BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043713
(190 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22778|ATPO_IPOBA ATP synthase subunit O, mitochondrial OS=Ipomoea batatas PE=1 SV=1
Length = 244
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 138/187 (73%), Positives = 166/187 (88%)
Query: 1 VPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETR 60
VPL ++G SGNYASALY+AAVK+N LEKVESE+ DLVEASKK+ T+ QF +D SVP +TR
Sbjct: 58 VPLTMYGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSVPVDTR 117
Query: 61 VNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIP 120
VNAI EIC QAKF D T++FL++LAENGRL+++D I KRF ELTMAH+GEVK TVT+VIP
Sbjct: 118 VNAIKEICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIP 177
Query: 121 LPPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERF 180
LP +EEKELK TLQE +GQGK V++EQK+DP+ILGGLVVEFGQKVFDMSI++RARQMERF
Sbjct: 178 LPADEEKELKATLQEMVGQGKSVQIEQKIDPTILGGLVVEFGQKVFDMSIRTRARQMERF 237
Query: 181 LREPIHF 187
LREP++F
Sbjct: 238 LREPLNF 244
>sp|Q96251|ATPO_ARATH ATP synthase subunit O, mitochondrial OS=Arabidopsis thaliana
GN=At5g13450 PE=1 SV=2
Length = 238
Score = 258 bits (659), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/190 (63%), Positives = 155/190 (81%)
Query: 1 VPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETR 60
VP+AL G +GN+AS LYIAAVK N+LEK+E+++ +++EA K A + QFTKD SVP TR
Sbjct: 49 VPIALVGENGNFASWLYIAAVKMNSLEKIETDLSEMIEAMKTAPIFAQFTKDPSVPRGTR 108
Query: 61 VNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIP 120
+ AI + C QAKF++ TK+FL +LAENG+L+NLD I K+F++LT AH+G+VKV VT+VIP
Sbjct: 109 LAAIRDACDQAKFAEPTKNFLSLLAENGKLKNLDAIVKKFMQLTNAHRGDVKVLVTTVIP 168
Query: 121 LPPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERF 180
LPP EEKEL ETLQE +G GKK+ VEQK+DPSI GGL+VEF QKV DMSI++RA+QMER
Sbjct: 169 LPPAEEKELTETLQEIIGAGKKITVEQKIDPSIYGGLIVEFQQKVLDMSIRTRAQQMERL 228
Query: 181 LREPIHFGTL 190
LREP+ F L
Sbjct: 229 LREPVDFNNL 238
>sp|Q5RD23|ATPO_PONAB ATP synthase subunit O, mitochondrial OS=Pongo abelii GN=ATP5O PE=2
SV=1
Length = 213
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 109/182 (59%), Gaps = 1/182 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K N LE+VE E+L + + K+ V +V
Sbjct: 31 PVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAAPVLNPY-VKRSIKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++N+I + +FS +T + + +LAENGRL N + F + AH+GEV TVTS PL
Sbjct: 90 KSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSAHRGEVPCTVTSASPL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK L+ L QG+ +K+E K DPSILGG++V G+K DMS+K++ +++ R +
Sbjct: 150 EEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLSRAM 209
Query: 182 RE 183
RE
Sbjct: 210 RE 211
>sp|P48047|ATPO_HUMAN ATP synthase subunit O, mitochondrial OS=Homo sapiens GN=ATP5O PE=1
SV=1
Length = 213
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 108/182 (59%), Gaps = 1/182 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K N LE+VE E+L + + K+ V +V
Sbjct: 31 PVQVYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASVLNPY-VKRSIKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++N+I + +FS +T + + +LAENGRL N + F + H+GEV TVTS PL
Sbjct: 90 KSLNDITAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTSASPL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK L+ L QG+ +K+E K DPSILGG++V G+K DMS+K++ +++ R +
Sbjct: 150 EEATLSELKTVLKSFLSQGQVLKLEAKTDPSILGGMIVRIGEKYVDMSVKTKIQKLGRAM 209
Query: 182 RE 183
RE
Sbjct: 210 RE 211
>sp|B2B9A1|ATPO_RHIFE ATP synthase subunit O, mitochondrial OS=Rhinolophus ferrumequinum
GN=ATP5O PE=3 SV=1
Length = 213
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K N LE+VE E+L + + K+ + +V
Sbjct: 31 PVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQLLKEPKMAASIMNPY-IKRSIKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++N++ T+ KFS +T + + +LAENGRL N + F + H+GEV +VT+ PL
Sbjct: 90 KSLNDMTTKEKFSPLTSNLMNLLAENGRLNNTPGVISAFSTIMSVHRGEVPCSVTTASPL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK LQ L + + +K+E K DPSI+GG+++ G+K DMS K++ +++ R +
Sbjct: 150 DEATLSELKTVLQSFLSKNQILKLEVKTDPSIMGGMIIRIGEKYVDMSAKTKIQKLSRVM 209
Query: 182 RE 183
RE
Sbjct: 210 RE 211
>sp|Q2EN81|ATPO_PIG ATP synthase subunit O, mitochondrial OS=Sus scrofa GN=ATP5O PE=1
SV=1
Length = 213
Score = 125 bits (314), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 108/182 (59%), Gaps = 1/182 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K N LE+VE E+L + + K+ V +V
Sbjct: 31 PVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVAQILKEPKVAASIMNPY-VKRSVKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
+++++ + KFS +T + + +LAENGRL + + F + H+GEV +VT+ PL
Sbjct: 90 KSLSDMTAKEKFSPLTSNLINLLAENGRLSSTPGVISAFSTMMSVHRGEVPCSVTTASPL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK L+ L +G+ +K+E KVDPSI+GG++V G+K DMS K++ +++ R +
