193  Identities=21%  Similarity=0.247  Sum_probs=137.0

Q ss_pred             HHHHHhcCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      ++....++|++.+.||+|+||.+++.       .+..||||.+... .....+.+.+|+.+++.++||||+++++++. +
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~  462 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E  462 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence            44455677999999999999996652       2457999998754 3444578999999999999999999999985 4


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------  137 (253)
                      +..++||||+++|+|.+++.....  .+++.....+                                            
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~  540 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVRKF--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY  540 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTTT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred             CceEEEEEcCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCee
Confidence            678999999999999998853211  1111111111                                            


Q ss_pred             ----------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccc
Q 043709          138 ----------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDL  194 (253)
Q Consensus       138 ----------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (253)
                                            ......++.++|||||||++|||++ |..||.....  ......+    .. +.    
T Consensus       541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~~i----~~-~~----  609 (656)
T 2j0j_A          541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRI----EN-GE----  609 (656)
T ss_dssp             CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH----HH-TC----
T ss_pred             cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH----Hc-CC----
Confidence                                  1123457789999999999999997 8888764322  1111111    10 10    


Q ss_pred             ccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          195 MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                           ....+..++..+.+++.+||..||++|||+.+|++.|++++.
T Consensus       610 -----~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~  651 (656)
T 2j0j_A          610 -----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  651 (656)
T ss_dssp             -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence                 011112334678889999999999999999999999998864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.93  E-value=9.5e-27  Score=191.09  Aligned_cols=185  Identities=17%  Similarity=0.140  Sum_probs=131.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|.+.+.||+|+||.++.    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            346799999999999999655    45789999999754   23455778999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e-------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I-------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i-------------  137 (253)
                      +|||+.+++|.+++....   .+.+.....                                    +             
T Consensus       119 v~e~~~~~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          119 VLELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             EECCCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEecCCCCCHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence            999999999988773211   011100000                                    0             


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ......++.++||||||+++|||++|..||......  .....+   .....        ..  
T Consensus       196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~---~~~~~--------~~--  260 (335)
T 2owb_A          196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK--ETYLRI---KKNEY--------SI--  260 (335)
T ss_dssp             CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH---HHTCC--------CC--
T ss_pred             ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHH---hcCCC--------CC--
Confidence                            112334677999999999999999999998643221  111111   00000        01  


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhh
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSN  238 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~  238 (253)
                        .......+.+++.+||+.||++|||++++++  .+..
T Consensus       261 --~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~  297 (335)
T 2owb_A          261 --PKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS  297 (335)
T ss_dssp             --CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred             --CccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence              1122346778889999999999999999995  4544

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.92  E-value=1.1e-26  Score=187.20  Aligned_cols=180  Identities=17%  Similarity=0.130  Sum_probs=129.5

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|.+.+.||+|+||.++.    .+++.+|+|++...   .....+.+.+|+.+++.++||||+++++++.+.+..+++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            36799999999999999554    45889999999754   234456789999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+.+++|.+++....   .+++.....+                                                  
T Consensus        94 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           94 LELCRRRSLLELHKRRK---ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             EECCTTCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence            99999999988773211   0111100000                                                  


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ......++.++||||||+++|+|++|..||.......  ..    .... ....          .
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~----~~~~-~~~~----------~  233 (294)
T 2rku_A          171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--TY----LRIK-KNEY----------S  233 (294)
T ss_dssp             CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HH----HHHH-TTCC----------C
T ss_pred             ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH----HHHh-hccC----------C
Confidence                           1122346779999999999999999999986433211  11    1111 1100          0


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+......+.+++.+||+.||++|||++++++
T Consensus       234 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          234 IPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             CccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            11122356778888999999999999999995

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.92  E-value=1.2e-25  Score=183.99  Aligned_cols=196  Identities=17%  Similarity=0.235  Sum_probs=131.3

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEe--cCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVE--KGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~--~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||||++..   ...+.+.+|+.+++.++ ||||+++++++.+  ....+++|
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            5799999999999999654    5789999999974   34567999999999997 9999999999987  56789999


Q ss_pred             eeCCCCChhhhccCCC----------------------------CcC------------CCCccceeee-----------
Q 043709          109 EHMPNKSLDYFLFDPA----------------------------NKG------------RLGWGTRVRI-----------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~----------------------------~~~------------~~~~~~~~~i-----------  137 (253)
                      ||+.+++|.+++..-.                            +..            ..++.....+           
T Consensus       113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  192 (330)
T 3nsz_A          113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA  192 (330)
T ss_dssp             ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCS
T ss_pred             eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccc
Confidence            9999999988762100                            000            0000000000           


Q ss_pred             --------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh-------Hhhhc--------------
Q 043709          138 --------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI-------WNLWN--------------  187 (253)
Q Consensus       138 --------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~-------~~~~~--------------  187 (253)
                              .. ....++.++|||||||++|||++|..||.........+.....       .....              
T Consensus       193 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (330)
T 3nsz_A          193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL  272 (330)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred             cccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhh
Confidence                    11 1245788999999999999999999998654433221111110       00000              


Q ss_pred             CCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          188 DGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .......................+.+++.+||+.||.+|||++++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          273 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00000001111112222234577889999999999999999999996

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.92  E-value=4.2e-27  Score=200.38  Aligned_cols=181  Identities=14%  Similarity=0.148  Sum_probs=122.5

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++...   .......+.+|+.+++.++||||+++++++...+.+++
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            346799999999999999664    56889999999753   33445678899999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccc-------------------------------------eeee------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGT-------------------------------------RVRI------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~-------------------------------------~~~i------------  137 (253)
                      ||||+++|+|..++.....   +++..                                     ...+            
T Consensus       226 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  302 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRERV---FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD  302 (446)
T ss_dssp             EECCCSSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred             EEeeCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence            9999999999877632110   00000                                     0000            


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       .+....|+.++|||||||++|||++|..||.....  ..+...+   .....           
T Consensus       303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i---~~~~~-----------  366 (446)
T 4ejn_A          303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELI---LMEEI-----------  366 (446)
T ss_dssp             ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH---HHCCC-----------
T ss_pred             CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHH---HhCCC-----------
Confidence                             12345688899999999999999999999864332  1111111   00000           


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                       ..+......+.+++.+||+.||.+||     +++++++
T Consensus       367 -~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          367 -RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence             01112345678899999999999999     9999985

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.92  E-value=3.4e-26  Score=198.59  Aligned_cols=187  Identities=17%  Similarity=0.183  Sum_probs=133.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      ..++|++.+.||+|+||.+++    .+++.||+|++...   .......+.+|+.+|+.++||||+++++++.+.+.+++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            346799999999999999655    47899999999753   23445678999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      ||||+++|+|.+++...... .+++.....+                                                 
T Consensus       262 VmEy~~gg~L~~~l~~~~~~-~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~  340 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  340 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEEcCCCCcHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence            99999999999988543211 1111111111                                                 


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     .+....|+.++|||||||++|||++|..||........  ...+.......           ...
T Consensus       341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~~~-----------~~~  407 (576)
T 2acx_A          341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKEV-----------PEE  407 (576)
T ss_dssp             CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHHHC-----------CCC
T ss_pred             cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhhcc-----------ccc
Confidence                           12234578899999999999999999999875433211  01110111000           011


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      .+...+..+.+++.+||..||.+||     ++++|++
T Consensus       408 ~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          408 YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            1123346788899999999999999     7888874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.92  E-value=9.5e-26  Score=189.35  Aligned_cols=182  Identities=15%  Similarity=0.161  Sum_probs=124.7

Q ss_pred             cCcccc-CccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHh-ccCCCcceEeEEEEe----cCeeE
Q 043709           36 DNFSME-NKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAK-LQDINLVRIIGCCVE----KGVKI  105 (253)
Q Consensus        36 ~~~~~~-~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~H~nIv~~~~~~~~----~~~~~  105 (253)
                      ++|.+. +.||+|+||++++    .+++.||||++...     ..+.+|+.++.. .+||||+++++++..    .+.++
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            456665 6899999999654    46889999999632     457788888755 489999999999875    56799


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccce---------------------------------------eee---------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTR---------------------------------------VRI---------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~---------------------------------------~~i---------  137 (253)
                      +|||||.+|+|.+++..... ..+++...                                       +.+         
T Consensus       136 lv~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~  214 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  214 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEEeCCCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence            99999999999998854211 00111100                                       001         


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc--chhhhhhHhhhcCCCcccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL--TLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                         .+....|+.++|||||||++|||++|..||........  .....+    . .+.. .   
T Consensus       215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i----~-~~~~-~---  285 (400)
T 1nxk_A          215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----R-MGQY-E---  285 (400)
T ss_dssp             C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH----H-HTCC-C---
T ss_pred             CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH----H-cCcc-c---
Confidence                               22345688899999999999999999999875443221  111111    0 0000 0   


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        ........++..+.+++.+||..||++|||+.++++
T Consensus       286 --~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          286 --FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             --CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              001111234467888999999999999999999996

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.92  E-value=4.2e-26  Score=188.89  Aligned_cols=104  Identities=25%  Similarity=0.226  Sum_probs=85.2

Q ss_pred             cCCCCCCcccccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc----
Q 043709           16 GKSKESCIPFFSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ----   87 (253)
Q Consensus        16 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~----   87 (253)
                      ....+.....+++.+.....++|++.+.||+|+||.+++    .+++.||||++... ....+.+..|+.+++.+.    
T Consensus        15 ~~~~~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~   93 (360)
T 3llt_A           15 YFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDI   93 (360)
T ss_dssp             -----CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCST
T ss_pred             eeecCccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCC
Confidence            344455677788888888889999999999999999665    47889999999742 344466788999999986    


Q ss_pred             -CCCcceEeEEEEecCeeEEEEeeCCCCChhhhcc
Q 043709           88 -DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLF  121 (253)
Q Consensus        88 -H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  121 (253)
                       ||||+++++++...+..++||||+ +++|.+++.
T Consensus        94 ~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~  127 (360)
T 3llt_A           94 NNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIIT  127 (360)
T ss_dssp             TGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHH
T ss_pred             CCCCeecccceeeECCeeEEEEcCC-CCCHHHHHH
Confidence             999999999999999999999999 889988874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.92  E-value=1.2e-25  Score=181.74  Aligned_cols=188  Identities=15%  Similarity=0.137  Sum_probs=127.2

Q ss_pred             cCcccc-CccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHH-HhccCCCcceEeEEEEe----cCeeE
Q 043709           36 DNFSME-NKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLI-AKLQDINLVRIIGCCVE----KGVKI  105 (253)
Q Consensus        36 ~~~~~~-~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~~~~~~~~----~~~~~  105 (253)
                      ++|.+. +.||+|+||.+++    .+++.||+|++..     ...+.+|+.++ +.+.||||+++++++..    .+..+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            567777 7799999999554    4688999999964     24577899888 45589999999999987    67899


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------ee
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------YA  139 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------~~  139 (253)
                      +||||+++|+|.+++..... ..+++.....+                                              ..
T Consensus        92 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence            99999999999999854221 11111111111                                              22


Q ss_pred             ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccC--CCCCCHHHHHHHHHHhcc
Q 043709          140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML--QTEASYPILKRYSNVDLF  217 (253)
Q Consensus       140 ~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~  217 (253)
                      ....++.++|||||||++|||++|..||.........           ............  ........+..+.+++.+
T Consensus       171 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  239 (299)
T 3m2w_A          171 TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-----------PGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN  239 (299)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHH
T ss_pred             ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-----------HHHHHHHhhccccCCchhcccCCHHHHHHHHH
Confidence            3456889999999999999999999998644321100           000000000000  000001234678889999


Q ss_pred             ccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          218 CFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       218 cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ||+.||++|||++++++  .+.+..
T Consensus       240 ~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          240 LLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             HcccChhhCCCHHHHhcChhhcccc
Confidence            99999999999999995  455544

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.92  E-value=4.3e-26  Score=186.11  Aligned_cols=185  Identities=19%  Similarity=0.196  Sum_probs=125.6

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc--------cccHHHHHHHHHHHHhccCCCcceEeEEEEec
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS--------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++....        ......+.+|+.+++.++||||+++++++...
T Consensus         8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            346799999999999999655    467899999997431        12234588999999999999999999998765


Q ss_pred             CeeEEEEeeCCCCChhhhccCCCCcCCCCccce---------------------------------------eee-----
Q 043709          102 GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTR---------------------------------------VRI-----  137 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~---------------------------------------~~i-----  137 (253)
                      + .++||||+.+|+|.+++.....   +.....                                       ..+     
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~  163 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVVGNKR---LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGH  163 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHSTTCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred             c-eEEEEecCCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence            4 8999999999999887743211   111000                                       111     


Q ss_pred             -----------------------e---eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCc
Q 043709          138 -----------------------Y---ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -----------------------~---~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  191 (253)
                                             .   .....++.++|||||||++|+|++|..||....... .+...+ .    .+..
T Consensus       164 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~-~----~~~~  237 (322)
T 2ycf_A          164 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQI-T----SGKY  237 (322)
T ss_dssp             CEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHH-H----HTCC
T ss_pred             ceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHH-H----hCcc
Confidence                                   0   113457789999999999999999999986443321 111111 0    0000


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      . .     ........+..+.+++.+||..||++|||++++++
T Consensus       238 ~-~-----~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          238 N-F-----IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             C-C-----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             c-c-----CchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            0 0     00000123457888999999999999999999874

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.92  E-value=4.8e-26  Score=181.74  Aligned_cols=180  Identities=18%  Similarity=0.229  Sum_probs=129.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      .++|.+.+.||+|+||.++.    .+++.||||++...   .....+.+.+|+.+++.++||||+++++++...+..+++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            46899999999999999654    36889999999753   234567899999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      |||+.+++|.+++.....   ++......+                                                  
T Consensus        90 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           90 MEYVSGGELFDYICKHGR---VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             EECCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred             EeccCCCcHHHHHhccCC---CCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence            999999999988732110   111100000                                                  


Q ss_pred             --------------eeecCc-cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 --------------YALHGV-FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 --------------~~~~~~-~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                    ...... .+.++||||||+++|+|++|..||.....  ......+    . ....          .
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~----~-~~~~----------~  229 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKI----R-GGVF----------Y  229 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-HCCC----------C
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHh----h-cCcc----------c
Confidence                          011122 36789999999999999999999864321  1111111    0 0000          0


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .+......+.+++.+||+.||++|||+.++++
T Consensus       230 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          230 IPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            11122356778899999999999999999996

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.92  E-value=4.6e-26  Score=187.73  Aligned_cols=193  Identities=17%  Similarity=0.211  Sum_probs=130.7

Q ss_pred             hcCccccCccccccccceEe--eCCCEEEEEEecccccc---c--------------HHHHHHHHHHHHhccCCCcceEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQ---G--------------LEEFKNEMMLIAKLQDINLVRII   95 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~---~--------------~~~~~~E~~~l~~l~H~nIv~~~   95 (253)
                      .++|++.+.||+|+||.+++  .+++.||||++......   .              .+.+.+|+.+++.++||||++++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            46899999999999999554  38999999999754211   1              17899999999999999999999


Q ss_pred             EEEEecCeeEEEEeeCCCCChhhh------ccCCCCcCCCCccceee-----------------e---------------
Q 043709           96 GCCVEKGVKILIYEHMPNKSLDYF------LFDPANKGRLGWGTRVR-----------------I---------------  137 (253)
Q Consensus        96 ~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~~~~~~~-----------------i---------------  137 (253)
                      +++.+.+..++||||+++|+|.++      +.... ...+++.....                 +               
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~  188 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN  188 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence            999999999999999999999998      53210 11111111100                 0               


Q ss_pred             --------------------------------eeecC-cccc-ccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhH
Q 043709          138 --------------------------------YALHG-VFSI-KSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIW  183 (253)
Q Consensus       138 --------------------------------~~~~~-~~~~-~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~  183 (253)
                                                      ..... .++. ++|||||||++|||++|..||...... ......+  
T Consensus       189 ~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~i--  265 (348)
T 2pml_X          189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELFNNI--  265 (348)
T ss_dssp             SCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHHHHH--
T ss_pred             CcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHH--
Confidence                                            11112 4555 899999999999999999998754432 1111111  


Q ss_pred             hhhcCCCc--cc----cccccC---CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          184 NLWNDGSL--WD----LMDPML---QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       184 ~~~~~~~~--~~----~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         .....  ..    ...+..   ........+..+.+++.+||+.||.+|||++++++
T Consensus       266 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          266 ---RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             ---TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ---hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence               11110  00    000000   00011234467888999999999999999999986

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.92  E-value=5.6e-26  Score=183.30  Aligned_cols=186  Identities=15%  Similarity=0.167  Sum_probs=130.7

Q ss_pred             HHhcCccccCccccccccceEe----eCCCEEEEEEecccc---------cccHHHHHHHHHHHHhcc-CCCcceEeEEE
Q 043709           33 AATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---------GQGLEEFKNEMMLIAKLQ-DINLVRIIGCC   98 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~   98 (253)
                      ...++|++.+.||+|+||.+++    .+++.||||++....         ....+.+.+|+.+++++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            3457899999999999999655    468899999997532         122456889999999995 99999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------  137 (253)
                      ...+..++||||+++|+|.+++....   .++......+                                         
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  170 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF  170 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccc
Confidence            99999999999999999999874311   0111110000                                         


Q ss_pred             -----------------------ee------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 -----------------------YA------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 -----------------------~~------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                             ..      ....++.++||||||+++|+|++|..||.....  ......+    .. 
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~----~~-  243 (298)
T 1phk_A          171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRMI----MS-  243 (298)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH-
T ss_pred             hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHHHHHH----hc-
Confidence                                   00      123467899999999999999999999864322  1111111    00 


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +.. .     .........+..+.+++.+||..||.+|||+.++++
T Consensus       244 ~~~-~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          244 GNY-Q-----FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             TCC-C-----CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCc-c-----cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            000 0     001111234467888999999999999999999985

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1e-25  Score=185.75  Aligned_cols=198  Identities=16%  Similarity=0.115  Sum_probs=124.7

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEeccccc-----ccHHHHHHHHHHHHhccCCCcceEeEEEEecC
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG-----QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG  102 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~  102 (253)
                      ....++|++.+.||+|+||.++.    .+++.||||++.....     ...+.+.+|+.+++.++||||+++++++.+.+
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            34457899999999999999665    4588999999975321     12346889999999999999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------  137 (253)
                      ..++||||+.+ +|..++.....  .+++.....+                                             
T Consensus        86 ~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           86 NISLVFDFMET-DLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             CCEEEEECCSE-EHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             ceEEEEEcCCC-CHHHHHHhcCc--CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence            99999999985 88877743221  1111111111                                             


Q ss_pred             --------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc--CCCcccc
Q 043709          138 --------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN--DGSLWDL  194 (253)
Q Consensus       138 --------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  194 (253)
                                          .. ....++.++|||||||++|||++|..||.....  ......+......  ...+...
T Consensus       163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~  240 (346)
T 1ua2_A          163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD--LDQLTRIFETLGTPTEEQWPDM  240 (346)
T ss_dssp             TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCTTTSSST
T ss_pred             cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHcCCCChhhhhhh
Confidence                                01 123478899999999999999999988764432  1111111111100  0111100


Q ss_pred             ------ccccCCCCCC-----HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          195 ------MDPMLQTEAS-----YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       195 ------~~~~~~~~~~-----~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                            .........+     ......+.+++.+||..||++|||++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence                  0000000001     223467888999999999999999999986

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.92  E-value=2.5e-26  Score=189.66  Aligned_cols=181  Identities=19%  Similarity=0.163  Sum_probs=129.9

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..++|++.+.||+|+||++++    .+++.||||++...   .....+.+..|..++..+ +||||+++++++.+.+.++
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            457899999999999999665    35778999999754   335567789999999988 7999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i------------  137 (253)
                      +||||+++|+|.+++.....   ++......                                    +            
T Consensus        98 lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  174 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence            99999999999988732110   11000000                                    0            


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       .+....++.++|+|||||++|||++|..||.....  ..+...+    .. ...         
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i----~~-~~~---------  238 (353)
T 2i0e_A          175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSI----ME-HNV---------  238 (353)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH-CCC---------
T ss_pred             CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHH----Hh-CCC---------
Confidence                             22345678899999999999999999999864322  1222111    11 000         


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                       ..+...+..+.+++.+||..||.+||+     +++|++
T Consensus       239 -~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          239 -AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             -CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             -CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence             111233467888999999999999995     466663

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.92  E-value=9.8e-26  Score=184.92  Aligned_cols=206  Identities=16%  Similarity=0.155  Sum_probs=130.6

Q ss_pred             HhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHH--HHhccCCCcceEeEEEEe-----cCee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMML--IAKLQDINLVRIIGCCVE-----KGVK  104 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~~~~~~~~-----~~~~  104 (253)
                      ..++|++.+.||+|+||.+++  .+++.||||++...   ..+.+..|..+  +..++||||+++++.+..     ....
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            346899999999999999665  57899999999753   23444555554  445899999999986643     2357


Q ss_pred             EEEEeeCCCCChhhhccCCCCc------------------------------CC--CCcc---------ceeee------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK------------------------------GR--LGWG---------TRVRI------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~------------------------------~~--~~~~---------~~~~i------  137 (253)
                      ++||||+++|+|.+++......                              +.  .+..         ....+      
T Consensus        88 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a  167 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS  167 (336)
T ss_dssp             EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence            8999999999999887322110                              00  0000         00000      


Q ss_pred             -------------------------------eeec-------CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhh
Q 043709          138 -------------------------------YALH-------GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG  179 (253)
Q Consensus       138 -------------------------------~~~~-------~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~  179 (253)
                                                     ....       ..++.++|||||||++|||++|..|+............
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~  247 (336)
T 3g2f_A          168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA  247 (336)
T ss_dssp             EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred             eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence                                           0000       23556899999999999999998887655433211111


Q ss_pred             hh-----------hHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          180 YV-----------IWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       180 ~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                      ..           .................  .......+..+.+++.+||+.||++|||++++++.|++++....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~  321 (336)
T 3g2f_A          248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE  321 (336)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred             hhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence            00           00000011111111111  11123466789999999999999999999999999999884443

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.92  E-value=1.3e-25  Score=186.42  Aligned_cols=187  Identities=14%  Similarity=0.204  Sum_probs=129.8

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEeccccc--------ccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG--------QGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      ....++|++.+.||+|+||.+++    .+|+.||||++.....        ...+.+.+|+.+++.+ .||||+++++++
T Consensus        90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  169 (365)
T 2y7j_A           90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY  169 (365)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence            34456799999999999999665    4689999999975421        1245688999999999 799999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------  137 (253)
                      ...+..++||||+.+|+|.+++....   .+.+.....+                                         
T Consensus       170 ~~~~~~~lv~e~~~g~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~  246 (365)
T 2y7j_A          170 ESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF  246 (365)
T ss_dssp             EBSSEEEEEECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             eeCCEEEEEEEeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence            99999999999999999998873211   0111100000                                         


Q ss_pred             -----------------------ee------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          138 -----------------------YA------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       138 -----------------------~~------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                                             ..      ....++.++|||||||++|||++|..||.....  ......+    . .
T Consensus       247 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~i----~-~  319 (365)
T 2y7j_A          247 SCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILMLRMI----M-E  319 (365)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-H
T ss_pred             ccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHHHHH----H-h
Confidence                                   00      122477899999999999999999999864321  1111111    0 0


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +.. ....+..     ...+..+.+++.+||+.||++|||+.++++
T Consensus       320 ~~~-~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          320 GQY-QFSSPEW-----DDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             TCC-CCCHHHH-----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCC-CCCCccc-----ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            000 0000000     112356788999999999999999999986

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.92  E-value=8.8e-26  Score=195.34  Aligned_cols=186  Identities=16%  Similarity=0.165  Sum_probs=131.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|.+.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|+.+++.++||||+++++++.+.+.+++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            5788999999999999665    46899999999754   2344578899999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCC-cCCCCccceeee--------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPAN-KGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||+.+|+|.+++..... ...+.......+                                                  
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~  344 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT  344 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence            99999999988854221 111221111111                                                  


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     .+....|+.++|||||||++|||++|..||........  ............           ..
T Consensus       345 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~~~-----------~~  411 (543)
T 3c4z_A          345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLEQA-----------VT  411 (543)
T ss_dssp             CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHHCC-----------CC
T ss_pred             ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhhcc-----------cC
Confidence                           12234588899999999999999999999975432211  011101111100           01


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCH-----HHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTM-----LEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~-----~~il~  234 (253)
                      .+...+..+.+++.+||..||++||++     ++|++
T Consensus       412 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          412 YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            112334677888999999999999965     66663

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.92  E-value=1.5e-25  Score=181.80  Aligned_cols=197  Identities=18%  Similarity=0.213  Sum_probs=127.4

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc-----cccHHHHHHHHHHHHhcc---CCCcceEeEEEEec
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-----GQGLEEFKNEMMLIAKLQ---DINLVRIIGCCVEK  101 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---H~nIv~~~~~~~~~  101 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++....     ......+.+|+.+++.++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            357899999999999999665    568899999997432     222356778888877764   99999999999876


Q ss_pred             C-----eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------
Q 043709          102 G-----VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------  137 (253)
Q Consensus       102 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------  137 (253)
                      .     ..+++|||+. |+|.+++...... .+++.....+                                       
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df  164 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP-GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF  164 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence            5     5899999998 5999887543211 1111111111                                       


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCC
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGS  190 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~  190 (253)
                                               ......++.++|||||||++|||++|..||......  .....+.....  ....
T Consensus       165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~  242 (308)
T 3g33_A          165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA--DQLGKIFDLIGLPPEDD  242 (308)
T ss_dssp             SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH--HHHHHHHHHHCCCCTTT
T ss_pred             ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChhh
Confidence                                     123455788999999999999999999998654322  11111111110  0011


Q ss_pred             ccccc---cccCCC-------CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          191 LWDLM---DPMLQT-------EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       191 ~~~~~---~~~~~~-------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +....   ......       .........+.+++.+||+.||++|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            10000   000000       001123457788999999999999999999985

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.92  E-value=2.7e-25  Score=190.26  Aligned_cols=198  Identities=17%  Similarity=0.164  Sum_probs=135.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccC-CCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQD-INLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++....  ..+.+.+|+.+++.+.| ++|..+..++...+..++|||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46899999999999999665    458999999887542  22358899999999976 667777777788889999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      |+ +++|.+++.....  .+.+.....+                                                    
T Consensus        84 ~~-g~sL~~ll~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~  160 (483)
T 3sv0_A           84 LL-GPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS  160 (483)
T ss_dssp             CC-CCBHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred             CC-CCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence            99 8999998842110  0111111110                                                    


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-chhhhhhHhhhcCCCccc
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-TLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~  193 (253)
                                             ......++.++|||||||++|||++|..||........ .....+..... ......
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~~  239 (483)
T 3sv0_A          161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-ATSIEA  239 (483)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH-HSCHHH
T ss_pred             cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc-cccHHH
Confidence                                   11223467789999999999999999999976544321 11111101110 000000


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCC
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQ  247 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~  247 (253)
                           +.    ..++..+.+++..||+.+|++||++.+|++.|+++......+.
T Consensus       240 -----l~----~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~  284 (483)
T 3sv0_A          240 -----LC----RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQF  284 (483)
T ss_dssp             -----HH----TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred             -----Hh----cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCc
Confidence                 00    1123578889999999999999999999999999976554443

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.92  E-value=7.5e-27  Score=190.84  Aligned_cols=201  Identities=14%  Similarity=0.156  Sum_probs=130.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|.+.+.||+|+||.+++    .+++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            5799999999999999665    468899999997542 22222456899999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +. |+|.+++.....  .+++.....+                                                     
T Consensus        82 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~  158 (324)
T 3mtl_A           82 LD-KDLKQYLDDCGN--IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD  158 (324)
T ss_dssp             CS-EEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             cc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence            98 588877643211  0111100000                                                     


Q ss_pred             ------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cCCCcccccc------
Q 043709          138 ------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--NDGSLWDLMD------  196 (253)
Q Consensus       138 ------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------  196 (253)
                                  .. ....++.++|||||||++|||++|..||......  .....+.....  ..........      
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEFKT  236 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGCHHHHH
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHhchhhhcchhhcc
Confidence                        01 1245788999999999999999999998754322  11111111110  0011111100      


Q ss_pred             ---ccCCC----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhccc
Q 043709          197 ---PMLQT----EASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIV  241 (253)
Q Consensus       197 ---~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~  241 (253)
                         +....    .........+.+++.+||+.||.+|||++++++  .+.+...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             TCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             cccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence               00000    001123456788999999999999999999995  5655543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.92  E-value=8.6e-26  Score=198.28  Aligned_cols=204  Identities=20%  Similarity=0.159  Sum_probs=131.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEe------cCee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE------KGVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~------~~~~  104 (253)
                      ++|++.+.||+|+||.+++    .+++.||||++... .....+.+.+|+.+++.++||||+++++++..      .+..
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            6799999999999999655    46889999999764 44556789999999999999999999998765      6678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++|||||++|+|.+++........+++.....+                                               
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~  173 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKE  173 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCB
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccc
Confidence            999999999999999865332111221111111                                               


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh----HhhhcCCCccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI----WNLWNDGSLWD  193 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~  193 (253)
                                          ......++.++|||||||++|+|++|..||........ +.....    ...........
T Consensus       174 ~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~-~~~~i~~~~~~~~~~~~~l~g  252 (676)
T 3qa8_A          174 LDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQ-WHGKVREKSNEHIVVYDDLTG  252 (676)
T ss_dssp             TTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHH-SSTTCC------CCSCCCCSS
T ss_pred             cccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhh-hhhhhhcccchhhhhhhhhcc
Confidence                                12335678899999999999999999999865321100 000000    00000000000


Q ss_pred             --cccc--cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHH-----HHHHhhcc
Q 043709          194 --LMDP--MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEI-----VSMLSNEI  240 (253)
Q Consensus       194 --~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~i-----l~~L~~~~  240 (253)
                        ....  ..........+..+.+++.+||..||++|||++++     .+.+++++
T Consensus       253 ~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          253 AVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             SCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             ccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence              0000  11122334567788999999999999999999873     34555554

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=8.1e-26  Score=187.76  Aligned_cols=206  Identities=17%  Similarity=0.134  Sum_probs=127.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG------  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~------  102 (253)
                      .++|++.+.||+|+||.++.    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46799999999999999655    56899999999653  3344567899999999999999999999997653      


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccce------------------------------------eee---------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTR------------------------------------VRI---------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------------------------------------~~i---------  137 (253)
                      ..++||||+ +++|.+++....    ++....                                    ..+         
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~~~----l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKHEK----LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA  178 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eEEEEEecC-CCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence            469999999 789988874311    110000                                    000         


Q ss_pred             -----------------eeec-CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC----------
Q 043709          138 -----------------YALH-GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG----------  189 (253)
Q Consensus       138 -----------------~~~~-~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------  189 (253)
                                       .... ..++.++||||+||++|||++|+.||......  .....+........          
T Consensus       179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~~~~~~~~~~~~~  256 (367)
T 1cm8_A          179 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL--DQLKEIMKVTGTPPAEFVQRLQSD  256 (367)
T ss_dssp             CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             ccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCCHHHHHHhhhH
Confidence                             1112 46889999999999999999999998754321  11111100000000          


Q ss_pred             -------CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcccCCCCCCC
Q 043709          190 -------SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIVNLPYPQQ  248 (253)
Q Consensus       190 -------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~~~~~~~~  248 (253)
                             .........+ ..........+.+++.+||..||.+|||++++++  .+++.......|..
T Consensus       257 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~~~~~~~~  323 (367)
T 1cm8_A          257 EAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQV  323 (367)
T ss_dssp             HHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC------CC
T ss_pred             HHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcCCccCCCC
Confidence                   0000000000 1111233467888999999999999999999996  46655543333333

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.92  E-value=1.8e-26  Score=187.61  Aligned_cols=193  Identities=20%  Similarity=0.238  Sum_probs=131.6

Q ss_pred             ccccHHHHHHHhcCccccCccccccccceEe---eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhcc--CCCcceEeE
Q 043709           24 PFFSLASISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQ--DINLVRIIG   96 (253)
Q Consensus        24 ~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~~~~   96 (253)
                      +.+.+..+....++|++.+.||+|+||.+++   .+++.||||++...  .....+.+.+|+.+++.++  ||||+++++
T Consensus        16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~   95 (313)
T 3cek_A           16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD   95 (313)
T ss_dssp             ----CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEE
T ss_pred             CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEE
Confidence            3344445555667899999999999999665   45889999999754  3445678999999999997  599999999


Q ss_pred             EEEecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------
Q 043709           97 CCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------  137 (253)
Q Consensus        97 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------  137 (253)
                      ++...+..+++|| +.+|+|.+++.....   +++.....+                                       
T Consensus        96 ~~~~~~~~~lv~e-~~~~~L~~~l~~~~~---~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg  171 (313)
T 3cek_A           96 YEITDQYIYMVME-CGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFG  171 (313)
T ss_dssp             EEECSSEEEEEEC-CCSEEHHHHHHHCSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCS
T ss_pred             EeecCCEEEEEEe-cCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeecc
Confidence            9999999999999 667899988743211   111100000                                       


Q ss_pred             ---------------------------ee-----------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhh
Q 043709          138 ---------------------------YA-----------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLG  179 (253)
Q Consensus       138 ---------------------------~~-----------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~  179 (253)
                                                 ..           ....++.++|||||||++|||++|..||.........+  
T Consensus       172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--  249 (313)
T 3cek_A          172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--  249 (313)
T ss_dssp             SSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH--
T ss_pred             ccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH--
Confidence                                       00           01357779999999999999999999986432211111  


