Query 043717
Match_columns 246
No_of_seqs 152 out of 1004
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 13:00:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043717.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043717hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 8.4E-28 2.9E-32 215.8 19.5 193 2-198 44-341 (342)
2 1yvv_A Amine oxidase, flavin-c 99.9 4E-21 1.4E-25 170.4 19.2 186 12-202 50-330 (336)
3 3nks_A Protoporphyrinogen oxid 99.8 5.6E-19 1.9E-23 164.3 13.7 145 48-198 249-473 (477)
4 3lov_A Protoporphyrinogen oxid 99.8 7.2E-19 2.5E-23 163.9 11.6 150 48-203 249-469 (475)
5 3i6d_A Protoporphyrinogen oxid 99.8 1.1E-18 3.8E-23 161.2 12.0 148 48-199 248-468 (470)
6 3ka7_A Oxidoreductase; structu 99.6 3.2E-15 1.1E-19 136.7 15.6 143 48-196 211-424 (425)
7 2ivd_A PPO, PPOX, protoporphyr 99.6 4.1E-15 1.4E-19 138.4 13.1 150 48-202 250-476 (478)
8 3nrn_A Uncharacterized protein 99.6 1.1E-14 3.7E-19 133.8 15.7 152 48-223 204-417 (421)
9 3kkj_A Amine oxidase, flavin-c 99.6 1.4E-13 4.7E-18 113.3 18.8 195 2-202 42-330 (336)
10 1sez_A Protoporphyrinogen oxid 99.6 6.1E-15 2.1E-19 138.3 9.6 151 48-202 256-496 (504)
11 2yg5_A Putrescine oxidase; oxi 99.4 1.1E-12 3.7E-17 121.2 9.9 148 48-199 227-451 (453)
12 1s3e_A Amine oxidase [flavin-c 99.4 4.9E-12 1.7E-16 119.4 12.7 152 48-201 227-456 (520)
13 1b37_A Protein (polyamine oxid 99.3 8.5E-12 2.9E-16 116.4 14.0 152 48-202 229-461 (472)
14 2vvm_A Monoamine oxidase N; FA 99.3 5.3E-12 1.8E-16 118.1 10.8 151 48-202 271-488 (495)
15 2jae_A L-amino acid oxidase; o 99.3 1.2E-11 4E-16 115.6 12.6 149 48-201 252-487 (489)
16 4gde_A UDP-galactopyranose mut 99.3 2.2E-12 7.5E-17 120.5 5.5 146 48-197 237-477 (513)
17 4dsg_A UDP-galactopyranose mut 99.3 5.6E-12 1.9E-16 118.8 8.2 141 49-196 230-452 (484)
18 2z3y_A Lysine-specific histone 99.3 9.4E-11 3.2E-15 114.6 16.9 149 48-200 411-659 (662)
19 2xag_A Lysine-specific histone 99.2 1.3E-10 4.6E-15 116.7 16.3 152 48-201 582-831 (852)
20 4gut_A Lysine-specific histone 99.2 2.7E-10 9.2E-15 113.4 15.1 147 48-197 544-775 (776)
21 2iid_A L-amino-acid oxidase; f 99.2 4.7E-10 1.6E-14 104.9 14.9 150 49-201 254-486 (498)
22 2b9w_A Putative aminooxidase; 99.1 1.2E-10 4E-15 106.6 8.7 140 49-196 219-423 (424)
23 4dgk_A Phytoene dehydrogenase; 99.0 5E-10 1.7E-14 104.5 8.1 48 48-95 236-285 (501)