Sbjct: 150 DEATLTELKTVLKSFLSKGQILKLEVKVDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAM 209
Query: 182 RE 183
RE
Sbjct: 210 RE 211
>sp|B0VXH3|ATPO_CALJA ATP synthase subunit O, mitochondrial OS=Callithrix jacchus
GN=ATP5O PE=3 SV=1
Length = 213
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K LE+VE E+L + + K+ V +V
Sbjct: 31 PVQVYGVEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPKVAASVLNPY-VKHSIKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++++I + +FS +T + + +LAENGRL N + F + H+GEV TVT+ PL
Sbjct: 90 KSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTTASPL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK L+ L QG+ +K+E K DPSI+GG++V G+K DMS K++ +++ + +
Sbjct: 150 EEATLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAM 209
Query: 182 REPI 185
RE I
Sbjct: 210 REVI 213
>sp|B1MT69|ATPO_CALMO ATP synthase subunit O, mitochondrial OS=Callicebus moloch GN=ATP5O
PE=3 SV=1
Length = 213
Score = 124 bits (312), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K LE+VE E+L + + K+ V +V
Sbjct: 31 PVQVYGIEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPKVAASVLNPY-VKHSVKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++++I + +FS +T + + +LAENGRL N + F + H+GE+ TVT+ PL
Sbjct: 90 KSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEIPCTVTTASPL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK L+ L QG+ +K+E K DPSI+GG++V G+K DMS K++ +++ + +
Sbjct: 150 EETTLSELKTVLKSFLSQGQILKLEVKTDPSIMGGMIVRIGEKYVDMSAKTKIQKLSKAM 209
Query: 182 REPI 185
RE I
Sbjct: 210 REVI 213
>sp|P13621|ATPO_BOVIN ATP synthase subunit O, mitochondrial OS=Bos taurus GN=ATP5O PE=1
SV=2
Length = 213
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K N LE+VE E+L + + K+ V +V
Sbjct: 31 PVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKMAASLLNPY-VKRSVKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
+++++ + KFS +T + + +LAENGRL N + F + H+GEV TVT+ L
Sbjct: 90 KSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTVTTASAL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK L+ L +G+ +K+E K+DPSI+GG++V G+K DMS K++ +++ R +
Sbjct: 150 DEATLTELKTVLKSFLSKGQVLKLEVKIDPSIMGGMIVRIGEKYVDMSAKTKIQKLSRAM 209
Query: 182 RE 183
RE
Sbjct: 210 RE 211
>sp|B3EX21|ATPO_SORAR ATP synthase subunit O, mitochondrial OS=Sorex araneus GN=ATP5O
PE=3 SV=1
Length = 213
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 105/182 (57%), Gaps = 1/182 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K N L++VE E+L + + K+ + V +V
Sbjct: 31 PIQIYGVEGRYATALYSAASKQNKLDQVEKELLRVAQLLKEPKLAASIL-NPHVKRAIKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
+I ++ + K S +T + + +LAENGRL N I F + H+GEV TVT+ L
Sbjct: 90 KSIGDLTAREKLSPITTNLINLLAENGRLNNTPGIISAFSTMMSVHRGEVPCTVTTASAL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
P ELK LQ L + + +K+E K DPSI+GG++V G+K DMS +++ +++ + +
Sbjct: 150 PEATLSELKTVLQSFLSKNQVLKLEVKTDPSIMGGMIVRIGEKYVDMSARTKIQKLSKAM 209
Query: 182 RE 183
RE
Sbjct: 210 RE 211
>sp|Q06647|ATPO_RAT ATP synthase subunit O, mitochondrial OS=Rattus norvegicus GN=Atp5o
PE=1 SV=1
Length = 213
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 1/182 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K L++VE E+L + + K + +V
Sbjct: 31 PVQVYGIEGRYATALYSAASKQKRLDQVEKELLRVGQLLKDPKVSLAVLNPY-IKRSIKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++ +I T+ KFS +T + + +LAENGRL N + F + H+GEV TVT+ PL
Sbjct: 90 KSLKDITTKEKFSPLTANLMNLLAENGRLGNTQGVISAFSTIMSVHRGEVPCTVTTAFPL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK L L +G+ + +E K DPSI+GG++V G+K DMS KS+ +++ + +
Sbjct: 150 DEAVLSELKTVLNSFLSKGQILNLEVKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSKAM 209
Query: 182 RE 183
R+
Sbjct: 210 RD 211
>sp|Q9DB20|ATPO_MOUSE ATP synthase subunit O, mitochondrial OS=Mus musculus GN=Atp5o PE=1
SV=1
Length = 213
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 103/182 (56%), Gaps = 1/182 (0%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ ++G G YA+ALY AA K L++VE E+L + + K + +V
Sbjct: 31 PVQVYGIEGRYATALYSAASKEKKLDQVEKELLRVGQLLKDPKVSLAVLNPY-IKRTVKV 89
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++N+I + KFS +T + + +LAENGRL N I F + H+GEV TVT+ PL
Sbjct: 90 KSLNDITKREKFSPLTANLMNLLAENGRLGNTQGIISAFSTIMSVHRGEVPCTVTTASPL 149
Query: 122 PPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
ELK L+ L + +K+E K DPSI+GG++V G+K DMS KS+ +++ + +
Sbjct: 150 DDAVLSELKTVLKSFLSPNQILKLEIKTDPSIMGGMIVRIGEKYVDMSAKSKIQKLSKAM 209
Query: 182 RE 183
RE
Sbjct: 210 RE 211
>sp|Q9P602|ATPO_NEUCR ATP synthase subunit 5, mitochondrial OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=atp-5 PE=3 SV=2
Length = 220
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 112/190 (58%), Gaps = 9/190 (4%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALE---KVESEILDLVEASKKADTYFQFTKDLSVPAE 58