Q ss_pred             hhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          180 YVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                         .....         +.............+.+++.+||..||.+|||+.++++
T Consensus       250 ---~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          250 ---HAIID---------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             ---HHHHC---------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---HHHHh---------cccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence               11111         11111111112356778888999999999999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.92  E-value=1.1e-25  Score=183.93  Aligned_cols=189  Identities=18%  Similarity=0.282  Sum_probs=121.6

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHH-HHHhccCCCcceEeEEEEecCeeEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMM-LIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~-~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++... .......+..|.. +++.++||||+++++++...+..++|
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv   99 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC   99 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence            347899999999999999654    46889999999764 2334455666666 67778999999999999999999999


Q ss_pred             EeeCCCCChhhhccCC--CCcCCCCccce-------------------------------------eee-----------
Q 043709          108 YEHMPNKSLDYFLFDP--ANKGRLGWGTR-------------------------------------VRI-----------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~--~~~~~~~~~~~-------------------------------------~~i-----------  137 (253)
                      |||+.+ +|.+++...  .....+.+...                                     ..+           
T Consensus       100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  178 (327)
T 3aln_A          100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD  178 (327)
T ss_dssp             ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred             EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence            999985 766554210  00000000000                                     000           


Q ss_pred             -----------------ee----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 -----------------YA----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 -----------------~~----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                       ..    ....++.++|||||||++|||++|..||.........+...      ..+.     .
T Consensus       179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~------~~~~-----~  247 (327)
T 3aln_A          179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV------VKGD-----P  247 (327)
T ss_dssp             ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCC------CCSC-----C
T ss_pred             ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHH------hcCC-----C
Confidence                             11    23457889999999999999999999986433211111000      0010     1


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      +.+...........+.+++.+||..||++|||+.++++
T Consensus       248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            11111112234467888999999999999999999874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.92  E-value=1.9e-25  Score=184.36  Aligned_cols=195  Identities=14%  Similarity=0.135  Sum_probs=125.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe--------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--------  100 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--------  100 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++...  .......+.+|+.+++.++||||+++++++..        
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            36899999999999999554    46889999999654  23345678899999999999999999999987        


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+.+++||||+.+ +|...+......  +++.....+                                           
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  172 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  172 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCTTSC--CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CceEEEEEeccCC-CHHHHHhhccCC--CCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence            4568999999985 665554221100  111100000                                           


Q ss_pred             --------------------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cC
Q 043709          138 --------------------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--ND  188 (253)
Q Consensus       138 --------------------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~  188 (253)
                                                ... ...++.++|||||||++|||++|..||......  .....+.....  ..
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~~  250 (351)
T 3mi9_A          173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLCGSITP  250 (351)
T ss_dssp             ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCT
T ss_pred             cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCh
Confidence                                      011 234788999999999999999999998754321  11111101000  00


Q ss_pred             CCcccc--------ccccCCCCC-CHH------HHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 GSLWDL--------MDPMLQTEA-SYP------ILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 ~~~~~~--------~~~~~~~~~-~~~------~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ......        ......... ...      ....+.+++.+||+.||++|||++++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            000000        000000000 001      1245778999999999999999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.92  E-value=1.5e-25  Score=185.75  Aligned_cols=208  Identities=14%  Similarity=0.087  Sum_probs=136.5

Q ss_pred             ccHHHHHHHhcCccccCccccccccceEe---eCCCEEEEEEeccccc-----------ccHHHHHHHHHHHHhccCCCc
Q 043709           26 FSLASISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSG-----------QGLEEFKNEMMLIAKLQDINL   91 (253)
Q Consensus        26 ~~~~~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~H~nI   91 (253)
                      ....++....++|++.+.||+|+||.+++   ..++.||||++.....           ...+.+.+|+.+++.++||||
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   91 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI   91 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence            45667888899999999999999999665   4588999999964311           123789999999999999999


Q ss_pred             ceEeEEEEec-----CeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------
Q 043709           92 VRIIGCCVEK-----GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------  137 (253)
Q Consensus        92 v~~~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------  137 (253)
                      +++++++...     ...++||||+. |+|.+++.....  .+++.....+                             
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRI--VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA  168 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc
Confidence            9999998543     36899999998 577777643211  1111111111                             


Q ss_pred             -----------------------------------eeec-CccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhh
Q 043709          138 -----------------------------------YALH-GVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYV  181 (253)
Q Consensus       138 -----------------------------------~~~~-~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~  181 (253)
                                                         .... ..++.++|||||||++|+|++|..||......  .....+
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i  246 (362)
T 3pg1_A          169 DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY--NQLNKI  246 (362)
T ss_dssp             TTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHH
T ss_pred             CCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence                                               1111 45788999999999999999999998754321  111111


Q ss_pred             hHhhh------------------cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          182 IWNLW------------------NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       182 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                      .....                  ........... ............+.+++.+||..||.+|||+.++++  .++.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR-AWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC-CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             HHHcCCCChHHhhhccchhhhHHHHhhcccCChh-hHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence            00000                  00000000000 000111122456888999999999999999999995  34444

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.92  E-value=2.5e-26  Score=190.95  Aligned_cols=178  Identities=16%  Similarity=0.130  Sum_probs=117.6

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHH-HHhccCCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMML-IAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..++|++.+.||+|+||++++    .+++.||||++....   ......+..|..+ ++.++||||+++++++.+.+.++
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence            346899999999999999655    468899999997642   2334556777776 56789999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccce------------------------------------eee------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTR------------------------------------VRI------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------------------------------------~~i------------  137 (253)
                      +||||+.+|+|.+++.+...   +.....                                    +.+            
T Consensus       116 lv~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~  192 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRERC---FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH  192 (373)
T ss_dssp             EEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred             EEEeCCCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence            99999999999888732110   000000                                    000            


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       .+....|+.++|+|||||++|||++|..||.....  ..+...+    ... ..      .  
T Consensus       193 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i----~~~-~~------~--  257 (373)
T 2r5t_A          193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNI----LNK-PL------Q--  257 (373)
T ss_dssp             CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH--HHHHHHH----HHS-CC------C--
T ss_pred             CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH----Hhc-cc------C--
Confidence                             12334578899999999999999999999864322  1111111    110 00      0  


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLE  231 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~  231 (253)
                        ........+.+++.+||+.||.+||++.+
T Consensus       258 --~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          258 --LKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             --CCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             --CCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence              11123356788899999999999999753

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.91  E-value=5.9e-26  Score=182.40  Aligned_cols=191  Identities=19%  Similarity=0.248  Sum_probs=124.5

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEecccc-ccc-HHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQG-LEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~-~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ..++|++.+.||+|+||.+++    .+++.||+|++.... ... .+.+..+...++.+.||||+++++++.+.+..++|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence            457899999999999999654    478899999997542 222 23344555567888999999999999999999999


Q ss_pred             EeeCCCCChhhhccCC-CCcCCCCccce-------------------------------------eee------------
Q 043709          108 YEHMPNKSLDYFLFDP-ANKGRLGWGTR-------------------------------------VRI------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~-------------------------------------~~i------------  137 (253)
                      |||+. |+|.+++... .....+++...                                     ..+            
T Consensus        85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T 3fme_A           85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD  163 (290)
T ss_dssp             EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred             Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence            99998 4776655210 00000111100                                     000            


Q ss_pred             ----------------e----eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 ----------------Y----ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 ----------------~----~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                      .    .....++.++|||||||++|||++|..||.........+....     ... ..     
T Consensus       164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~-~~-----  232 (290)
T 3fme_A          164 VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV-----EEP-SP-----  232 (290)
T ss_dssp             ------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHH-----HSC-CC-----
T ss_pred             ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHh-----ccC-CC-----
Confidence                            0    1334578899999999999999999999864332221111111     010 00     


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                         .......+..+.+++.+||+.||++|||+.++++  .++..
T Consensus       233 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          233 ---QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             ---CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ---CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence               1111123456788999999999999999999986  45443

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.91  E-value=8.7e-26  Score=183.75  Aligned_cols=197  Identities=17%  Similarity=0.106  Sum_probs=124.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEE-----------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCV-----------   99 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~-----------   99 (253)
                      .++|++.+.||+|+||.+++    .+++.||+|++........+.+.+|+.+++.++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            36799999999999999655    458899999998766667788999999999999999999999873           


Q ss_pred             ---ecCeeEEEEeeCCCCChhhhccCCCCc------------------------------CCCCc---cceeee------
Q 043709          100 ---EKGVKILIYEHMPNKSLDYFLFDPANK------------------------------GRLGW---GTRVRI------  137 (253)
Q Consensus       100 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~------------------------------~~~~~---~~~~~i------  137 (253)
                         ..+..++||||+. |+|.+++......                              ..+-.   .....+      
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~  168 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA  168 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccc
Confidence               3467899999998 6998887331100                              00000   000000      


Q ss_pred             ---------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC--
Q 043709          138 ---------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND--  188 (253)
Q Consensus       138 ---------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~--  188 (253)
                                                 ......++.++|||||||++|||++|..||......  .............  
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~  246 (320)
T 2i6l_A          169 RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLILESIPVVHE  246 (320)
T ss_dssp             BCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHSCCCCH
T ss_pred             cccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCch
Confidence                                       011245778899999999999999999998754321  1111110000000  


Q ss_pred             -------CCccccccccCC------CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 -------GSLWDLMDPMLQ------TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 -------~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                             ............      .......+..+.+++.+||+.||++|||++++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence                   000000000000      0001123467889999999999999999999985

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.91  E-value=5.3e-26  Score=189.91  Aligned_cols=197  Identities=15%  Similarity=0.151  Sum_probs=122.5

Q ss_pred             HHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----  101 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----  101 (253)
                      +....++|++.+.||+|+||.+++    .+++.||||++......    ..+|+.+++.++||||+++++++...     
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            345667899999999999999654    57899999999754222    34799999999999999999998543     


Q ss_pred             ---------------------------------CeeEEEEeeCCCCChhhhccCC-CCcCCCCccc--------------
Q 043709          102 ---------------------------------GVKILIYEHMPNKSLDYFLFDP-ANKGRLGWGT--------------  133 (253)
Q Consensus       102 ---------------------------------~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~--------------  133 (253)
                                                       ..+++||||++ |+|.+.+... .....+++..              
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                             34899999999 4766655210 0000000000              


Q ss_pred             -----------------------eeee----------------------------eee-cCccccccceeehhHHHHHHH
Q 043709          134 -----------------------RVRI----------------------------YAL-HGVFSIKSDVFSFGVLLLETL  161 (253)
Q Consensus       134 -----------------------~~~i----------------------------~~~-~~~~~~~~DiwSlG~~l~ell  161 (253)
                                             .+.+                            ... ...++.++||||+||++|||+
T Consensus       157 LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell  236 (383)
T 3eb0_A          157 IHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI  236 (383)
T ss_dssp             HHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             HHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence                                   0111                            111 234889999999999999999


Q ss_pred             hCCCCcCcCCCCCcchhhhhhHhhh--------------cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCC
Q 043709          162 SSKKNAHFYNTNSLTLLGYVIWNLW--------------NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRP  227 (253)
Q Consensus       162 ~~~~p~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP  227 (253)
                      +|..||......  .....+.....              ............+........+..+.+++.+||..||.+||
T Consensus       237 ~g~~pf~~~~~~--~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  314 (383)
T 3eb0_A          237 LGKPLFSGETSI--DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI  314 (383)
T ss_dssp             HSSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred             hCCCCCCCCChH--HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence            999998754321  11111101000              00001111111111112223445688999999999999999


Q ss_pred             CHHHHHH
Q 043709          228 TMLEIVS  234 (253)
Q Consensus       228 s~~~il~  234 (253)
                      |+.++++
T Consensus       315 t~~e~l~  321 (383)
T 3eb0_A          315 NPYEAMA  321 (383)
T ss_dssp             CHHHHHT
T ss_pred             CHHHHhc
Confidence            9999983

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.91  E-value=4.2e-25  Score=178.70  Aligned_cols=187  Identities=20%  Similarity=0.187  Sum_probs=125.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc----cccHHHHHHHHHHHHhccCCCcceEeEEEE--ecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS----GQGLEEFKNEMMLIAKLQDINLVRIIGCCV--EKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~--~~~~~  104 (253)
                      .++|.+.+.||+|+||.++.    .+++.||+|++....    ....+.+.+|+.+++.++||||+++++++.  +.+..
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            46899999999999999654    467899999997542    345678999999999999999999999984  44678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++||||+.+| |.+++..... ..+++.....+                                               
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTT-CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEehhccCC-HHHHHHhCcc-cccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            9999999976 5555432110 11111111000                                               


Q ss_pred             --------------------ee--ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 --------------------YA--LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 --------------------~~--~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                          ..  ....++.++||||||+++|||++|..||.....  ......+    . ....    
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i----~-~~~~----  230 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFENI----G-KGSY----  230 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH----H-HCCC----
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHH----h-cCCC----
Confidence                                00  011236689999999999999999999864321  1111111    0 0100    


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                        ..    .......+.+++.+||+.||.+|||++++++  .+++..
T Consensus       231 --~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          231 --AI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             --CC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             --CC----CCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence              01    1123356778889999999999999999995  455443

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.91  E-value=1.9e-25  Score=185.52  Aligned_cols=210  Identities=14%  Similarity=0.139  Sum_probs=128.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec------C
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK------G  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~------~  102 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...      +
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            36899999999999999655    46889999999754  334456789999999999999999999999754      5


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------  137 (253)
                      ..++++||+ +++|.+++....    ++......+                                             
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~~~----l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~  182 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  182 (367)
T ss_dssp             CCEEEEECC-CEECC-----CC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred             eEEEEeccc-CCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence            689999999 589988774311    111110000                                             


Q ss_pred             -----------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC-Cc-c-----
Q 043709          138 -----------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG-SL-W-----  192 (253)
Q Consensus       138 -----------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~-~-----  192 (253)
                                       ... ...++.++||||+||++|||++|+.||......  .....+........ .. .     
T Consensus       183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          183 ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             cccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHHhhhH
Confidence                             111 246888999999999999999999998654321  11111101000000 00 0     


Q ss_pred             ---cccccc-CCCCCC-----HHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcccCCCCCCCCCC
Q 043709          193 ---DLMDPM-LQTEAS-----YPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIVNLPYPQQSAF  251 (253)
Q Consensus       193 ---~~~~~~-~~~~~~-----~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~~~~~~~~~~~  251 (253)
                         ...... ......     ......+.+|+.+||..||++|||+.++++  .+++.......|..++|
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~~~~~~  330 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY  330 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCGGGCCCCCCC
T ss_pred             HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccCCCCCCCCCCC
Confidence               000000 000000     122356888999999999999999999995  45554433333443333

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.91  E-value=3.1e-25  Score=189.48  Aligned_cols=197  Identities=15%  Similarity=0.118  Sum_probs=127.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec------C
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK------G  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~------~  102 (253)
                      .++|++++.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...      .
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            46799999999999999654    46889999999754  344567789999999999999999999999754      3


Q ss_pred             eeEEEEeeCCCCChhhhccCCC-----------------------------CcCCC--Cccceeee--------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPA-----------------------------NKGRL--GWGTRVRI--------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~-----------------------------~~~~~--~~~~~~~i--------------  137 (253)
                      .+++||||+.++ |.+.+....                             +...+  .-...+.+              
T Consensus       141 ~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  219 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  219 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCC
T ss_pred             eEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcc
Confidence            579999999864 544431100                             00000  00000000              


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh------------------
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL------------------  185 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~------------------  185 (253)
                                    .+....|+.++||||+||++|||++|+.||.......  ....+....                  
T Consensus       220 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~--~~~~i~~~lg~p~~~~~~~~~~~~~~~  297 (464)
T 3ttj_A          220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID--QWNKVIEQLGTPCPEFMKKLQPTVRNY  297 (464)
T ss_dssp             C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHTTSCHHHHHH
T ss_pred             cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhcCCCCHHHHHHcchhhhhH
Confidence                          2234468899999999999999999999987543211  111110000                  


Q ss_pred             hcC------CCccccccccCCC---CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          186 WND------GSLWDLMDPMLQT---EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       186 ~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...      .............   .........+.+|+.+||..||++|||++++++
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            000      0000001010000   011122567889999999999999999999985

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.91  E-value=1.6e-26  Score=192.67  Aligned_cols=183  Identities=11%  Similarity=0.097  Sum_probs=122.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHH---HHHhccCCCcceEe-------EE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMM---LIAKLQDINLVRII-------GC   97 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~H~nIv~~~-------~~   97 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++...   .....+.+.+|+.   +++.++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            35688899999999999665    45899999999743   3445678999994   55556899999998       66


Q ss_pred             EEecC-----------------eeEEEEeeCCCCChhhhccCCCCcCC----CCccceeee-------------------
Q 043709           98 CVEKG-----------------VKILIYEHMPNKSLDYFLFDPANKGR----LGWGTRVRI-------------------  137 (253)
Q Consensus        98 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~~~----~~~~~~~~i-------------------  137 (253)
                      +.+.+                 ..+++|||+ +|+|.+++........    +++.....+                   
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            66543                 389999999 5899998853110000    001111111                   


Q ss_pred             ------------------------------------------eeecC-----------ccccccceeehhHHHHHHHhCC
Q 043709          138 ------------------------------------------YALHG-----------VFSIKSDVFSFGVLLLETLSSK  164 (253)
Q Consensus       138 ------------------------------------------~~~~~-----------~~~~~~DiwSlG~~l~ell~~~  164 (253)
                                                                .....           .++.++|||||||++|||++|.
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~  310 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD  310 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence                                                      01112           6889999999999999999999


Q ss_pred             CCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          165 KNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       165 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                      .||........  ..             .... .     ....+..+.+++.+||+.||++|||+.++++  .++++
T Consensus       311 ~Pf~~~~~~~~--~~-------------~~~~-~-----~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          311 LPITKDAALGG--SE-------------WIFR-S-----CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             CCC------CC--SG-------------GGGS-S-----CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             CCCcccccccc--hh-------------hhhh-h-----ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            99864332111  00             0000 0     0122356888999999999999999999984  44443

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.91  E-value=5.7e-25  Score=182.94  Aligned_cols=202  Identities=16%  Similarity=0.130  Sum_probs=130.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG------  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~------  102 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            36899999999999999655    46889999999753  3344567899999999999999999999997654      


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCc-----------------------------C-----------CCCccceeee-----
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANK-----------------------------G-----------RLGWGTRVRI-----  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~-----------------------------~-----------~~~~~~~~~i-----  137 (253)
                      ..++||||+.+ +|.+++......                             .           ..++......     
T Consensus       104 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  182 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM  182 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC---------
T ss_pred             ceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccc
Confidence            78999999985 676665211000                             0           0000000000     


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh------------------
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL------------------  185 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~------------------  185 (253)
                                    ......++.++|||||||++|||++|..||.......  ....+....                  
T Consensus       183 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~  260 (371)
T 2xrw_A          183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID--QWNKVIEQLGTPCPEFMKKLQPTVRTY  260 (371)
T ss_dssp             -------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHC-CCCCCHHHHTTSCHHHHHH
T ss_pred             cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHHHhhhHHHHH
Confidence                          1233457889999999999999999999987543211  110000000                  


Q ss_pred             h-cCC-----CccccccccCCC---CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          186 W-NDG-----SLWDLMDPMLQT---EASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       186 ~-~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                      . ...     ............   .........+.+++.+||..||++|||++++++  .++..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            0 000     000000000000   011223567889999999999999999999995  45543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.91  E-value=4.2e-25  Score=187.05  Aligned_cols=184  Identities=14%  Similarity=0.113  Sum_probs=123.2

Q ss_pred             HHhcCccccCccccccccceE---eeCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEE
Q 043709           33 AATDNFSMENKLGEGGFGPGK---LLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~---~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ....+|.+.+.||+|+||+++   ..+++.||||++......   .+.+|+.+++.+ +||||+++++++.+.+..++||
T Consensus        21 i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~   97 (432)
T 3p23_A           21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI   97 (432)
T ss_dssp             ETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             EccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence            344579999999999999832   357899999999754322   356899999999 7999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCC--------------------------------CCc-----c--ceeee------------
Q 043709          109 EHMPNKSLDYFLFDPANKGR--------------------------------LGW-----G--TRVRI------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~--------------------------------~~~-----~--~~~~i------------  137 (253)
                      |||. |+|.+++........                                +-.     .  ....+            
T Consensus        98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~  176 (432)
T 3p23_A           98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG  176 (432)
T ss_dssp             ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred             ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence            9997 599888743221100                                000     0  00001            


Q ss_pred             --------------------eee---cCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccc
Q 043709          138 --------------------YAL---HGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWD  193 (253)
Q Consensus       138 --------------------~~~---~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (253)
                                          .+.   ...++.++|||||||++|||++ |..||........        ..........
T Consensus       177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~--------~~~~~~~~~~  248 (432)
T 3p23_A          177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--------NILLGACSLD  248 (432)
T ss_dssp             ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH--------HHHTTCCCCT
T ss_pred             CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH--------HHHhccCCcc
Confidence                                011   2345668999999999999999 7777643221110        0000110000


Q ss_pred             cccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .      ..........+.+++.+||+.||.+|||++++++
T Consensus       249 ~------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          249 C------LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             T------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             c------cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            0      1112234556788999999999999999999983

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=1.5e-25  Score=185.39  Aligned_cols=184  Identities=16%  Similarity=0.131  Sum_probs=128.2

Q ss_pred             cCccccCccccccccceEe-------eCCCEEEEEEeccc----ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCe
Q 043709           36 DNFSMENKLGEGGFGPGKL-------LNGEQVAVKRLSSQ----SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGV  103 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~-------~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~  103 (253)
                      ++|++.+.||+|+||.+++       .+++.||||+++..    .....+.+.+|+.+++.+ .||||+++++++...+.
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            6899999999999999664       36899999999753    223446678899999999 69999999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee----------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI----------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i----------  137 (253)
                      .++||||+.+|+|.+++.....   +......                                    .+          
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRER---FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             EEEEeecCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence            9999999999999988732110   1110000                                    00          


Q ss_pred             --------------------eee--cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 --------------------YAL--HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 --------------------~~~--~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                          ...  ...++.++|||||||++|||++|..||......... .... ......       
T Consensus       211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~~~~-~~~~~~-------  281 (355)
T 1vzo_A          211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ-AEIS-RRILKS-------  281 (355)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH-HHHH-HHHHHC-------
T ss_pred             cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchH-HHHH-HHHhcc-------
Confidence                                011  123678899999999999999999998754332211 1111 111100       


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCC-----CHHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRP-----TMLEIVSM  235 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-----s~~~il~~  235 (253)
                      .    ...+......+.+++.+||..||.+||     +++++++.
T Consensus       282 ~----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          282 E----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             C----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             C----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            0    111123345677889999999999999     99999853

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.91  E-value=1.9e-24  Score=183.23  Aligned_cols=182  Identities=18%  Similarity=0.172  Sum_probs=124.8

Q ss_pred             CccccCccccccccceE---eeCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           37 NFSMENKLGEGGFGPGK---LLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~---~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      .|...+.||+|+||+++   ..+++.||||++...   ..+.+.+|+.+++.+ +||||+++++++.+.+.+++|||||.
T Consensus        16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            35556789999999954   357899999999753   345678999999987 89999999999999999999999996


Q ss_pred             CCChhhhccCCCCcCC-CCc---cc-------------------------------------------------eeee--
Q 043709          113 NKSLDYFLFDPANKGR-LGW---GT-------------------------------------------------RVRI--  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~-~~~---~~-------------------------------------------------~~~i--  137 (253)
                       |+|.+++........ ..+   ..                                                 ...+  
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D  171 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD  171 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence             699888854221100 000   00                                                 0001  


Q ss_pred             -------------------------------ee-------ecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchh
Q 043709          138 -------------------------------YA-------LHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLL  178 (253)
Q Consensus       138 -------------------------------~~-------~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~  178 (253)
                                                     ..       ....++.++|||||||++|||++ |..||.........+.
T Consensus       172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~  251 (434)
T 2rio_A          172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII  251 (434)
T ss_dssp             CTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHH
T ss_pred             cccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHHHh
Confidence                                           00       01457788999999999999999 8888754322111110


Q ss_pred             hhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          179 GYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                          ...   ...     +..........+..+.+++.+||+.||.+|||+.++++
T Consensus       252 ----~~~---~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          252 ----RGI---FSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             ----HTC---CCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----cCC---CCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence                100   000     11112223456778999999999999999999999985

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.91  E-value=1.5e-25  Score=186.42  Aligned_cols=220  Identities=14%  Similarity=0.113  Sum_probs=134.1

Q ss_pred             CCCceeecccCCCCCCcccccHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHH
Q 043709            7 NMGITTEARGKSKESCIPFFSLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEM   80 (253)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~   80 (253)
                      +++.+.++.....++-.+.-.....-...++|.+.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+
T Consensus        13 ~~~~~~~m~~~~~~g~~~~~~~~~~~~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~   92 (371)
T 4exu_A           13 GLVPRGSMSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYREL   92 (371)
T ss_dssp             --------CCSSCTTEEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHH
T ss_pred             CccccCceeeeccccceeeeeccceecccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHH
Confidence            344455554444433222221111112346899999999999999665    46889999999754  333457789999


Q ss_pred             HHHHhccCCCcceEeEEEEecCee------EEEEeeCCCCChhhhccCCCCcCCCCccce--------------------
Q 043709           81 MLIAKLQDINLVRIIGCCVEKGVK------ILIYEHMPNKSLDYFLFDPANKGRLGWGTR--------------------  134 (253)
Q Consensus        81 ~~l~~l~H~nIv~~~~~~~~~~~~------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~--------------------  134 (253)
                      .+++.++||||+++++++...+..      ++||||+. |+|.+++...     +++...                    
T Consensus        93 ~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~~iv  166 (371)
T 4exu_A           93 LLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMGME-----FSEEKIQYLVYQMLKGLKYIHSAGVV  166 (371)
T ss_dssp             HHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHhhcC-----CCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence            999999999999999999877654      99999998 5887766211     000000                    


Q ss_pred             ----------------eee--------------------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCC
Q 043709          135 ----------------VRI--------------------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYN  171 (253)
Q Consensus       135 ----------------~~i--------------------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~  171 (253)
                                      +.+                          ... ...++.++|||||||++|+|++|..||....
T Consensus       167 H~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  246 (371)
T 4exu_A          167 HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  246 (371)
T ss_dssp             CSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             CCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence                            000                          112 2568889999999999999999999986543


Q ss_pred             CCCcchhhhhhHhhhcCC-Cccc------------cccccCCC---CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          172 TNSLTLLGYVIWNLWNDG-SLWD------------LMDPMLQT---EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~-~~~~------------~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..  .............. ....            ........   .........+.+++.+||+.||++|||++++++
T Consensus       247 ~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          247 YL--DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             HH--HHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hH--HHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            21  11111100000000 0000            00000000   001123467888999999999999999999985

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.91  E-value=2.5e-25  Score=185.09  Aligned_cols=188  Identities=12%  Similarity=0.034  Sum_probs=116.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhc--cCCCcceEe-------EEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKL--QDINLVRII-------GCCV   99 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~H~nIv~~~-------~~~~   99 (253)
                      .+|++.+.||+|+||.+++    .+++.||||++....   ....+.+.+|+.+++.+  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            4589999999999999655    468899999998643   23455677886655555  599988855       4544


Q ss_pred             ec-----------------CeeEEEEeeCCCCChhhhccCCCCcCCCCccce------ee----e---------------
Q 043709          100 EK-----------------GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTR------VR----I---------------  137 (253)
Q Consensus       100 ~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------~~----i---------------  137 (253)
                      ..                 +..++||||++ |+|.+++.....  ...+..+      ..    +               
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHr  218 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHG  218 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccC
Confidence            33                 33899999999 899999854211  1122211      11    1               


Q ss_pred             -------------------------------------------eeec--CccccccceeehhHHHHHHHhCCCCcCcCCC
Q 043709          138 -------------------------------------------YALH--GVFSIKSDVFSFGVLLLETLSSKKNAHFYNT  172 (253)
Q Consensus       138 -------------------------------------------~~~~--~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~  172 (253)
                                                                 ....  ..++.++|||||||++|||++|..||.....
T Consensus       219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~  298 (371)
T 3q60_A          219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTP  298 (371)
T ss_dssp             TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCT
T ss_pred             cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCc
Confidence                                                       1112  4578999999999999999999999876543


Q ss_pred             CCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          173 NSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ........        ...................+..+.+++.+||+.||++|||+.++++
T Consensus       299 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          299 GIKGSWKR--------PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             TCTTCCCB--------CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ccccchhh--------hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            32111000        0000011111111111234567888999999999999999999973

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.91  E-value=4.5e-25  Score=178.11  Aligned_cols=182  Identities=19%  Similarity=0.258  Sum_probs=124.5

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe----------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE----------  100 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~----------  100 (253)
                      .++|++.+.||+|+||.++.    .+++.||||++.. .....+.+.+|+.+++.++||||+++++++..          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   83 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA   83 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred             cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence            46799999999999999555    4689999999964 33455789999999999999999999998865          


Q ss_pred             ---cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------
Q 043709          101 ---KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------  137 (253)
Q Consensus       101 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------  137 (253)
                         .+..+++|||+++|+|.+++......  ........+                                        
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg  161 (303)
T 1zy4_A           84 VKKKSTLFIQMEYCENGTLYDLIHSENLN--QQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFG  161 (303)
T ss_dssp             --CEEEEEEEEECCCSCBHHHHHHHSCGG--GCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             cccCCceEEEEecCCCCCHHHhhhccccc--cchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence               35689999999999999988422110  000000000                                        


Q ss_pred             ---------------------------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcch
Q 043709          138 ---------------------------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL  177 (253)
Q Consensus       138 ---------------------------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~  177 (253)
                                                             .. ..+.++.++|||||||++|||++   ||..... ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~-~~~~  237 (303)
T 1zy4_A          162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME-RVNI  237 (303)
T ss_dssp             CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH-HHHH
T ss_pred             chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh-HHHH
Confidence                                                   00 12357889999999999999998   4432111 0111


Q ss_pred             hhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          178 LGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..    ... ..      ............+..+.+++.+||+.||.+|||+.++++
T Consensus       238 ~~----~~~-~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          238 LK----KLR-SV------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HH----HHH-ST------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HH----hcc-cc------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            11    111 10      011112222334456788899999999999999999986

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.91  E-value=2.2e-25  Score=186.51  Aligned_cols=86  Identities=22%  Similarity=0.383  Sum_probs=64.8

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecC--ee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKG--VK  104 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~--~~  104 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.+. ||||+++++++...+  .+
T Consensus         7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~   86 (388)
T 3oz6_A            7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV   86 (388)
T ss_dssp             HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred             ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence            457899999999999999654    56899999999653  3445567889999999997 999999999997554  68


Q ss_pred             EEEEeeCCCCChhhhc
Q 043709          105 ILIYEHMPNKSLDYFL  120 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l  120 (253)
                      ++||||+. |+|..++
T Consensus        87 ~lv~e~~~-~~L~~~~  101 (388)
T 3oz6_A           87 YLVFDYME-TDLHAVI  101 (388)
T ss_dssp             EEEEECCS-EEHHHHH
T ss_pred             EEEecccC-cCHHHHH
Confidence            99999998 5887776

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.91  E-value=4.8e-25  Score=188.24  Aligned_cols=85  Identities=15%  Similarity=0.303  Sum_probs=62.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----Cee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----GVK  104 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~~~  104 (253)
                      ++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+|+.++||||+++++++...     +.+
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            5799999999999999654    47899999999754  334457899999999999999999999999543     569


Q ss_pred             EEEEeeCCCCChhhhcc
Q 043709          105 ILIYEHMPNKSLDYFLF  121 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~  121 (253)
                      ++||||+. |+|..++.
T Consensus       133 ~lv~e~~~-~~L~~~~~  148 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLFR  148 (458)
T ss_dssp             EEEECCCS-EEHHHHHH
T ss_pred             EEEEeccc-cchhhhcc
Confidence            99999985 68877763

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.91  E-value=6.5e-25  Score=186.08  Aligned_cols=87  Identities=16%  Similarity=0.307  Sum_probs=73.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----Ce
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----GV  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~~  103 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+|+.++||||+++++++...     +.
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            46899999999999999555    46889999999754  334457899999999999999999999999766     57


Q ss_pred             eEEEEeeCCCCChhhhccC
Q 043709          104 KILIYEHMPNKSLDYFLFD  122 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~  122 (253)
                      +++||||+. |+|.+++..
T Consensus       105 ~~lv~e~~~-~~L~~~~~~  122 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKT  122 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHS
T ss_pred             EEEEEecCC-cCHHHHHhc
Confidence            999999987 599888743

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.90  E-value=1.5e-24  Score=178.13  Aligned_cols=192  Identities=14%  Similarity=0.141  Sum_probs=120.4

Q ss_pred             HhcCccccC-ccccccccceEe----eCCCEEEEEEecccccccHHHHHHHH-HHHHhccCCCcceEeEEEEe----cCe
Q 043709           34 ATDNFSMEN-KLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEM-MLIAKLQDINLVRIIGCCVE----KGV  103 (253)
Q Consensus        34 ~~~~~~~~~-~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~H~nIv~~~~~~~~----~~~  103 (253)
                      ..++|.+.+ .||+|+||.+++    .+++.||||++...     ....+|+ ..++.+.||||+++++++..    ...
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            346799865 699999999665    46899999999653     1223333 34556789999999999976    455


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceee---------------------------------------e-------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVR---------------------------------------I-------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~---------------------------------------i-------  137 (253)
                      +++||||+.+|+|.+++...... .+++.....                                       +       
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~-~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~  179 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQ-AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK  179 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CC-CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence            89999999999999998543210 111111110                                       0       


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          ......++.++|||||||++|+|++|..||.........  ... ....      .....
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~-~~~~------~~~~~  250 (336)
T 3fhr_A          180 ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS--PGM-KRRI------RLGQY  250 (336)
T ss_dssp             EC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------------
T ss_pred             eccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh--hhH-HHhh------hcccc
Confidence                                122345778899999999999999999998654332110  000 0000      00000