24 3k7m_X 6-hydroxy-L-nicotine ox 98.7 1.5E-07 5.2E-12 85.8 11.6 142 49-198 219-425 (431)
25 1rsg_A FMS1 protein; FAD bindi 98.6 6.8E-07 2.3E-11 84.1 14.4 44 49-92 216-260 (516)
26 2e1m_C L-glutamate oxidase; L- 97.7 3E-05 1E-09 63.8 5.0 85 113-200 54-153 (181)
27 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00094 3.2E-08 65.9 8.7 50 165-220 643-694 (721)
28 1ryi_A Glycine oxidase; flavop 96.3 0.005 1.7E-07 54.5 6.0 142 48-197 179-361 (382)
29 2cul_A Glucose-inhibited divis 95.9 0.0021 7.3E-08 53.8 1.5 140 47-199 83-231 (232)
30 3f8d_A Thioredoxin reductase ( 95.6 0.042 1.4E-06 46.9 8.3 105 47-201 204-318 (323)
31 2bi7_A UDP-galactopyranose mut 95.4 0.012 4E-07 53.3 4.1 58 146-203 304-374 (384)
32 3itj_A Thioredoxin reductase 1 95.3 0.057 1.9E-06 46.4 8.4 106 47-201 223-336 (338)
33 3lzw_A Ferredoxin--NADP reduct 95.3 0.033 1.1E-06 47.8 6.7 105 48-202 204-317 (332)
34 3r9u_A Thioredoxin reductase; 95.0 0.11 3.9E-06 44.0 9.3 108 47-200 197-312 (315)
35 1trb_A Thioredoxin reductase; 94.6 0.2 6.8E-06 42.8 9.9 38 164-201 276-315 (320)
36 3vrd_B FCCB subunit, flavocyto 94.2 0.29 1E-05 43.5 10.4 107 46-201 215-325 (401)
37 1i8t_A UDP-galactopyranose mut 94.0 0.041 1.4E-06 49.3 4.2 52 146-197 301-365 (367)
38 1v0j_A UDP-galactopyranose mut 94.0 0.016 5.4E-07 52.6 1.4 37 167-203 353-391 (399)
39 2q7v_A Thioredoxin reductase; 93.8 0.24 8.3E-06 42.6 8.6 39 164-202 274-314 (325)
40 3ab1_A Ferredoxin--NADP reduct 93.8 0.46 1.6E-05 41.4 10.6 105 48-202 217-330 (360)
41 3nyc_A D-arginine dehydrogenas 93.4 0.078 2.7E-06 46.4 4.9 140 48-196 169-356 (381)
42 2zbw_A Thioredoxin reductase; 93.4 0.51 1.7E-05 40.5 10.0 106 47-202 205-319 (335)
43 3ihg_A RDME; flavoenzyme, anth 92.8 0.54 1.9E-05 43.8 10.0 139 48-199 135-339 (535)
44 3k30_A Histamine dehydrogenase 92.6 0.19 6.4E-06 48.8 6.7 91 48-200 582-675 (690)
45 3dme_A Conserved exported prot 92.5 0.13 4.3E-06 44.7 4.9 42 48-89 165-209 (369)
46 3ps9_A TRNA 5-methylaminomethy 92.4 0.14 4.8E-06 49.5 5.5 42 48-89 432-473 (676)
47 1y56_A Hypothetical protein PH 92.4 0.19 6.5E-06 46.7 6.2 106 48-200 272-377 (493)
48 3dje_A Fructosyl amine: oxygen 92.4 0.17 6E-06 45.6 5.8 47 48-95 176-226 (438)
49 3oz2_A Digeranylgeranylglycero 92.3 1.2 4.2E-05 38.5 11.0 38 166-203 276-319 (397)
50 3v76_A Flavoprotein; structura 91.9 0.2 6.7E-06 45.8 5.6 40 48-88 147-186 (417)