P+ LFG G YA+ALY AAVKT+ALE K S + +L+ K + + T LS PA+
Sbjct: 34 PVTLFGLDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILE-TPTLS-PAD 91
Query: 59 TRVNAINEICTQAKFSDVT-KHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTS 117
+ + E+ S+ T K+FL LAEN RL L ++ +F EL A +GEV++ VTS
Sbjct: 92 -KSAIVAELQKSVGVSNETVKNFLATLAENNRLGLLPSVVAKFSELMSAARGEVEMVVTS 150
Query: 118 VIPLPPEEEKELKETLQET--LGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRAR 175
PL + L+ + ++ +G GKK+KV KV+ I+GGLVVE G++ D+S+ S+
Sbjct: 151 AQPLDNKTLNRLESAVAKSPYVGSGKKLKVTNKVNADIIGGLVVEIGERTIDLSVSSKIA 210
Query: 176 QMERFLREPI 185
+M + L E +
Sbjct: 211 KMNKLLSEAL 220
>sp|Q24439|ATPO_DROME ATP synthase subunit O, mitochondrial OS=Drosophila melanogaster
GN=Oscp PE=2 SV=2
Length = 209
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYF-QFTKDLSVPAETR 60
P+ +FG G YA+ALY AA K + L++VE ++ L +A+ ++D ++ + +
Sbjct: 26 PVQVFGLEGRYATALYSAASKLSQLDQVEKDLTAL-QATIRSDKKLREYVTSPIINKKVM 84
Query: 61 VNAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIP 120
A+ E + +F+ T + L +LA+NGRL+ LDT+ + + AH+GEV V + P
Sbjct: 85 ATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINAYKTIMAAHRGEVVCEVVTAKP 144
Query: 121 LPPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRAR 175
L + K+L+ L+ L + +K+ +VDPSI+GGL+V G K DMSI ++ +
Sbjct: 145 LDASQSKQLEGALKSFLKGNESLKITSRVDPSIIGGLIVSIGDKYVDMSIATKVK 199
>sp|O74190|ATPO_KLULA ATP synthase subunit 5, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ATP5 PE=3 SV=2
Length = 206
Score = 107 bits (266), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 103/186 (55%), Gaps = 2/186 (1%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ LFG G YA+AL+ AA KT ++E S + L E K ++ ++ AE R
Sbjct: 21 PVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKDTKLTSILENPALSAEDRN 80
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++ + + ++ L VLAEN RL L+ + +F +LT A+ G V+ TVT+ PL
Sbjct: 81 IVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKLTDAYHGLVQATVTTAQPL 140
Query: 122 PPEEEKELKETLQET--LGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMER 179
+ K +++ L + +G+GK +K+E V P I GGL+VE + D+SI SR ++ +
Sbjct: 141 DSKLFKRVEKALAASSLVGKGKSLKLENVVKPEIQGGLIVEVSDRTVDLSIASRINKLNQ 200
Query: 180 FLREPI 185
LRE I
Sbjct: 201 VLREAI 206
>sp|Q75EZ3|ATPO_ASHGO ATP synthase subunit 5, mitochondrial OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=ATP5 PE=3 SV=1
Length = 207
Score = 103 bits (258), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 3/187 (1%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ LFG G YASAL+ AA KT ++E + L + K + ++PA R
Sbjct: 21 PIQLFGLEGTYASALFTAASKTTSIESAGKALASLSKTIAKDAKLGAILANPALPAGDRT 80
Query: 62 NAINEICTQAKFSDVT-KHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIP 120
+ + + D ++ + VLAEN RL L +A F +LT AH G V+ TVT+ P
Sbjct: 81 VVVQTLAQKTPGMDAAVQNLMQVLAENNRLNLLQGVAGEFTKLTDAHNGLVQATVTTAQP 140
Query: 121 LPPEEEKELKETLQET--LGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQME 178
L + + +++ L ++ +G GK +K+E V P I GGL+VE + D+SI SR ++
Sbjct: 141 LEGKLFRRVEKALAQSSFIGAGKTLKLENVVKPEIQGGLIVEVADRTVDLSIASRISKLN 200
Query: 179 RFLREPI 185
+ L+E I
Sbjct: 201 QVLKESI 207
>sp|O74479|ATPO_SCHPO ATP synthase subunit 5, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=atp5 PE=3 SV=2
Length = 216
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ L+G G+YAS+LY AAVK + L+ VE + L ++ + Q+ + E +
Sbjct: 33 PVQLYGLDGSYASSLYTAAVKESKLDNVEKALNKLSGVLQQRPEFEQYISSPWLTREDKK 92
Query: 62 NAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPL 121
++ + + K+F VL +N RL L I K+F L A +GE++V +TS PL
Sbjct: 93 ILVSSLTQMTGNEPLLKNFYNVLLDNHRLYLLTRIQKQFSTLMRAKRGEIEVKITSATPL 152
Query: 122 PPEEEKELKETLQET-LGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERF 180
+ L+ + ++ G+GK + V KV PSI+GGL+VE G + D+S+ SR + +
Sbjct: 153 DSKILSRLESRIAKSKYGKGKLL-VSNKVTPSIIGGLIVEIGDNILDVSVGSRLNNLNKL 211
Query: 181 LREPI 185
L EPI
Sbjct: 212 LSEPI 216
>sp|P09457|ATPO_YEAST ATP synthase subunit 5, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ATP5 PE=1 SV=1
Length = 212
Score = 100 bits (249), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 99/187 (52%), Gaps = 3/187 (1%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ LFG G YA+ALY AA K ++++ + + KK + ++ + R
Sbjct: 26 PVRLFGVEGTYATALYQAAAKNSSIDAAFQSLQKVESTVKKNPKLGHLLLNPALSLKDRN 85
Query: 62 NAINEIC-TQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIP 120
+ I+ I T + L VL+EN RL + IA F L AH G +K TVTS P
Sbjct: 86 SVIDAIVETHKNLDGYVVNLLKVLSENNRLGCFEKIASDFGVLNDAHNGLLKGTVTSAEP 145
Query: 121 LPPEEEKELKETLQET--LGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQME 178
L P+ K +++ L + +GQGK +K+E V P I GGL+VE G K D+SI ++ +++
Sbjct: 146 LDPKSFKRIEKALSASKLVGQGKSLKLENVVKPEIKGGLIVELGDKTVDLSISTKIQKLN 205