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ..........+..+.+++.+||+.||.+|||++++++  .+++..
T Consensus       251 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          251 GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            1111111234467888999999999999999999996  566554

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.90  E-value=4.3e-25  Score=182.28  Aligned_cols=203  Identities=17%  Similarity=0.141  Sum_probs=130.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----Cee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----GVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~~~  104 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++... .......+.+|+.+++.++||||+++++++...     +..
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            46899999999999999655    46889999999754 334456788999999999999999999998764     678


Q ss_pred             EEEEeeCCCCChhhhccCCCCc-----------------------------------------CCCCccceeee------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANK-----------------------------------------GRLGWGTRVRI------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~-----------------------------------------~~~~~~~~~~i------  137 (253)
                      +++|||+. |+|.+++......                                         ...++.....+      
T Consensus        90 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  168 (353)
T 2b9h_A           90 YIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD  168 (353)
T ss_dssp             EEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred             EEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccc
Confidence            99999998 5888776321100                                         00000000000      


Q ss_pred             ------------------------e-eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC--CC
Q 043709          138 ------------------------Y-ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND--GS  190 (253)
Q Consensus       138 ------------------------~-~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~  190 (253)
                                              . .....++.++|||||||++|||++|..||.......  ............  ..
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~  246 (353)
T 2b9h_A          169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH--QLLLIFGIIGTPHSDN  246 (353)
T ss_dssp             -----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCCCCSTT
T ss_pred             ccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCchhc
Confidence                                    0 112457889999999999999999999987543211  111000000000  00


Q ss_pred             cccccc-----------ccCC----CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          191 LWDLMD-----------PMLQ----TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       191 ~~~~~~-----------~~~~----~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ......           +...    .......+..+.+++.+||..||++|||++++++  .++...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          247 DLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             TTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             cccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            000000           0000    0001123457788999999999999999999996  455544

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.90  E-value=4.5e-25  Score=196.18  Aligned_cols=181  Identities=19%  Similarity=0.162  Sum_probs=131.6

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~  105 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++...   .....+.+..|..++..+ +||||+++++++.+.+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            346899999999999999664    56889999999753   345567889999999988 7999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceee------------------------------------e------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVR------------------------------------I------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~------------------------------------i------------  137 (253)
                      +||||+.+|+|..++.....   +.+.....                                    +            
T Consensus       419 lV~E~~~gg~L~~~l~~~~~---~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  495 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVGR---FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  495 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred             EEEeCcCCCcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence            99999999999988732110   11100000                                    0            


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       .+....|+.++|||||||++|||++|..||.....  ..+...+    .. ..          
T Consensus       496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~~i----~~-~~----------  558 (674)
T 3pfq_A          496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSI----ME-HN----------  558 (674)
T ss_dssp             TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HS-SC----------
T ss_pred             CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHHHH----Hh-CC----------
Confidence                             23345688999999999999999999999875332  1222111    11 10          


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCH-----HHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTM-----LEIVS  234 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~-----~~il~  234 (253)
                      ...+......+.+|+.+||..||++||++     ++|++
T Consensus       559 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          559 VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            01112344678889999999999999997     67663

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.90  E-value=1.1e-25  Score=186.78  Aligned_cols=198  Identities=16%  Similarity=0.101  Sum_probs=130.3

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----Ce
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----GV  103 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~~  103 (253)
                      ..++|++.+.||+|+||.+++    .+++.||||++... .....+.+.+|+.+++.++||||+++++++...     ..
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            346899999999999999655    46889999999754 334457799999999999999999999999765     36


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCcccee------------------------------------ee----------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRV------------------------------------RI----------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~------------------------------------~i----------  137 (253)
                      .+++|||+. |+|.+++....    +++....                                    .+          
T Consensus       105 ~~iv~e~~~-~~L~~~l~~~~----~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  179 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD  179 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEcccC-cCHHHHHHhCC----CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence            899999998 58887763211    0100000                                    00          


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcc--
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLW--  192 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--  192 (253)
                                             ......++.++|||||||++|||++|..||.......  ....+.... ......  
T Consensus       180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~~~~-~~~~~~~~  256 (364)
T 3qyz_A          180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--QLNHILGIL-GSPSQEDL  256 (364)
T ss_dssp             GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG--HHHHHHHHH-CSCCHHHH
T ss_pred             CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH--HHHHHHHHh-CCCCHHHH
Confidence                                   0122347889999999999999999999986543221  111110000 000000  


Q ss_pred             -------------ccccccC--CCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhc
Q 043709          193 -------------DLMDPML--QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNE  239 (253)
Q Consensus       193 -------------~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~  239 (253)
                                   .......  ...........+.+++.+||+.||++|||++++++  .+++.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence                         0000000  00001123456888999999999999999999995  45544

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.90  E-value=9e-25  Score=178.40  Aligned_cols=197  Identities=19%  Similarity=0.216  Sum_probs=127.1

Q ss_pred             HhcCccccCccccccccceEe-----eCCCEEEEEEecccc--cccHHHHHHHHHHHHhc---cCCCcceEeEEEE----
Q 043709           34 ATDNFSMENKLGEGGFGPGKL-----LNGEQVAVKRLSSQS--GQGLEEFKNEMMLIAKL---QDINLVRIIGCCV----   99 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~-----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~~~~~~~----   99 (253)
                      ..++|++.+.||+|+||.+++     .+++.||+|++....  ......+.+|+.+++.+   .||||+++++++.    
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            457899999999999999655     346789999997532  22234577888887776   7999999999987    


Q ss_pred             -ecCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------
Q 043709          100 -EKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------  137 (253)
Q Consensus       100 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------  137 (253)
                       .....+++|||+. |+|.+++...... .+++.....+                                         
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~  166 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEP-GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL  166 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcc
Confidence             4567999999998 6998887432111 1111111100                                         


Q ss_pred             -----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC--CCcc
Q 043709          138 -----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND--GSLW  192 (253)
Q Consensus       138 -----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~  192 (253)
                                             ......++.++|||||||++|||++|..||......  .....+.......  ..+.
T Consensus       167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~  244 (326)
T 1blx_A          167 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQLGKILDVIGLPGEEDWP  244 (326)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCGGGSC
T ss_pred             cccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHcCCCCcccCc
Confidence                                   122345788999999999999999999998754321  1111111111000  0000


Q ss_pred             ------cc-cc---ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          193 ------DL-MD---PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       193 ------~~-~~---~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                            .. ..   ...........+..+.+++.+||..||++|||+.++++
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                  00 00   00001111234467788999999999999999999994

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.90  E-value=1.6e-24  Score=179.28  Aligned_cols=209  Identities=17%  Similarity=0.157  Sum_probs=121.1

Q ss_pred             HHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe-
Q 043709           29 ASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV-  103 (253)
Q Consensus        29 ~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~-  103 (253)
                      .......++|++.+.||+|+||.+++    .+++.||||++... ......+.+++..++.++||||+++++++...+. 
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~   94 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER   94 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence            34556668999999999999999554    46889999998653 2334567788888999999999999999976443 


Q ss_pred             ------eEEEEeeCCCCChhhhc-----------------------------c--CCC------CcCCCCc---cceeee
Q 043709          104 ------KILIYEHMPNKSLDYFL-----------------------------F--DPA------NKGRLGW---GTRVRI  137 (253)
Q Consensus       104 ------~~lv~e~~~~g~L~~~l-----------------------------~--~~~------~~~~~~~---~~~~~i  137 (253)
                            +++||||+.++ |...+                             +  ...      +...+-.   .....+
T Consensus        95 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl  173 (360)
T 3e3p_A           95 DRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKL  173 (360)
T ss_dssp             CTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred             cccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence                  89999999964 33221                             1  100      0000000   000111


Q ss_pred             ----------------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh---
Q 043709          138 ----------------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL---  185 (253)
Q Consensus       138 ----------------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~---  185 (253)
                                                  .. ....++.++|||||||++|||++|..||......  .....+....   
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~~~~~~~~~  251 (360)
T 3e3p_A          174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA--GQLHEIVRVLGCP  251 (360)
T ss_dssp             CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHHHCCC
T ss_pred             eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH--HHHHHHHHHcCCC
Confidence                                        11 1234788999999999999999999998754322  1111110100   


Q ss_pred             -------hcC-CCcccccc------ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhccc
Q 043709          186 -------WND-GSLWDLMD------PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIV  241 (253)
Q Consensus       186 -------~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~  241 (253)
                             ... ........      ...........+..+.+++.+||+.||.+|||+.++++  .+++...
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence                   000 00000000      00001112224567889999999999999999999995  4666553

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.90  E-value=1.4e-25  Score=182.27  Aligned_cols=186  Identities=17%  Similarity=0.283  Sum_probs=118.9

Q ss_pred             HHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccccc------ccHHHHHHHHHHHHhc----cCCCcceEe
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG------QGLEEFKNEMMLIAKL----QDINLVRII   95 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~H~nIv~~~   95 (253)
                      +.....++|++.+.||+|+||.+++    .+++.||||++.....      .....+.+|+.+++.+    +||||++++
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~  104 (312)
T 2iwi_A           25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL  104 (312)
T ss_dssp             --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred             chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence            4455667899999999999999665    4688999999975422      1223466799999998    899999999


Q ss_pred             EEEEecCeeEEEEee-CCCCChhhhccCCCCcCCCCcccee-------------------------------------ee
Q 043709           96 GCCVEKGVKILIYEH-MPNKSLDYFLFDPANKGRLGWGTRV-------------------------------------RI  137 (253)
Q Consensus        96 ~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~~-------------------------------------~i  137 (253)
                      +++...+..+++||| +.+++|.+++....   .+.+....                                     .+
T Consensus       105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl  181 (312)
T 2iwi_A          105 DWFETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKL  181 (312)
T ss_dssp             EEC-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEE
T ss_pred             EEEecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEE
Confidence            999998999999999 78999999874311   01111100                                     00


Q ss_pred             ---------------------------eeecCcc-ccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC
Q 043709          138 ---------------------------YALHGVF-SIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG  189 (253)
Q Consensus       138 ---------------------------~~~~~~~-~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~  189 (253)
                                                 ......+ +.++|||||||++|||++|..||.....        . ..  .. 
T Consensus       182 ~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~-~~--~~-  249 (312)
T 2iwi_A          182 IDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--------I-LE--AE-  249 (312)
T ss_dssp             CCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------H-HH--TC-
T ss_pred             EEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--------H-hh--hc-
Confidence                                       0111222 4589999999999999999999853210        0 00  00 


Q ss_pred             CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhccc
Q 043709          190 SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIV  241 (253)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~  241 (253)
                                 ..........+.+++.+||+.||++|||++++++  .++....
T Consensus       250 -----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          250 -----------LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             -----------CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             -----------cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence                       0011123456788999999999999999999997  3444433

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.90  E-value=5e-24  Score=180.43  Aligned_cols=134  Identities=14%  Similarity=0.218  Sum_probs=100.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc------cCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL------QDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~~~~~~~~~~~~  104 (253)
                      ..+|++.+.||+|+||.+++    .+++.||||++... ....+.+.+|+.+++.+      .|+||+++++++...+.+
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            45799999999999999665    46889999999753 33346678888888877      577999999999999999


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCcccee--------------------------------------ee---------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRV--------------------------------------RI---------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~--------------------------------------~i---------  137 (253)
                      +++|||+. |+|.+++...... .+++....                                      .+         
T Consensus       175 ~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          175 CMTFELLS-MNLYELIKKNKFQ-GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EEEECCCC-CBHHHHHHHTTTC-CCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEEEeccC-CCHHHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence            99999997 6888877432211 01111111                                      01         


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYN  171 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~  171 (253)
                                       .+....|+.++|||||||++|||++|..||....
T Consensus       253 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          253 HQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             TCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence                             1233458899999999999999999999986543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.90  E-value=2.2e-24  Score=178.22  Aligned_cols=191  Identities=17%  Similarity=0.155  Sum_probs=127.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe-----
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV-----  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~-----  103 (253)
                      .++|.+.+.||+|+||.+++    .+++.||||++...  .....+.+.+|+.+++.++||||+++++++...+.     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            35799999999999999655    46889999999754  33345678999999999999999999999987654     


Q ss_pred             -eEEEEeeCCCCChhhhccCCCCcCCCCccce------------------------------------eee---------
Q 043709          104 -KILIYEHMPNKSLDYFLFDPANKGRLGWGTR------------------------------------VRI---------  137 (253)
Q Consensus       104 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~------------------------------------~~i---------  137 (253)
                       .+++|||+. |+|.+++...     ++....                                    ..+         
T Consensus       103 ~~~lv~e~~~-~~l~~~~~~~-----~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMGLK-----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA  176 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTTSC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred             eEEEEecccc-CCHHHHhcCC-----CCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence             499999998 5888776221     000000                                    000         


Q ss_pred             -----------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC-----------
Q 043709          138 -----------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND-----------  188 (253)
Q Consensus       138 -----------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  188 (253)
                                       ... ...++.++|||||||++|||++|..||......  .....+.......           
T Consensus       177 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~  254 (353)
T 3coi_A          177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL--DQLTQILKVTGVPGTEFVQKLNDK  254 (353)
T ss_dssp             -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH--HHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred             CCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHHHhhH
Confidence                             111 246788999999999999999999998754321  1111110000000           


Q ss_pred             ------CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 ------GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                            ..........+ ..........+.+++.+||..||++|||++++++
T Consensus       255 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          255 AAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                  00000000011 1111234567888999999999999999999985

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.89  E-value=6.1e-25  Score=178.75  Aligned_cols=187  Identities=14%  Similarity=0.214  Sum_probs=114.1

Q ss_pred             HHHhcCccccCccccccccceEe----eCCCEEEEEEecccc-cccH-HHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           32 SAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGL-EEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        32 ~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~-~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ....++|++.+.||+|+||.+++    .+++.||||++.... .... +.+..+..+++.++||||+++++++...+..+
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            34457899999999999999655    468999999997542 2222 33444555677889999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccc-------------------------------------eeee-----------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGT-------------------------------------RVRI-----------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~-------------------------------------~~~i-----------  137 (253)
                      +||||+ ++.+..+......  .++...                                     ...+           
T Consensus       101 lv~e~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRMQG--PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             EEECCC-SEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             EEEecc-CCcHHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            999999 4444443311000  000000                                     0000           


Q ss_pred             -----------------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 -----------------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 -----------------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                       ..     ....++.++|||||||++|||++|..||........ .....    .... .    
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~----~~~~-~----  247 (318)
T 2dyl_A          178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE-VLTKV----LQEE-P----  247 (318)
T ss_dssp             ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH-HHHHH----HHSC-C----
T ss_pred             CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH-HHHHH----hccC-C----
Confidence                             00     234577899999999999999999999864332111 11111    1110 0    


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       +...  .....+..+.+++.+||+.||.+||+++++++
T Consensus       248 -~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          248 -PLLP--GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             -CCCC--SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -CCCC--ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence             0000  01123356788899999999999999999884

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.89  E-value=1.3e-24  Score=183.55  Aligned_cols=198  Identities=17%  Similarity=0.127  Sum_probs=122.7

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec------CeeE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK------GVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~------~~~~  105 (253)
                      .+|++.+.||+|+||.+++    .+++.||||++.....    ...+|+.+|+.++||||+++++++...      ..++
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~  129 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN  129 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence            3699999999999999655    4689999999975422    234799999999999999999998642      2377


Q ss_pred             EEEeeCCCCChhhhccC-----------------------------------CCCcC------------CCCccceeee-
Q 043709          106 LIYEHMPNKSLDYFLFD-----------------------------------PANKG------------RLGWGTRVRI-  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~-----------------------------------~~~~~------------~~~~~~~~~i-  137 (253)
                      +||||+++ +|..++..                                   .-+..            ..++.....+ 
T Consensus       130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~  208 (420)
T 1j1b_A          130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  208 (420)
T ss_dssp             EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence            99999985 44433210                                   00000            0000000000 


Q ss_pred             ------------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc---------CC
Q 043709          138 ------------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN---------DG  189 (253)
Q Consensus       138 ------------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~---------~~  189 (253)
                                        .+ ....|+.++|||||||++|||++|..||...... ..+...+ .....         ..
T Consensus       209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~-~~lg~p~~~~~~~~~~  286 (420)
T 1j1b_A          209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEII-KVLGTPTREQIREMNP  286 (420)
T ss_dssp             TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHH-HHHCSCCHHHHHHHCS
T ss_pred             cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH-HHhCCCCHHHHHhhCh
Confidence                              11 1236889999999999999999999998754321 1111111 11000         00


Q ss_pred             CccccccccCCC-----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          190 SLWDLMDPMLQT-----EASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       190 ~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      .......+....     .........+.+|+.+||..||.+||++.++++  .++++.
T Consensus       287 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~  344 (420)
T 1j1b_A          287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  344 (420)
T ss_dssp             CCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             hhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence            001111111110     011223467889999999999999999999984  455443

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.89  E-value=2e-24  Score=181.05  Aligned_cols=200  Identities=12%  Similarity=0.111  Sum_probs=122.2

Q ss_pred             hcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe------eE
Q 043709           35 TDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV------KI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~------~~  105 (253)
                      ..+|++.+.||+|+||.+++   ..+..+|+|++......    ..+|+.+++.++||||+++++++...+.      ++
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  114 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN  114 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence            34699999999999999665   24556999988653221    2379999999999999999999965443      88


Q ss_pred             EEEeeCCCCChhhhcc----------------------------------CCCCcCCCCc---cceeee-----------
Q 043709          106 LIYEHMPNKSLDYFLF----------------------------------DPANKGRLGW---GTRVRI-----------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~----------------------------------~~~~~~~~~~---~~~~~i-----------  137 (253)
                      +||||++++.+.....                                  ..-+...+-.   ...+.+           
T Consensus       115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~  194 (394)
T 4e7w_A          115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA  194 (394)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence            9999998754332210                                  0000000000   000001           


Q ss_pred             -----------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhh--------------
Q 043709          138 -----------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNL--------------  185 (253)
Q Consensus       138 -----------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~--------------  185 (253)
                                       .+ ....|+.++||||+||++|||++|..||....... .+.... ...              
T Consensus       195 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~-~~~g~p~~~~~~~~~~~  272 (394)
T 4e7w_A          195 GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEII-KVLGTPSREQIKTMNPN  272 (394)
T ss_dssp             TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH-HHHCCCCHHHHHHHCGG
T ss_pred             CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HHhCCCCHHHHHhhChh
Confidence                             11 12358899999999999999999999987543211 111111 100              


Q ss_pred             hcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          186 WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      .............+........+..+.+++.+||..||.+|||+.++++  .++++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             GSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             hhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence            0000111111001111111224467889999999999999999999995  355443

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.89  E-value=2.5e-23  Score=174.13  Aligned_cols=84  Identities=19%  Similarity=0.229  Sum_probs=67.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc--------CCCcceEeEEEE---
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ--------DINLVRIIGCCV---   99 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~~~~~~~---   99 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++... ....+.+.+|+.+++.++        |+||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            46899999999999999665    46889999999753 344567899999999985        788999999987   


Q ss_pred             -ecCeeEEEEeeCCCCChhhhc
Q 043709          100 -EKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus       100 -~~~~~~lv~e~~~~g~L~~~l  120 (253)
                       .....++||||+. |+|.+++
T Consensus       115 ~~~~~~~lv~e~~~-~~l~~~~  135 (397)
T 1wak_A          115 VNGTHICMVFEVLG-HHLLKWI  135 (397)
T ss_dssp             TTEEEEEEEECCCC-CBHHHHH
T ss_pred             CCCceEEEEEeccC-ccHHHHH
Confidence             4567999999995 4554443

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.89  E-value=1e-23  Score=177.30  Aligned_cols=82  Identities=17%  Similarity=0.246  Sum_probs=60.6

Q ss_pred             cCccc-cCccccccccceEee------CCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe--cCeeEE
Q 043709           36 DNFSM-ENKLGEGGFGPGKLL------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVKIL  106 (253)
Q Consensus        36 ~~~~~-~~~ig~G~fg~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~~l  106 (253)
                      +.|++ .+.||+|+||.+++.      +++.||||++...  .....+.+|+.+|+.++||||+++++++..  ...+++
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            34665 558999999996652      4778999999754  233578899999999999999999999965  678999


Q ss_pred             EEeeCCCCChhhhc
Q 043709          107 IYEHMPNKSLDYFL  120 (253)
Q Consensus       107 v~e~~~~g~L~~~l  120 (253)
                      ||||+.+ +|.+++
T Consensus        98 v~e~~~~-~l~~~~  110 (405)
T 3rgf_A           98 LFDYAEH-DLWHII  110 (405)
T ss_dssp             EEECCSE-EHHHHH
T ss_pred             EEeCCCC-CHHHHH
Confidence            9999984 665544

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.89  E-value=2.3e-23  Score=173.11  Aligned_cols=203  Identities=17%  Similarity=0.217  Sum_probs=131.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-----------CCCcceEeEEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-----------DINLVRIIGCCV   99 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~~~~~~~   99 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++... ....+.+.+|+.+++.+.           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35799999999999999655    46889999999753 234567889999999886           899999999998


Q ss_pred             ecC----eeEEEEeeCCCCChhhhccCCCCcCCCCccc------------------------------------------
Q 043709          100 EKG----VKILIYEHMPNKSLDYFLFDPANKGRLGWGT------------------------------------------  133 (253)
Q Consensus       100 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~------------------------------------------  133 (253)
                      ..+    ..+++|||+ +++|.+++...... .+++..                                          
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~  174 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHR-GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL  174 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHhhcc-CCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCc
Confidence            654    789999999 78998887431110 000000                                          


Q ss_pred             -eeee--------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc----chhhhhh
Q 043709          134 -RVRI--------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL----TLLGYVI  182 (253)
Q Consensus       134 -~~~i--------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~----~~~~~~~  182 (253)
                       .+.+                          ......++.++|||||||++|||++|..||........    .......
T Consensus       175 ~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  254 (373)
T 1q8y_A          175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII  254 (373)
T ss_dssp             EEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHH
T ss_pred             ceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHH
Confidence             0111                          12234578899999999999999999999975543211    1111110


Q ss_pred             Hhh-----------------hcCCCccccccc----------cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH-
Q 043709          183 WNL-----------------WNDGSLWDLMDP----------MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS-  234 (253)
Q Consensus       183 ~~~-----------------~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~-  234 (253)
                      ...                 ............          .............+.+++.+||+.||++|||++++++ 
T Consensus       255 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  334 (373)
T 1q8y_A          255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH  334 (373)
T ss_dssp             HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred             HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhC
Confidence            000                 000000000000          0011234567788999999999999999999999996 


Q ss_pred             -HHhhcc
Q 043709          235 -MLSNEI  240 (253)
Q Consensus       235 -~L~~~~  240 (253)
                       .+.+..
T Consensus       335 p~f~~~~  341 (373)
T 1q8y_A          335 PWLKDTL  341 (373)
T ss_dssp             GGGTTCT
T ss_pred             hhhhccc
Confidence             565544

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.89  E-value=6.8e-24  Score=173.80  Aligned_cols=85  Identities=22%  Similarity=0.373  Sum_probs=71.6

Q ss_pred             hcCccccCccccccccceEe-----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCC------cceEeEEEEecCe
Q 043709           35 TDNFSMENKLGEGGFGPGKL-----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN------LVRIIGCCVEKGV  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~~~~~~~~~~~  103 (253)
                      .++|++.+.||+|+||.+++     .+++.||||++... ....+.+.+|+.+++.++|+|      |+++++++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            46899999999999999664     35788999999753 344567889999999987665      9999999999999


Q ss_pred             eEEEEeeCCCCChhhhcc
Q 043709          104 KILIYEHMPNKSLDYFLF  121 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~  121 (253)
                      .++||||+ +++|.+++.
T Consensus        92 ~~lv~e~~-~~~l~~~l~  108 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIK  108 (339)
T ss_dssp             EEEEEECC-CCBHHHHHH
T ss_pred             EEEEEcCC-CCCHHHHHH
Confidence            99999999 789988874

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.89  E-value=6e-24  Score=189.67  Aligned_cols=178  Identities=15%  Similarity=0.173  Sum_probs=125.2

Q ss_pred             hcCccccCccccccccceEee-----CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCe-----
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-----NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGV-----  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~-----  103 (253)
                      .++|++.+.||+|+||.+++.     +++.||||++... .....+.+.+|+.+++.++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            368999999999999996652     5789999999754 34455678999999999999999999999987665     


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      .++||||+++++|.+++..     .+++.....+                                              
T Consensus       159 ~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~  233 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINS  233 (681)
T ss_dssp             EEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTC
T ss_pred             eEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhccc
Confidence            7999999999999887632     1111111111                                              


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ....+.++.++|||||||++|+|++|..|+......                ..       ......
T Consensus       234 ~~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~----------------~~-------~~~~~~  290 (681)
T 2pzi_A          234 FGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD----------------GL-------PEDDPV  290 (681)
T ss_dssp             CSCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS----------------SC-------CTTCHH
T ss_pred             CCccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc----------------cc-------cccccc
Confidence                         001122467899999999999999998876522110                00       001111


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCC-HHHHHHHHhhcc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPT-MLEIVSMLSNEI  240 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs-~~~il~~L~~~~  240 (253)
                      ......+.+++.+||+.||++||+ ++++...|...+
T Consensus       291 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          291 LKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             HHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            223457888999999999999995 666666666554

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.89  E-value=6.6e-25  Score=178.99  Aligned_cols=182  Identities=17%  Similarity=0.250  Sum_probs=126.2

Q ss_pred             cHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEeccccc------ccHHHHHHHHHHHHhcc--CCCcceE
Q 043709           27 SLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG------QGLEEFKNEMMLIAKLQ--DINLVRI   94 (253)
Q Consensus        27 ~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--H~nIv~~   94 (253)
                      ...+.....++|++.+.||+|+||.+++    .+++.||||++.....      ...+.+.+|+.+++.++  ||||+++
T Consensus        34 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~  113 (320)
T 3a99_A           34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL  113 (320)
T ss_dssp             ------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             cccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence            3445555677899999999999999665    4688999999975421      12345778999999996  5999999


Q ss_pred             eEEEEecCeeEEEEeeCCC-CChhhhccCCCCcCCCCccce-------------------------------------ee
Q 043709           95 IGCCVEKGVKILIYEHMPN-KSLDYFLFDPANKGRLGWGTR-------------------------------------VR  136 (253)
Q Consensus        95 ~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~-------------------------------------~~  136 (253)
                      ++++...+..+++||++.+ ++|.+++....   .+.....                                     ..
T Consensus       114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~k  190 (320)
T 3a99_A          114 LDWFERPDSFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK  190 (320)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEE
T ss_pred             EEEEecCCcEEEEEEcCCCCccHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEE
Confidence            9999999999999999986 89988873211   0111000                                     00


Q ss_pred             e---------------------------eeecCc-cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC
Q 043709          137 I---------------------------YALHGV-FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND  188 (253)
Q Consensus       137 i---------------------------~~~~~~-~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~  188 (253)
                      +                           ...... ++.++|||||||++|||++|..||.....        .    ...
T Consensus       191 L~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~----~~~  258 (320)
T 3a99_A          191 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------I----IRG  258 (320)
T ss_dssp             ECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------H----HHC
T ss_pred             EeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--------h----hcc
Confidence            0                           011122 36788999999999999999999853211        0    000


Q ss_pred             CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          189 GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      . .      ..    ....+..+.+++.+||+.||++|||++++++
T Consensus       259 ~-~------~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          259 Q-V------FF----RQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             C-C------CC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             c-c------cc----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0 0      01    1123356788999999999999999999986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.88  E-value=3.5e-23  Score=171.73  Aligned_cols=186  Identities=11%  Similarity=0.078  Sum_probs=130.5

Q ss_pred             HHhcCccccCccccccccceEee---------CCCEEEEEEecccccccHHHHHHHHHHHHhcc---CCCcceEeEEEEe
Q 043709           33 AATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ---DINLVRIIGCCVE  100 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~~~~~~~~  100 (253)
                      ...++|.+.+.||+|+||.+++.         +++.||||++...   ....+..|+.+++.++   |+||+++++++..
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~  138 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF  138 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence            34567999999999999996553         5789999999753   3456788888888875   9999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCC--CcCCCCccc---------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPA--NKGRLGWGT---------------------------------------------  133 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~---------------------------------------------  133 (253)
                      .+..++|||||++|+|.+++....  ....+++..                                             
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~  218 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDL  218 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccc
Confidence            999999999999999999884200  000011110                                             


Q ss_pred             --eeee-------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhh
Q 043709          134 --RVRI-------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGY  180 (253)
Q Consensus       134 --~~~i-------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~  180 (253)
                        .+.+                               ...+..|+.++|||||||++|||++|+.||.........    
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----  294 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK----  294 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE----
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee----
Confidence              0111                               122344789999999999999999999998643221110    


Q ss_pred             hhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCC-CCHHHHHHHHhhcccC
Q 043709          181 VIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDR-PTMLEIVSMLSNEIVN  242 (253)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R-Ps~~~il~~L~~~~~~  242 (253)
                                    ..........   ...+.+++..|++.+|.+| |+++++.+.|++.+..
T Consensus       295 --------------~~~~~~~~~~---~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          295 --------------PEGLFRRLPH---LDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             --------------ECSCCTTCSS---HHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             --------------echhccccCc---HHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence                          1111111111   3345567777999999998 5788888888887743

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.88  E-value=6e-23  Score=171.34  Aligned_cols=139  Identities=18%  Similarity=0.252  Sum_probs=101.7

Q ss_pred             HHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CC-----CcceEeEEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DI-----NLVRIIGCCV   99 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~~~~~~~   99 (253)
                      ......++|++.+.||+|+||.+++    .+++.||||++... ......+..|+.+++.+. |+     +|+++++++.
T Consensus        48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  126 (382)
T 2vx3_A           48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM  126 (382)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred             cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence            3334467899999999999999665    46889999999753 334567788999998885 55     4999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCCCcCCCCccc----------------------------------------eeee--
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGT----------------------------------------RVRI--  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~----------------------------------------~~~i--  137 (253)
                      ..+..++||||+. |+|.+++...... .+++..                                        .+.+  
T Consensus       127 ~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~D  204 (382)
T 2vx3_A          127 FRNHLCLVFEMLS-YNLYDLLRNTNFR-GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD  204 (382)
T ss_dssp             ETTEEEEEEECCC-CBHHHHHHHTTTS-CCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred             cCCceEEEEecCC-CCHHHHHhhcCcC-CCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence            9999999999997 5988877432100 000000                                        0001  


Q ss_pred             ------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCC
Q 043709          138 ------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYN  171 (253)
Q Consensus       138 ------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~  171 (253)
                                              ......++.++|||||||++|||++|..||....
T Consensus       205 FG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          205 FGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             CTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                                    1223457889999999999999999999987543

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.87  E-value=6.7e-23  Score=169.01  Aligned_cols=84  Identities=25%  Similarity=0.347  Sum_probs=68.5

Q ss_pred             hcCccccCccccccccceEe----eCC-CEEEEEEecccccccHHHHHHHHHHHHhccCCC------cceEeEEEEecCe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNG-EQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN------LVRIIGCCVEKGV  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~~~~~~~~~~~  103 (253)
                      .++|++.+.||+|+||.+++    .++ ..||+|++... ....+.+.+|+.+++.++|+|      ++.+++++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            46899999999999999665    234 68999999753 344567889999999998766      9999999999999


Q ss_pred             eEEEEeeCCCCChhhhc
Q 043709          104 KILIYEHMPNKSLDYFL  120 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l  120 (253)
                      .++||||+. |++.+++
T Consensus        97 ~~lv~e~~~-~~l~~~l  112 (355)
T 2eu9_A           97 MCIAFELLG-KNTFEFL  112 (355)
T ss_dssp             EEEEEECCC-CBHHHHH
T ss_pred             EEEEEeccC-CChHHHH
Confidence            999999995 5665554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.76  E-value=3.9e-19  Score=149.73  Aligned_cols=177  Identities=12%  Similarity=0.071  Sum_probs=107.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccC-CCcceE---------e--
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQD-INLVRI---------I--   95 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H-~nIv~~---------~--   95 (253)
                      ...|...+.||+|+||.|++    .+++.||||++...   .....+.+.+|+.+++.+.| +|+...         .  
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            34578889999999999665    45899999999843   23446789999999999977 322111         1  


Q ss_pred             ----------EEEEe-----cCeeEEEEeeCCCCChhhhccC----CCCcCCCCccceeee-------------------
Q 043709           96 ----------GCCVE-----KGVKILIYEHMPNKSLDYFLFD----PANKGRLGWGTRVRI-------------------  137 (253)
Q Consensus        96 ----------~~~~~-----~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i-------------------  137 (253)
                                .+...     ....+++|+++ +|+|.+++..    ......+.+..+..+                   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr  235 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  235 (413)
T ss_dssp             EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence                      11111     22356777765 4788877620    000000111111000                   


Q ss_pred             ------------------------------------------ee----------ecCccccccceeehhHHHHHHHhCCC
Q 043709          138 ------------------------------------------YA----------LHGVFSIKSDVFSFGVLLLETLSSKK  165 (253)
Q Consensus       138 ------------------------------------------~~----------~~~~~~~~~DiwSlG~~l~ell~~~~  165 (253)
                                                                .+          ....++.++|||||||++|||++|+.
T Consensus       236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~  315 (413)
T 3dzo_A          236 YLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL  315 (413)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             CcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence                                                      11          23346779999999999999999999


Q ss_pred             CcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 043709          166 NAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       166 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      ||........  .             .......      ...+..+.+++.+||+.||++||++.+++
T Consensus       316 Pf~~~~~~~~--~-------------~~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          316 PNTDDAALGG--S-------------EWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             CCCTTGGGSC--S-------------GGGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             CCCCcchhhh--H-------------HHHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            9864332110  0             0001000      02235688899999999999999976664