51 4a9w_A Monooxygenase; baeyer-v 91.5 0.18 6.2E-06 43.4 4.6 40 48-88 91-131 (357)
52 3pvc_A TRNA 5-methylaminomethy 91.5 0.16 5.6E-06 49.2 4.7 46 48-94 427-473 (689)
53 3fpz_A Thiazole biosynthetic e 91.4 0.07 2.4E-06 46.5 1.9 38 163-200 280-325 (326)
54 1d5t_A Guanine nucleotide diss 90.6 0.19 6.5E-06 45.9 4.1 42 48-89 249-290 (433)
55 2oln_A NIKD protein; flavoprot 90.5 0.29 9.9E-06 43.4 5.1 40 48-88 168-207 (397)
56 2uzz_A N-methyl-L-tryptophan o 90.5 0.22 7.7E-06 43.5 4.3 46 48-95 164-209 (372)
57 2gv8_A Monooxygenase; FMO, FAD 90.4 0.25 8.5E-06 45.0 4.6 41 48-88 130-176 (447)
58 2zbw_A Thioredoxin reductase; 90.1 0.35 1.2E-05 41.6 5.1 40 48-87 80-119 (335)
59 1y56_B Sarcosine oxidase; dehy 90.0 0.39 1.3E-05 42.1 5.4 143 48-198 164-355 (382)
60 2i0z_A NAD(FAD)-utilizing dehy 89.8 0.39 1.3E-05 43.8 5.5 40 48-87 149-189 (447)
61 2ywl_A Thioredoxin reductase r 89.7 0.28 9.5E-06 38.5 3.8 99 48-200 71-171 (180)
62 2gf3_A MSOX, monomeric sarcosi 89.6 0.34 1.2E-05 42.5 4.8 140 48-197 165-363 (389)
63 3d1c_A Flavin-containing putat 89.5 0.34 1.1E-05 42.2 4.6 40 48-88 103-142 (369)
64 2vou_A 2,6-dihydroxypyridine h 88.8 0.4 1.4E-05 42.8 4.6 41 48-88 112-152 (397)
65 2gqf_A Hypothetical protein HI 88.8 0.48 1.6E-05 42.9 5.2 39 48-87 124-166 (401)
66 3rp8_A Flavoprotein monooxygen 88.6 0.49 1.7E-05 42.2 5.1 41 48-88 140-180 (407)
67 3lzw_A Ferredoxin--NADP reduct 88.3 0.51 1.7E-05 40.1 4.8 40 47-87 81-121 (332)
68 2x3n_A Probable FAD-dependent 88.2 0.44 1.5E-05 42.3 4.5 48 47-94 122-172 (399)
69 2v3a_A Rubredoxin reductase; a 88.2 0.67 2.3E-05 41.1 5.7 99 48-197 202-305 (384)
70 2xdo_A TETX2 protein; tetracyc 88.2 0.45 1.6E-05 42.4 4.6 42 48-89 141-182 (398)
71 3s5w_A L-ornithine 5-monooxyge 87.4 0.67 2.3E-05 42.0 5.3 42 46-87 329-375 (463)
72 4ap3_A Steroid monooxygenase; 87.0 0.62 2.1E-05 44.1 4.9 38 49-86 117-156 (549)
73 2yqu_A 2-oxoglutarate dehydrog 87.0 0.83 2.8E-05 41.6 5.7 103 48-197 223-326 (455)
74 3gwf_A Cyclohexanone monooxyge 86.9 0.6 2.1E-05 44.1 4.8 39 49-87 105-145 (540)
75 3o0h_A Glutathione reductase; 86.9 0.72 2.5E-05 42.4 5.3 103 48-198 247-351 (484)
76 3fbs_A Oxidoreductase; structu 86.5 0.84 2.9E-05 38.1 5.1 39 164-202 255-294 (297)
77 1xdi_A RV3303C-LPDA; reductase 85.8 0.86 2.9E-05 42.1 5.2 102 48-197 238-341 (499)
78 1vdc_A NTR, NADPH dependent th 85.7 0.64 2.2E-05 39.8 4.0 44 164-207 285-330 (333)