Query: 179 RFLREPI 185
+ L + I
Sbjct: 206 KVLEDSI 212
>sp|Q6FSD5|ATPO_CANGA ATP synthase subunit 5, mitochondrial OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=ATP5 PE=3 SV=1
Length = 207
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 3/187 (1%)
Query: 2 PLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRV 61
P+ LFG G YASAL+ AA K ++E S ++ L K+ ++ ++ + R
Sbjct: 21 PVKLFGVEGTYASALFTAASKETSVESASSSLVKLSSLIKEDAKLKHIMENPALSTKDRA 80
Query: 62 NAINEIC-TQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIP 120
++ + + A + L VLAEN +L D I+ +F L AH G ++ +VT+ P
Sbjct: 81 VVVDSLVKSSANLDKPVVNLLKVLAENNKLGLFDKISSQFSILNDAHNGLIRGSVTTAQP 140
Query: 121 LPPEEEKELKETLQET--LGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQME 178
L + K L++ LQ++ +GQ K +K++ V P I GGL+VE G + D+S+ S+ +++
Sbjct: 141 LDSKNFKRLEKALQQSSLVGQQKTLKLDNVVKPDIKGGLIVEVGDQTIDLSVSSKIQKLN 200
Query: 179 RFLREPI 185
+ L E I
Sbjct: 201 KVLEETI 207
>sp|Q4FP35|ATPD_PELUB ATP synthase subunit delta OS=Pelagibacter ubique (strain HTCC1062)
GN=atpH PE=3 SV=1
Length = 185
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 97/180 (53%), Gaps = 8/180 (4%)
Query: 8 GSGNYASALYIAAVKTNALEKVE---SEILDLVEASKKADTYFQFTKDLSVPAETRVNAI 64
+G Y+ ALY AV+ N L ++E + I++L+ +S + + KD + E ++NA+
Sbjct: 11 SAGRYSLALYELAVEANNLNEIEVHSASIINLITSS---EDFKSLIKDPTNNKEDQLNAL 67
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
++I Q K +++ FL L R +D I K FVE +GE+K +TS L
Sbjct: 68 SKISEQYKLNELLTKFLSFLISKRRFFYVDKILKSFVETCSVKRGELKAELTSAKDLTEN 127
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLREP 184
E +KE L + K+K+ K D S++GGL+V+ G + D SIK++ +Q+E + E
Sbjct: 128 EINNIKEELTKNFSS--KIKLNYKHDASLIGGLIVQVGSTMVDTSIKNKLQQIENRMIEA 185
>sp|Q7CWL8|ATPD_AGRT5 ATP synthase subunit delta OS=Agrobacterium tumefaciens (strain C58
/ ATCC 33970) GN=atpH PE=3 SV=3
Length = 188
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 5/180 (2%)
Query: 7 GGSG---NYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNA 63
G SG YAS+L+ A++ +E V+ E+ ++D + AE + A
Sbjct: 9 GTSGVAERYASSLFELALEAGTVEAVQVELDKFGALLDESDDLKRLVASPVFSAEDQFKA 68
Query: 64 INEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPP 123
I+ IC +A + + +FL V+A N RL + + + + + AH+GE+ VTS L
Sbjct: 69 ISAICEKAGIAGLAVNFLKVVANNRRLFAVPGMIRAYRTIAAAHRGEITAEVTSAHALDE 128
Query: 124 EEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
+E ELK L+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 129 AQETELKAALKSV--TGKDVAISVTVDPSILGGLIVKVGSRQIDTSLRTKLSTLKLALKE 186
>sp|Q9A2V6|ATPD_CAUCR ATP synthase subunit delta OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=atpH PE=3 SV=1
Length = 184
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 11 NYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQ 70
YA +L+ ++ +L+KVE+++ L + + + AE + + + +
Sbjct: 13 RYAQSLFELTIENGSLQKVEADLKSLKAMVADSADLRRLIASPAFSAEDKGKGLTAVAKK 72
Query: 71 AKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKELK 130
A F +T FL ++A NGR +L FVEL+ H+G V V S L P + K ++
Sbjct: 73 AGFQPLTTKFLGLVAANGRTGDLLGAISAFVELSAKHRGVVTAEVVSAAALSPAQLKGVQ 132
Query: 131 ETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSR 173
L + L GK +V +VDPS+LGGL V G ++FD S++S+
Sbjct: 133 TALAQAL--GKTPEVSTRVDPSLLGGLKVRVGSRLFDASLRSK 173
>sp|B8H5I3|ATPD_CAUCN ATP synthase subunit delta OS=Caulobacter crescentus (strain NA1000
/ CB15N) GN=atpH PE=3 SV=2
Length = 184
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 11 NYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQ 70
YA +L+ ++ +L+KVE+++ L + + + AE + + + +
Sbjct: 13 RYAQSLFELTIENGSLQKVEADLKSLKAMVADSADLRRLIASPAFSAEDKGKGLTAVAKK 72
Query: 71 AKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKELK 130
A F +T FL ++A NGR +L FVEL+ H+G V V S L P + K ++
Sbjct: 73 AGFQPLTTKFLGLVAANGRTGDLLGAISAFVELSAKHRGVVTAEVVSAAALSPAQLKGVQ 132
Query: 131 ETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSR 173
L + L GK +V +VDPS+LGGL V G ++FD S++S+
Sbjct: 133 TALAQAL--GKTPEVSTRVDPSLLGGLKVRVGSRLFDASLRSK 173
>sp|Q2N8Z6|ATPD_ERYLH ATP synthase subunit delta OS=Erythrobacter litoralis (strain
HTCC2594) GN=atpH PE=3 SV=2
Length = 184
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Query: 9 SGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEIC 68
+G YASAL+ A + + VES++ L A ++D T + + + + +AI +
Sbjct: 12 AGRYASALFELAAEEGVVTAVESDLDKLHAALGESDDLKAVTNNPEISRKDQASAIEGVA 71
Query: 69 TQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKE 128
S +T FL LA N RL L + + F + A +GEV V S PL ++ +
Sbjct: 72 GVLGLSPLTTKFLGTLAANRRLSKLGDMIRAFRTIAAAQRGEVTADVVSAHPLKDDQLES 131
Query: 129 LKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSR 173
LK L T +G+ VK+ VDP +LGGLVV G K D SI++R
Sbjct: 132 LKTKL--TAREGRTVKLSPTVDPDLLGGLVVTIGSKRIDGSIRTR 174