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.68  E-value=2.4e-18  Score=140.96  Aligned_cols=86  Identities=17%  Similarity=0.211  Sum_probs=68.6

Q ss_pred             hcCccccCccccccccceEe--eCCCEEEEEEecccc--------cccHHHHHHHHHHHHhcc---------CCCcceEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQS--------GQGLEEFKNEMMLIAKLQ---------DINLVRII   95 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~nIv~~~   95 (253)
                      .++|++.+.||+|+||.+++  .+++.||||++....        ....+.+.+|+.+++.++         ||||+++.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            46799999999999999655  578999999997542        233478999999999886         88888888


Q ss_pred             EEEE------------------------------ecCeeEEEEeeCCCCChhhhc
Q 043709           96 GCCV------------------------------EKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        96 ~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      +++.                              ..+.+++|||||.+|++.+.+
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~  153 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQM  153 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGG
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHH
Confidence            7754                              167899999999999655544

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.28  E-value=3.5e-13  Score=117.62  Aligned_cols=71  Identities=17%  Similarity=0.241  Sum_probs=61.1

Q ss_pred             eEeeCCCEEEEEEeccc----------ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEEEeeCCCCChhhhc
Q 043709           52 GKLLNGEQVAVKRLSSQ----------SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        52 ~~~~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      .....|+.+|+|++...          .....++|.+|+.+|+++ .|+||+++++++.+++.+||||||++||+|.++|
T Consensus       254 rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i  333 (569)
T 4azs_A          254 RRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDML  333 (569)
T ss_dssp             EEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHH
T ss_pred             ccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHH
Confidence            44567999999999753          123346799999999999 7999999999999999999999999999999999


Q ss_pred             cC
Q 043709          121 FD  122 (253)
Q Consensus       121 ~~  122 (253)
                      ..
T Consensus       334 ~~  335 (569)
T 4azs_A          334 AA  335 (569)
T ss_dssp             HT
T ss_pred             Hh
Confidence            54

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.89  E-value=2.6e-09  Score=92.71  Aligned_cols=84  Identities=15%  Similarity=0.065  Sum_probs=60.6

Q ss_pred             cccCccccccccceEe--eCCCEEEEEEecccc--------cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           39 SMENKLGEGGFGPGKL--LNGEQVAVKRLSSQS--------GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        39 ~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ...+.||+|+||.+++  ..+..+++|+.....        ....+++.+|+.++++++||||+++..++...+..++||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            3457899999999764  568899999875321        112356899999999999999997766666778889999


Q ss_pred             eeCCCCChhhhccC
Q 043709          109 EHMPNKSLDYFLFD  122 (253)
Q Consensus       109 e~~~~g~L~~~l~~  122 (253)
                      ||+++|+|.+++..
T Consensus       419 E~~~ggsL~~~l~~  432 (540)
T 3en9_A          419 SYINGKLAKDVIED  432 (540)
T ss_dssp             ECCCSEEHHHHSTT
T ss_pred             ECCCCCCHHHHHHH
Confidence            99999999999953

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.74  E-value=9.7e-09  Score=81.75  Aligned_cols=86  Identities=15%  Similarity=0.078  Sum_probs=63.3

Q ss_pred             HHHHHhcCccccCccccccccceEe---eCCCEEEEEEeccccc------------------ccHHHHHHHHHHHHhccC
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSG------------------QGLEEFKNEMMLIAKLQD   88 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H   88 (253)
                      .+......|++.+.||+|+||.++.   .+++.||+|.++....                  .....+.+|+.+++.++|
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~  163 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG  163 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence            3334445577779999999999555   3688999999974321                  134568999999999984


Q ss_pred             CCcceEeEEEEecCeeEEEEeeCCCCChhhhc
Q 043709           89 INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        89 ~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                         +++.+++.. +..++||||+++|+|.+ +
T Consensus       164 ---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l  190 (282)
T 1zar_A          164 ---LAVPKVYAW-EGNAVLMELIDAKELYR-V  190 (282)
T ss_dssp             ---SSSCCEEEE-ETTEEEEECCCCEEGGG-C
T ss_pred             ---CCcCeEEec-cceEEEEEecCCCcHHH-c
Confidence               555554433 55799999999999998 5

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.16  E-value=1.7e-06  Score=67.73  Aligned_cols=71  Identities=13%  Similarity=0.136  Sum_probs=51.5

Q ss_pred             ccccCccccccccceEe----eCCCE--EEEEEecccccc------------------------cHHHHHHHHHHHHhcc
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQ--VAVKRLSSQSGQ------------------------GLEEFKNEMMLIAKLQ   87 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~   87 (253)
                      |++.+.||+|+||.+++    .+|+.  ||||+++.....                        ....+.+|+.+++.+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            67889999999999654    47888  999997643111                        1136889999999998


Q ss_pred             CCCc--ceEeEEEEecCeeEEEEeeCC
Q 043709           88 DINL--VRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        88 H~nI--v~~~~~~~~~~~~~lv~e~~~  112 (253)
                      |+++  ..+++.    +..++||||+.
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g  151 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIG  151 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCE
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecC
Confidence            8864  334432    35689999994

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.01  E-value=1.4e-06  Score=71.99  Aligned_cols=82  Identities=10%  Similarity=0.066  Sum_probs=53.7

Q ss_pred             CccccCccccccccceEe---eCCCEEEEEEeccccc--------------ccHH--------HHHHHHHHHHhccCCCc
Q 043709           37 NFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSG--------------QGLE--------EFKNEMMLIAKLQDINL   91 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~H~nI   91 (253)
                      -|++...||+|++|.++.   .+|+.||||+++....              ....        ...+|...|..+.+.++
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            499999999999999766   4689999999863210              0011        12356666777755444


Q ss_pred             ceEeEEEEecCeeEEEEeeCCCCChhhhc
Q 043709           92 VRIIGCCVEKGVKILIYEHMPNKSLDYFL  120 (253)
Q Consensus        92 v~~~~~~~~~~~~~lv~e~~~~g~L~~~l  120 (253)
                      ....-+....  .+|||||+.|++|..+.
T Consensus       176 ~vp~p~~~~~--~~LVME~i~G~~L~~l~  202 (397)
T 4gyi_A          176 PVPEPIAQSR--HTIVMSLVDALPMRQVS  202 (397)
T ss_dssp             SCCCEEEEET--TEEEEECCSCEEGGGCC
T ss_pred             CCCeeeeccC--ceEEEEecCCccHhhhc
Confidence            3222222222  37999999998887765

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.68  E-value=0.00015  Score=56.54  Aligned_cols=88  Identities=8%  Similarity=-0.013  Sum_probs=68.4

Q ss_pred             HHhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEe
Q 043709           33 AATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ..-.+|.+...++.|+.+.++.  ..+..+++|............+.+|+.+++.+. |..+.++++++...+..|++||
T Consensus        11 ~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e   90 (263)
T 3tm0_A           11 KLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS   90 (263)
T ss_dssp             HHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred             HHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence            3345788878888777776554  346899999987532233346899999999984 7788899999998889999999


Q ss_pred             eCCCCChhhhc
Q 043709          110 HMPNKSLDYFL  120 (253)
Q Consensus       110 ~~~~g~L~~~l  120 (253)
                      |++|.+|.+.+
T Consensus        91 ~i~G~~l~~~~  101 (263)
T 3tm0_A           91 EADGVLCSEEY  101 (263)
T ss_dssp             CCSSEEHHHHC
T ss_pred             ecCCeehhhcc
Confidence            99999988764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.48  E-value=0.004  Score=48.01  Aligned_cols=77  Identities=17%  Similarity=0.162  Sum_probs=53.9

Q ss_pred             CccccCcccccc-ccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCC--cceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGG-FGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN--LVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~-fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++.+ +.++.|+ .+.++.   .++..+++|.....   ....+..|+.+++.+.+.+  +.+++++....+..+++|||
T Consensus        21 ~~~~-~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~   96 (264)
T 1nd4_A           21 GYDW-AQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE   96 (264)
T ss_dssp             TCEE-EECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred             CCce-EecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence            4444 3344444 455443   34677999987643   2345789999999986444  56688888877889999999


Q ss_pred             CCCCChh
Q 043709          111 MPNKSLD  117 (253)
Q Consensus       111 ~~~g~L~  117 (253)
                      ++|.+|.
T Consensus        97 i~G~~l~  103 (264)
T 1nd4_A           97 VPGQDLL  103 (264)
T ss_dssp             CSSEETT
T ss_pred             cCCcccC
Confidence            9998885

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=95.64  E-value=0.019  Score=46.75  Aligned_cols=80  Identities=14%  Similarity=0.226  Sum_probs=54.9

Q ss_pred             cccCccccccccceEe--eCCCEEEEEEec--ccc-cccHHHHHHHHHHHHhcc--CCCcceEeEEEEec---CeeEEEE
Q 043709           39 SMENKLGEGGFGPGKL--LNGEQVAVKRLS--SQS-GQGLEEFKNEMMLIAKLQ--DINLVRIIGCCVEK---GVKILIY  108 (253)
Q Consensus        39 ~~~~~ig~G~fg~~~~--~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~nIv~~~~~~~~~---~~~~lv~  108 (253)
                      ..++.++.|.++.++.  ..+..+++|+..  ... ......+.+|..+++.+.  +..+.++++++.+.   +..++||
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             ceEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            3456788888887554  345678888776  321 122346888999999986  56688999988776   4589999


Q ss_pred             eeCCCCChhh
Q 043709          109 EHMPNKSLDY  118 (253)
Q Consensus       109 e~~~~g~L~~  118 (253)
                      ||++|..+.+
T Consensus       121 e~v~G~~l~~  130 (359)
T 3dxp_A          121 EFVSGRVLWD  130 (359)
T ss_dssp             ECCCCBCCCC
T ss_pred             EecCCeecCC
Confidence            9999987753

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=93.88  E-value=0.3  Score=38.91  Aligned_cols=74  Identities=23%  Similarity=0.176  Sum_probs=55.8

Q ss_pred             ccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhcc---CCCcceEeEEEEecCeeEEEEeeCCCC
Q 043709           40 MENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ---DINLVRIIGCCVEKGVKILIYEHMPNK  114 (253)
Q Consensus        40 ~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~~~~~~~~~~~~~lv~e~~~~g  114 (253)
                      -.+.|+.|....++.  ..+..+++|.....   ....+..|...|+.+.   ...+.++++++...+..+++|||+++.
T Consensus        40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eeEEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            345688887776443  34678889887642   3567889999999884   367888898888778899999999987


Q ss_pred             Ch
Q 043709          115 SL  116 (253)
Q Consensus       115 ~L  116 (253)
                      .+
T Consensus       117 ~~  118 (312)
T 3jr1_A          117 KN  118 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=91.53  E-value=0.4  Score=37.51  Aligned_cols=76  Identities=16%  Similarity=0.132  Sum_probs=52.2

Q ss_pred             CccccCccccccccceE---eeCCCEEEEEEecccccccHHHHHHHHHHHHhcc-C--CCcceEeEEEEecCeeEEEEee
Q 043709           37 NFSMENKLGEGGFGPGK---LLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-D--INLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~---~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ...-++.+|.|..+.++   +.+|+.|.+|+-..........|..|...|+.+. .  --+.+++++  +  .-+++|||
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~   91 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEW   91 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEEC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEe
Confidence            45566788888888744   4678999999876554444456889999999884 2  234445543  2  23789999


Q ss_pred             CCCCCh
Q 043709          111 MPNKSL  116 (253)
Q Consensus       111 ~~~g~L  116 (253)
                      ..++..
T Consensus        92 l~~~~~   97 (288)
T 3f7w_A           92 VDERPP   97 (288)
T ss_dssp             CCCCCC
T ss_pred             ecccCC
Confidence            987654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=91.13  E-value=0.68  Score=35.57  Aligned_cols=75  Identities=17%  Similarity=0.093  Sum_probs=53.7

Q ss_pred             ccccccccc-eEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEeeCCCCCh
Q 043709           43 KLGEGGFGP-GKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYEHMPNKSL  116 (253)
Q Consensus        43 ~ig~G~fg~-~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e~~~~g~L  116 (253)
                      .+..|..+. ++.    ..+..+.+|+-..   .....+.+|...|+.+. +--+-++++++.+.+..+++||+++|.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            445555553 333    2356788888654   23456888999999884 44477888999888999999999999887


Q ss_pred             hhhc
Q 043709          117 DYFL  120 (253)
Q Consensus       117 ~~~l  120 (253)
                      .+..
T Consensus       108 ~~~~  111 (272)
T 4gkh_A          108 FQVL  111 (272)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            6654

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=90.55  E-value=0.51  Score=37.33  Aligned_cols=75  Identities=21%  Similarity=0.240  Sum_probs=52.5

Q ss_pred             cCccccccccceEeeCCCEEEEEEecccccccHHHHHHHHHHHHhccCC---CcceEeEEEE-ecCeeEEEEeeCCCCCh
Q 043709           41 ENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDI---NLVRIIGCCV-EKGVKILIYEHMPNKSL  116 (253)
Q Consensus        41 ~~~ig~G~fg~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~~~~~~~-~~~~~~lv~e~~~~g~L  116 (253)
                      ++.++.|....++.- +..+++|.-..  ......+.+|..+|+.+.+.   .|.+.+.+.. ..+..+++|+|++|.++
T Consensus        24 v~~l~~G~~n~v~~v-g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l  100 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL  100 (306)
T ss_dssp             EEEEEECSSEEEEEE-TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred             eeecCCCcceeEEEE-CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence            345666666665555 66788887532  23456789999999999642   3556666664 34567899999999888


Q ss_pred             hh
Q 043709          117 DY  118 (253)
Q Consensus       117 ~~  118 (253)
                      ..
T Consensus       101 ~~  102 (306)
T 3tdw_A          101 GE  102 (306)
T ss_dssp             HH
T ss_pred             ch
Confidence            76

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=90.14  E-value=0.55  Score=38.55  Aligned_cols=72  Identities=8%  Similarity=0.171  Sum_probs=46.9

Q ss_pred             cCccccccccceEee----CCCEEEEEEecccc-------cccHHHHHHHHHHHHhccC--C-CcceEeEEEEecCeeEE
Q 043709           41 ENKLGEGGFGPGKLL----NGEQVAVKRLSSQS-------GQGLEEFKNEMMLIAKLQD--I-NLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        41 ~~~ig~G~fg~~~~~----~~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~H--~-nIv~~~~~~~~~~~~~l  106 (253)
                      .+.+|.|..+.++..    .+..++||......       ....+++..|..+++.+..  | .+.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            467899988885543    45789999865321       1234567889999988742  3 34456644  3455689


Q ss_pred             EEeeCCCC
Q 043709          107 IYEHMPNK  114 (253)
Q Consensus       107 v~e~~~~g  114 (253)
                      ||||+++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999864

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=86.92  E-value=1.1  Score=35.26  Aligned_cols=75  Identities=12%  Similarity=0.152  Sum_probs=50.8

Q ss_pred             cCccccccccceEeeCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCC--cceEeEEEEecC---eeEEEEeeCCCC
Q 043709           41 ENKLGEGGFGPGKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDIN--LVRIIGCCVEKG---VKILIYEHMPNK  114 (253)
Q Consensus        41 ~~~ig~G~fg~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~n--Iv~~~~~~~~~~---~~~lv~e~~~~g  114 (253)
                      ++.++.|....++.-. ..+++|.....  .....+.+|..+++.+ .+..  +.+++......+   ..|+||++++|.
T Consensus        25 i~~~~~G~~n~v~~v~-~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~  101 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV  101 (304)
T ss_dssp             CCEEEECSSEEEEEST-TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred             eEecCCCCcceEEEEC-CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence            4567888877766654 56888886532  3456789999999988 3433  344554443333   358999999998


Q ss_pred             Chhh
Q 043709          115 SLDY  118 (253)
Q Consensus       115 ~L~~  118 (253)
                      ++..
T Consensus       102 ~l~~  105 (304)
T 3sg8_A          102 PLTP  105 (304)
T ss_dssp             ECCH
T ss_pred             ECCc
Confidence            8865

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=86.49  E-value=0.078  Score=44.89  Aligned_cols=60  Identities=13%  Similarity=0.061  Sum_probs=19.3

Q ss_pred             cccCccccccccceEe----eCCCEEEE------EEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec
Q 043709           39 SMENKLGEGGFGPGKL----LNGEQVAV------KRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK  101 (253)
Q Consensus        39 ~~~~~ig~G~fg~~~~----~~~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~  101 (253)
                      .+.+.+|   ||.++.    .....|||      |.....  +.+....+.+|..+++.++|||+++.+++....
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~~  216 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVHT  216 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEEC
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEee
Confidence            4556777   887332    22357888      766543  334456788999999999999999999988754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=83.90  E-value=0.94  Score=36.44  Aligned_cols=78  Identities=6%  Similarity=0.039  Sum_probs=51.0

Q ss_pred             Ccc-ccccccceEee--C--------CCEEEEEEecccc---cccHHHHHHHHHHHHhcc-C--CCcceEeEEEEec---
Q 043709           42 NKL-GEGGFGPGKLL--N--------GEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQ-D--INLVRIIGCCVEK---  101 (253)
Q Consensus        42 ~~i-g~G~fg~~~~~--~--------~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~~~~~~~~~---  101 (253)
                      +.| +.|..+.++.-  .        +..+++|......   ......+.+|+.+++.+. +  -.+.++++++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            456 66665554432  1        5678888765422   101245788999998884 3  3577888887655   


Q ss_pred             CeeEEEEeeCCCCChhhh
Q 043709          102 GVKILIYEHMPNKSLDYF  119 (253)
Q Consensus       102 ~~~~lv~e~~~~g~L~~~  119 (253)
                      +..+++|||++|.++.+.
T Consensus       106 g~~~~v~e~l~G~~l~~~  123 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPDV  123 (357)
T ss_dssp             SSCEEEEECCCCBCCCBT
T ss_pred             CCceEEEEecCCCChhhc
Confidence            357899999998777654

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=82.72  E-value=0.7  Score=34.75  Aligned_cols=23  Identities=13%  Similarity=0.193  Sum_probs=19.3

Q ss_pred             cccccceeehhHHHHHHHhCCCC
Q 043709          144 FSIKSDVFSFGVLLLETLSSKKN  166 (253)
Q Consensus       144 ~~~~~DiwSlG~~l~ell~~~~p  166 (253)
                      .+.+.=|||||+++|..+-.+.|
T Consensus       113 ~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A          113 CMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             chHHHHHHHHHHHHHHHhhcCCC
Confidence            45777899999999999987665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	253
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-22
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-22
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-22
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-22
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-20
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	5e-19
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	7e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-18
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-18
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-18
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-18
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-17
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-17
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-16
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-16
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	7e-16
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-15
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-06
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-15
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-15
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-15
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	8e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	8e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	0.001
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-15
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-14
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-14
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	0.002
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	6e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-13
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-13
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-13
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-12
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-06
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-12
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-12
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-12
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-11
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-11
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-10
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-09
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-09
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-09
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	5e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-09
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	7e-09
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	0.001
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	3e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	9e-07
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	4e-04

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.3 bits (226), Expect = 1e-22
 Identities = 40/257 (15%), Positives = 86/257 (33%), Gaps = 57/257 (22%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
            + +   +LG G FG    GK      VA+K +   S    +EF  E  ++  L    LV
Sbjct: 4   KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------YALHGVF 144
           ++ G C ++    +I E+M N  L  +L +   + R      + +          L    
Sbjct: 63  QLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYLESKQ 120

Query: 145 SIKSDVFSFGVLLLETLSSK----------KNAHFYNTNS-------------------- 174
            +  D+ +   L+ +    K           +  + ++                      
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180

Query: 175 -------------LTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRE 221
                        +  LG + +  + +    + +   L+    +   ++   +   C+ E
Sbjct: 181 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHE 240

Query: 222 NATDRPTMLEIVSMLSN 238
            A +RPT   ++S + +
Sbjct: 241 KADERPTFKILLSNILD 257

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.9 bits (225), Expect = 2e-22
 Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 67/261 (25%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
              +   ++G G FG    G  LN ++VA+K +  +     E+F  E  ++ KL    LV
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKS---- 148
           ++ G C+E+    L++E M +  L  +L              + +    G+  ++     
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123

Query: 149 --DVFSFGVLL------------LETLSSKKNAHFYNTNSLTL----------------- 177
             D+ +   L+            +                  +                 
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183

Query: 178 ----LGYVIWNLWNDG-----------------SLWDLMDPMLQTEASYPILKRYSNVDL 216
                G ++W ++++G                 + + L  P L +   Y I+        
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNH------ 237

Query: 217 FCFRENATDRPTMLEIVSMLS 237
            C++E   DRP    ++  L+
Sbjct: 238 -CWKERPEDRPAFSRLLRQLA 257

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.6 bits (224), Expect = 3e-22
 Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 57/258 (22%)

Query: 36  DNFSMENKLGEGGFGP---GKLLN-GEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
            + +M++KLG G +G    G        VAVK L   + + +EEF  E  ++ +++  NL
Sbjct: 17  TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNL 75

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--------LHGV 143
           V+++G C  +    +I E M   +L  +L +  N+  +     + +          L   
Sbjct: 76  VQLLGVCTREPPFYIITEFMTYGNLLDYLRE-CNRQEVSAVVLLYMATQISSAMEYLEKK 134

Query: 144 FSIKSDVFSFGVLLLET----LSSKKNAHFYNTNSLTL---------------------- 177
             I  D+ +   L+ E     ++    +     ++ T                       
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194

Query: 178 -------LGYVIWNL----------WNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFR 220
                   G ++W +           +   +++L++   + E      ++   +   C++
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQ 254

Query: 221 ENATDRPTMLEIVSMLSN 238
            N +DRP+  EI      
Sbjct: 255 WNPSDRPSFAEIHQAFET 272

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.1 bits (223), Expect = 4e-22
 Identities = 53/257 (20%), Positives = 91/257 (35%), Gaps = 57/257 (22%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           +   +  +LG G FG    G      +VAVK L  Q     + F  E  L+ +LQ   LV
Sbjct: 13  ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------YALHGVF 144
           R+     ++ +  +I E+M N SL  FL  P +  +L     + +          +    
Sbjct: 72  RLYAVVTQEPI-YIITEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEERN 129

Query: 145 SIKSDVFSFGVLLLETLSSK-----------KNAHFYNTNSLTLLGYVIWNLWNDGS--- 190
            I  D+ +  +L+ +TLS K            N +     +   + +      N G+   
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189

Query: 191 ----------LWDLM-------DPMLQTEASYPILKRYSNVD------------LFCFRE 221
                     L +++         M   E    + + Y  V               C++E
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKE 249

Query: 222 NATDRPTMLEIVSMLSN 238
              DRPT   + S+L +
Sbjct: 250 RPEDRPTFDYLRSVLED 266

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 4e-22
 Identities = 45/253 (17%), Positives = 91/253 (35%), Gaps = 53/253 (20%)

Query: 36  DNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
               +   +G+G FG   L    G +VAVK + + +    + F  E  ++ +L+  NLV+
Sbjct: 7   KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQ 64

Query: 94  IIGCCVEKGVKI-LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------YALHGVF 144
           ++G  VE+   + ++ E+M   SL  +L     +  LG    ++           L G  
Sbjct: 65  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEGNN 123

Query: 145 SIKSDVFSFGVLLLETLSSKK----NAHFYNTNSLTL----------------------- 177
            +  D+ +  VL+ E   +K          ++   T                        
Sbjct: 124 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 183

Query: 178 --LGYVIWNLWNDGSLWDLMDPM------LQTEASYPILKRYS----NVDLFCFRENATD 225
              G ++W +++ G +     P+      ++                 V   C+  +A  
Sbjct: 184 WSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAM 243

Query: 226 RPTMLEIVSMLSN 238
           RP+ L++   L +
Sbjct: 244 RPSFLQLREQLEH 256

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 1e-20
 Identities = 45/271 (16%), Positives = 96/271 (35%), Gaps = 65/271 (23%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
              ++  ++G G FG    GK      V +  +++ + Q L+ FKNE+ ++ K + +N++
Sbjct: 8   GQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--------LHGVF 144
             +G      +  ++ +     SL + L     + +      + I          LH   
Sbjct: 68  LFMGYSTAPQL-AIVTQWCEGSSLYHHLHI--IETKFEMIKLIDIARQTAQGMDYLHAKS 124

Query: 145 SIKSDVFSFGVLLLETLSSK-------------KNAHFYNTNSLTL-------------- 177
            I  D+ S  + L E L+ K               +H +   S ++              
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184

Query: 178 ----------LGYVIWNL------WNDGSLWDLMDPMLQTEASYPILKRYSN------VD 215
                      G V++ L      +++ +  D +  M+      P L +  +        
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKR 244

Query: 216 LF--CFRENATDRPTMLEIVSMLSNEIVNLP 244
           L   C ++   +RP   +I++ +     +LP
Sbjct: 245 LMAECLKKKRDERPLFPQILASIELLARSLP 275

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 2e-20
 Identities = 45/267 (16%), Positives = 87/267 (32%), Gaps = 57/267 (21%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
           ++  +E KLG+G FG    G      +VA+K L   +    E F  E  ++ KL+   LV
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 75

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--------LHGVF 144
           ++     E+ +  ++ E+M   SL  FL     K  L     V + A        +  + 
Sbjct: 76  QLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVERMN 133

Query: 145 SIKSDVFSFGVLL------------LETLSSKKNAHFYNTNSLTL--------------- 177
            +  D+ +  +L+            L  L               +               
Sbjct: 134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 193

Query: 178 ------LGYVIWNLWNDG----------SLWDLMDPMLQTEASYPILKRYSNVDLFCFRE 221
                  G ++  L   G           + D ++   +        +   ++   C+R+
Sbjct: 194 KSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRK 253

Query: 222 NATDRPTMLEIVSMLSNEIVNLPYPQQ 248
              +RPT   + + L +   +     Q
Sbjct: 254 EPEERPTFEYLQAFLEDYFTSTEPQYQ 280

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (201), Expect = 5e-19
 Identities = 47/265 (17%), Positives = 83/265 (31%), Gaps = 67/265 (25%)

Query: 36  DNFSMENKLGEGGFG-------PGKLLNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAK 85
            +  +  KLG+G FG                VAVK L        + +++F  E+  +  
Sbjct: 8   KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------- 137
           L   NL+R+ G  +   +K+ + E  P  SL   L    ++G    GT  R         
Sbjct: 68  LDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRK--HQGHFLLGTLSRYAVQVAEGM 124

Query: 138 YALHGVFSIKSDVFSFGVLL------------LETLSSKKNAHFYNTNSLTL-------- 177
             L     I  D+ +  +LL            L     + + H+       +        
Sbjct: 125 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184

Query: 178 ---------------LGYVIWNL-------WNDGSLWDLMDPMLQTEASYPILKRYS--- 212
                           G  +W +       W   +   ++  + +     P  +      
Sbjct: 185 SLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI 244

Query: 213 -NVDLFCFRENATDRPTMLEIVSML 236
            NV + C+     DRPT + +   L
Sbjct: 245 YNVMVQCWAHKPEDRPTFVALRDFL 269

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.8 bits (201), Expect = 7e-19
 Identities = 45/284 (15%), Positives = 85/284 (29%), Gaps = 79/284 (27%)

Query: 36  DNFSMENKLGEGGFG---------PGKLLNGEQVAVKRLSSQSGQG-LEEFKNEMMLIAK 85
           +  S    LG G FG           K      VAVK L   +     E   +E+ +++ 
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 86  LQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD---------------PANKGRL 129
           L + +N+V ++G C   G  ++I E+     L  FL                   ++  L
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 130 GWGTRVRIYA--------LHGVFSIKSDVFSFGVLLLE-------------TLSSKKNAH 168
                +            L     I  D+ +  +LL                + +  N  
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202

Query: 169 FYNTNSLTL---------------------LGYVIWNLWNDGS-----------LWDLMD 196
                 L +                      G  +W L++ GS            + ++ 
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262

Query: 197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI 240
              +  +         ++   C+  +   RPT  +IV ++  +I
Sbjct: 263 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 1e-18
 Identities = 44/281 (15%), Positives = 80/281 (28%), Gaps = 68/281 (24%)

Query: 34  ATDNFSMEN-KLGEGGFGP---GKLL---NGEQVAVKRLSSQSGQG-LEEFKNEMMLIAK 85
             DN  + + +LG G FG    G          VA+K L   + +   EE   E  ++ +
Sbjct: 6   KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQ 65

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA------ 139
           L +  +VR+IG C  + + +L+ E      L  FL     +  +       +        
Sbjct: 66  LDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGM 122

Query: 140 --LHGVFSIKSDVFSFGVLLLET-------------LSSKKNAHFYNTNSLTLLGYVIWN 184
             L     +  D+ +  VLL+               L +  + +   +     L +    
Sbjct: 123 KYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE 182

Query: 185 LWNDG---------SLWDLMDPMLQTEASYPILKRYSNVDLF------------------ 217
             N           S    M   L         K+    ++                   
Sbjct: 183 CINFRKFSSRSDVWSYGVTMWEALSY--GQKPYKKMKGPEVMAFIEQGKRMECPPECPPE 240

Query: 218 -------CFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
                  C+     DRP  L +   +     +L    +   
Sbjct: 241 LYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGHH 281

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.1 bits (199), Expect = 1e-18
 Identities = 45/287 (15%), Positives = 100/287 (34%), Gaps = 71/287 (24%)

Query: 36  DNFSMENKLGEGGFG---------PGKLLNGEQVAVKRLS-SQSGQGLEEFKNEMMLIAK 85
           +  +M  +LG+G FG           K     +VA+K ++ + S +   EF NE  ++ +
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 79

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLF-------DPANKGRLGWGTRVRI- 137
               ++VR++G   +    ++I E M    L  +L        +            +++ 
Sbjct: 80  FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 139

Query: 138 -YALHGVFSIKS------DVFSFGVLLLETLSSK-------------------------- 164
                G+  + +      D+ +   ++ E  + K                          
Sbjct: 140 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 199

Query: 165 --------KNAHFYNTNSLTLLGYVIWNL-------WNDGSLWDLMDPMLQ---TEASYP 206
                   K+  F   + +   G V+W +       +   S   ++  +++    +    
Sbjct: 200 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 259

Query: 207 ILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY 253
                  +   C++ N   RP+ LEI+S +  E+   P  ++ +F Y
Sbjct: 260 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM--EPGFREVSFYY 304

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 4e-18
 Identities = 44/266 (16%), Positives = 86/266 (32%), Gaps = 68/266 (25%)

Query: 41  ENKLGEGGFGP---GKLLN---GEQVAVKRLSSQSGQG--LEEFKNEMMLIAKLQDINLV 92
           + +LG G FG    G        + VAVK L +++      +E   E  ++ +L +  +V
Sbjct: 12  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--------LHGVF 144
           R+IG C E    +L+ E      L+ +L        +     + +          L    
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYLQ---QNRHVKDKNIIELVHQVSMGMKYLEESN 127

Query: 145 SIKSDVFSFGVLLLETLSSK-----------------------------------KNAHF 169
            +  D+ +  VLL+    +K                                       F
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187

Query: 170 YNTNSLTLLGYVIWNLWNDGSL-WDLMDP-----MLQTEASYPILKRYS----NVDLFCF 219
            + + +   G ++W  ++ G   +  M       ML+                ++   C+
Sbjct: 188 SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCW 247

Query: 220 RENATDRPTMLEIVSMLSN---EIVN 242
             +  +RP    +   L N   ++VN
Sbjct: 248 TYDVENRPGFAAVELRLRNYYYDVVN 273

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 79.4 bits (195), Expect = 4e-18
 Identities = 49/291 (16%), Positives = 99/291 (34%), Gaps = 75/291 (25%)

Query: 26  FSLASISAATDNFSME---------NKLGEGGFGP---GKLLNGEQ----VAVKRL-SSQ 68
           F+    + A   F+ E           +G G FG    G L    +    VA+K L S  
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 69  SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGR 128
           + +   +F +E  ++ +    N++ + G   +    ++I E M N SLD FL    N G+
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ--NDGQ 124

Query: 129 LGWGTRVRIYA--------LHGVFSIKSDVFSFGVLLLETLSSK---------------- 164
                 V +          L  +  +  D+ +  +L+   L  K                
Sbjct: 125 FTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184

Query: 165 ---------------------KNAHFYNTNSLTLLGYVIWNLWNDG----------SLWD 193
                                +   F + + +   G V+W + + G           + +
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 244

Query: 194 LMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP 244
            ++   +             + L C++++   RP   +IV+ L ++++  P
Sbjct: 245 AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL-DKMIRNP 294

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.9 bits (194), Expect = 7e-18
 Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 34  ATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGL-EEFKNEMMLIAKLQD 88
             D+F   ++LG G  G         +G  +A K +  +    +  +   E+ ++ +   
Sbjct: 4   KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 63

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
             +V   G     G   +  EHM   SLD  L      GR+      ++
Sbjct: 64  PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKV 109

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.9 bits (191), Expect = 2e-17
 Identities = 44/289 (15%), Positives = 85/289 (29%), Gaps = 84/289 (29%)

Query: 36  DNFSMENKLGEGGFG---------PGKLLNGEQVAVKRLSSQSGQG-LEEFKNEMMLIAK 85
           +N      LG G FG           K     QVAVK L  ++     E   +E+ ++ +
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 86  LQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANK------------------ 126
           L    N+V ++G C   G   LI+E+     L  +L     K                  
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 127 --GRLGWGTRVRIYA--------LHGVFSIKSDVFSFGVLLLE-------------TLSS 163
               L +   +            L     +  D+ +  VL+                + S
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 216

Query: 164 KKNAHFYNTNSLTL---------------------LGYVIWNLWNDGS-----------L 191
             N        L +                      G ++W +++ G             
Sbjct: 217 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF 276

Query: 192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI 240
           + L+    + +  +   +    +   C+  ++  RP+   + S L  ++
Sbjct: 277 YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 325