79 3ab1_A Ferredoxin--NADP reduct 85.7 0.86 2.9E-05 39.7 4.9 40 48-87 89-129 (360)
80 3iwa_A FAD-dependent pyridine 85.4 0.97 3.3E-05 41.3 5.3 101 48-197 217-328 (472)
81 1w4x_A Phenylacetone monooxyge 85.3 0.86 2.9E-05 42.7 4.9 40 48-87 111-152 (542)
82 4a5l_A Thioredoxin reductase; 84.7 1.3 4.4E-05 37.5 5.4 39 163-201 273-313 (314)
83 3f8d_A Thioredoxin reductase ( 84.5 0.86 2.9E-05 38.5 4.2 40 48-88 85-124 (323)
84 3oc4_A Oxidoreductase, pyridin 84.4 1.2 4.2E-05 40.4 5.5 39 48-87 204-242 (452)
85 2xve_A Flavin-containing monoo 84.2 1 3.5E-05 41.4 4.8 38 50-87 120-164 (464)
86 3lxd_A FAD-dependent pyridine 84.2 1.4 4.7E-05 39.5 5.6 39 48-86 209-248 (415)
87 2r9z_A Glutathione amide reduc 84.2 1.4 4.9E-05 40.3 5.8 103 48-197 222-326 (463)
88 2bcg_G Secretory pathway GDP d 84.1 0.86 2.9E-05 41.7 4.3 32 165-196 407-438 (453)
89 3fbs_A Oxidoreductase; structu 84.0 1.4 4.6E-05 36.8 5.2 39 48-87 72-110 (297)
90 1m6i_A Programmed cell death p 84.0 1.4 4.9E-05 40.7 5.8 40 48-87 241-280 (493)
91 3klj_A NAD(FAD)-dependent dehy 83.9 0.97 3.3E-05 40.5 4.5 39 47-87 76-114 (385)
92 2q0l_A TRXR, thioredoxin reduc 83.9 1.3 4.6E-05 37.4 5.2 39 48-87 74-112 (311)
93 3ef6_A Toluene 1,2-dioxygenase 83.9 1.1 3.7E-05 40.3 4.8 99 48-197 200-308 (410)
94 1fl2_A Alkyl hydroperoxide red 83.8 1.1 3.8E-05 37.9 4.6 37 164-200 267-305 (310)
95 3uox_A Otemo; baeyer-villiger 83.6 0.94 3.2E-05 42.7 4.4 38 49-86 105-144 (545)
96 3fg2_P Putative rubredoxin red 83.5 1.8 6E-05 38.7 6.0 99 48-197 199-309 (404)
97 1mo9_A ORF3; nucleotide bindin 83.4 1.3 4.4E-05 41.3 5.2 102 48-197 270-377 (523)
98 2gag_B Heterotetrameric sarcos 83.2 1.2 4E-05 39.2 4.7 143 48-198 189-375 (405)
99 4gcm_A TRXR, thioredoxin reduc 83.1 1.6 5.6E-05 37.0 5.4 37 163-199 267-305 (312)
100 3axb_A Putative oxidoreductase 82.7 1.1 3.9E-05 40.3 4.4 41 48-89 196-254 (448)
101 3s5w_A L-ornithine 5-monooxyge 82.2 0.9 3.1E-05 41.2 3.6 39 48-86 142-189 (463)
102 3nlc_A Uncharacterized protein 82.2 1.4 4.9E-05 41.8 5.0 42 48-89 235-277 (549)
103 1fl2_A Alkyl hydroperoxide red 81.8 2 6.9E-05 36.2 5.5 41 47-87 70-113 (310)
104 1ges_A Glutathione reductase; 80.4 2 6.8E-05 39.1 5.2 103 48-197 223-327 (450)
105 2vdc_G Glutamate synthase [NAD 80.2 1.1 3.6E-05 41.4 3.3 38 164-201 407-445 (456)
106 1fec_A Trypanothione reductase 80.0 2.2 7.4E-05 39.4 5.4 102 48-197 246-350 (490)