>sp|Q11DD8|ATPD_MESSB ATP synthase subunit delta OS=Mesorhizobium sp. (strain BNC1)
GN=atpH PE=3 SV=2
Length = 186
Score = 86.3 bits (212), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 97/177 (54%), Gaps = 2/177 (1%)
Query: 7 GGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINE 66
G +G YA +L+ A +T A+ VE +++ E + ++ + K A+ ++ A+
Sbjct: 10 GVAGRYARSLFELAQETGAVSVVEGDLVRFEEMLEGSEDLKRLIKSPVFSADEQLKALGA 69
Query: 67 ICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEE 126
+ +A+ S + +FL ++A N RL + + + F E+ +GE VTS L E+E
Sbjct: 70 VLDRARISGLVGNFLRLVARNRRLFAVPQMIRAFREIAAEARGETAAEVTSAHALSAEQE 129
Query: 127 KELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
+ELK L+ + GK V V+ VDPS+L GL+V+ G + D S+K++ ++ L+E
Sbjct: 130 RELKAALKSVV--GKDVTVKVTVDPSLLAGLIVKVGSRQIDTSLKTKLNSLKLALKE 184
>sp|A5V3X2|ATPD_SPHWW ATP synthase subunit delta OS=Sphingomonas wittichii (strain RW1 /
DSM 6014 / JCM 10273) GN=atpH PE=3 SV=1
Length = 184
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 2/165 (1%)
Query: 9 SGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEIC 68
SG YA+AL+ A A++ V + + L A ++D + + T V + + A+
Sbjct: 12 SGRYATALFGLARDEKAIDAVSASLQSLKAALTESDDFRRLTTSPLVSRDEAMKAVAATA 71
Query: 69 TQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKE 128
+T FL VLA+N RL L + + F L+ H+GE VTS PL + K
Sbjct: 72 ASLGIDPLTTKFLGVLAQNRRLGQLGAVIRSFGTLSARHRGETTAEVTSAHPLTATQVKA 131
Query: 129 LKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSR 173
LK L+ L + V V+ VDPSILGGL+V+ G + D SI+S+
Sbjct: 132 LKAKLKTQL--DRDVAVDLTVDPSILGGLIVKIGSRQIDGSIRSK 174
>sp|B9L1H2|ATPD_THERP ATP synthase subunit delta OS=Thermomicrobium roseum (strain ATCC
27502 / DSM 5159 / P-2) GN=atpH PE=3 SV=1
Length = 180
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
Query: 3 LALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVN 62
+A+ G + YA A + A + L+ E + DL EA + +F ++ ++P E +V
Sbjct: 1 MAVAGVAKRYAQAAFAVAKEHGQLDFWEQRLTDL-EALARDSAVEEFIQNPAIPLEAKVQ 59
Query: 63 AINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLP 122
I+ + + + ++ LV+L E GR L + F EL H+G + V + + +PL
Sbjct: 60 VIDRLFPGDE-NRYVRNLLVLLLERGRWHQLRDVVVAFRELLREHRGVIDVELVTAVPLE 118
Query: 123 PEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFL 181
P E + L+ L + L + V++ VDP +LGG+V++ G +VFD S++++ + R L
Sbjct: 119 PSEVERLRRELAQRL--SRPVELRTTVDPELLGGVVLKIGDEVFDASVRTQLTNLRRQL 175
>sp|B2ICI8|ATPD_BEII9 ATP synthase subunit delta OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=atpH PE=3
SV=1
Length = 190
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 7 GGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINE 66
G +G YA AL+ A ++ +++V S++ L E ++++ +F + +E +V +N
Sbjct: 13 GMAGRYAQALFSLAKESGTIDQVASDLQRLREIYRESEDLQRFIGSPAFSSEIQVKVLNA 72
Query: 67 ICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEE 126
+ + + + + +F+ ++A RL L + F L G V+ TVTS PL E+
Sbjct: 73 LLNKVEITGLAANFIKLVAFKRRLFGLPKMIDDFNHLRDVEYGIVRATVTSAAPLKDEQL 132
Query: 127 KELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
+ LK L G GK V++ KVDP+++GGL+V+ G ++ D S+K++ + ++E
Sbjct: 133 ETLKGVLAAQ-GGGKSVEIAAKVDPALIGGLIVQLGSRMVDGSLKTKLNAIRTRMKE 188
>sp|B9JBZ8|ATPD_AGRRK ATP synthase subunit delta OS=Agrobacterium radiobacter (strain K84
/ ATCC BAA-868) GN=atpH PE=3 SV=2
Length = 188
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 8/175 (4%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVP---AETRVNAINEIC 68
YAS+L+ A++ A+ V ++ LD +A D + +S P AE +V A+ +
Sbjct: 17 YASSLFELALEEGAVPAVTAD-LDRFQA--MLDDSGDLKRFISSPVFSAEEQVGAVQALA 73
Query: 69 TQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKE 128
T+A F +FL V+A+N RL L + K F + H+GEV +TS L +E E
Sbjct: 74 TKAGFGAYFTNFLKVVAKNRRLFALPGMVKAFRIIAAQHRGEVSAEITSAHALTKAQENE 133
Query: 129 LKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
LK L+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 134 LKAALKGV--TGKDVAIAVTVDPSILGGLIVKVGSRQIDTSLRTKLSTLKLALKE 186
>sp|Q8FYR2|ATPD_BRUSU ATP synthase subunit delta OS=Brucella suis biovar 1 (strain 1330)
GN=atpH PE=3 SV=1
Length = 186
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDL----SVP---AETRVNAI 64
YA +L+ A+ N++ VE ++ + + +KDL S P +E +++AI
Sbjct: 15 YAGSLFELALDANSVASVEKDL-------GRFEALLSGSKDLRRLISSPVFSSEDQLHAI 67
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A + +FL V+A+N RL L I F ++ H+GE+ V S L
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
++ ELK TL+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 128 QQNELKATLKGV--AGKDVTINVTVDPSILGGLIVKMGSRQIDTSLRTKLSSLKLALKE 184
>sp|A6UDM4|ATPD_SINMW ATP synthase subunit delta OS=Sinorhizobium medicae (strain WSM419)
GN=atpH PE=3 SV=1
Length = 188
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVP---AETRVNAINEIC 68
YAS+L+ A++ ++E V + DL D + + P A+ + AI+ +
Sbjct: 17 YASSLFELALEAGSIEAVGA---DLTRIQALIDGSADLKRLIVSPVFSADDQYKAISALV 73