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.7 bits (191), Expect = 2e-17
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 10/110 (9%)

Query: 35  TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLS---SQSGQGLEEFKNEMMLIAKLQ 87
              FS   ++G G FG       + N E VA+K++S    QS +  ++   E+  + KL+
Sbjct: 14  EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
             N ++  GC + +    L+ E+    + D       +K  L       +
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV---HKKPLQEVEIAAV 120

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 77.4 bits (190), Expect = 4e-17
 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 6/106 (5%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
           D++ +  +LG G FG      +   G   A K + +      E  + E+  ++ L+   L
Sbjct: 26  DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 85

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           V +     +    ++IYE M    L   + D     ++     V  
Sbjct: 86  VNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEY 129

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 1e-16
 Identities = 18/107 (16%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 35  TDNFSMENKLGEGGFGP---GKLL-NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN 90
            D + +  +LG+G FG     +        A K + ++S + LE++  E+ ++A     N
Sbjct: 11  EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPN 70

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           +V+++     +    ++ E     ++D  + +   +  L       +
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQVV 115

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 8e-04
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 14/92 (15%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ 200
              +  K+DV+S G+ L+E    +     +  N + +L  +  +     +         +
Sbjct: 189 DRPYDYKADVWSLGITLIEMAEIEPP--HHELNPMRVLLKIAKSEPPTLAQPSRWSSNFK 246

Query: 201 TEASYPILKRYSNVDLFCFRENATDRPTMLEI 232
                  LK+       C  +N   R T  ++
Sbjct: 247 D-----FLKK-------CLEKNVDARWTTSQL 266

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 3e-16
 Identities = 41/262 (15%), Positives = 81/262 (30%), Gaps = 62/262 (23%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ----VAVKRLSSQSGQGL-EEFKNEMMLIAKLQ 87
           +   +   +GEG FG    G  ++ E     VA+K   + +   + E+F  E + + +  
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------YA 139
             ++V++IG   E  V  +I E      L  FL     K  L   + +            
Sbjct: 67  HPHIVKLIGVITENPV-WIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALAY 123

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSK-----------KNAHFYNTNSLTLLGYVIWNLWND 188
           L     +  D+ +  VL+      K            + ++  +     + ++     N 
Sbjct: 124 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 183

Query: 189 GSLWDLMD----------------PMLQTEASYPILKRYSNVDLF--------------- 217
                  D                   Q   +  ++ R  N +                 
Sbjct: 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 243

Query: 218 -CFRENATDRPTMLEIVSMLSN 238
            C+  + + RP   E+ + LS 
Sbjct: 244 KCWAYDPSRRPRFTELKAQLST 265

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 7e-16
 Identities = 20/115 (17%), Positives = 51/115 (44%), Gaps = 8/115 (6%)

Query: 27  SLASISAATDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMML 82
           S+ S+      ++   K+G+G  G       +  G++VA+++++ Q     E   NE+++
Sbjct: 11  SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70

Query: 83  IAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           + + ++ N+V  +   +      ++ E++   S    L D   +  +  G    +
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGS----LTDVVTETCMDEGQIAAV 121

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.6 bits (177), Expect = 1e-15
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 10/106 (9%)

Query: 27  SLASISAATDNFSMENKLGEGGFG---------PGKLLNGEQVAVKRLSSQSGQGLE-EF 76
            L S+    +N      +GEG FG                  VAVK L  ++   ++ +F
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 77  KNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD 122
           + E  L+A+  + N+V+++G C       L++E+M    L+ FL  
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS 109

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.2 bits (106), Expect = 3e-06
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 15/99 (15%)

Query: 138 YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP 197
              +  ++ +SDV+++GV+L E  S      +Y      ++ YV      DG++     P
Sbjct: 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQP-YYGMAHEEVIYYVR-----DGNILAC--P 264

Query: 198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSML 236
                  Y +++        C+ +   DRP+   I  +L
Sbjct: 265 ENCPLELYNLMRL-------CWSKLPADRPSFCSIHRIL 296

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 2e-15
 Identities = 42/258 (16%), Positives = 90/258 (34%), Gaps = 61/258 (23%)

Query: 41  ENKLGEGGFGP---GKLLN----GEQVAVKRLSSQSGQG-LEEFKNEMMLIAKLQDINLV 92
              +G G FG    G LL+        AVK L+  +  G + +F  E +++      N++
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91

Query: 93  RIIGCCVE-KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFS------ 145
            ++G C+  +G  +++  +M +  L  F+ +  +   +       +    G+        
Sbjct: 92  SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 151

Query: 146 IKSDVFSFGVLLLETLSSK--------------KNAHFYNTNSLTLLGYV---------- 181
           +  D+ +   +L E  + K               ++    T +   + ++          
Sbjct: 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKF 211

Query: 182 -----IWNL--------------WNDGSLWDLMDPMLQTEASYP---ILKRYSNVDLFCF 219
                +W+               + D + +D+   +LQ                V L C+
Sbjct: 212 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 271

Query: 220 RENATDRPTMLEIVSMLS 237
              A  RP+  E+VS +S
Sbjct: 272 HPKAEMRPSFSELVSRIS 289

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 2e-15
 Identities = 41/272 (15%), Positives = 89/272 (32%), Gaps = 70/272 (25%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ---VAVKRLS-SQSGQGLEEFKNEMMLIAKLQD 88
           ++   ++ +GEG FG     ++         A+KR+    S     +F  E+ ++ KL  
Sbjct: 10  NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 69

Query: 89  -INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL-------------FDPANKGRLGWGTR 134
             N++ ++G C  +G   L  E+ P+ +L  FL                +    L     
Sbjct: 70  HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 129

Query: 135 VRIY-----ALHGVFS---IKSDVFSFGVLLLET---------LSSKKNAHFYNTNSLTL 177
           +         +  +     I  D+ +  +L+ E          LS  +  +   T     
Sbjct: 130 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 189

Query: 178 LGYV---------------IWNLW-----------------NDGSLWDLMDPMLQTEASY 205
           + ++               +W+                       L++ +    + E   
Sbjct: 190 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL 249

Query: 206 PILKRYSNVDLFCFRENATDRPTMLEIVSMLS 237
                  ++   C+RE   +RP+  +I+  L+
Sbjct: 250 NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 2e-15
 Identities = 40/271 (14%), Positives = 86/271 (31%), Gaps = 65/271 (23%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQ-----VAVKRLSSQSGQG-LEEFKNEMMLIAKL 86
              + +  +G G FG    G L          VA+K L +   +    +F  E  ++ + 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 66

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA------- 139
              N++R+ G   +    ++I E+M N +LD FL +    G       V +         
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMK 124

Query: 140 ------------------LHGVFSIK-SD--------------------VFSFGVLLLET 160
                             ++     K SD                             E 
Sbjct: 125 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 184

Query: 161 LSSKKNAHFYNTNSLTLLGYVIWNL-------WNDGSLWDLMDPMLQTEASYPILKRYSN 213
           +S +K     +  S  ++ + +           ++  +   ++   +             
Sbjct: 185 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQ 244

Query: 214 VDLFCFRENATDRPTMLEIVSMLSNEIVNLP 244
           + + C+++    RP   +IVS+L ++++  P
Sbjct: 245 LMMQCWQQERARRPKFADIVSIL-DKLIRAP 274

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.8 bits (175), Expect = 2e-15
 Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 13/111 (11%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLV 92
               ++  +G+G FG    GK   GE+VAVK  SS+  +     + E+     L+  N++
Sbjct: 3   RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERS-WFREAEIYQTVMLRHENIL 60

Query: 93  RIIGCCVEKGVKI----LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
             I    +         L+ ++  + SL  +L    N+  +     +++  
Sbjct: 61  GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLAL 107

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 6e-09
 Identities = 18/108 (16%), Positives = 32/108 (29%), Gaps = 5/108 (4%)

Query: 136 RIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI----WNLWNDGSL 191
            I   H     ++D+++ G++  E          +    L     V              
Sbjct: 187 SINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC 246

Query: 192 WDLMDPML-QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSN 238
              + P +     S   L+  + +   C+  N   R T L I   LS 
Sbjct: 247 EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 72.0 bits (176), Expect = 2e-15
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 6/106 (5%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
           D + +  +LG G FG          G     K +++         KNE+ ++ +L    L
Sbjct: 29  DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 88

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           + +     +K   +LI E +    L   +   A   ++     +  
Sbjct: 89  INLHDAFEDKYEMVLILEFLSGGELFDRIA--AEDYKMSEAEVINY 132

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 8e-15
 Identities = 38/252 (15%), Positives = 78/252 (30%), Gaps = 56/252 (22%)

Query: 36  DNFSMENKLGEGGFGP---GKLL-NGEQVAVKRLS---SQSGQGLEEFKNEMMLIAKLQD 88
           ++F +   LG+G FG     +   +   +A+K L     +      + + E+ + + L+ 
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--------L 140
            N++R+ G   +     LI E+ P  ++   L       +                    
Sbjct: 66  PNILRLYGYFHDATRVYLILEYAPLGTVYRELQ---KLSKFDEQRTATYITELANALSYC 122

Query: 141 HGVFSIKSDVFSFGVLLLET---------LSSKKNAHFYNTNSLTL-------------- 177
           H    I  D+    +LL             S    +    T   TL              
Sbjct: 123 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 182

Query: 178 -------LGYVIWNL------WNDGSLWDLMDPMLQTEASYPILKRYSNVDLF--CFREN 222
                  LG + +        +   +  +    + + E ++P        DL     + N
Sbjct: 183 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 242

Query: 223 ATDRPTMLEIVS 234
            + RP + E++ 
Sbjct: 243 PSQRPMLREVLE 254

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 8e-15
 Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 8/109 (7%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLS-SQSGQGLEEFKNEMMLIAKLQDIN 90
           +++ +   LGEG +G  +L    +  E VAVK +   ++    E  K E+ +   L   N
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 64

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
           +V+  G   E  ++ L  E+     L   +        +      R + 
Sbjct: 65  VVKFYGHRREGNIQYLFLEYCSGGELFDRIE---PDIGMPEPDAQRFFH 110

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 17/109 (15%)

Query: 141 HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ 200
               +   DV+S G++L   L+ +    +   +                + W  +D    
Sbjct: 180 REFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 237

Query: 201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQS 249
                 +L +          EN + R T+ +I     +   N P  + +
Sbjct: 238 A-----LLHK-------ILVENPSARITIPDI---KKDRWYNKPLKKGA 271

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.1 bits (171), Expect = 9e-15
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 35  TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEE-FKNEMMLIAKLQDI 89
            D +   + LG G F    L       + VA+K ++ ++ +G E   +NE+ ++ K++  
Sbjct: 8   RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHP 67

Query: 90  NLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           N+V +       G   LI + +    L   +     KG        R+
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRI---VEKGFYTERDASRL 112

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 1e-14
 Identities = 29/246 (11%), Positives = 76/246 (30%), Gaps = 33/246 (13%)

Query: 35  TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQG-LEEFKNEMMLIAKLQDI 89
              ++  + +GEG +G        +N  +VA+K++S    Q   +    E+ ++ + +  
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE 66

Query: 90  NLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA--------LH 141
           N++ I        ++ +   ++    +   L+       L                  +H
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIH 126

Query: 142 GVFSIKSDVFSFGVLLLET-------------LSSKKNAHFYNTNSLTLLGY----VIWN 184
               +  D+    +LL  T                  +   + T  +    Y    ++ N
Sbjct: 127 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 186

Query: 185 LWNDGSLWDLMDP---MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV 241
                   D+      + +  ++ PI      +D           P+  ++  +++ +  
Sbjct: 187 SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKAR 246

Query: 242 NLPYPQ 247
           N     
Sbjct: 247 NYLLSL 252

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 2e-14
 Identities = 17/111 (15%), Positives = 33/111 (29%), Gaps = 10/111 (9%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLS---SQSGQGLEEFKNEMMLIAKLQD 88
           ++F     LGEG F       +L    + A+K L          +     E  ++++L  
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
              V++     +         +  N  L  ++      G           A
Sbjct: 68  PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---KIGSFDETCTRFYTA 115

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 2e-14
 Identities = 17/111 (15%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRL--SSQSGQGLEEFKNEMMLIAKLQDI 89
           +++ +   +G G +G      +  +G+ +  K L   S +    +   +E+ L+ +L+  
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 90  NLVRIIGCCVEKGVKI--LIYEHMPNKSLDYFLFD-PANKGRLGWGTRVRI 137
           N+VR     +++      ++ E+     L   +      +  L     +R+
Sbjct: 64  NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 114

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.002
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 16/96 (16%)

Query: 138 YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP 197
                 ++ KSD++S G LL E  +      F   +   L G +    +    +      
Sbjct: 185 QMNRMSYNEKSDIWSLGCLLYELCALMP--PFTAFSQKELAGKIREGKFRR--IPYRYSD 240

Query: 198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIV 233
            L       I+ R               RP++ EI+
Sbjct: 241 ELNE-----IITR-------MLNLKDYHRPSVEEIL 264

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.0 bits (165), Expect = 6e-14
 Identities = 48/286 (16%), Positives = 89/286 (31%), Gaps = 79/286 (27%)

Query: 36  DNFSMENKLGEGGFG-----------PGKLLNGEQVAVKRLSSQ-SGQGLEEFKNEMMLI 83
           D   +   LGEG FG             K     +VAVK L S  + + L +  +EM ++
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72

Query: 84  AKLQD-INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLF-------------DPANKGRL 129
             +    N++ ++G C + G   +I E+    +L  +L                  + +L
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 132

Query: 130 GWGTRVRI-----YALHGVFS---IKSDVFSFGVLLLE-------------TLSSKKNAH 168
                V         +  + S   I  D+ +  VL+ E              +       
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192

Query: 169 FYNTNSLTL---------------------LGYVIWNLWNDGS----------LWDLMDP 197
                 L +                      G ++W ++  G           L+ L+  
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 252

Query: 198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL 243
             + +           +   C+    + RPT  ++V  L + IV L
Sbjct: 253 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-DRIVAL 297

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (163), Expect = 9e-14
 Identities = 44/281 (15%), Positives = 75/281 (26%), Gaps = 78/281 (27%)

Query: 36  DNFSMENKLGEGGFG---------PGKLLNGEQVAVKRLSSQSGQG--LEEFKNEMMLIA 84
           D   +   LG G FG           K      VAVK L   +             +LI 
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 85  KLQDINLVRIIGCCVEKGVKILI-YEHMPNKSLDYFLF-------------DPANKGRLG 130
               +N+V ++G C + G  +++  E     +L  +L              +   K  L 
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 131 WGTRVRIYA--------LHGVFSIKSDVFSFGVLLLET-------------LSSKKNAHF 169
               +            L     I  D+ +  +LL E              +    +   
Sbjct: 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 192

Query: 170 YNTNSLTL---------------------LGYVIWNL-------WNDGSLWDLMDPMLQT 201
                L L                      G ++W +       +    + +     L+ 
Sbjct: 193 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 252

Query: 202 EASYPILKRYS----NVDLFCFRENATDRPTMLEIVSMLSN 238
                     +       L C+    + RPT  E+V  L N
Sbjct: 253 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 65.9 bits (160), Expect = 2e-13
 Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 14/116 (12%)

Query: 35  TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLS---SQSGQGLEEFKNEMMLIAKLQ 87
           +D + +   LG GG     L         VAVK L    ++       F+ E    A L 
Sbjct: 6   SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65

Query: 88  DINLVRIIGCCVEK----GVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
              +V +      +     +  ++ E++   +L   +     +G +     + + A
Sbjct: 66  HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTPKRAIEVIA 118

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.3 bits (161), Expect = 3e-13
 Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 14/116 (12%)

Query: 36  DNFSMENKLGEGGFGP---GKLL-NGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQD 88
           ++FS+   +G GGFG     +    G+  A+K L  +     QG     NE ++++ +  
Sbjct: 4   NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 63

Query: 89  I---NLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALH 141
                +V +            I + M    L Y L    ++  +     +R YA  
Sbjct: 64  GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAE 115

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 5e-13
 Identities = 51/291 (17%), Positives = 98/291 (33%), Gaps = 78/291 (26%)

Query: 36  DNFSMENKLGEGGFG--------PGKLLNGEQVAVKRLS-SQSGQGLEEFKNEMMLIAKL 86
             F     LG G FG        P        VA+K L  + S +  +E  +E  ++A +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68

Query: 87  QDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA------- 139
            + ++ R++G C+   V+ LI + MP   L  ++ +  +K  +G    +           
Sbjct: 69  DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVRE--HKDNIGSQYLLNWCVQIAKGMN 125

Query: 140 -LHGVFSIKSDVFSFGVLLLE-------------TLSSKKNAHFYNTNSLTL-------- 177
            L     +  D+ +  VL+                L +++  +      + +        
Sbjct: 126 YLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185

Query: 178 -------------LGYVIWNLWNDGSL-WDLMDP-----MLQTEASYPILKRYS----NV 214
                         G  +W L   GS  +D +       +L+     P     +     +
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 245

Query: 215 DLFCFRENATDRPTMLEIVSMLS--------------NEIVNLPYPQQSAF 251
            + C+  +A  RP   E++   S              +E ++LP P  S F
Sbjct: 246 MVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNF 296

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 63.8 bits (154), Expect = 1e-12
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 8/106 (7%)

Query: 36  DNFSMENKLGEGGFGP---GKLLNGEQVAVK--RLSSQSGQGLEEFKNEMMLIAKLQDIN 90
           + +    K+GEG +G     +   GE  A+K  RL  +          E+ ++ +L+  N
Sbjct: 2   EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 91  LVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVR 136
           +V++      K   +L++EH+              +G L   T   
Sbjct: 62  IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV---CEGGLESVTAKS 104

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 2e-12
 Identities = 14/108 (12%), Positives = 36/108 (33%), Gaps = 7/108 (6%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
           + + +   LG G FG      +  + +    K +  + G      K E+ ++   +  N+
Sbjct: 5   EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNI 63

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
           + +          ++I+E +    +   +    +   L     V    
Sbjct: 64  LHLHESFESMEELVMIFEFISGLDIFERINT--SAFELNEREIVSYVH 109

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.1 bits (153), Expect = 2e-12
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 13/107 (12%)

Query: 41  ENKLGEGGFGP---GKLL-NGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRI 94
           + ++G G F     G       +VA   L  +  +    + FK E  ++  LQ  N+VR 
Sbjct: 14  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRF 73

Query: 95  IGCCVE----KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
                     K   +L+ E M + +L  +L        +        
Sbjct: 74  YDSWESTVKGKKCIVLVTELMTSGTLKTYLK---RFKVMKIKVLRSW 117

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 14/95 (14%), Positives = 39/95 (41%), Gaps = 14/95 (14%)

Query: 140 LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPML 199
               +    DV++FG+ +LE  +S+    +    +   +   + +     S   +  P +
Sbjct: 185 YEEKYDESVDVYAFGMCMLEMATSEYP--YSECQNAAQIYRRVTSGVKPASFDKVAIPEV 242

Query: 200 QTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS 234
           +      I++        C R+N  +R ++ ++++
Sbjct: 243 KE-----IIEG-------CIRQNKDERYSIKDLLN 265

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 3e-12
 Identities = 23/112 (20%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 36  DNFSMENKLGEGGFGP---GKLL-NGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
            +++    +G G FG     KL  +GE VA+K++             E+ ++ KL   N+
Sbjct: 20  VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNI 75

Query: 92  VRIIGCCVEKGVK------ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           VR+       G K       L+ +++P             K  L        
Sbjct: 76  VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 6e-12
 Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 13/112 (11%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRL------SSQSGQGLEEFKNEMMLIAK 85
           D +    +LG G F   K       G Q A K +      SS+ G   E+ + E+ ++ +
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69

Query: 86  LQDINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           +Q  N++ +      K   ILI E +    L  FL     K  L        
Sbjct: 70  IQHPNVITLHEVYENKTDVILILELVAGGELFDFLA---EKESLTEEEATEF 118

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 8e-12
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 6/114 (5%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVK--RLSSQSGQGLEEFKNEMMLIAKLQDI 89
           +NF    K+GEG +G        L GE VA+K  RL +++         E+ L+ +L   
Sbjct: 2   ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 90  NLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGV 143
           N+V+++     +    L++E +      +          L          L G+
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 1e-11
 Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 11/112 (9%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLS---SQSGQGLEEFKNE-MMLIAKLQ 87
           ++F +   LG+G FG   L       +  A+K L          +E    E  +L    +
Sbjct: 2   EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 61

Query: 88  DINLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
              L  +      K     + E++    L Y +    +  +          A
Sbjct: 62  HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ---SCHKFDLSRATFYAA 110

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.5 bits (146), Expect = 2e-11
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLS---SQSGQGLEEFKNEMMLIAKLQD 88
            +F +   LG G FG   L     NG   A+K L        + +E   +E ++++ +  
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYF 119
             ++R+ G   +     +I +++    L   
Sbjct: 64  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSL 94

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 57.4 bits (138), Expect = 2e-10
 Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 17/116 (14%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGL---------EEFKNEMML 82
           +N+  +  LG G     +        ++ AVK +    G            E    E+ +
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 83  IAKLQDI-NLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           + K+    N++++           L+++ M    L  +L     K  L      +I
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKI 115

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 3e-10
 Identities = 40/272 (14%), Positives = 88/272 (32%), Gaps = 64/272 (23%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEE------FKNEMMLIAK 85
             + +   LG GGFG      ++ +   VA+K +         E         E++L+ K
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63

Query: 86  LQD--INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----Y 138
           +      ++R++         +LI E        +       +G L              
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLE 121

Query: 139 ALHGVFS---IKSDVFSFGVLLLETLSSKKNAHFYNTNSLTL------------------ 177
           A+    +   +  D+    +L+       K   F +   L                    
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 181

Query: 178 --------------LGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSN--VDLF--CF 219
                         LG +++++      ++  + +++ +  +   +R S+    L   C 
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR--QRVSSECQHLIRWCL 239

Query: 220 RENATDRPTMLEIVSMLSNE-IVNLPYPQQSA 250
               +DRPT  EI    ++  + ++  PQ++A
Sbjct: 240 ALRPSDRPTFEEI---QNHPWMQDVLLPQETA 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.2 bits (132), Expect = 1e-09
 Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 6/112 (5%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
           + + +  K+G G FG       +  GE+VA+K    ++     +   E  +   +Q    
Sbjct: 7   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVG 64

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGV 143
           +  I  C  +G   ++   +   SL+      + K  L     +    +  +
Sbjct: 65  IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRI 116

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 1e-04
 Identities = 14/114 (12%), Positives = 29/114 (25%), Gaps = 9/114 (7%)

Query: 138 YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP 197
             L    S + D+ S G +L+               +     Y   +     +  +++  
Sbjct: 184 THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-RQKYERISEKKMSTPIEVLCK 242

Query: 198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAF 251
              +E     L         C      D+P    +  +  N      +     F
Sbjct: 243 GYPSEF-ATYLNF-------CRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVF 288

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (131), Expect = 2e-09
 Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 12/107 (11%)

Query: 42  NKLGEGGFGP---GKLLN-GEQVAVKRLSSQSGQGLEE-----FKNEMMLIAKLQDINLV 92
           + LGEG F      +  N  + VA+K++        ++        E+ L+ +L   N++
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63

Query: 93  RIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
            ++     K    L+++ M             N   L          
Sbjct: 64  GLLDAFGHKSNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYML 107

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 9/108 (8%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINL 91
            ++ +  ++GEG FG       LLN +QVA+K    +S     + ++E      L     
Sbjct: 5   VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA--PQLRDEYRTYKLLAGCTG 62

Query: 92  VRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
           +  +    ++G+  ++   +   SL+  L      GR      V + A
Sbjct: 63  IPNVYYFGQEGLHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAA 107

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 7/92 (7%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQD 88
           ++F     LG+G FG   L      G   A+K L  +   +   +     E  ++   + 
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYFL 120
             L  +            + E+     L + L
Sbjct: 65  PFLTALKYAFQTHDRLCFVMEYANGGELFFHL 96

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.1 bits (129), Expect = 3e-09
 Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRL--SSQSGQGLEEFKNEMMLIAKLQDI 89
             +     +G G +G          G +VA+K+L    QS    +    E+ L+  ++  
Sbjct: 18  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77

Query: 90  NLVRIIGCCVEKGVKILIYE-HMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           N++ ++             + ++    +   L       +LG      +
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 126

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 4e-09
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 12/99 (12%)

Query: 36  DNFSMENKLGEGGFG-------PGKLLNGEQVAVKRLS----SQSGQGLEEFKNEMMLIA 84
           +NF +   LG G +G             G+  A+K L      Q  +  E  + E  ++ 
Sbjct: 24  ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83

Query: 85  KLQDI-NLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFD 122
            ++    LV +      +    LI +++    L   L  
Sbjct: 84  HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQ 122

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 5e-09
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 36  DNFSMENKLGEGGFGP---GKLL-NGEQVAVK--RLSSQSGQGLEEFKNEMMLIAKLQDI 89
             +    K+GEG +G     K     E VA+K  RL             E+ L+ +L+  
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61

Query: 90  NLVRIIGCCVEKGVKILIYEHMPNKSLDYF 119
           N+VR+           L++E        YF
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYF 91

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 5e-09
 Identities = 35/208 (16%), Positives = 71/208 (34%), Gaps = 33/208 (15%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRL--SSQSGQGLEEFKNEMMLIAKLQDI 89
             +    K+G+G FG          G++VA+K++   ++          E+ ++  L+  
Sbjct: 10  SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 90  NLVRIIGCCVE--------KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIY--- 138
           N+V +I  C          KG   L+++   +              +       R+    
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN---VLVKFTLSEIKRVMQML 126

Query: 139 --ALHGVFS---IKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND--GSL 191
              L+ +     +  D+ +  VL+       K A F    + +L      N + +   +L
Sbjct: 127 LNGLYYIHRNKILHRDMKAANVLITRD-GVLKLADFGLARAFSLAKNSQPNRYTNRVVTL 185

Query: 192 WDLMDPMLQTEASYPILKRYSNVDLFCF 219
           W     +L  E  Y        +DL+  
Sbjct: 186 WYRPPELLLGERDYG-----PPIDLWGA 208

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 6e-09
 Identities = 26/179 (14%), Positives = 53/179 (29%), Gaps = 18/179 (10%)

Query: 35  TDNFSMENKLGEGGFGP----GKLLNGEQVAVKRLS--SQSGQGLEEFKNEMMLIAKLQD 88
            + +   + +G G +G          G +VAVK+LS   QS    +    E+ L+  ++ 
Sbjct: 17  PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALHGVFSIKS 148
            N++ ++                  +  D +L        L    + +      V  +  
Sbjct: 77  ENVIGLLDVFTPA--------RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128

Query: 149 DVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI 207
            +       L+ + S    H     S   +         D  L    D  +    +   
Sbjct: 129 QILRG----LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW 183

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 52.9 bits (126), Expect = 7e-09
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 12/144 (8%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQD-IN 90
           D++ +  KLG G +        + N E+V VK L        ++ K E+ ++  L+   N
Sbjct: 35  DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPN 91

Query: 91  LVRIIGCCVE--KGVKILIYEHMPNKSLDYFL--FDPANKGRLGWGTRVRIYALHGVFSI 146
           ++ +     +       L++EH+ N             +     +     +   H +  +
Sbjct: 92  IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIM 151

Query: 147 KSDVFSFGVLLLETLSSKKNAHFY 170
             DV    V++       +   + 
Sbjct: 152 HRDVKPHNVMIDHEHRKLRLIDWG 175

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 10/111 (9%)

Query: 36  DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQD 88
           D F     LG G FG   L     +G   A+K L  Q     + +E   NE  ++  +  
Sbjct: 41  DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 89  INLVRIIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYA 139
             LV++     +     ++ E++    +   L      GR          A
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAA 148

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 4e-08
 Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 15/125 (12%)

Query: 34  ATDNFSMENKLGEGGFGP-----GKLLNGEQVAVKRLSSQSGQG--LEEFKNEMMLIAKL 86
           A   +    ++GEG +G           G  VA+KR+  Q+G+         E+ ++  L
Sbjct: 5   ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 64

Query: 87  QDI---NLVRIIGCCVEKGVK-----ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIY 138
           +     N+VR+   C            L++EH+      Y    P           +   
Sbjct: 65  ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 124

Query: 139 ALHGV 143
            L G+
Sbjct: 125 LLRGL 129

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 0.001
 Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 20/146 (13%)

Query: 105 ILIYEHMPNKSLDYFL---FDPANKGRLGWGTRVRI---YALHGVFSIKSDVFSFGVLLL 158
           IL+      K  D+ L   +           T         L   ++   D++S G +  
Sbjct: 147 ILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFA 206

Query: 159 ETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSL-----WDLMDPMLQTEASYPILKRYSN 213
           E    K    F  ++ +  LG ++  +   G         L      ++++ PI K  ++
Sbjct: 207 EMFRRK--PLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTD 264

Query: 214 VDLF-------CFRENATDRPTMLEI 232
           +D         C   N   R +    
Sbjct: 265 IDELGKDLLLKCLTFNPAKRISAYSA 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.1 bits (113), Expect = 3e-07
 Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 38  FSMENKLGEGGFGP----GKLLNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVR 93
           + +  KLG G F        ++N   VA+K +        E  ++E+ L+ ++ D +  +
Sbjct: 15  YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY-TEAAEDEIKLLQRVNDADNTK 73

Query: 94  IIGCCVEKGVKILIYEHMPNKSLDYFLFDPANKG 127
                    +K+L + +    +  + +      G
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLG 107

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.6 bits (112), Expect = 4e-07
 Identities = 15/96 (15%), Positives = 32/96 (33%), Gaps = 12/96 (12%)

Query: 36  DNFSMENKLGEGGFGP----GKLLNGEQVAVKRLS--SQSGQGLEEFKNEMMLIAKLQDI 89
             +     +G G  G        +    VA+K+LS   Q+    +    E++L+  +   
Sbjct: 17  KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76

Query: 90  NLVRIIGCCVEKGVK------ILIYEHMPNKSLDYF 119
           N++ ++     +          L+ E M        
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI 112

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 9e-07
 Identities = 18/112 (16%), Positives = 40/112 (35%), Gaps = 16/112 (14%)

Query: 36  DNFSMENK-LGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQD-I 89
           D++ + ++ LG G  G           E+ A+K L         + + E+ L  +     
Sbjct: 11  DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCP 65

Query: 90  NLVRIIGCC----VEKGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI 137
           ++VRI+         +   +++ E +    L   + D  ++          I
Sbjct: 66  HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQ-AFTEREASEI 116

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 19/136 (13%), Positives = 43/136 (31%), Gaps = 19/136 (13%)

Query: 39  SMENKLGEGGFGP---GKLLNGEQVAVK--RLSSQSGQ--------GLEEFKNEMMLIAK 85
           ++   +GEG              +  VK  ++   S +        G   F    +  A+
Sbjct: 3   AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSAR 62

Query: 86  LQDINLVRIIGCCVEKGV----KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRIYALH 141
            +   L ++ G  V K        ++ E +  K  + +     N   +       +   +
Sbjct: 63  NEFRALQKLQGLAVPKVYAWEGNAVLMELIDAK--ELYRVRVENPDEVLDMILEEVAKFY 120

Query: 142 GVFSIKSDVFSFGVLL 157
               +  D+  + VL+
Sbjct: 121 HRGIVHGDLSQYNVLV 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	253
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.98
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.98
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.98
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.97
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.97
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.96
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.95
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.95
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.95
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.95
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.95
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.95
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.95
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.95
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.95
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.89
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.43
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	95.24

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.8e-38  Score=253.17  Aligned_cols=200  Identities=23%  Similarity=0.283  Sum_probs=148.9

Q ss_pred             cHHHHHHHhcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecC
Q 043709           27 SLASISAATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG  102 (253)
Q Consensus        27 ~~~~l~~~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~  102 (253)
                      ++++|+...++|++.+.||+|+||+|++    .+++.||||+++.+ ....++|.+|+.+|+.++|||||+++|++.+.+
T Consensus         8 ~~~~wei~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (287)
T d1opja_           8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP   86 (287)
T ss_dssp             TCCTTBCCGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CCcccEecHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCC
Confidence            3445666678899999999999999665    46889999999754 345678999999999999999999999999999


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------  137 (253)
                      ..+++||||++|+|.+++..... ..+++.....+                                             
T Consensus        87 ~~~iv~E~~~~g~l~~~l~~~~~-~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~  165 (287)
T d1opja_          87 PFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM  165 (287)
T ss_dssp             SCEEEEECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTC
T ss_pred             eeEEEeecccCcchHHHhhhccc-cchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeec
Confidence            99999999999999999843221 12233222221                                             


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                           .+..+.|+.++|||||||++|||++++.|+...... ..+...+              .
T Consensus       166 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~-~~~~~~i--------------~  230 (287)
T d1opja_         166 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELL--------------E  230 (287)
T ss_dssp             CSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHH--------------H
T ss_pred             CCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH-HHHHHHH--------------h
Confidence                                 234566899999999999999999988876543321 1111111              1


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCC
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNL  243 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~  243 (253)
                      ...+...+..++..+.+|+.+||+.||++|||+++|++.|+.+....
T Consensus       231 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~~  277 (287)
T d1opja_         231 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  277 (287)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSSS
T ss_pred             cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhC
Confidence            11112222334567889999999999999999999999999887543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-38  Score=247.46  Aligned_cols=200  Identities=20%  Similarity=0.281  Sum_probs=144.6

Q ss_pred             HHHHhcCccccCccccccccceEee-CCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL-NGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      |+...++|++.+.||+|+||++++. .+..||||+++..  +....+.|.+|+.+|++++|||||+++|++.+ +.+++|
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv   81 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIV   81 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEE
Confidence            4445678999999999999997763 4557999999754  45566789999999999999999999998754 568999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||||++|+|.+++.....  .+++.....+                                                  
T Consensus        82 ~Ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~  159 (276)
T d1uwha_          82 TQWCEGSSLYHHLHIIET--KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG  159 (276)
T ss_dssp             EECCCEEEHHHHHHTSCC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------
T ss_pred             EecCCCCCHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCC
Confidence            999999999999853221  2233222222                                                  