107 3cgv_A Geranylgeranyl reductas 80.0 2 6.8E-05 37.5 5.0 41 48-88 117-161 (397)
108 3p1w_A Rabgdi protein; GDI RAB 79.9 1.5 5.1E-05 41.0 4.3 39 48-86 271-311 (475)
109 3cty_A Thioredoxin reductase; 79.9 2.8 9.7E-05 35.6 5.8 37 164-200 278-316 (319)
110 2hqm_A GR, grase, glutathione 78.8 2.5 8.6E-05 38.7 5.4 100 48-197 241-346 (479)
111 2ywl_A Thioredoxin reductase r 78.5 3.7 0.00013 31.8 5.6 15 114-128 54-68 (180)
112 1zk7_A HGII, reductase, mercur 78.5 2.8 9.7E-05 38.1 5.7 101 48-197 231-333 (467)
113 2wpf_A Trypanothione reductase 78.5 2.4 8.3E-05 39.2 5.2 102 48-197 250-354 (495)
114 4dna_A Probable glutathione re 77.6 2.6 8.8E-05 38.4 5.1 102 48-197 226-330 (463)
115 1ojt_A Surface protein; redox- 77.6 2.6 8.9E-05 38.6 5.1 102 48-197 241-348 (482)
116 2eq6_A Pyruvate dehydrogenase 77.2 2.9 9.8E-05 38.2 5.3 103 48-197 225-333 (464)
117 1vdc_A NTR, NADPH dependent th 76.6 1.8 6.3E-05 36.9 3.6 38 48-87 85-122 (333)
118 1q1r_A Putidaredoxin reductase 76.3 3.4 0.00012 37.3 5.5 99 48-197 206-318 (431)
119 2qae_A Lipoamide, dihydrolipoy 76.3 2.9 0.0001 38.0 5.0 102 48-197 231-339 (468)
120 3lad_A Dihydrolipoamide dehydr 76.0 3.3 0.00011 37.7 5.3 104 48-198 236-343 (476)
121 3nix_A Flavoprotein/dehydrogen 75.8 3.4 0.00012 36.5 5.3 41 48-88 121-165 (421)
122 2q0l_A TRXR, thioredoxin reduc 75.6 4.2 0.00014 34.2 5.6 37 164-200 271-309 (311)
123 1pj5_A N,N-dimethylglycine oxi 75.6 3.6 0.00012 40.5 5.8 41 48-89 166-207 (830)
124 1onf_A GR, grase, glutathione 75.3 3.2 0.00011 38.3 5.1 40 48-87 232-273 (500)
125 2bcg_G Secretory pathway GDP d 75.2 2.4 8.1E-05 38.6 4.1 40 48-88 257-299 (453)
126 3itj_A Thioredoxin reductase 1 74.9 2.7 9.2E-05 35.6 4.2 39 48-87 99-140 (338)
127 2qcu_A Aerobic glycerol-3-phos 74.1 3.8 0.00013 37.8 5.3 42 48-89 164-210 (501)
128 3ntd_A FAD-dependent pyridine 74.0 3.9 0.00013 38.0 5.4 40 48-87 207-265 (565)
129 4a9w_A Monooxygenase; baeyer-v 73.9 2.6 8.8E-05 35.9 3.8 40 162-201 310-353 (357)
130 2cdu_A NADPH oxidase; flavoenz 73.7 4.6 0.00016 36.5 5.7 39 48-87 206-245 (452)
131 1ebd_A E3BD, dihydrolipoamide 73.6 3.8 0.00013 37.1 5.1 102 48-197 226-332 (455)
132 1zmd_A Dihydrolipoyl dehydroge 73.4 4 0.00014 37.2 5.2 102 48-197 235-344 (474)
133 1hyu_A AHPF, alkyl hydroperoxi 73.3 3.3 0.00011 38.6 4.6 37 164-200 478-516 (521)
134 2qa1_A PGAE, polyketide oxygen 73.2 3.4 0.00012 38.3 4.7 47 48-94 121-171 (500)