Query: 69 TQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKE 128
+ S + +FL V+A N RL L I + F L HKGE+ VTS L P +E E
Sbjct: 74 EKFGVSGLVGNFLKVVARNRRLFVLPGIIRAFRLLAARHKGEITADVTSAHALTPAQETE 133
Query: 129 LKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
LK L+ GK V V VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 134 LKAALKGV--TGKDVAVNVTVDPSILGGLIVKVGSRQIDTSLRTKLSTLKLALKE 186
>sp|Q92LK5|ATPD_RHIME ATP synthase subunit delta OS=Rhizobium meliloti (strain 1021)
GN=atpH PE=3 SV=2
Length = 188
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQA 71
YAS+L+ A+ ++E V +++ + +D + A+ + AI+ + +
Sbjct: 17 YASSLFELALDAGSIEAVGADLTRIQALIDGSDDLKRLIVSPVFSADDQFKAISALVEKF 76
Query: 72 KFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKELKE 131
FS + +FL V+A N RL L I K F L HKGE+ VTS L +E ELK
Sbjct: 77 GFSGLVGNFLKVVARNRRLFVLPGIIKAFRLLAARHKGEITADVTSAHALTLAQEIELKA 136
Query: 132 TLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
L+ GK V V VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 137 ALKGV--TGKDVAVNVTVDPSILGGLIVKVGSRQIDTSLRTKLSTLKLALKE 186
>sp|Q2K3G7|ATPD_RHIEC ATP synthase subunit delta OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=atpH PE=3 SV=2
Length = 188
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 97/180 (53%), Gaps = 8/180 (4%)
Query: 7 GGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVP---AETRVNA 63
G + YAS+L+ A++ A++ V ++ LD +A D + + ++ P AE ++ A
Sbjct: 12 GVAERYASSLFELALEQGAVDSVTAD-LDRFQA--MLDESAELKRFVASPVFSAEDQLKA 68
Query: 64 INEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPP 123
I I +A S +FL V+A N RL L + K F + H+GE+ VTS L
Sbjct: 69 IIAISERAGISGFFANFLKVVARNRRLFALPGMIKAFRVIAANHRGEISAEVTSAHALTA 128
Query: 124 EEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
E+E ELK L+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 129 EQENELKAALKGV--TGKDVAIAVTVDPSILGGLIVKVGSRQIDTSLRTKLSTLKLALKE 186
>sp|Q2VZM9|ATPD_MAGSA ATP synthase subunit delta OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=atpH PE=3 SV=1
Length = 184
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 2/167 (1%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQA 71
YA+AL+ A + +L++V ++ L +++ + + + AI+ + A
Sbjct: 13 YATALFELADSSGSLDQVAGDLKTLQAMLRESADLRRVVDSPVLSRNDQGKAISAVAKAA 72
Query: 72 KFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKELKE 131
FS++T FL + A+N RL L + ++ A +GE TV S + L P ++ L
Sbjct: 73 GFSELTNKFLGLAAQNRRLHTLSGVIASYLGRLAARRGEKSATVASAVALSPAQQDALTT 132
Query: 132 TLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQME 178
L+ G V V+ KVDPS+LGGLVV+ G ++ D S+K++ + ++
Sbjct: 133 ALKAAF--GGNVAVDVKVDPSLLGGLVVQVGSRMVDSSLKTKLQHLK 177
>sp|A7IH28|ATPD_XANP2 ATP synthase subunit delta OS=Xanthobacter autotrophicus (strain
ATCC BAA-1158 / Py2) GN=atpH PE=3 SV=1
Length = 201
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 7 GGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINE 66
G +G YA+AL+ A + A++ V++++ L ++ + K AE ++ AI+
Sbjct: 25 GMAGRYATALFELATEAGAVDSVKADLDRLSALIAESADLARLVKSPVFSAEEQLKAISA 84
Query: 67 ICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEE 126
+ QA S + +F+ +A+N RL L + + L A +GE VT PL
Sbjct: 85 VLDQAGISGLAGNFVRRVAQNRRLFALPRMVADYASLVAAMRGETTAQVTVPAPLSDAHF 144
Query: 127 KELKETL-QETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
LK+ L Q+T GK V ++ VDPSILGGL+V+ G ++ D S+K++ + ++E
Sbjct: 145 FALKDALAQQT---GKDVILDVTVDPSILGGLIVKLGSRMVDASLKTKLNSIRHAMKE 199
>sp|A9WWS5|ATPD_BRUSI ATP synthase subunit delta OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=atpH PE=3 SV=1
Length = 186
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDL----SVP---AETRVNAI 64
YA +L+ A+ N++ VE ++ + + ++DL S P +E +++AI
Sbjct: 15 YAGSLFELALDANSVASVEKDL-------GRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A + +FL V+A+N RL L I F ++ H+GE+ V S L
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
++ ELK TL+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 128 QQNELKATLKGV--AGKDVTINVTVDPSILGGLIVKMGSRQIDTSLRTKLSSLKLALKE 184
>sp|A5VSE4|ATPD_BRUO2 ATP synthase subunit delta OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=atpH PE=3 SV=1
Length = 186
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDL----SVP---AETRVNAI 64
YA +L+ A+ N++ VE ++ + + ++DL S P +E +++AI
Sbjct: 15 YAGSLFELALDANSVASVEKDL-------GRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A + +FL V+A+N RL L I F ++ H+GE+ V S L
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
++ ELK TL+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 128 QQNELKATLKGV--AGKDVTINVTVDPSILGGLIVKMGSRQIDTSLRTKLSSLKLALKE 184
>sp|A9M840|ATPD_BRUC2 ATP synthase subunit delta OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=atpH PE=3 SV=1
Length = 186
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDL----SVP---AETRVNAI 64