Q ss_pred             -----------------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -----------------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -----------------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                       .+   ....|+.++|||||||++|||+||+.||....... .+...+ .........      
T Consensus       160 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~-~~~~~~-~~~~~~p~~------  231 (276)
T d1uwha_         160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIFMV-GRGYLSPDL------  231 (276)
T ss_dssp             ------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHH-HHTSCCCCG------
T ss_pred             cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH-HHHHHH-hcCCCCCcc------
Confidence                             11   12347889999999999999999999986443211 111111 111100000      


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                         ......++..+.+++.+||+.||++|||+++|++.|+.+.+++|
T Consensus       232 ---~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~P  275 (276)
T d1uwha_         232 ---SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSLP  275 (276)
T ss_dssp             ---GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             ---hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcCC
Confidence               11122344678889999999999999999999999999988766

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-37  Score=244.02  Aligned_cols=188  Identities=24%  Similarity=0.368  Sum_probs=139.8

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      ++|++.+.||+|+||.+++   .+++.||||+++.. ....++|.+|+.+++.++|||||+++|++...+..++|||||+
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            5799999999999999665   45778999999754 3445789999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|.+++.....  .+.+.....+                                                       
T Consensus        84 ~g~L~~~l~~~~~--~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~  161 (263)
T d1sm2a_          84 HGCLSDYLRTQRG--LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG  161 (263)
T ss_dssp             TCBHHHHHHTTTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred             CCcHHHHhhcccc--CCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence            9999999854321  1223222222                                                       


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 .+....|+.++|||||||++|||+|++.|+..... ...+...+..    .          .+...+..
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~~~~~~~i~~----~----------~~~~~p~~  226 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-NSEVVEDIST----G----------FRLYKPRL  226 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-HHHHHHHHHH----T----------CCCCCCTT
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-HHHHHHHHHh----c----------CCCCCccc
Confidence                       23445689999999999999999997666543322 2222222211    0          01111122


Q ss_pred             HHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          207 ILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      .+..+.+++.+||+.||++|||+++|++.|+++.+
T Consensus       227 ~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            34567889999999999999999999999998764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.3e-37  Score=239.44  Aligned_cols=185  Identities=25%  Similarity=0.362  Sum_probs=137.1

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCC
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMP  112 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~  112 (253)
                      ++|++.+.||+|+||+|++   .++..||||+++... ...+.|.+|+.+++.++||||++++|++.+++.+++||||+.
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            6899999999999999665   456789999998643 345789999999999999999999999999999999999999


Q ss_pred             CCChhhhccCCCCcCCCCccceeee-------------------------------------------------------
Q 043709          113 NKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------------  137 (253)
Q Consensus       113 ~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------------  137 (253)
                      +|+|..++.....  .+.+..+..+                                                       
T Consensus        83 ~g~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  160 (258)
T d1k2pa_          83 NGCLLNYLREMRH--RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG  160 (258)
T ss_dssp             TEEHHHHHHSGGG--CCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred             CCcHHHhhhcccc--CCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence            9999988632211  1111111111                                                       


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                 .+....|+.++|||||||++|||+| |+.||.....  .++...+    . .+         .+...+.
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~--~~~~~~i----~-~~---------~~~~~p~  224 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--SETAEHI----A-QG---------LRLYRPH  224 (258)
T ss_dssp             SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHH----H-TT---------CCCCCCT
T ss_pred             cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCH--HHHHHHH----H-hC---------CCCCCcc
Confidence                       2344568899999999999999998 6878764432  2222222    1 11         1111112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                      ..+..+.+++.+||+.||++|||+++|++.|.++
T Consensus       225 ~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         225 LASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            3335788899999999999999999999998764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.6e-37  Score=244.43  Aligned_cols=189  Identities=23%  Similarity=0.325  Sum_probs=139.5

Q ss_pred             cCccccCccccccccceEee----CC---CEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKLL----NG---EQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~----~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ++|++.+.||+|+||+|++.    ++   ..||||.+... .....+.|.+|+.+|++++|||||+++|++...+.+++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            46778899999999996652    22   35899998754 445567899999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||||++|+|.+++....  ..+++.....+                                                  
T Consensus       106 ~Ey~~~g~L~~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  183 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  183 (299)
T ss_dssp             EECCTTEEHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EEecCCCcceeeecccc--CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCC
Confidence            99999999999885422  12333322222                                                  


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                          ....+.|+.++|||||||++|||+| |..||.....  ..+...+    . .        
T Consensus       184 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~--~~~~~~i----~-~--------  248 (299)
T d1jpaa_         184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN--QDVINAI----E-Q--------  248 (299)
T ss_dssp             ------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH----H-T--------
T ss_pred             cceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCH--HHHHHHH----H-c--------
Confidence                                1234568889999999999999998 7888764322  2222222    1 1        


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                       ..+...+..++..+.+++.+||+.||++|||+.+|++.|+.++++
T Consensus       249 -~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         249 -DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             -TCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -CCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence             111122233456788899999999999999999999999998754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-37  Score=244.27  Aligned_cols=194  Identities=27%  Similarity=0.346  Sum_probs=139.6

Q ss_pred             HHHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      +|....++|++.+.||+|+||.|++   .+++.||||+++.. ....+.|.+|+.++++++|||||+++|++.+ +.+++
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~i   84 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI   84 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEE
Confidence            3445667899999999999999665   45678999999754 3445789999999999999999999998754 56799


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |||||++|+|.+++..... ..+++.....+                                                 
T Consensus        85 v~Ey~~~g~L~~~~~~~~~-~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             EEEeCCCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCc
Confidence            9999999999987732111 11222222211                                                 


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                       .+..+.|+.++|||||||++|||+|++.|+...... ..+...+    .. +         .+
T Consensus       164 ~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-~~~~~~i----~~-~---------~~  228 (272)
T d1qpca_         164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-PEVIQNL----ER-G---------YR  228 (272)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHH----HT-T---------CC
T ss_pred             cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-HHHHHHH----Hh-c---------CC
Confidence                             233456889999999999999999987776543221 1122111    11 1         11


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ...+..++..+.+++.+||+.||++|||+++|++.|+++..
T Consensus       229 ~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            11122334578889999999999999999999999998763

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-36  Score=235.61  Aligned_cols=182  Identities=19%  Similarity=0.175  Sum_probs=131.3

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++++.||+|+||++++    .+++.||||+++.. ..+..+.+.+|+.+|+.++|||||++++++.+.+.+++||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            5799999999999999654    56899999999764 234456799999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      |++|+|.+++....   .++......+                                                     
T Consensus        85 ~~gg~L~~~l~~~~---~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~  161 (271)
T d1nvra_          85 CSGGELFDRIEPDI---GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  161 (271)
T ss_dssp             CTTEEGGGGSBTTT---BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence            99999999984322   1222211111                                                     


Q ss_pred             --------------eeecCc-cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 --------------YALHGV-FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 --------------~~~~~~-~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                    .+.... ++.++||||+||++|||++|..||..............     ...         ....
T Consensus       162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~-----~~~---------~~~~  227 (271)
T d1nvra_         162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK-----EKK---------TYLN  227 (271)
T ss_dssp             BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHH-----TTC---------TTST
T ss_pred             ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHh-----cCC---------CCCC
Confidence                          122333 46789999999999999999999975443322221111     000         0011


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+..+.+|+.+||+.||++|||++|+++
T Consensus       228 ~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         228 PWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            11233456788999999999999999999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-36  Score=240.09  Aligned_cols=188  Identities=23%  Similarity=0.343  Sum_probs=137.1

Q ss_pred             hcCccccCc-cccccccceEee------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           35 TDNFSMENK-LGEGGFGPGKLL------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~-ig~G~fg~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .++|.+.+. ||+|+||.|++.      ++..||||+++.. .....+.|.+|+.+|++++|||||+++|++.+ +.+++
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l   85 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML   85 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence            456777774 999999996652      3447999999755 44556789999999999999999999999865 56899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |||||++|+|.+++....  ..+++.....+                                                 
T Consensus        86 vmE~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  163 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD  163 (285)
T ss_dssp             EEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred             EEEeCCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccc
Confidence            999999999999874322  12333322222                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         .+..+.++.++|||||||++|||+| |..||.....  .++...+     ..+.       
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~--~~~~~~i-----~~~~-------  229 (285)
T d1u59a_         164 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFI-----EQGK-------  229 (285)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHH-----HTTC-------
T ss_pred             cccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCH--HHHHHHH-----HcCC-------
Confidence                               2234568899999999999999998 8888864332  2222222     1111       


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                        +.+.+..++..+.+++.+||+.||++|||+.+|++.|+....
T Consensus       230 --~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~  271 (285)
T d1u59a_         230 --RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY  271 (285)
T ss_dssp             --CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --CCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence              112223344678889999999999999999999999987653

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-35  Score=237.20  Aligned_cols=182  Identities=15%  Similarity=0.256  Sum_probs=136.4

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||+|++    .+|+.||||++........+.+.+|+.+|+.++|||||++++++.+.+.+++||||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            34799999999999999665    56899999999876666678899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      |++|+|.+++.+..    ++......+                                                     
T Consensus        99 ~~gg~L~~~~~~~~----l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~  174 (293)
T d1yhwa1          99 LAGGSLTDVVTETC----MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  174 (293)
T ss_dssp             CTTCBHHHHHHHSC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             cCCCcHHHHhhccC----CCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccccccc
Confidence            99999998873211    111110000                                                     


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  .+.+..|+.++||||+||++|||++|..||......  ......    .....        .....+.
T Consensus       175 ~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~~----~~~~~--------~~~~~~~  240 (293)
T d1yhwa1         175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALYLI----ATNGT--------PELQNPE  240 (293)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH----HHHCS--------CCCSSGG
T ss_pred             ccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH--HHHHHH----HhCCC--------CCCCCcc
Confidence                        334566899999999999999999999998643321  111111    00000        0011122


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+++.+||+.||++|||++|+++
T Consensus       241 ~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             GSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            34567888999999999999999999985

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=242.04  Aligned_cols=201  Identities=26%  Similarity=0.313  Sum_probs=145.2

Q ss_pred             HHHHhcCccccCccccccccceEe---eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      |.+..++|++.+.||+|+||++++   ..++.||||+++.. ....+.|.+|+.+|+.++|||||+++|++. .+..++|
T Consensus        12 ~~i~~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv   89 (285)
T d1fmka3          12 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIV   89 (285)
T ss_dssp             SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred             eEcCHHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEE
Confidence            334457899999999999999665   34568999999754 344578999999999999999999999985 4568999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||||++|+|..++.... ...+++.....+                                                  
T Consensus        90 ~Ey~~~g~l~~~~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~  168 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  168 (285)
T ss_dssp             ECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             EEecCCCchhhhhhhcc-cccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCc
Confidence            99999999998873211 111233322222                                                  


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      ....+.++.++|||||||++|||++|+.|+...... .++...+    . .+         .+.
T Consensus       169 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-~~~~~~i----~-~~---------~~~  233 (285)
T d1fmka3         169 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-REVLDQV----E-RG---------YRM  233 (285)
T ss_dssp             -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-HHHHHHH----H-TT---------CCC
T ss_pred             eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-HHHHHHH----H-hc---------CCC
Confidence                            234466889999999999999999988776544332 2222222    1 11         111


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCC
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQS  249 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~  249 (253)
                      +.+..++..+.+++.+||+.||++|||+++|++.|++......-+.+|
T Consensus       234 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p  281 (285)
T d1fmka3         234 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQP  281 (285)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCC
T ss_pred             CCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCC
Confidence            222234467889999999999999999999999999988666544333

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-37  Score=241.45  Aligned_cols=188  Identities=27%  Similarity=0.349  Sum_probs=136.1

Q ss_pred             HhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEe-cCeeEEEEee
Q 043709           34 ATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-KGVKILIYEH  110 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-~~~~~lv~e~  110 (253)
                      ..++|++++.||+|+||.+++  .+++.||||+++.+  ...+.+.+|+.++++++||||++++|++.+ .+.+++||||
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            346789999999999999654  57889999999753  455789999999999999999999999965 4668999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +++|+|.+++.... ...+++.....+                                                     
T Consensus        83 ~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~  161 (262)
T d1byga_          83 MAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  161 (262)
T ss_dssp             CTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             cCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence            99999999984311 111222222222                                                     


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhC-CCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSS-KKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                               ....+.++.++|||||||++|||+|+ +.||....  ...+...+     ..         ..+.+.+...
T Consensus       162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~--~~~~~~~i-----~~---------~~~~~~~~~~  225 (262)
T d1byga_         162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRV-----EK---------GYKMDAPDGC  225 (262)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--GGGHHHHH-----TT---------TCCCCCCTTC
T ss_pred             ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCC--HHHHHHHH-----Hc---------CCCCCCCccC
Confidence                     23456789999999999999999984 55554322  22222222     11         1122223334


Q ss_pred             HHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          208 LKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      +..+.+++.+||+.||.+|||+.+|++.|+.+.
T Consensus       226 ~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         226 PPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            467888999999999999999999999998875

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=236.56  Aligned_cols=184  Identities=17%  Similarity=0.244  Sum_probs=136.8

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .+.|++++.||+|+||+|++    .+++.||||++........+.+.+|+.+|++++|||||++++++.+.+.+++||||
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            35689999999999999655    56889999999877667778899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      |++|+|.+++.+...  .++......+                                                     
T Consensus        91 ~~~g~L~~~~~~~~~--~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~  168 (288)
T d2jfla1          91 CAGGAVDAVMLELER--PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD  168 (288)
T ss_dssp             CTTEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHT
T ss_pred             CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCccccc
Confidence            999999998732111  1121111111                                                     


Q ss_pred             ------------ee-----ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCC
Q 043709          138 ------------YA-----LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQ  200 (253)
Q Consensus       138 ------------~~-----~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  200 (253)
                                  .+     ....|+.++|||||||++|||++|..||.....  ......+    .. .....       
T Consensus       169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~--~~~~~~i----~~-~~~~~-------  234 (288)
T d2jfla1         169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP--MRVLLKI----AK-SEPPT-------  234 (288)
T ss_dssp             CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG--GGHHHHH----HH-SCCCC-------
T ss_pred             ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH--HHHHHHH----Hc-CCCCC-------
Confidence                        11     244588999999999999999999999865432  1222111    10 11101       


Q ss_pred             CCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          201 TEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       201 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+...+..+.+|+.+||+.||++|||++|+++
T Consensus       235 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1112234567888999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=239.25  Aligned_cols=194  Identities=23%  Similarity=0.358  Sum_probs=138.2

Q ss_pred             cCccccCccccccccceEe----eCCC--EEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGE--QVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ++|++.+.||+|+||.+++    .++.  .||||+++.. ..+..+.+.+|+.+|+.+ +|||||+++|++.+.+.+++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            6899999999999999655    3444  5788888644 445567899999999998 799999999999999999999


Q ss_pred             EeeCCCCChhhhccCCC-------------CcCCCCccceeee-------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPA-------------NKGRLGWGTRVRI-------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~~~i-------------------------------------  137 (253)
                      ||||++|+|.++++...             ....+++.....+                                     
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~  169 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  169 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEc
Confidence            99999999999985431             1112222222211                                     


Q ss_pred             ---------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC
Q 043709          138 ---------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS  190 (253)
Q Consensus       138 ---------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  190 (253)
                                                 .+..+.|+.++|||||||++|||++|..|+... .+...+...+    . .  
T Consensus       170 DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~-~~~~~~~~~i----~-~--  241 (309)
T d1fvra_         170 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKL----P-Q--  241 (309)
T ss_dssp             CTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT-CCHHHHHHHG----G-G--
T ss_pred             cccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCC-CCHHHHHHHH----H-h--
Confidence                                       234456889999999999999999987653322 1222222211    1 1  


Q ss_pred             ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCC
Q 043709          191 LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLP  244 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~  244 (253)
                             ..+.+.+..++..+.+|+.+||+.||++|||+++|++.|+.+.+...
T Consensus       242 -------~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~  288 (309)
T d1fvra_         242 -------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  288 (309)
T ss_dssp             -------TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred             -------cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCc
Confidence                   11122223345678899999999999999999999999999885543

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-35  Score=231.94  Aligned_cols=179  Identities=18%  Similarity=0.197  Sum_probs=133.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++.+.||+|+||.+++    .+++.||+|++...   .....+.+.+|+.+++.++|||||++++++.+.+.+++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            5799999999999999655    57889999999743   3445678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      |||++|+|.+++....   .+++.....+                                                   
T Consensus        86 Ey~~~g~L~~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          86 EYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             ECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred             eecCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence            9999999999883211   1111111111                                                   


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  .+.+..|+.++|||||||++|||++|..||.....  ..+...+    . ....          ..+.
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i----~-~~~~----------~~p~  225 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--QETYKRI----S-RVEF----------TFPD  225 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHH----H-TTCC----------CCCT
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH--HHHHHHH----H-cCCC----------CCCc
Confidence                        23445689999999999999999999999864322  1111111    1 1110          1112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+++.+||+.||++|||++|+++
T Consensus       226 ~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         226 FVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            23457888999999999999999999985

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.6e-36  Score=239.09  Aligned_cols=199  Identities=25%  Similarity=0.374  Sum_probs=144.8

Q ss_pred             cHHHHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeE
Q 043709           27 SLASISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIG   96 (253)
Q Consensus        27 ~~~~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~   96 (253)
                      .+.+|+.++++|++.+.||+|+||++++.         +++.||||+++.. ..+..++|.+|+.+|+.++||||+++++
T Consensus         4 ~~~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~   83 (301)
T d1lufa_           4 KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLG   83 (301)
T ss_dssp             HHHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             chhhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCccccee
Confidence            35567778889999999999999996653         3468999999765 3344678999999999999999999999


Q ss_pred             EEEecCeeEEEEeeCCCCChhhhccCCCCcC---------------------CCCccceeee------------------
Q 043709           97 CCVEKGVKILIYEHMPNKSLDYFLFDPANKG---------------------RLGWGTRVRI------------------  137 (253)
Q Consensus        97 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~---------------------~~~~~~~~~i------------------  137 (253)
                      ++...+..+++|||+++|+|.+++.......                     .+.+.....+                  
T Consensus        84 ~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivH  163 (301)
T d1lufa_          84 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  163 (301)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEe
Confidence            9999999999999999999999985322110                     0111111111                  


Q ss_pred             -------------------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcC
Q 043709          138 -------------------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAH  168 (253)
Q Consensus       138 -------------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~  168 (253)
                                                                       ......|+.++|||||||++|||+++..|+.
T Consensus       164 rDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~  243 (301)
T d1lufa_         164 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  243 (301)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             eEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCC
Confidence                                                             2234458899999999999999999975433


Q ss_pred             cCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          169 FYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ... ...++...+     ..+...         ..+..++..+.+|+.+||+.+|++||||.+|++.|+.+.
T Consensus       244 ~~~-~~~e~~~~v-----~~~~~~---------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         244 YGM-AHEEVIYYV-----RDGNIL---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TTS-CHHHHHHHH-----HTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCC-CHHHHHHHH-----HcCCCC---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            222 222222222     111111         112233457888999999999999999999999999875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-36  Score=242.24  Aligned_cols=192  Identities=23%  Similarity=0.364  Sum_probs=137.7

Q ss_pred             HHHHhcCccccCccccccccceEee----CC-----CEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL----NG-----EQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCCV   99 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~----~~-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~   99 (253)
                      |....++|++.+.||+|+||+|++.    .+     ..||+|.+... .......+.+|+.+|+++ +|||||++++++.
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~  111 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  111 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe
Confidence            4456688999999999999996652    22     26999998754 445567899999999998 8999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCCCc--------------------CCCCccceeee----------------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPANK--------------------GRLGWGTRVRI----------------------  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~~~--------------------~~~~~~~~~~i----------------------  137 (253)
                      +.+.+++|||||++|+|.++++.....                    ..+++.....+                      
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            999999999999999999999653321                    11122211111                      


Q ss_pred             ---------------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCC
Q 043709          138 ---------------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYN  171 (253)
Q Consensus       138 ---------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~  171 (253)
                                                                   .+..+.|+.++|||||||++|||+| |..||....
T Consensus       192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~  271 (325)
T d1rjba_         192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  271 (325)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence                                                         2344568899999999999999998 788876443


Q ss_pred             CCCcchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHh
Q 043709          172 TNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLS  237 (253)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~  237 (253)
                      ... .+...+              ....+.+.+..++..+.+|+.+||+.||++|||+++|++.|.
T Consensus       272 ~~~-~~~~~~--------------~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         272 VDA-NFYKLI--------------QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CSH-HHHHHH--------------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHH-HHHHHH--------------hcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            321 111111              111112222334567889999999999999999999999985

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-36  Score=236.09  Aligned_cols=179  Identities=24%  Similarity=0.311  Sum_probs=128.3

Q ss_pred             CccccccccceEee------CCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeCCC
Q 043709           42 NKLGEGGFGPGKLL------NGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHMPN  113 (253)
Q Consensus        42 ~~ig~G~fg~~~~~------~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~~~  113 (253)
                      +.||+|+||+|++.      +++.||||+++..  ++...+.|.+|+.+|++++|||||+++|+|.+ +..++|||||++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            36999999996652      3467999999754  34446789999999999999999999999865 567899999999


Q ss_pred             CChhhhccCCCCcCCCCccceeee--------------------------------------------------------
Q 043709          114 KSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------------  137 (253)
Q Consensus       114 g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------------  137 (253)
                      |+|.++++...   .+++.....+                                                        
T Consensus        92 g~L~~~l~~~~---~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~  168 (277)
T d1xbba_          92 GPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT  168 (277)
T ss_dssp             EEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred             CcHHHHHhhcc---CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence            99999984322   1222222221                                                        


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                  .+....|+.++|||||||++|||++ |..||.....  .++...+     ..+.         +.+.+
T Consensus       169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~--~~~~~~i-----~~~~---------~~~~p  232 (277)
T d1xbba_         169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAML-----EKGE---------RMGCP  232 (277)
T ss_dssp             --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH-----HTTC---------CCCCC
T ss_pred             ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCH--HHHHHHH-----HcCC---------CCCCC
Confidence                        2234558899999999999999998 7888864322  1222111     1111         11222


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      ..++..+.+|+.+||+.||++|||+++|++.|+...
T Consensus       233 ~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~  268 (277)
T d1xbba_         233 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  268 (277)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHH
Confidence            234467888999999999999999999999888754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-36  Score=237.00  Aligned_cols=184  Identities=17%  Similarity=0.269  Sum_probs=131.7

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe--cCeeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--KGVKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--~~~~~l  106 (253)
                      .++|++.+.||+|+||++++    .+|+.||||++...  .....+.+.+|+.+|++++|||||++++++.+  .+.+|+
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            46899999999999999555    56899999999765  34456779999999999999999999999865  456899


Q ss_pred             EEeeCCCCChhhhccCCCC-cCCCCccceeee------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPAN-KGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~i------------------------------------------------  137 (253)
                      |||||++|+|.+++..... ...+++.....+                                                
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence            9999999999988732110 001111111000                                                


Q ss_pred             ----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                            .+....|+.++|||||||++|||++|..||.....  ..+...+     ..+....  
T Consensus       163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~--~~~~~~i-----~~~~~~~--  233 (269)
T d2java1         163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKI-----REGKFRR--  233 (269)
T ss_dssp             HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH-----HHTCCCC--
T ss_pred             ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH--HHHHHHH-----HcCCCCC--
Confidence                                  23455689999999999999999999999864322  2222211     1111111  


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                             .+...+..+.+++.+||+.||.+|||++|+++
T Consensus       234 -------~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         234 -------IPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             -------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -------CCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                   11223457888999999999999999999975

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.6e-35  Score=235.22  Aligned_cols=184  Identities=16%  Similarity=0.154  Sum_probs=130.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccc-cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS-GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .+.|++.+.||+|+||+|++    .+++.||||++.... ....+.+.+|+.+|+.++|||||++++++.+++.+|+|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            45699999999999999665    468999999997652 3334668899999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccce---------------------------------------eee-------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTR---------------------------------------VRI-------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~---------------------------------------~~i-------------  137 (253)
                      ||++|+|.+++....   .++....                                       +.+             
T Consensus        88 ~~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~  164 (307)
T d1a06a_          88 LVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS  164 (307)
T ss_dssp             CCCSCBHHHHHHTCS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred             ccCCCcHHHhhhccc---CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence            999999999884321   1111110                                       111             


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     .+.+..|+.++|||||||++|||++|..||.....  ..+...+    .. ...      .....
T Consensus       165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~~~i----~~-~~~------~~~~~  231 (307)
T d1a06a_         165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND--AKLFEQI----LK-AEY------EFDSP  231 (307)
T ss_dssp             --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH----HT-TCC------CCCTT
T ss_pred             eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH--HHHHHHH----hc-cCC------CCCCc
Confidence                           23445689999999999999999999999864322  1111111    11 100      11111


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+..+.+++.+||+.||++|||++|+++
T Consensus       232 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         232 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            22234567888999999999999999999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.5e-36  Score=236.55  Aligned_cols=190  Identities=21%  Similarity=0.243  Sum_probs=137.9

Q ss_pred             HHhcCccccCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           33 AATDNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        33 ~~~~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      ...++|++.+.||+|+||.+++.       .+..||||.++.. .....+.+.+|+.+|++++|||||+++|++. .+.+
T Consensus         4 i~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~   82 (273)
T d1mp8a_           4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   82 (273)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             cCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeE
Confidence            45678999999999999996652       2346899998754 3445678999999999999999999999985 4678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++|||||++|+|.+++.....  .+++.....+                                               
T Consensus        83 ~iv~E~~~~g~l~~~~~~~~~--~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~  160 (273)
T d1mp8a_          83 WIIMELCTLGELRSFLQVRKY--SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  160 (273)
T ss_dssp             EEEEECCTTEEHHHHHHHTTT--TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             EEEEEeccCCcHHhhhhccCC--CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccC
Confidence            999999999999988743221  1222222111                                               


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                         .+....|+.++|||||||++|||++ |..||.....  .++...+    . .+..      
T Consensus       161 ~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~--~~~~~~i----~-~~~~------  227 (273)
T d1mp8a_         161 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRI----E-NGER------  227 (273)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHH----H-TTCC------
T ss_pred             CcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH--HHHHHHH----H-cCCC------
Confidence                               2334568899999999999999998 6777654332  2222221    1 1111      


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                         .+.+..++..+.+++.+||+.||++|||+++|++.|+.+++
T Consensus       228 ---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         228 ---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence               11222344678899999999999999999999999998764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-35  Score=233.35  Aligned_cols=183  Identities=20%  Similarity=0.187  Sum_probs=133.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc------ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ------SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~------~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      +.|++++.||+|+||+|++    .+|+.||||++...      .....+.+.+|+.+|+.++|||||++++++.+.+.++
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            5799999999999999665    56899999999643      1234678999999999999999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCcccee----------------------------------------ee--------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRV----------------------------------------RI--------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~----------------------------------------~i--------  137 (253)
                      +|||||++|+|.+++.+..   .+++....                                        .+        
T Consensus        90 iv~E~~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhh
Confidence            9999999999999883211   01111000                                        00        


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          .+....|+.++||||+||++|||++|..||.....  ......+    . ....      
T Consensus       167 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~~~i----~-~~~~------  233 (293)
T d1jksa_         167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANV----S-AVNY------  233 (293)
T ss_dssp             CTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-TTCC------
T ss_pred             cCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCH--HHHHHHH----H-hcCC------
Confidence                                23445689999999999999999999999874332  1111111    0 0100      


Q ss_pred             cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          198 MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       198 ~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..........+..+.+++.+||+.||++|||++++++
T Consensus       234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         234 EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0001111123456788999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-35  Score=239.70  Aligned_cols=199  Identities=21%  Similarity=0.283  Sum_probs=144.4

Q ss_pred             HHHHHhcCccccCccccccccceEe---------eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL---------LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGCC   98 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~---------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~   98 (253)
                      +|....++|++.+.||+|+||.|++         .+++.||||+++.. .......+.+|+.+++.+ +|||||+++|++
T Consensus        17 ~~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~   96 (311)
T d1t46a_          17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGAC   96 (311)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            3556678999999999999999665         24568999999765 344556799999999999 699999999999


Q ss_pred             EecCeeEEEEeeCCCCChhhhccCCCCcC---------------CCCccceeee--------------------------
Q 043709           99 VEKGVKILIYEHMPNKSLDYFLFDPANKG---------------RLGWGTRVRI--------------------------  137 (253)
Q Consensus        99 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~---------------~~~~~~~~~i--------------------------  137 (253)
                      .+.+..+++||||++|+|.++++......               .+++.....+                          
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NI  176 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI  176 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccc
Confidence            99999999999999999999985432110               1111111111                          


Q ss_pred             -----------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcc
Q 043709          138 -----------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLT  176 (253)
Q Consensus       138 -----------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~  176 (253)
                                                               ....+.++.++|||||||++|||+|++.|+.........
T Consensus       177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~  256 (311)
T d1t46a_         177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK  256 (311)
T ss_dssp             EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred             cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH
Confidence                                                     233456889999999999999999976665544333322


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      +...+ .             ...+...+...+..+.+|+.+||+.||++|||+++|++.|+..+.+
T Consensus       257 ~~~~i-~-------------~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         257 FYKMI-K-------------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHH-H-------------HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHH-h-------------cCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            22222 1             1111122223346788899999999999999999999999987643

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-35  Score=234.61  Aligned_cols=190  Identities=21%  Similarity=0.307  Sum_probs=138.3

Q ss_pred             cCccccCccccccccceEee----CC----CEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKLL----NG----EQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~----~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      +.|++.+.||+|+||.|++.    ++    ..||||+++.. .......|.+|+.++++++|||||+++|++.+.+..++
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            57888999999999996652    11    36999999754 34445679999999999999999999999999999999


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +||||.+|++.+++.....  .+.+.....+                                                 
T Consensus        87 v~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~  164 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDG--EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  164 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             EEEecccCcchhhhhcccc--cccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCC
Confidence            9999999999887732211  1222221111                                                 


Q ss_pred             -------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                         .+..+.|+.++|||||||++|||++++.|+..... ...+...+     .         ..
T Consensus       165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~-~~~~~~~i-----~---------~~  229 (283)
T d1mqba_         165 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-NHEVMKAI-----N---------DG  229 (283)
T ss_dssp             ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-HHHHHHHH-----H---------TT
T ss_pred             ccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC-HHHHHHHH-----h---------cc
Confidence                               23445688999999999999999998777654332 22222221     1         11


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                      .+...+...+..+.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus       230 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         230 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             CCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            11222233446788899999999999999999999999988753

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-35  Score=236.97  Aligned_cols=202  Identities=17%  Similarity=0.197  Sum_probs=139.0

Q ss_pred             HhcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           34 ATDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        34 ~~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ..++|++++.||+|+||+|++    .+++.||+|+++.. .....+.+.+|+.+|+.++|||||++++++.+.+.+++||
T Consensus         4 ~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           4 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            357899999999999999665    56899999999765 3444678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      |||++|+|.+++.+..   .+++.....+                                                   
T Consensus        84 Ey~~gg~L~~~l~~~~---~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~  160 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA  160 (322)
T ss_dssp             ECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC
T ss_pred             EcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcc
Confidence            9999999999884321   1111111111                                                   


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh-hhcC---------------
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN-LWND---------------  188 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~-~~~~---------------  188 (253)
                                   .+.+..|+.++||||+||++|||++|+.||................. ....               
T Consensus       161 ~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (322)
T d1s9ja_         161 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSY  240 (322)
T ss_dssp             ---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------------
T ss_pred             ccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccccccc
Confidence                         33456799999999999999999999999976544322111110000 0000               


Q ss_pred             -------CCcccc----ccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhh
Q 043709          189 -------GSLWDL----MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSN  238 (253)
Q Consensus       189 -------~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~  238 (253)
                             ....+.    .............+..+.+++.+||..||.+|||++|+++  .++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         241 GMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             -----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             ccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence                   000000    0000000001112356888999999999999999999986  4544

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.5e-34  Score=234.77  Aligned_cols=184  Identities=21%  Similarity=0.197  Sum_probs=137.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      ++|++++.||+|+||.|++    .+|+.||||++........+.+.+|+.+|+.++|||||++++++.+++.+++|||||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5899999999999999665    468899999998766666778999999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      ++|+|.+++.+...  .+++.....+                                                      
T Consensus       106 ~gg~L~~~l~~~~~--~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~  183 (350)
T d1koaa2         106 SGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  183 (350)
T ss_dssp             CSCBHHHHHTCTTS--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred             CCCCHHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence            99999998843211  1111111111                                                      


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  ++.+..|+.++|||||||++|||++|..||.....  ......+...   ...        .......
T Consensus       184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--~~~~~~i~~~---~~~--------~~~~~~~  250 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVKSC---DWN--------MDDSAFS  250 (350)
T ss_dssp             EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT---CCC--------SCCGGGG
T ss_pred             eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH--HHHHHHHHhC---CCC--------CCccccc
Confidence                        23445688999999999999999999999864322  2222211000   000        1111112


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .++..+.+|+.+||..||++|||++|+++
T Consensus       251 ~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         251 GISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             GCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            34467888999999999999999999987

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=5.4e-34  Score=232.91  Aligned_cols=184  Identities=16%  Similarity=0.157  Sum_probs=136.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEeeC
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEHM  111 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~~  111 (253)
                      +.|++++.||+|+||.|++    .+++.||||+++.......+.+.+|+.+|+.++|||||++++++.+++.+++|||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5799999999999999665    578999999998765555678899999999999999999999999999999999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      ++|+|.+++.....  .++......+                                                      
T Consensus       109 ~gg~L~~~~~~~~~--~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~  186 (352)
T d1koba_         109 SGGELFDRIAAEDY--KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK  186 (352)
T ss_dssp             CCCBHHHHTTCTTC--CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE
T ss_pred             CCChHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCcee
Confidence            99999887633211  1111111100                                                      