135 2a87_A TRXR, TR, thioredoxin r 73.1 4.1 0.00014 34.9 5.0 37 164-200 278-316 (335)
136 4fk1_A Putative thioredoxin re 73.0 2.2 7.4E-05 36.3 3.1 38 163-200 261-300 (304)
137 3ic9_A Dihydrolipoamide dehydr 72.9 4.1 0.00014 37.5 5.2 104 48-197 229-337 (492)
138 3c4n_A Uncharacterized protein 72.9 1.2 4E-05 39.9 1.4 42 47-89 186-236 (405)
139 3alj_A 2-methyl-3-hydroxypyrid 72.5 3.3 0.00011 36.3 4.3 39 47-88 121-159 (379)
140 2a87_A TRXR, TR, thioredoxin r 72.3 3 0.0001 35.8 3.9 38 48-87 86-124 (335)
141 3l8k_A Dihydrolipoyl dehydroge 72.0 3.8 0.00013 37.3 4.7 101 48-198 226-333 (466)
142 2qa2_A CABE, polyketide oxygen 72.0 3.3 0.00011 38.4 4.3 47 48-94 122-172 (499)
143 1trb_A Thioredoxin reductase; 71.8 3.1 0.0001 35.2 3.8 38 48-87 77-114 (320)
144 3ntd_A FAD-dependent pyridine 71.8 4.2 0.00014 37.8 5.0 40 48-87 73-115 (565)
145 2a8x_A Dihydrolipoyl dehydroge 71.1 5 0.00017 36.4 5.3 102 48-197 227-333 (464)
146 1k0i_A P-hydroxybenzoate hydro 71.1 3.7 0.00013 36.0 4.3 43 47-89 117-163 (394)
147 4hb9_A Similarities with proba 70.7 4.4 0.00015 35.2 4.7 40 49-88 125-165 (412)
148 3fmw_A Oxygenase; mithramycin, 70.3 3.1 0.0001 39.4 3.7 47 48-94 163-213 (570)
149 1v59_A Dihydrolipoamide dehydr 70.0 4.4 0.00015 36.9 4.7 101 48-197 239-349 (478)
150 3c96_A Flavin-containing monoo 69.7 3 0.0001 37.1 3.4 41 48-89 124-169 (410)
151 3urh_A Dihydrolipoyl dehydroge 69.6 5.4 0.00019 36.5 5.2 102 48-197 254-362 (491)
152 1y0p_A Fumarate reductase flav 69.6 6.5 0.00022 36.9 5.8 41 48-88 270-316 (571)
153 1qo8_A Flavocytochrome C3 fuma 69.0 5.1 0.00018 37.6 5.0 42 48-89 265-312 (566)
154 3cty_A Thioredoxin reductase; 69.0 6.7 0.00023 33.1 5.3 38 48-87 87-124 (319)
155 1coy_A Cholesterol oxidase; ox 68.7 7 0.00024 36.2 5.8 49 47-95 241-299 (507)
156 2gqw_A Ferredoxin reductase; f 68.6 5.9 0.0002 35.4 5.1 96 48-198 202-308 (408)
157 3atr_A Conserved archaeal prot 68.6 6.9 0.00024 35.3 5.6 43 47-89 114-162 (453)
158 1v0j_A UDP-galactopyranose mut 68.4 0.51 1.7E-05 42.5 -2.1 36 48-93 217-253 (399)
159 2bc0_A NADH oxidase; flavoprot 68.1 4.3 0.00015 37.3 4.2 39 48-86 107-146 (490)
160 2bi7_A UDP-galactopyranose mut 68.0 1.2 4E-05 39.9 0.3 18 77-94 226-243 (384)
161 1n4w_A CHOD, cholesterol oxida 67.8 7.2 0.00025 36.0 5.7 49 47-95 236-294 (504)
162 3e1t_A Halogenase; flavoprotei 67.7 6.4 0.00022 36.3 5.3 41 48-88 126-171 (512)