YA +L+ A+ N++ VE ++ + + ++DL S P +E +++AI
Sbjct: 15 YAGSLFELALDANSVASVEKDL-------GRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A + +FL V+A+N RL L I F ++ H+GE+ V S L
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
++ ELK TL+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 128 QQNELKATLKGV--AGKDVTINVTVDPSILGGLIVKMGSRQIDTSLRTKLSSLKLALKE 184
>sp|Q57B85|ATPD_BRUAB ATP synthase subunit delta OS=Brucella abortus biovar 1 (strain
9-941) GN=atpH PE=3 SV=1
Length = 186
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDL----SVP---AETRVNAI 64
YA +L+ A+ N++ VE ++ + + ++DL S P +E +++AI
Sbjct: 15 YAGSLFEHALDANSVASVEKDL-------GRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A + +FL V+A+N RL L I F ++ H+GE+ V S L
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
++ ELK TL+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 128 QQNELKATLKGV--AGKDVTINVTVDPSILGGLIVKMGSRQIDTSLRTKLSSLKLALKE 184
>sp|Q2YLI4|ATPD_BRUA2 ATP synthase subunit delta OS=Brucella abortus (strain 2308)
GN=atpH PE=3 SV=1
Length = 186
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDL----SVP---AETRVNAI 64
YA +L+ A+ N++ VE ++ + + ++DL S P +E +++AI
Sbjct: 15 YAGSLFEHALDANSVASVEKDL-------GRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A + +FL V+A+N RL L I F ++ H+GE+ V S L
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
++ ELK TL+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 128 QQNELKATLKGV--AGKDVTINVTVDPSILGGLIVKMGSRQIDTSLRTKLSSLKLALKE 184
>sp|B2S7M6|ATPD_BRUA1 ATP synthase subunit delta OS=Brucella abortus (strain S19) GN=atpH
PE=3 SV=1
Length = 186
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDL----SVP---AETRVNAI 64
YA +L+ A+ N++ VE ++ + + ++DL S P +E +++AI
Sbjct: 15 YAGSLFEHALDANSVASVEKDL-------GRFEALLSGSEDLRRLISSPVFSSEDQLHAI 67
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A + +FL V+A+N RL L I F ++ H+GE+ V S L
Sbjct: 68 GAIADKAGIKGLVGNFLRVVAQNRRLFALPGIIAAFRQIAAEHRGEISADVVSAHELTSA 127
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
++ ELK TL+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 128 QQNELKATLKGV--AGKDVTINVTVDPSILGGLIVKMGSRQIDTSLRTKLSSLKLALKE 184
>sp|B4RD44|ATPD_PHEZH ATP synthase subunit delta OS=Phenylobacterium zucineum (strain
HLK1) GN=atpH PE=3 SV=1
Length = 184
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 11 NYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQ 70
YA AL+ A + + VE+++ L A + + A+ + ++ I +
Sbjct: 13 RYAQALFDLASEQKEVPAVEADLKSLKAAIADSRDLRVLLASPAFGADDKRKGLSAIADK 72
Query: 71 AKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKELK 130
AKF TK FL +LA NGR L + F L +G V VT+ +PL + K L
Sbjct: 73 AKFKPTTKKFLGLLAANGRAAALPEVISAFERLAAEARGAVSAEVTTALPLSSAQAKGLA 132
Query: 131 ETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSR 173
+ L++ L GK ++ +VDP++LGG+ V+ G ++FD S++S+
Sbjct: 133 QALRQAL--GKDPEITTRVDPALLGGIKVKVGSRLFDASLRSK 173
>sp|B5ZSP0|ATPD_RHILW ATP synthase subunit delta OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=atpH PE=3 SV=1
Length = 188
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 6/179 (3%)
Query: 7 GGSGNYASALYIAAVKTNALEKVESEILDLVEA--SKKADTYFQFTKDLSVPAETRVNAI 64
G + YAS+L+ A++ A++ V ++ LD +A + AD +F AE ++ AI
Sbjct: 12 GVAERYASSLFDLALEQGAVDSVTAD-LDRFQAMLDESADLK-RFVASPVFSAEDQLKAI 69
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A S +FL V+A N RL L + K F + H+GE+ VTS L
Sbjct: 70 VAISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAHALSQA 129
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
+E ELK L+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 130 QETELKVALKSV--TGKDVTIAVTVDPSILGGLIVKVGSRQIDTSLRTKLSTLKLALKE 186
>sp|C3M9S4|ATPD_RHISN ATP synthase subunit delta OS=Rhizobium sp. (strain NGR234) GN=atpH
PE=3 SV=1
Length = 188
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 16/179 (8%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLS-------VPAETRVNAI 64
YAS+L+ A++ ++E V ++ LD V+A ++DL A+ + AI
Sbjct: 17 YASSLFELALEAGSVEAVGAD-LDRVQA------LIDGSEDLKRLVVSPVFSADDQFKAI 69
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
+ + + FS + +FL V+A N RL L K F + H+GE+ VTS L
Sbjct: 70 SALVEKFGFSGLVGNFLKVVARNRRLFALPGSIKAFRLIAARHRGEITADVTSAHALTAA 129
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
+E ELK TL+ GK V V VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 130 QETELKATLKGV--TGKDVAVNVTVDPSILGGLIVKVGSRQIDTSLRTKLSTLKLALKE 186
>sp|C0Z779|ATPD_BREBN ATP synthase subunit delta OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=atpH PE=3 SV=1
Length = 175
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQA 71
YA AL+ A + + +++VE+++ +VEA + + + + A+ + +E+ ++
Sbjct: 9 YARALFEVASERSKIDQVEADLGAIVEAVEGNEDLKKIMLHPHIAADAKATLADELF-KS 67
Query: 72 KFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKELKE 131