Q ss_pred             ------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCH
Q 043709          138 ------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASY  205 (253)
Q Consensus       138 ------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (253)
                                  .+....|+.++|||||||++|||++|..||.....  ......+    . ...      .........
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~~~~i----~-~~~------~~~~~~~~~  253 (352)
T d1koba_         187 VTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNV----K-RCD------WEFDEDAFS  253 (352)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHH----H-HCC------CCCCSSTTT
T ss_pred             eccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH----H-hCC------CCCCccccc
Confidence                        23345689999999999999999999999864332  1111111    0 000      011111222


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          206 PILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       206 ~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ..+..+.+|+.+||+.||.+|||++|+++
T Consensus       254 ~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         254 SVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             TSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            34567889999999999999999999986

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-34  Score=227.39  Aligned_cols=180  Identities=19%  Similarity=0.260  Sum_probs=126.9

Q ss_pred             ccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe----cCeeEEE
Q 043709           38 FSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE----KGVKILI  107 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~----~~~~~lv  107 (253)
                      |++.+.||+|+||+|++    .+++.||+|++...  .....+.+.+|+++|++++|||||++++++.+    .+.+++|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            35667899999999665    46889999999754  34456789999999999999999999999865    3468999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccc---------------------------------------eeee-----------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGT---------------------------------------RVRI-----------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~---------------------------------------~~~i-----------  137 (253)
                      ||||++|+|.+++.+..   .+++..                                       .+.+           
T Consensus        91 mE~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFK---VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EeCCCCCcHHHHHhccc---cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            99999999999872211   000000                                       0011           


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ....+.|+.++|||||||++|||++|..||..... ...+...+     ..+...        ..
T Consensus       168 ~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~-~~~~~~~i-----~~~~~~--------~~  233 (270)
T d1t4ha_         168 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN-AAQIYRRV-----TSGVKP--------AS  233 (270)
T ss_dssp             TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-HHHHHHHH-----TTTCCC--------GG
T ss_pred             CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCccc-HHHHHHHH-----HcCCCC--------cc
Confidence                           22345689999999999999999999999864322 11111111     111111        11


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .....+..+.+++.+||+.||++|||++|+++
T Consensus       234 ~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         234 FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            11123346788999999999999999999986

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-35  Score=236.30  Aligned_cols=181  Identities=22%  Similarity=0.274  Sum_probs=131.3

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccc---cccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQS---GQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      +.|+.++.||+|+||.|++    .+++.||||++....   ....+.+.+|+.+|+.++|||||++++++.+++.+++||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~   94 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence            4599999999999999665    568899999997542   344567999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      |||.+|+|..++....   .+++.....+                                                   
T Consensus        95 E~~~~g~l~~~~~~~~---~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~  171 (309)
T d1u5ra_          95 EYCLGSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF  171 (309)
T ss_dssp             ECCSEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCC
T ss_pred             EecCCCchHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCcc
Confidence            9999999977662211   1222211111                                                   


Q ss_pred             ----------ee---ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 ----------YA---LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 ----------~~---~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                .+   ..+.|+.++|||||||++|||++|..||.....  ......+    .. ......        ..
T Consensus       172 ~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~--~~~~~~i----~~-~~~~~~--------~~  236 (309)
T d1u5ra_         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHI----AQ-NESPAL--------QS  236 (309)
T ss_dssp             CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHH----HH-SCCCCC--------SC
T ss_pred             ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH--HHHHHHH----Hh-CCCCCC--------CC
Confidence                      11   234588999999999999999999999864322  1111111    11 111111        11


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...+..+.+++.+||+.||++|||++++++
T Consensus       237 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         237 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            123457888999999999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-35  Score=232.57  Aligned_cols=178  Identities=13%  Similarity=0.111  Sum_probs=132.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++++.||+|+||+|++    .+++.||||++...   .....+.+.+|+.+|+.++||||+++++++.+++.+|+||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5799999999999999654    56899999999753   3455678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      |||++|+|.+++....   .++......+                                                   
T Consensus        88 Ey~~gg~L~~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EccCCCCHHHhhhccC---CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence            9999999998873211   0111100000                                                   


Q ss_pred             ----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                      .+.+..|+.++||||+||++|||++|..||.....  ..+...+    . ....          
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--~~~~~~i----~-~~~~----------  227 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--YLIFQKI----I-KLEY----------  227 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----H-TTCC----------
T ss_pred             cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH--HHHHHHH----H-cCCC----------
Confidence                            23445689999999999999999999999874322  1111111    1 1110          


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCCHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPTMLEIV  233 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il  233 (253)
                      ..+...+..+.+|+.+||+.||++|||++|++
T Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         228 DFPEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             CCCccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            11123345788999999999999999999865

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-34  Score=230.74  Aligned_cols=188  Identities=22%  Similarity=0.289  Sum_probs=133.4

Q ss_pred             cCccccccccceEee-------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEe-cCeeEEEEeeC
Q 043709           41 ENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE-KGVKILIYEHM  111 (253)
Q Consensus        41 ~~~ig~G~fg~~~~~-------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~-~~~~~lv~e~~  111 (253)
                      .+.||+|+||++++.       +...||||+++.. +....++|.+|+.+|++++||||++++|++.. ++..++|||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            468999999997652       1236899999754 45566889999999999999999999999876 46899999999


Q ss_pred             CCCChhhhccCCCCcCCCCccceeee------------------------------------------------------
Q 043709          112 PNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------------  137 (253)
Q Consensus       112 ~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------------  137 (253)
                      ++|+|.+++......  ..+.....+                                                      
T Consensus       112 ~~g~l~~~~~~~~~~--~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~  189 (311)
T d1r0pa_         112 KHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH  189 (311)
T ss_dssp             TTCBHHHHHHCTTCC--CBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTT
T ss_pred             ecCchhhhhcccccc--chHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccce
Confidence            999999988532211  111111111                                                      


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     ......++.++|||||||++|||++|+.||....... .+...+    . .+.  .       ..
T Consensus       190 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-~~~~~i----~-~g~--~-------~~  254 (311)
T d1r0pa_         190 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYL----L-QGR--R-------LL  254 (311)
T ss_dssp             CTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHH----H-TTC--C-------CC
T ss_pred             ecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-HHHHHH----H-cCC--C-------CC
Confidence                           2344568899999999999999999988876543222 222211    1 111  1       11


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCC
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPY  245 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~  245 (253)
                      .+...+..+.+++.+||+.||++|||+.||++.|+.+......
T Consensus       255 ~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~  297 (311)
T d1r0pa_         255 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  297 (311)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhh
Confidence            1122345688899999999999999999999999999866443

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-35  Score=231.38  Aligned_cols=187  Identities=25%  Similarity=0.325  Sum_probs=125.8

Q ss_pred             hcCccccCccccccccceEee-----C--CCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCee
Q 043709           35 TDNFSMENKLGEGGFGPGKLL-----N--GEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVK  104 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~~-----~--~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~  104 (253)
                      .++|++.+.||+|+||.+++.     +  ...||||++...   ..+..+.|.+|+.+|+.++||||++++|++.+ +..
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            367999999999999996652     1  236899999754   34446789999999999999999999999965 567


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      ++|||||.+|++.+++....  ..+++.....+                                               
T Consensus        86 ~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             heeeeeecCcchhhhhhccc--CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            89999999999988763211  11222211111                                               


Q ss_pred             ---------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ---------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ---------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                           ......++.++|||||||++|||+| |..||....  .......+    ...+      
T Consensus       164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~--~~~~~~~i----~~~~------  231 (273)
T d1u46a_         164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKI----DKEG------  231 (273)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHH----HTSC------
T ss_pred             CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC--HHHHHHHH----HhCC------
Confidence                                 2233457889999999999999998 788875332  22222111    1111      


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhc
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNE  239 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~  239 (253)
                         .+.+.....+..+.+|+.+||..||++|||+++|.+.|++.
T Consensus       232 ---~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         232 ---ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ---CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence               11112223345788899999999999999999999998864

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-35  Score=234.62  Aligned_cols=194  Identities=23%  Similarity=0.362  Sum_probs=136.3

Q ss_pred             HHHHhcCccccCccccccccceEee-----------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEeEE
Q 043709           31 ISAATDNFSMENKLGEGGFGPGKLL-----------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRIIGC   97 (253)
Q Consensus        31 l~~~~~~~~~~~~ig~G~fg~~~~~-----------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~   97 (253)
                      |....++|++++.||+|+||.+++.           .+..||||+++.+ .......+.+|...+..+ +|||||+++++
T Consensus         8 ~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~   87 (299)
T d1fgka_           8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA   87 (299)
T ss_dssp             TBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccc
Confidence            3345678999999999999996652           1247999999765 334457899999999998 79999999999


Q ss_pred             EEecCeeEEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee---------------------------
Q 043709           98 CVEKGVKILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI---------------------------  137 (253)
Q Consensus        98 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i---------------------------  137 (253)
                      +.+++.+++|||||.+|+|.+++......             ..+++.....+                           
T Consensus        88 ~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiL  167 (299)
T d1fgka_          88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  167 (299)
T ss_dssp             ECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             cccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeeccccee
Confidence            99999999999999999999999643311             11222222222                           


Q ss_pred             ----------------------------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcc
Q 043709          138 ----------------------------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLT  176 (253)
Q Consensus       138 ----------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~  176 (253)
                                                              .+..+.|+.++|||||||++|||++ |..||.....  ..
T Consensus       168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~--~~  245 (299)
T d1fgka_         168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EE  245 (299)
T ss_dssp             ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HH
T ss_pred             ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCH--HH
Confidence                                                    2345679999999999999999998 5666543222  11


Q ss_pred             hhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          177 LLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      +...+     ..+.         +...+..++..+.+|+.+||+.||++|||+.+|++.|+.+.
T Consensus       246 ~~~~i-----~~~~---------~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         246 LFKLL-----KEGH---------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHH-----HTTC---------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHH-----HcCC---------CCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            21111     1111         11122234467889999999999999999999999999886

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.4e-34  Score=232.78  Aligned_cols=196  Identities=24%  Similarity=0.355  Sum_probs=140.2

Q ss_pred             HHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCV   99 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~   99 (253)
                      +|....++|++.+.||+|+||+|++.         +++.||||+++.. .......|.+|+.++++++|||||+++|++.
T Consensus        14 ~~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~   93 (308)
T d1p4oa_          14 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS   93 (308)
T ss_dssp             TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred             ceeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEe
Confidence            35555688999999999999997652         3568999999754 3444567999999999999999999999999


Q ss_pred             ecCeeEEEEeeCCCCChhhhccCCC-------CcCCCCccceeee-----------------------------------
Q 043709          100 EKGVKILIYEHMPNKSLDYFLFDPA-------NKGRLGWGTRVRI-----------------------------------  137 (253)
Q Consensus       100 ~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i-----------------------------------  137 (253)
                      ..+..++|||||.+|+|.+++....       .....++..+..+                                   
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~K  173 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK  173 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEE
Confidence            9999999999999999999873211       0000111111111                                   


Q ss_pred             --------------------------------eeecCccccccceeehhHHHHHHHhCC-CCcCcCCCCCcchhhhhhHh
Q 043709          138 --------------------------------YALHGVFSIKSDVFSFGVLLLETLSSK-KNAHFYNTNSLTLLGYVIWN  184 (253)
Q Consensus       138 --------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~-~p~~~~~~~~~~~~~~~~~~  184 (253)
                                                      ....+.++.++|||||||++|||+|+. .||...  +..+....+   
T Consensus       174 l~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~--~~~~~~~~i---  248 (308)
T d1p4oa_         174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL--SNEQVLRFV---  248 (308)
T ss_dssp             ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS--CHHHHHHHH---
T ss_pred             EeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC--CHHHHHHHH---
Confidence                                            223456888999999999999999996 444322  122222211   


Q ss_pred             hhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          185 LWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                       . .+..         .+.+..++..+.+++.+||+.+|++|||+++|++.|+...+
T Consensus       249 -~-~~~~---------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         249 -M-EGGL---------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             -H-TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             -H-hCCC---------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence             1 1111         11122334678899999999999999999999999998864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.6e-33  Score=227.68  Aligned_cols=188  Identities=16%  Similarity=0.154  Sum_probs=135.9

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++|++.+.||+|+||.|++    .+++.||||+++... .....+.+|+.+|+.++|||||++++++.+.+.+|+||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            46799999999999999665    568899999998643 3345688999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      |++|+|.+++.....  .++......+                                                     
T Consensus        83 ~~gg~L~~~i~~~~~--~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~  160 (321)
T d1tkia_          83 ISGLDIFERINTSAF--ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCBHHHHHTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             CCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcc
Confidence            999999999854221  1121111111                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCC
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEAS  204 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (253)
                                   ......|+.++||||+||++|+|++|..||.....  ..+...+    .... .      .......
T Consensus       161 ~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~--~~~~~~i----~~~~-~------~~~~~~~  227 (321)
T d1tkia_         161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--QQIIENI----MNAE-Y------TFDEEAF  227 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHH----HHTC-C------CCCHHHH
T ss_pred             cccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH--HHHHHHH----HhCC-C------CCChhhc
Confidence                         22344588999999999999999999999864432  1111111    1000 0      0000001


Q ss_pred             HHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhh
Q 043709          205 YPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSN  238 (253)
Q Consensus       205 ~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~  238 (253)
                      ...+..+.+|+.+||..||++|||++|+++  .++.
T Consensus       228 ~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         228 KEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             TTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             cCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            123456788999999999999999999996  4543

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.98  E-value=8.1e-34  Score=225.26  Aligned_cols=190  Identities=18%  Similarity=0.200  Sum_probs=136.1

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC----e
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG----V  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~----~  103 (253)
                      .++|++.+.||+|+||.|++    .+++.||||+++..   +....+.+.+|+.+++.++||||+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            35799999999999999665    56899999999754   3344567999999999999999999999997654    3


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      +|+|||||++|+|..++....   .+++.....+                                              
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~---~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~  162 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  162 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred             EEEEEECCCCCEehhhhcccC---CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhc
Confidence            899999999999998873211   1111111111                                              


Q ss_pred             ----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccc
Q 043709          138 ----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLM  195 (253)
Q Consensus       138 ----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (253)
                                            ......|+.++|||||||++|||+||..||.....  ....    ..........   
T Consensus       163 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--~~~~----~~~~~~~~~~---  233 (277)
T d1o6ya_         163 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--VSVA----YQHVREDPIP---  233 (277)
T ss_dssp             ----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHH----HHHHHCCCCC---
T ss_pred             cccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH--HHHH----HHHHhcCCCC---
Confidence                                  23445689999999999999999999999864322  1111    1111111110   


Q ss_pred             cccCCCCCCHHHHHHHHHHhccccCCCCCCCC-CHHHHHHHHhhcc
Q 043709          196 DPMLQTEASYPILKRYSNVDLFCFRENATDRP-TMLEIVSMLSNEI  240 (253)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RP-s~~~il~~L~~~~  240 (253)
                          ........+..+.+++.+||+.||++|| |+++++..|..+.
T Consensus       234 ----~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         234 ----PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             ----GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ----CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence                0111122346788899999999999999 8999998887653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-33  Score=226.98  Aligned_cols=201  Identities=23%  Similarity=0.325  Sum_probs=140.1

Q ss_pred             cHHHHHHHhcCccccCccccccccceEee---------CCCEEEEEEeccc-ccccHHHHHHHHHHHHhc-cCCCcceEe
Q 043709           27 SLASISAATDNFSMENKLGEGGFGPGKLL---------NGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKL-QDINLVRII   95 (253)
Q Consensus        27 ~~~~l~~~~~~~~~~~~ig~G~fg~~~~~---------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~~~   95 (253)
                      ..++|....++|++.+.||+|+||.|++.         +++.||||+++.. .....+.+.+|..++.++ +|+||++++
T Consensus         4 ~~~~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~   83 (299)
T d1ywna1           4 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   83 (299)
T ss_dssp             CHHHHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             CCccccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEee
Confidence            55677777889999999999999996652         3468999999754 344556788888888887 699999999


Q ss_pred             EEEEec-CeeEEEEeeCCCCChhhhccCCCCc-------------CCCCccceeee------------------------
Q 043709           96 GCCVEK-GVKILIYEHMPNKSLDYFLFDPANK-------------GRLGWGTRVRI------------------------  137 (253)
Q Consensus        96 ~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~-------------~~~~~~~~~~i------------------------  137 (253)
                      +++... +.++++||||++|+|.++++.....             ..+++.....+                        
T Consensus        84 ~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~  163 (299)
T d1ywna1          84 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAAR  163 (299)
T ss_dssp             EEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             eeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCcc
Confidence            998765 4689999999999999998542211             01112111111                        


Q ss_pred             -------------------------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCC
Q 043709          138 -------------------------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNS  174 (253)
Q Consensus       138 -------------------------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~  174 (253)
                                                                 .+..+.++.++|||||||++|||+++..|+.......
T Consensus       164 NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~  243 (299)
T d1ywna1         164 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID  243 (299)
T ss_dssp             GEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             ceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH
Confidence                                                       2334568899999999999999999865433222222


Q ss_pred             cchhhhhhHhhhcCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhccc
Q 043709          175 LTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIV  241 (253)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~  241 (253)
                      ..+...+ .    .+         .+...+...+..+.+++.+||+.||++|||+++|++.|+.+++
T Consensus       244 ~~~~~~~-~----~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         244 EEFCRRL-K----EG---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             HHHHHHH-H----HT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHH-h----cC---------CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            2222221 1    11         1111222334578889999999999999999999999998874

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=2.3e-33  Score=222.06  Aligned_cols=184  Identities=16%  Similarity=0.173  Sum_probs=133.3

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccccc---------ccHHHHHHHHHHHHhcc-CCCcceEeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG---------QGLEEFKNEMMLIAKLQ-DINLVRIIGCCVE  100 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~  100 (253)
                      .++|++.+.||+|+||++++    .+++.||||+++....         ...+.+.+|+.++++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            36899999999999999555    4788999999975421         12346889999999997 9999999999999


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+.+|||||||++|+|.++++...   .+++.....+                                           
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~  158 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC  158 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CcceEEEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchhee
Confidence            999999999999999999983211   1222211111                                           


Q ss_pred             ---------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC
Q 043709          138 ---------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS  190 (253)
Q Consensus       138 ---------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  190 (253)
                                                 ......++.++||||+||++|||++|..||......  .....+    .. +.
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~--~~~~~i----~~-~~  231 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLRMI----MS-GN  231 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH----HH-TC
T ss_pred             EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH--HHHHHH----Hh-CC
Confidence                                       112234678999999999999999999998754321  111111    11 10


Q ss_pred             ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          191 LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .      ..........+..+.+++.+||+.||++|||+++|++
T Consensus       232 ~------~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         232 Y------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             C------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             C------CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            0      0111122245567889999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.2e-33  Score=225.79  Aligned_cols=186  Identities=23%  Similarity=0.330  Sum_probs=131.3

Q ss_pred             cCccccCccccccccceEe----eCCC----EEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGE----QVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~l  106 (253)
                      .+|++++.||+|+||+|++    .+++    .||+|+++.. +....+.+.+|+.++++++|||||+++|+|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            4699999999999999765    2343    5899988754 455677899999999999999999999999864 5688


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      +++|+.+|+|.+++.....  .+++.....+                                                 
T Consensus        88 v~e~~~~~~l~~~~~~~~~--~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EEEeccCCccccccccccc--CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence            8999999999887743211  1222222111                                                 


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHh-CCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLS-SKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                        .+..+.|+.++|||||||++|||+| |..||.....  .++...+ .    .+         
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~--~~~~~~i-~----~~---------  229 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSIL-E----KG---------  229 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCG--GGHHHHH-H----HT---------
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCH--HHHHHHH-H----cC---------
Confidence                              2345568999999999999999999 5666653322  2222222 1    11         


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcc
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEI  240 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~  240 (253)
                      .+...+..++..+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus       230 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         230 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            111122234467888999999999999999999999887764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-33  Score=223.98  Aligned_cols=197  Identities=18%  Similarity=0.220  Sum_probs=132.3

Q ss_pred             hcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHH--HHHHHHHhccCCCcceEeEEEEecC----eeEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFK--NEMMLIAKLQDINLVRIIGCCVEKG----VKIL  106 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~--~E~~~l~~l~H~nIv~~~~~~~~~~----~~~l  106 (253)
                      ..+|.+.+.||+|+||.+++  .+|+.||||+++..   ..+.+.  .|+..++.++|||||+++|++.+.+    .+++
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            35788899999999999664  67899999999753   223344  4555556789999999999998654    5899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------------  137 (253)
                      |||||++|+|.+++++..    ++|..+..+                                                 
T Consensus        79 v~Ey~~~g~L~~~l~~~~----l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl  154 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRYT----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             EEECCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEecccCCCHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCc
Confidence            999999999999985321    222211111                                                 


Q ss_pred             ----------------------------ee------ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhh---
Q 043709          138 ----------------------------YA------LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGY---  180 (253)
Q Consensus       138 ----------------------------~~------~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~---  180 (253)
                                                  ..      ....++.++|||||||++|||+||..|+.............   
T Consensus       155 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~  234 (303)
T d1vjya_         155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             CEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred             cccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccc
Confidence                                        00      01125778999999999999999988775443322111100   


Q ss_pred             -----hhHhhhcCCCccccccccCCCC-CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccC
Q 043709          181 -----VIWNLWNDGSLWDLMDPMLQTE-ASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVN  242 (253)
Q Consensus       181 -----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~  242 (253)
                           ..........    .++..... ...+....+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus       235 ~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         235 DPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             SCCHHHHHHHHTTSC----CCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHhccc----cCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence                 0011111111    11111111 1234566788999999999999999999999999988743

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-32  Score=222.59  Aligned_cols=181  Identities=13%  Similarity=0.117  Sum_probs=134.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      -++|++++.||+|+||.|++    .+++.||||++++.   .....+.+.+|+.+|+.++||||+++++++.+.+.+++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            36799999999999999654    67999999999754   345567899999999999999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcC------------------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKG------------------------------------------------------------  127 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~------------------------------------------------------------  127 (253)
                      ||||++|+|.+++.......                                                            
T Consensus        84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~  163 (337)
T d1o6la_          84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK  163 (337)
T ss_dssp             EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBC
T ss_pred             eeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccc
Confidence            99999999988873211000                                                            


Q ss_pred             ----CCCccceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCC
Q 043709          128 ----RLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEA  203 (253)
Q Consensus       128 ----~~~~~~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (253)
                          +..+..+.  ++.+..|+.++||||+||++|||++|..||.....  ..+....   .  ...          ...
T Consensus       164 ~~~GT~~Y~aPE--~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~--~~~~~~i---~--~~~----------~~~  224 (337)
T d1o6la_         164 TFCGTPEYLAPE--VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELI---L--MEE----------IRF  224 (337)
T ss_dssp             CCEECGGGCCGG--GGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH---H--HCC----------CCC
T ss_pred             cceeCHHHhhhh--hccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH--HHHHHHH---h--cCC----------CCC
Confidence                00000000  34566799999999999999999999999875432  1121111   0  111          011


Q ss_pred             CHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          204 SYPILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       204 ~~~~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      +...+..+.+|+.+||+.||.+||+     ++++++
T Consensus       225 p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             CccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            1233456788999999999999995     788875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.8e-32  Score=217.31  Aligned_cols=196  Identities=16%  Similarity=0.082  Sum_probs=127.0

Q ss_pred             ccCccccccccceEe----eCCCEEEEEEeccccc-----ccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           40 MENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG-----QGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        40 ~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      .++.||+|+||+|++    .+++.||||+++....     ...+.+.+|+.+|+.++|||||++++++.+.+.+++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            357899999999665    5689999999975421     1235689999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      |.++++..+.....   .++......+                                                     
T Consensus        82 ~~~~~~~~~~~~~~---~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~  158 (299)
T d1ua2a_          82 METDLEVIIKDNSL---VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT  158 (299)
T ss_dssp             CSEEHHHHHTTCCS---SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred             hcchHHhhhhhccc---CCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence            99888776663211   1111111111                                                     


Q ss_pred             ------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc--CCCcccccc------
Q 043709          138 ------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN--DGSLWDLMD------  196 (253)
Q Consensus       138 ------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------  196 (253)
                                  .+ ....|+.++||||+||++|||++|..||.....  ......+......  .........      
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~--~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD--LDQLTRIFETLGTPTEEQWPDMCSLPDYVT  236 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCTTTSSSTTSSTTCCC
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCH--HHHHHHHHHhcCCCChhhccchhccchhhh
Confidence                        11 234578999999999999999999988864332  1111111111100  000000000      


Q ss_pred             -ccCCCCC----CHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          197 -PMLQTEA----SYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       197 -~~~~~~~----~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                       .......    .......+.+|+.+||+.||++|||++|+++  .|++..
T Consensus       237 ~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         237 FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             CCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             hccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence             0000000    0123457889999999999999999999986  454433

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.6e-32  Score=217.22  Aligned_cols=200  Identities=15%  Similarity=0.173  Sum_probs=130.0

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++++.||+|+||+|++    .+++.||||+++..  .....+.+.+|+++|++++|||||++++++.+.+.+++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5799999999999999555    56899999999754  23446789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      ||.++.+........  ..+++.....+                                                    
T Consensus        82 ~~~~~~~~~~~~~~~--~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~  159 (298)
T d1gz8a_          82 FLHQDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY  159 (298)
T ss_dssp             CCSEEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred             ecCCchhhhhhhhcc--cCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence            998654443332111  11222211111                                                    


Q ss_pred             --------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC-Cc-cccc-----c
Q 043709          138 --------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG-SL-WDLM-----D  196 (253)
Q Consensus       138 --------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-----~  196 (253)
                                    ......++.++||||+||++|+|++|+.||......  .............. .. ....     .
T Consensus       160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T d1gz8a_         160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI--DQLFRIFRTLGTPDEVVWPGVTSMPDYK  237 (298)
T ss_dssp             TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHH--HHHHHHHHhcCCCchhhccccccccccc
Confidence                          112233578999999999999999999998644321  11111101111000 00 0000     0


Q ss_pred             cc---CCCC----CCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--Hhhc
Q 043709          197 PM---LQTE----ASYPILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNE  239 (253)
Q Consensus       197 ~~---~~~~----~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~  239 (253)
                      ..   ....    ........+.+++.+||..||.+|||++|+++.  |+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             TTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence            00   0000    011234577889999999999999999999973  5544

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1e-31  Score=216.39  Aligned_cols=180  Identities=17%  Similarity=0.195  Sum_probs=132.8

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++++.||+|+||+|++    .+|+.||||+++..   .....+.+.+|+.+|+.++|||||++++++.+.+.+++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5799999999999999655    56899999999753   3455678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcC-------------------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKG-------------------------------------------------------------  127 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~-------------------------------------------------------------  127 (253)
                      |||.+|+|..++.......                                                             
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~G  163 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCG  163 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCS
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccC
Confidence            9999999988873211110                                                             


Q ss_pred             CCCccceeeeeeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHHH
Q 043709          128 RLGWGTRVRIYALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYPI  207 (253)
Q Consensus       128 ~~~~~~~~~i~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (253)
                      +..+..+.  .+.+..|+.++||||+||++|||++|..||.....  ..+...+    .. +.          ...+...
T Consensus       164 t~~Y~APE--~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i----~~-~~----------~~~p~~~  224 (316)
T d1fota_         164 TPDYIAPE--VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT--MKTYEKI----LN-AE----------LRFPPFF  224 (316)
T ss_dssp             CTTTCCHH--HHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--HHHHHHH----HH-CC----------CCCCTTS
T ss_pred             cccccCHH--HHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH--HHHHHHH----Hc-CC----------CCCCCCC
Confidence            00000000  33456689999999999999999999999864322  1111111    11 10          0111223


Q ss_pred             HHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          208 LKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       208 ~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      +..+.+++.+||..||.+||     |++++++
T Consensus       225 s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         225 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            45678889999999999996     8999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.7e-33  Score=223.10  Aligned_cols=179  Identities=19%  Similarity=0.206  Sum_probs=130.5

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHH-hccCCCcceEeEEEEecCeeEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIA-KLQDINLVRIIGCCVEKGVKILI  107 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~-~l~H~nIv~~~~~~~~~~~~~lv  107 (253)
                      ++|++++.||+|+||+|++    .+++.||||+++..   .....+.+..|..++. .++|||||++++++.+++.+|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            5799999999999999665    57899999999754   2445567778887765 68999999999999999999999


Q ss_pred             EeeCCCCChhhhccCCCCcCCCCccceeee--------------------------------------------------
Q 043709          108 YEHMPNKSLDYFLFDPANKGRLGWGTRVRI--------------------------------------------------  137 (253)
Q Consensus       108 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i--------------------------------------------------  137 (253)
                      ||||++|+|.+++.....   ++......+                                                  
T Consensus        82 mEy~~~g~L~~~i~~~~~---~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHK---FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             EECCTTCBHHHHHHHHSS---CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EeecCCCcHHHHhhccCC---CCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccc
Confidence            999999999999832111   111000000                                                  


Q ss_pred             ---------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCC
Q 043709          138 ---------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTE  202 (253)
Q Consensus       138 ---------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  202 (253)
                                     .+....|+.++||||+||++|||++|+.||.....  ..+...+    .. +.      +    .
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i----~~-~~------~----~  221 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSI----RM-DN------P----F  221 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH-CC------C----C
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH--HHHHHHH----Hc-CC------C----C
Confidence                           34556799999999999999999999999864332  1222111    10 10      1    1


Q ss_pred             CCHHHHHHHHHHhccccCCCCCCCCCHH-HHHH
Q 043709          203 ASYPILKRYSNVDLFCFRENATDRPTML-EIVS  234 (253)
Q Consensus       203 ~~~~~~~~~~~l~~~cl~~~p~~RPs~~-~il~  234 (253)
                      .+...+..+.+|+.+||..||++||++. ++++
T Consensus       222 ~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         222 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            1122346688899999999999999985 6763

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=5.4e-32  Score=222.02  Aligned_cols=182  Identities=18%  Similarity=0.133  Sum_probs=127.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHH---HHHHHhccCCCcceEeEEEEecCeeE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNE---MMLIAKLQDINLVRIIGCCVEKGVKI  105 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E---~~~l~~l~H~nIv~~~~~~~~~~~~~  105 (253)
                      ++|++.+.||+|+||.|++    .+|+.||||++...   .......+.+|   +.+++.++|||||++++++.+.+.++
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            5799999999999999664    56899999999643   12233344444   66667778999999999999999999


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      +|||||++|+|.+++.+...   +.......+                                                
T Consensus        84 ivmE~~~gg~L~~~l~~~~~---~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGV---FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCS---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred             EEEEecCCCcHHHHHHhccc---ccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCC
Confidence            99999999999998832111   111100000                                                


Q ss_pred             ---------------eee-cCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCC
Q 043709          138 ---------------YAL-HGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQT  201 (253)
Q Consensus       138 ---------------~~~-~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (253)
                                     .+. ...|+.++|||||||++|||++|..||..........+.   ... ...          ..
T Consensus       161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~---~~~-~~~----------~~  226 (364)
T d1omwa3         161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID---RMT-LTM----------AV  226 (364)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH---HHS-SSC----------CC
T ss_pred             cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH---Hhc-ccC----------CC
Confidence                           222 345899999999999999999999999755433221111   000 000          01


Q ss_pred             CCCHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          202 EASYPILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       202 ~~~~~~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                      ..+..++..+.+++.+||+.||++|||     ++++++
T Consensus       227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         227 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            111123456888999999999999999     688874

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=217.88  Aligned_cols=183  Identities=15%  Similarity=0.121  Sum_probs=127.2

Q ss_pred             hcCccccC-ccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhc-cCCCcceEeEEEEe----cCee
Q 043709           35 TDNFSMEN-KLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKL-QDINLVRIIGCCVE----KGVK  104 (253)
Q Consensus        35 ~~~~~~~~-~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~~~~~~~~----~~~~  104 (253)
                      .++|.+.. .||+|+||+|++    .+++.||||+++.     ...+.+|+.++.++ +|||||++++++.+    ++.+
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            35798875 599999999655    5689999999964     24678899987655 89999999999875    4678


Q ss_pred             EEEEeeCCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------
Q 043709          105 ILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------  137 (253)
Q Consensus       105 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------  137 (253)
                      |+|||||+||+|.+++.+... ..+++.....+                                               
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~~-~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~  163 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  163 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCSC-CCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEECCCCCcHHHHHHhcCC-CCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccccceeee
Confidence            999999999999999854211 11111111111                                               


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDP  197 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (253)
                                          .+....|+.++|||||||++|+|+||..||........  .... ..        .+...
T Consensus       164 ~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~--~~~~-~~--------~i~~~  232 (335)
T d2ozaa1         164 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI--SPGM-KT--------RIRMG  232 (335)
T ss_dssp             CCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------------------CCCSC
T ss_pred             ccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH--HHHH-HH--------HHhcC
Confidence                                33455689999999999999999999999865432211  0000 00        00011


Q ss_pred             c--CCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          198 M--LQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       198 ~--~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      .  .........+..+.+|+.+||+.||++|||+.++++
T Consensus       233 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             SSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            1  111111234567889999999999999999999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=1.8e-31  Score=212.62  Aligned_cols=194  Identities=15%  Similarity=0.155  Sum_probs=133.6

Q ss_pred             cCccccCccccccccceEe---eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++++.||+|+||+|++   .+++.||||+++..  .....+.+.+|+.+|+.++||||+++++++.+.+..+++|||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            5799999999999999665   46889999999754  344467899999999999999999999999999999999999


Q ss_pred             CCCCChhhhccCCCCcCCCCccceeee-----------------------------------------------------
Q 043709          111 MPNKSLDYFLFDPANKGRLGWGTRVRI-----------------------------------------------------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~~~~~~~~~~~~~i-----------------------------------------------------  137 (253)
                      +.++++..+.....   .++......+                                                     
T Consensus        82 ~~~~~~~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  158 (286)
T d1ob3a_          82 LDQDLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (286)
T ss_dssp             CSEEHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             ehhhhHHHHHhhcC---CcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence            99887777763221   1111111111                                                     


Q ss_pred             -------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhc--CCCc-----------
Q 043709          138 -------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWN--DGSL-----------  191 (253)
Q Consensus       138 -------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~-----------  191 (253)
                                   ......++.++||||+||++|||++|+.||......  ............  ....           
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA--DQLMRIFRILGTPNSKNWPNVTELPKYDP  236 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHH--HHHHHHHHhhCCCChhhccchhhhhhccc
Confidence                         112345789999999999999999999998654321  111111011000  0000           


Q ss_pred             -cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          192 -WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       192 -~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       .....+.............+.+++.+||+.||++|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             0000011111122234467888999999999999999999984

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=4.4e-31  Score=215.48  Aligned_cols=179  Identities=17%  Similarity=0.157  Sum_probs=132.6

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc---ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ---SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~  108 (253)
                      ++|++++.||+|+||.|++    .+|+.||||++...   .....+.+.+|+.+|+.++|||||++++++.+.+.+++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            4699999999999999655    56899999999743   3455678999999999999999999999999999999999


Q ss_pred             eeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------------
Q 043709          109 EHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------------  137 (253)
                      ||+.+|+|..++.+..   .++......+                                                   
T Consensus       121 e~~~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~  197 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT  197 (350)
T ss_dssp             ECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred             ccccccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeeccccccc
Confidence            9999999988873211   1111111110                                                   


Q ss_pred             -----------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCccccccccCCCCCCHH
Q 043709          138 -----------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPMLQTEASYP  206 (253)
Q Consensus       138 -----------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (253)
                                 ++.+..|+.++|||||||++|||++|..||.....  ..+...+    .. +.          ...+..
T Consensus       198 ~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~--~~~~~~i----~~-~~----------~~~p~~  260 (350)
T d1rdqe_         198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKI----VS-GK----------VRFPSH  260 (350)
T ss_dssp             CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH----HH-CC----------CCCCTT
T ss_pred             ccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCH--HHHHHHH----hc-CC----------CCCCcc
Confidence                       33456689999999999999999999999864321  1121111    10 10          011122


Q ss_pred             HHHHHHHHhccccCCCCCCCC-----CHHHHHH
Q 043709          207 ILKRYSNVDLFCFRENATDRP-----TMLEIVS  234 (253)
Q Consensus       207 ~~~~~~~l~~~cl~~~p~~RP-----s~~~il~  234 (253)
                      .+..+.+++.+||..||.+|+     |++++++
T Consensus       261 ~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         261 FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            345678899999999999994     8999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-30  Score=207.74  Aligned_cols=195  Identities=16%  Similarity=0.103  Sum_probs=134.1

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecCeeEEEEe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      ++|++++.||+|+||+|++    .+++.||||+++..  .....+.+.+|+.+|+.++||||+++++++.+.+..+++++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5799999999999999665    57889999999754  33456789999999999999999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------------  137 (253)
                      ++.++++..++.....   ........+                                                    
T Consensus        82 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~  158 (292)
T d1unla_          82 FCDQDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSEEHHHHHHHTTTC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred             eccccccccccccccc---cchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence            9999999887733221   111111101                                                    


Q ss_pred             -------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC--C-----------
Q 043709          138 -------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG--S-----------  190 (253)
Q Consensus       138 -------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~-----------  190 (253)
                                   .. ....++.++||||+||++|||++|+.||........ ....+........  .           
T Consensus       159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T d1unla_         159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD-QLKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH-HHHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHH-HHHHHHhhcCCCChhhhhhhhhccccc
Confidence                         11 223468999999999999999999999765433222 1111111111000  0           


Q ss_pred             -ccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          191 -LWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       191 -~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                       ....................+.+|+.+||+.||.+|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             00000001111122234456788999999999999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4e-30  Score=207.67  Aligned_cols=186  Identities=16%  Similarity=0.150  Sum_probs=129.3

Q ss_pred             cCccccCccccccccceEee-------CCCEEEEEEeccc----ccccHHHHHHHHHHHHhccC-CCcceEeEEEEecCe
Q 043709           36 DNFSMENKLGEGGFGPGKLL-------NGEQVAVKRLSSQ----SGQGLEEFKNEMMLIAKLQD-INLVRIIGCCVEKGV  103 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~~-------~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H-~nIv~~~~~~~~~~~  103 (253)
                      ++|++++.||+|+||+|++.       +|+.||||+++..    .....+.+.+|+.++++++| |||+++++++.+.+.
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            67999999999999997652       5789999999753    22345678999999999976 899999999999999


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcC------------------------------------------CCCccceeee----
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKG------------------------------------------RLGWGTRVRI----  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~------------------------------------------~~~~~~~~~i----  137 (253)
                      ++++|||+.+|+|.+++.......                                          ..+++....+    
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~  183 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE  183 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccc
Confidence            999999999999999883211100                                          0000000000    


Q ss_pred             -----------------ee--ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccccc
Q 043709          138 -----------------YA--LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMDPM  198 (253)
Q Consensus       138 -----------------~~--~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (253)
                                       ..  ....++.++|||||||++|||++|..||........  ...........          
T Consensus       184 ~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~--~~~i~~~~~~~----------  251 (322)
T d1vzoa_         184 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKS----------  251 (322)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHC----------
T ss_pred             cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcccC----------
Confidence                             11  223467899999999999999999999876544321  11110111100          


Q ss_pred             CCCCCCHHHHHHHHHHhccccCCCCCCCCC-----HHHHHH
Q 043709          199 LQTEASYPILKRYSNVDLFCFRENATDRPT-----MLEIVS  234 (253)
Q Consensus       199 ~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs-----~~~il~  234 (253)
                       ....+...+..+.+++.+||..||.+|||     ++|+++
T Consensus       252 -~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         252 -EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             -CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             -CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence             01112234567888999999999999995     788885

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.5e-30  Score=211.34  Aligned_cols=209  Identities=15%  Similarity=0.109  Sum_probs=128.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG------  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~------  102 (253)
                      .++|++++.||+|+||+|++    .+++.||||+++..  .....+.+.+|+.+|+.++|||||++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            46899999999999999665    56899999999754  3344568999999999999999999999997654      


Q ss_pred             eeEEEEeeCCCCChhhhccCCCCcCCCCccceeee---------------------------------------------
Q 043709          103 VKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI---------------------------------------------  137 (253)
Q Consensus       103 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i---------------------------------------------  137 (253)
                      .+++||||| +++|..+++...    ++......+                                             
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~~----l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~  171 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHEK----LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA  171 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             eEEEEEecc-cccHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceecc
Confidence            479999999 457776662211    111111111                                             


Q ss_pred             -----------------ee-ecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcC-----------
Q 043709          138 -----------------YA-LHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWND-----------  188 (253)
Q Consensus       138 -----------------~~-~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~-----------  188 (253)
                                       .+ ....++.++||||+||++|||++|+.||.......  ............           
T Consensus       172 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  249 (346)
T d1cm8a_         172 DSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD--QLKEIMKVTGTPPAEFVQRLQSD  249 (346)
T ss_dssp             CSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             CCccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH--HHHHHHhccCCCcHHHHhhhcch
Confidence                             11 22457899999999999999999999987543211  111000000000           


Q ss_pred             ------CCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--HhhcccCCCCCCCCCC
Q 043709          189 ------GSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNEIVNLPYPQQSAF  251 (253)
Q Consensus       189 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~~~~~~~~~~~~~  251 (253)
                            ..........+ ..........+.+|+.+||..||++|||++|+++.  |+++......|..+.+
T Consensus       250 ~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~~~~~~~~~  319 (346)
T d1cm8a_         250 EAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQVQKY  319 (346)
T ss_dssp             HHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC------CCCCC
T ss_pred             hhhhhhccCCcccccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCccccccCCCC
Confidence                  00000000000 11112234567789999999999999999999974  7766655445554444

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.7e-31  Score=207.11  Aligned_cols=174  Identities=18%  Similarity=0.261  Sum_probs=124.0

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccccc------ccHHHHHHHHHHHHhcc--CCCcceEeEEEEecC
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSG------QGLEEFKNEMMLIAKLQ--DINLVRIIGCCVEKG  102 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--H~nIv~~~~~~~~~~  102 (253)
                      .++|++.+.||+|+||.|++    .+++.||||++.....      ....++.+|+.+|++++  |||||++++++.+.+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            35799999999999999654    5789999999975421      12234778999999996  999999999999999


Q ss_pred             eeEEEEeeCCC-CChhhhccCCCCcCCCCcccee-------------------------------------ee-------
Q 043709          103 VKILIYEHMPN-KSLDYFLFDPANKGRLGWGTRV-------------------------------------RI-------  137 (253)
Q Consensus       103 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~~-------------------------------------~i-------  137 (253)
                      ..++||||+.+ +++.+++....   .+++....                                     .+       
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~~---~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITERG---ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA  159 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eEEEEEEeccCcchHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccce
Confidence            99999999975 57766662211   01111100                                     00       


Q ss_pred             --------------------eeecCc-cccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCCcccccc
Q 043709          138 --------------------YALHGV-FSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 --------------------~~~~~~-~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (253)
                                          ...... ++.++||||+||++|||++|..||.....        +    ....       
T Consensus       160 ~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--------i----~~~~-------  220 (273)
T d1xwsa_         160 LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--------I----IRGQ-------  220 (273)
T ss_dssp             ECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--------H----HHCC-------
T ss_pred             ecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--------H----hhcc-------
Confidence                                122233 46789999999999999999999863210        0    0000       


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                      ...    ....+..+.+++.+||..||++|||++|+++
T Consensus       221 ~~~----~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         221 VFF----RQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             CCC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cCC----CCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            001    1123457888999999999999999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.3e-30  Score=208.10  Aligned_cols=198  Identities=17%  Similarity=0.063  Sum_probs=125.8

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCCcceEeEEEEec------CeeEE
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK------GVKIL  106 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~------~~~~l  106 (253)
                      +|+.++.||+|+||+|++    .+++.||||++......    ..+|+.+|++++||||+++++++...      ..+++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS----CCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH----HHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            688889999999999665    57899999999764322    34799999999999999999998643      34899


Q ss_pred             EEeeCCCCChhhhccCCCCcCCCCccceee-------------------------------------e------------
Q 043709          107 IYEHMPNKSLDYFLFDPANKGRLGWGTRVR-------------------------------------I------------  137 (253)
Q Consensus       107 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~-------------------------------------i------------  137 (253)
                      |||||++|.+..+.........+++.....                                     +            
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~  176 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  176 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCC
Confidence            999998764433321000011111111110                                     1            


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHh----------hh----
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWN----------LW----  186 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~----------~~----  186 (253)
                                       ......|+.++||||+||++|||++|..||......  .....+...          ..    
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~--~~l~~i~~~~g~~~~~~~~~~~~~~  254 (350)
T d1q5ka_         177 EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV--DQLVEIIKVLGTPTREQIREMNPNY  254 (350)
T ss_dssp             SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH--HHHHHHHHHHCCCCHHHHHHHCC--
T ss_pred             cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH--HHHHHHHHHhCCChHHhhhhhccch
Confidence                             122346899999999999999999999998654321  111111000          00    


Q ss_pred             cCCCccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcc
Q 043709          187 NDGSLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEI  240 (253)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~  240 (253)
                      ........................+.+|+.+||..||++|||+.|+++  .|+++.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         255 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             -CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             hhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence            001111111111111112234456888999999999999999999995  466554

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.4e-29  Score=203.17  Aligned_cols=205  Identities=13%  Similarity=0.104  Sum_probs=128.5

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe--------
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE--------  100 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~--------  100 (253)
                      .++|++++.||+|+||+|++    .+++.||||++...  .....+.+.+|+.+|+.++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            36899999999999999655    56899999998654  34456789999999999999999999999865        


Q ss_pred             cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee-------------------------------------------
Q 043709          101 KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI-------------------------------------------  137 (253)
Q Consensus       101 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i-------------------------------------------  137 (253)
                      .+.++++||||.++++..+......   ........+                                           
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~~~~~---~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTCTTCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CceEEEEEeccCCCccchhhhcccc---cccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceee
Confidence            3468999999998777655421110   000000000                                           


Q ss_pred             --------------------------e-eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhh--cC
Q 043709          138 --------------------------Y-ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLW--ND  188 (253)
Q Consensus       138 --------------------------~-~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~--~~  188 (253)
                                                . .....|+.++||||+||++|||++|..||.....  ............  ..
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~  243 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSITP  243 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCT
T ss_pred             ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCH--HHHHHHHHHhcCCCCh
Confidence                                      1 1233588999999999999999999999864332  111111101110  00


Q ss_pred             CCcccc--------ccccCCCCCC-HH------HHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCC
Q 043709          189 GSLWDL--------MDPMLQTEAS-YP------ILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYP  246 (253)
Q Consensus       189 ~~~~~~--------~~~~~~~~~~-~~------~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~  246 (253)
                      ......        .......... ..      ....+++|+.+||+.||++|||++|+++  +...++.|.|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~--Hpff~~~p~p  314 (318)
T d3blha1         244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN--HDFFWSDPMP  314 (318)
T ss_dssp             TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH--SGGGSSSSCC
T ss_pred             hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc--ChhhccCCCC
Confidence            000000        0000000111 11      1235678999999999999999999985  2333344444

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8e-30  Score=204.84  Aligned_cols=196  Identities=20%  Similarity=0.223  Sum_probs=125.7

Q ss_pred             hcCccccCccccccccceEe----eC-CCEEEEEEeccc--ccccHHHHHHHHHHHHhc---cCCCcceEeEEEEe----
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LN-GEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKL---QDINLVRIIGCCVE----  100 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~-~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l---~H~nIv~~~~~~~~----  100 (253)
                      .++|++++.||+|+||+|++    .+ ++.||||+++..  .......+.+|+.+|+.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            46899999999999999665    23 567999999754  223334577888887766   79999999999863    


Q ss_pred             -cCeeEEEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------
Q 043709          101 -KGVKILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------  137 (253)
Q Consensus       101 -~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------  137 (253)
                       ...++++|||+.+|++.........  .+++.....+                                          
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~  163 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEP--GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  163 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTT--CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             cCceEEEEEEeccCCchhhhhhccCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhh
Confidence             3468999999998777544321110  0111111101                                          


Q ss_pred             ----------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC------
Q 043709          138 ----------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG------  189 (253)
Q Consensus       138 ----------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~------  189 (253)
                                            .+....|+.++||||+||++|||++|..||.....  ......+........      
T Consensus       164 ~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~  241 (305)
T d1blxa_         164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPGEEDWPR  241 (305)
T ss_dssp             CCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCGGGSCT
T ss_pred             hhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCH--HHHHHHHHHhhCCCchhcccc
Confidence                                  34556799999999999999999999999865432  111111111110000      


Q ss_pred             --Ccccccc----ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          190 --SLWDLMD----PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       190 --~~~~~~~----~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        .......    ..............+.+|+.+||+.||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence              0000000    00001112233456788999999999999999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-29  Score=207.00  Aligned_cols=210  Identities=14%  Similarity=0.118  Sum_probs=137.6

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEec-----Ce
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEK-----GV  103 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~-----~~  103 (253)
                      .++|++++.||+|+||+|++    .+++.||||+++..  +....+.+.+|+.+|+.++|||||++++++...     ..
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            45799999999999999655    56899999999754  334456789999999999999999999998643     34


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      .+++|+|+.+|+|.+++....    ++......+                                              
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~----l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQK----LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD  172 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred             eEEEEEeecCCchhhhccccc----ccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccC
Confidence            567778888999999984321    222211111                                              


Q ss_pred             -----------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCC-----------
Q 043709          138 -----------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDG-----------  189 (253)
Q Consensus       138 -----------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----------  189 (253)
                                       ......++.++||||+||++|+|++|..||......  .....+........           
T Consensus       173 ~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~  250 (348)
T d2gfsa1         173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLILRLVGTPGAELLKKISSES  250 (348)
T ss_dssp             GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCHHHHTTCCCHH
T ss_pred             cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCChHHhhhccchh
Confidence                             122234688999999999999999999998654321  11111100000000           


Q ss_pred             ------CccccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHhhcccCCCCCCCCCC
Q 043709          190 ------SLWDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLSNEIVNLPYPQQSAF  251 (253)
Q Consensus       190 ------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~~~~~~~~~~~~~~~  251 (253)
                            .........+ ..........+.+|+.+||..||.+|||++|+++  .|++.....+.|..++|
T Consensus       251 ~~~~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~~~~~~~~~  319 (348)
T d2gfsa1         251 ARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPY  319 (348)
T ss_dssp             HHHHHTTSCCCCCCCH-HHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTTSCCCCCCC
T ss_pred             hhhhhhhcccCCCcch-hhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCCccCCCCCCC
Confidence                  0000000000 0000123456788999999999999999999996  57666544444444443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=8.8e-29  Score=197.46  Aligned_cols=204  Identities=16%  Similarity=0.129  Sum_probs=144.2

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEEEEe
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKILIYE  109 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~lv~e  109 (253)
                      .++|++.+.||+|+||.+++    .+++.||||++....  ..+.+.+|++.++.+. |+||+.+++++..+...++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            36799999999999999665    568899999986542  2235778999999996 4999999999999999999999


Q ss_pred             eCCCCChhhhccCCCCcCCCCccce-----------------------------------------eee-----------
Q 043709          110 HMPNKSLDYFLFDPANKGRLGWGTR-----------------------------------------VRI-----------  137 (253)
Q Consensus       110 ~~~~g~L~~~l~~~~~~~~~~~~~~-----------------------------------------~~i-----------  137 (253)
                      |+ +|+|.+++......  +.....                                         +.+           
T Consensus        82 ~~-~~~l~~~~~~~~~~--~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          82 LL-GPSLEDLLDLCGRK--FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             CC-CCBHHHHHHHTTTC--CCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             ec-CCCHHHHHHhhccc--hhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence            99 57998887321110  000000                                         000           


Q ss_pred             -------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcc-hhhhhhHhhhcCCCc
Q 043709          138 -------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLT-LLGYVIWNLWNDGSL  191 (253)
Q Consensus       138 -------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~  191 (253)
                                               ...+..++.++|||||||++|||++|..||......... ....+ .........
T Consensus       159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i-~~~~~~~~~  237 (293)
T d1csna_         159 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI-GEKKQSTPL  237 (293)
T ss_dssp             TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH-HHHHHHSCH
T ss_pred             CccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHH-HhccCCCCh
Confidence                                     233445889999999999999999999999755443221 11111 111100111


Q ss_pred             cccccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          192 WDLMDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                      .     .+..    .++..+.+++..||..+|++||+++.+.+.|+++++.......-+|+|
T Consensus       238 ~-----~l~~----~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~~~~~~~~Dw  290 (293)
T d1csna_         238 R-----ELCA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDW  290 (293)
T ss_dssp             H-----HHTT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGG
T ss_pred             H-----HhcC----CCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            1     1111    223567788888999999999999999999999988877777777877

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.95  E-value=2.5e-28  Score=197.97  Aligned_cols=196  Identities=18%  Similarity=0.249  Sum_probs=129.4

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEec--CeeEEEE
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEK--GVKILIY  108 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~--~~~~lv~  108 (253)
                      ++|++++.||+|+||+|++    .+++.||||+++.   ...+++.+|+.+|+.++ ||||+++++++...  ..+++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~---~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---SCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECH---HHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            5799999999999999666    5789999999975   34567899999999995 99999999999743  5699999


Q ss_pred             eeCCCCChhhhccCCC----------------------------CcCC------------CCccceeee-----------
Q 043709          109 EHMPNKSLDYFLFDPA----------------------------NKGR------------LGWGTRVRI-----------  137 (253)
Q Consensus       109 e~~~~g~L~~~l~~~~----------------------------~~~~------------~~~~~~~~i-----------  137 (253)
                      |||.+|+|..+.+.-.                            +...            .++.....+           
T Consensus       112 e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~  191 (328)
T d3bqca1         112 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA  191 (328)
T ss_dssp             ECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCS
T ss_pred             eecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCccccccc
Confidence            9999999987752100                            0000            000000000           


Q ss_pred             ---------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhh----------HhhhcCCC---cccc-
Q 043709          138 ---------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVI----------WNLWNDGS---LWDL-  194 (253)
Q Consensus       138 ---------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~----------~~~~~~~~---~~~~-  194 (253)
                               ......++.++||||+||++||+++|+.||...............          ........   .... 
T Consensus       192 t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (328)
T d3bqca1         192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL  271 (328)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTC
T ss_pred             CccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhc
Confidence                     122334789999999999999999999998755433211111000          00000000   0000 


Q ss_pred             -------ccccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          195 -------MDPMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       195 -------~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                             ................+.+|+.+||..||.+|||++|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         272 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                   0011111122234467888999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.2e-28  Score=200.27  Aligned_cols=191  Identities=15%  Similarity=0.098  Sum_probs=126.9

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEeccc--ccccHHHHHHHHHHHHhccCCCcceEeEEEEe------cCe
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ--SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVE------KGV  103 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~------~~~  103 (253)
                      ++|++++.||+|+||+|++    .+|+.||||++...  +....+++.+|+.+++.++||||+++++++..      .+.
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            5799999999999999655    56999999999754  34445678999999999999999999999964      367


Q ss_pred             eEEEEeeCCCCChhhhccCCCCcCCCCccceeee----------------------------------------------
Q 043709          104 KILIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI----------------------------------------------  137 (253)
Q Consensus       104 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i----------------------------------------------  137 (253)
                      +|+|||||.++.+..+. ..     ++......+                                              
T Consensus        97 ~~iv~Ey~~~~l~~~~~-~~-----~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQ-ME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_dssp             EEEEEECCSEEHHHHHT-SC-----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             eEEEEeccchHHHHhhh-cC-----CCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccc
Confidence            89999999876555443 10     000000000                                              


Q ss_pred             ------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhH----------------
Q 043709          138 ------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIW----------------  183 (253)
Q Consensus       138 ------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~----------------  183 (253)
                                        .+.+..++.++||||+||++|||++|+.||.......  ....+..                
T Consensus       171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~  248 (355)
T d2b1pa1         171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID--QWNKVIEQLGTPCPEFMKKLQPT  248 (355)
T ss_dssp             ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCCCCHHHHTTSCHH
T ss_pred             cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHH--HHHHHHHhccCCCHHHHHHhhhh
Confidence                              2345668999999999999999999999986443210  0000000                


Q ss_pred             --hhhcC------CCccccccccCCC---CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH
Q 043709          184 --NLWND------GSLWDLMDPMLQT---EASYPILKRYSNVDLFCFRENATDRPTMLEIVS  234 (253)
Q Consensus       184 --~~~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~  234 (253)
                        .....      .............   .........+.+|+.+||..||++|||++|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence              00000      0001111111111   111234667889999999999999999999984

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.3e-29  Score=205.35  Aligned_cols=200  Identities=15%  Similarity=0.106  Sum_probs=126.5

Q ss_pred             hcCccccCccccccccceEe----eCCCEEEEEEeccc-ccccHHHHHHHHHHHHhccCCCcceEeEEEEecC----eeE
Q 043709           35 TDNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQ-SGQGLEEFKNEMMLIAKLQDINLVRIIGCCVEKG----VKI  105 (253)
Q Consensus        35 ~~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~~~~~~~~~~----~~~  105 (253)
                      +++|++++.||+|+||+|++    .+++.||||+++.. .....+.+.+|+.+|+.++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            35799999999999999655    57999999999754 3444568899999999999999999999997653    234


Q ss_pred             EEEeeCCCCChhhhccCCCCcCCCCccceeee------------------------------------------------
Q 043709          106 LIYEHMPNKSLDYFLFDPANKGRLGWGTRVRI------------------------------------------------  137 (253)
Q Consensus       106 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i------------------------------------------------  137 (253)
                      ++++|+.+|+|.+++....    +++.....+                                                
T Consensus        87 ~l~~~~~~g~L~~~l~~~~----l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~  162 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQH----LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD  162 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGG
T ss_pred             EEEEeecCCchhhhhhcCC----CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCC
Confidence            5556677899999983211    111111111                                                


Q ss_pred             --------------------e-eecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchhhhhhHhhhcCCC------
Q 043709          138 --------------------Y-ALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLLGYVIWNLWNDGS------  190 (253)
Q Consensus       138 --------------------~-~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~~~~~~~~~~~~~------  190 (253)
                                          . .....++.++||||+||++|||++|+.||........  .............      
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~  240 (345)
T d1pmea_         163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ--LNHILGILGSPSQEDLNCI  240 (345)
T ss_dssp             GCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHTC
T ss_pred             CccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHH--HHHHhhhccCCChhhhhhh
Confidence                                1 1334578899999999999999999999865432111  0000000000000      


Q ss_pred             ----ccccc--cccCCC----CCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHH--Hhhcc
Q 043709          191 ----LWDLM--DPMLQT----EASYPILKRYSNVDLFCFRENATDRPTMLEIVSM--LSNEI  240 (253)
Q Consensus       191 ----~~~~~--~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~--L~~~~  240 (253)
                          .....  .+....    .........+.+++.+||..||.+|||++++++.  |+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~  302 (345)
T d1pmea_         241 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY  302 (345)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCC
Confidence                00000  000000    0011223467889999999999999999999963  44443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=2.2e-28  Score=195.85  Aligned_cols=205  Identities=16%  Similarity=0.159  Sum_probs=129.6

Q ss_pred             cCccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhccCCC-cceEeEEEEecCeeEEEEee
Q 043709           36 DNFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQDIN-LVRIIGCCVEKGVKILIYEH  110 (253)
Q Consensus        36 ~~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~~~~~~~~~~~~~lv~e~  110 (253)
                      ++|++.+.||+|+||.|++    .+++.||||++....  ..+.+..|+.+++.++|+| |+.+.++....+..++||||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~   84 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   84 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEE
Confidence            4699999999999999665    468899999987542  2235789999999997665 55555666777889999999


Q ss_pred             CCCCChhhhccCCC--------------------------------CcCC--------------CCccceeee-------
Q 043709          111 MPNKSLDYFLFDPA--------------------------------NKGR--------------LGWGTRVRI-------  137 (253)
Q Consensus       111 ~~~g~L~~~l~~~~--------------------------------~~~~--------------~~~~~~~~i-------  137 (253)
                      +. |++...+....                                +...              .++.....+       
T Consensus        85 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~  163 (299)
T d1ckia_          85 LG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ  163 (299)
T ss_dssp             CC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCC
T ss_pred             cC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecccccccc
Confidence            96 45555441100                                0000              000000000       


Q ss_pred             --------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCcchh-hhhhHhhhcCCCcccccc
Q 043709          138 --------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSLTLL-GYVIWNLWNDGSLWDLMD  196 (253)
Q Consensus       138 --------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  196 (253)
                                          ...+..++.++|||||||++|||++|..||........... ... .......     ..
T Consensus       164 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~-~~~~~~~-----~~  237 (299)
T d1ckia_         164 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI-SEKKMST-----PI  237 (299)
T ss_dssp             BCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHH-HHHHHHS-----CH
T ss_pred             ceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHh-hcccCCC-----Ch
Confidence                                22344588999999999999999999999976544322111 111 0000000     00


Q ss_pred             ccCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHHHHhhcccCCCCCCCCCCCC
Q 043709          197 PMLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVSMLSNEIVNLPYPQQSAFLY  253 (253)
Q Consensus       197 ~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~~L~~~~~~~~~~~~~~~~~  253 (253)
                      +..    ...++..+.+++..||+.+|++||+++++.+.|+...........-+|+|
T Consensus       238 ~~~----~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~~~~~~~~Dw  290 (299)
T d1ckia_         238 EVL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDW  290 (299)
T ss_dssp             HHH----TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTCCCSCCCHH
T ss_pred             hHh----ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcCCCCCCCcCc
Confidence            111    11233567888889999999999999999999988764433333334443

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=9.8e-24  Score=172.92  Aligned_cols=213  Identities=15%  Similarity=0.141  Sum_probs=126.8

Q ss_pred             CccccCccccccccceEe----eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-----------CCCcceEeEEEEec
Q 043709           37 NFSMENKLGEGGFGPGKL----LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-----------DINLVRIIGCCVEK  101 (253)
Q Consensus        37 ~~~~~~~ig~G~fg~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~~~~~~~~~  101 (253)
                      +|++++.||+|+||+|++    .+++.||||+++.. ....+.+.+|+.+++.++           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~-~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc-ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            499999999999999665    57899999999854 233467788998888775           57899999888643


Q ss_pred             --CeeEEEEeeCCCCChhhhc----------------------------cC-------CCCcCCCCcc--------ceee
Q 043709          102 --GVKILIYEHMPNKSLDYFL----------------------------FD-------PANKGRLGWG--------TRVR  136 (253)
Q Consensus       102 --~~~~lv~e~~~~g~L~~~l----------------------------~~-------~~~~~~~~~~--------~~~~  136 (253)
                        ...+++++++..+......                            ++       .-+...+-..        ..+.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k  172 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK  172 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence              5667777777654432221                            10       0000000000        0000


Q ss_pred             e--------------------------eeecCccccccceeehhHHHHHHHhCCCCcCcCCCCCc-chhhh---hhHhh-
Q 043709          137 I--------------------------YALHGVFSIKSDVFSFGVLLLETLSSKKNAHFYNTNSL-TLLGY---VIWNL-  185 (253)
Q Consensus       137 i--------------------------~~~~~~~~~~~DiwSlG~~l~ell~~~~p~~~~~~~~~-~~~~~---~~~~~-  185 (253)
                      +                          ......|+.++||||+||+++||++|+.||........ .....   ..... 
T Consensus       173 l~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg  252 (362)
T d1q8ya_         173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG  252 (362)
T ss_dssp             ECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred             EeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhC
Confidence            0                          23345688999999999999999999999875543211 00000   00000 


Q ss_pred             ----------------hcCCCccccccc----------cCCCCCCHHHHHHHHHHhccccCCCCCCCCCHHHHHH--HHh
Q 043709          186 ----------------WNDGSLWDLMDP----------MLQTEASYPILKRYSNVDLFCFRENATDRPTMLEIVS--MLS  237 (253)
Q Consensus       186 ----------------~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~~il~--~L~  237 (253)
                                      ............          .............+.+|+.+||..||.+|||++|+++  .|+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~  332 (362)
T d1q8ya_         253 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK  332 (362)
T ss_dssp             SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred             CCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccC
Confidence                            000000000000          0112233556778999999999999999999999996  366


Q ss_pred             hcc--cCCCCCCCCC
Q 043709          238 NEI--VNLPYPQQSA  250 (253)
Q Consensus       238 ~~~--~~~~~~~~~~  250 (253)
                      +..  .+...|..|.
T Consensus       333 ~~~~~~~~~~p~~~~  347 (362)
T d1q8ya_         333 DTLGMEEIRVPDREL  347 (362)
T ss_dssp             TCTTCTTCCCTTSCT
T ss_pred             CCCCcccCCCCCccc
Confidence            543  3444555543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.43  E-value=1.8e-07  Score=68.05  Aligned_cols=77  Identities=17%  Similarity=0.121  Sum_probs=55.8

Q ss_pred             ccccCccccccccceEe---eCCCEEEEEEeccccc------------------ccHHHHHHHHHHHHhccCCCcceEeE
Q 043709           38 FSMENKLGEGGFGPGKL---LNGEQVAVKRLSSQSG------------------QGLEEFKNEMMLIAKLQDINLVRIIG   96 (253)
Q Consensus        38 ~~~~~~ig~G~fg~~~~---~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~nIv~~~~   96 (253)
                      +.+++.||+|+||.++.   .+|+.||||+++....                  ........|...+..+.|++++..++
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            35678999999999665   5688999998763210                  01123456888999999999999886


Q ss_pred             EEEecCeeEEEEeeCCCCChhh
Q 043709           97 CCVEKGVKILIYEHMPNKSLDY  118 (253)
Q Consensus        97 ~~~~~~~~~lv~e~~~~g~L~~  118 (253)
                      +..    .+++|||++++.+..
T Consensus        82 ~~~----~~lvme~~~~~~~~~   99 (191)
T d1zara2          82 WEG----NAVLMELIDAKELYR   99 (191)
T ss_dssp             EET----TEEEEECCCCEEGGG
T ss_pred             ecC----CEEEEEeeccccccc
Confidence            532    379999999765544

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.24  E-value=0.038  Score=40.74  Aligned_cols=91  Identities=8%  Similarity=-0.001  Sum_probs=62.9

Q ss_pred             HHHHHhcCccccCccccccccceEe--eCCCEEEEEEecccccccHHHHHHHHHHHHhcc-CCCcceEeEEEEecCeeEE
Q 043709           30 SISAATDNFSMENKLGEGGFGPGKL--LNGEQVAVKRLSSQSGQGLEEFKNEMMLIAKLQ-DINLVRIIGCCVEKGVKIL  106 (253)
Q Consensus        30 ~l~~~~~~~~~~~~ig~G~fg~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~~~~~~~~~~~~~l  106 (253)
                      ++...-+.|++.+..+-++-+.++.  ..+..+.+|+...........+.+|..++..+. +--+.+++.+..+++..++
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~l   87 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEE
Confidence            4555566777666543333334443  456778899887554444456788988888774 4446777888888889999


Q ss_pred             EEeeCCCCChhhhc
Q 043709          107 IYEHMPNKSLDYFL  120 (253)
Q Consensus       107 v~e~~~~g~L~~~l  120 (253)
                      ||++.+|.++....
T Consensus        88 v~~~l~G~~~~~~~  101 (263)
T d1j7la_          88 LMSEADGVLCSEEY  101 (263)
T ss_dssp             EEECCSSEEHHHHT
T ss_pred             EEEecccccccccc
Confidence            99999998886654