+ +FL VL ENGR +L I + FV+L +G VTS PL EE+ EL E
Sbjct: 68 HVGEEAFNFLNVLIENGREVDLVDIYRSFVQLANEARGFADAIVTSAKPLSTEEQNELAE 127
Query: 132 TLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSR 173
+TL KK+++ VDP+ILGG++++ G +++D S+K++
Sbjct: 128 KFGQTL--NKKLRMTAVVDPAILGGVIIKIGDRLYDGSLKTK 167
>sp|B9JTR5|ATPD_AGRVS ATP synthase subunit delta OS=Agrobacterium vitis (strain S4 / ATCC
BAA-846) GN=atpH PE=3 SV=1
Length = 193
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 8/175 (4%)
Query: 12 YASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPA---ETRVNAINEIC 68
YAS+L+ A + +++ V DL D + ++ PA E + +AI +C
Sbjct: 22 YASSLFELAREAGSVDAVAG---DLNRFQAMIDESVDLQRLVTSPAFTSEQQASAIAALC 78
Query: 69 TQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKE 128
+A+ + +FL ++A N RL + + F + H+GE+ VTS L P +E E
Sbjct: 79 DKAEIGGLVGNFLKLVAANRRLFAVPGMIAAFRMIAARHRGELAADVTSAHALTPAQETE 138
Query: 129 LKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
LKE L+ GK V + VDPS+LGGL+V+ G + D S++++ ++ L+E
Sbjct: 139 LKEALKS--ATGKTVTMFVTVDPSLLGGLIVKIGSRQIDTSLRTKLSTLKLALKE 191
>sp|Q1MAY9|ATPD_RHIL3 ATP synthase subunit delta OS=Rhizobium leguminosarum bv. viciae
(strain 3841) GN=atpH PE=3 SV=1
Length = 188
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 6/179 (3%)
Query: 7 GGSGNYASALYIAAVKTNALEKVESEILDLVEA--SKKADTYFQFTKDLSVPAETRVNAI 64
G + YAS+L+ A++ A++ V ++ LD +A + AD +F AE ++ AI
Sbjct: 12 GVAERYASSLFELALEQGAVDSVTAD-LDHFQAMLDESADLK-RFVASPVFSAEDQLKAI 69
Query: 65 NEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPE 124
I +A S +FL V+A N RL L + K F + H+GE+ VTS L
Sbjct: 70 VAISEKAGISGFFANFLKVVARNRRLFALPGMIKAFRIIAANHRGEISAEVTSAHALSQA 129
Query: 125 EEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLRE 183
+E ELK L+ GK V + VDPSILGGL+V+ G + D S++++ ++ L+E
Sbjct: 130 QETELKVALKGV--TGKDVTIAVTVDPSILGGLIVKVGSRQIDTSLRTKLSTLKLALKE 186
>sp|Q2G5N8|ATPD_NOVAD ATP synthase subunit delta OS=Novosphingobium aromaticivorans
(strain DSM 12444) GN=atpH PE=3 SV=2
Length = 184
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 9 SGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEIC 68
SG YASAL+ A + VE ++ L A +++ + + + A++ +
Sbjct: 12 SGRYASALFDLANDQGFVSAVEGDLEKLDAALRESADLKGLINNPQLGRDEAGRAMDAVA 71
Query: 69 TQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKE 128
++TK F+ VLA N RL L + + F ++ A +GEV VTS L +
Sbjct: 72 GLLGLGELTKKFVGVLAANRRLSALPDVIRAFGQIAAAQRGEVSAEVTSAHALDDAQVAA 131
Query: 129 LKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQMERFLR 182
L E L+ GK +K++ VDP ILGGLVV+ G ++ D SI++R + + ++
Sbjct: 132 LTEKLKAR--TGKSIKLKTSVDPEILGGLVVKIGSQMIDSSIRTRLNSLAQAMK 183
>sp|Q1GEU5|ATPD_RUEST ATP synthase subunit delta OS=Ruegeria sp. (strain TM1040) GN=atpH
PE=3 SV=2
Length = 186
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 2 PLALFGG-SGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETR 60
P ++ G + YA+A++ A ++NAL+ +E+ I DL + ++ V E +
Sbjct: 4 PASISAGIADRYATAIFEIAAESNALDNLETSINDLAASLADSEDLRTLITSPLVSREEQ 63
Query: 61 VNAINEICTQAKFSDVTKHFLVVLAENGRL----RNLDTIAKRFVELTMAHKGEVKVTVT 116
AI+ + + DV ++ L ++A RL +D + R E +GEV V
Sbjct: 64 AAAISAVADKMGLVDVLRNSLALMAAKRRLFVVPALIDALRARIAE----ARGEVTAEVV 119
Query: 117 SVIPLPPEEEKELKETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSRARQ 176
S L + ++L +TL E +G KKV + VD SI+GGLVV+ G K+ D SI+S+
Sbjct: 120 SAKALTKTQSEKLAKTLAERVG--KKVTINATVDASIIGGLVVKVGSKMIDSSIRSKLNS 177
Query: 177 MERFLRE 183
++ ++E
Sbjct: 178 LQNAMKE 184
>sp|Q1AVH6|ATPD_RUBXD ATP synthase subunit delta OS=Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129) GN=atpH PE=3 SV=1
Length = 179
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 11 NYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVNAINEICTQ 70
YA AL+ AA + + LE+V ++ + A ++++ F +P + AI E T+
Sbjct: 6 TYAEALFGAAREKDELERVLDDLREFCRALRESEELALFFYGEQIPEREKRRAI-EALTE 64
Query: 71 AKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTSVIPLPPEEEKELK 130
S +T +FL VL +N R L+ + +R+ E+ H G ++V V + L E ++ ++
Sbjct: 65 G-MSPLTTNFLKVLCDNRREEILEDVLRRYEEMVEDHLGRIEVEVVTATELSGEMQERIR 123
Query: 131 ETLQETLGQGKKVKVEQKVDPSILGGLVVEFGQKVFDMSIKSR 173
E + LG G++V + VDP ILGG V F ++ D SI+ R
Sbjct: 124 ERIARVLG-GREVILRTSVDPEILGGAVFRFKDRLVDSSIRGR 165
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,451,660
Number of Sequences: 539616
Number of extensions: 2447486
Number of successful extensions: 12912
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 11642
Number of HSP's gapped (non-prelim): 816
length of query: 190
length of database: 191,569,459
effective HSP length: 111
effective length of query: 79
effective length of database: 131,672,083
effective search space: 10402094557
effective search space used: 10402094557
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)