163 1i8t_A UDP-galactopyranose mut 67.6 0.57 2E-05 41.7 -1.9 35 48-93 205-239 (367)
164 3cgb_A Pyridine nucleotide-dis 67.5 5.8 0.0002 36.3 4.9 40 47-86 107-149 (480)
165 3d1c_A Flavin-containing putat 67.3 6.2 0.00021 33.9 4.8 40 48-87 230-270 (369)
166 2rgh_A Alpha-glycerophosphate 67.0 6.8 0.00023 36.9 5.4 42 48-89 203-250 (571)
167 1d4d_A Flavocytochrome C fumar 67.0 7.7 0.00026 36.5 5.7 41 48-88 270-316 (572)
168 3ef6_A Toluene 1,2-dioxygenase 66.9 5.1 0.00018 35.8 4.3 39 47-87 71-109 (410)
169 1q1r_A Putidaredoxin reductase 66.8 5.7 0.00019 35.8 4.6 38 47-86 74-111 (431)
170 3oc4_A Oxidoreductase, pyridin 66.7 5.4 0.00019 36.1 4.5 41 47-87 72-113 (452)
171 3h8l_A NADH oxidase; membrane 66.6 3.7 0.00013 36.4 3.3 37 165-201 298-337 (409)
172 2e4g_A Tryptophan halogenase; 66.4 6.9 0.00024 36.5 5.3 42 47-89 209-252 (550)
173 1m6i_A Programmed cell death p 65.9 4.4 0.00015 37.3 3.8 39 46-86 103-141 (493)
174 3iwa_A FAD-dependent pyridine 65.9 6.7 0.00023 35.6 5.0 40 47-86 80-122 (472)
175 2gqw_A Ferredoxin reductase; f 65.7 4.6 0.00016 36.1 3.7 40 46-87 72-111 (408)
176 2q7v_A Thioredoxin reductase; 65.2 4.9 0.00017 34.1 3.7 39 48-87 80-121 (325)
177 4b1b_A TRXR, thioredoxin reduc 64.8 8.6 0.00029 36.2 5.6 104 48-197 278-383 (542)
178 1hyu_A AHPF, alkyl hydroperoxi 64.7 8.6 0.00029 35.7 5.5 41 47-87 281-324 (521)
179 2weu_A Tryptophan 5-halogenase 64.6 8.1 0.00028 35.4 5.3 42 47-89 187-230 (511)
180 1xhc_A NADH oxidase /nitrite r 64.4 4.6 0.00016 35.6 3.5 38 47-87 74-111 (367)
181 1dxl_A Dihydrolipoamide dehydr 64.2 5.4 0.00019 36.1 4.0 103 48-197 233-341 (470)
182 2bry_A NEDD9 interacting prote 62.7 6.1 0.00021 36.5 4.1 43 47-89 180-230 (497)
183 4at0_A 3-ketosteroid-delta4-5a 62.6 8.9 0.00031 35.3 5.2 42 48-89 217-264 (510)
184 3nlc_A Uncharacterized protein 62.1 26 0.00088 33.0 8.4 36 165-200 507-543 (549)
185 3da1_A Glycerol-3-phosphate de 61.3 6.9 0.00024 36.8 4.2 42 48-89 185-232 (561)
186 3cgb_A Pyridine nucleotide-dis 61.3 11 0.00037 34.4 5.5 39 48-87 242-280 (480)
187 4b63_A L-ornithine N5 monooxyg 60.8 7.1 0.00024 36.1 4.2 39 48-86 160-211 (501)
188 3ics_A Coenzyme A-disulfide re 60.6 9 0.00031 35.9 4.9 40 48-87 108-150 (588)
189 2gqf_A Hypothetical protein HI 60.5 5.3 0.00018 35.9 3.1 33 164-196 361-399 (401)
190 3ics_A Coenzyme A-disulfide re 60.2 8.1 0.00028 36.2 4.5 38 48-87 243-280 (588)
191 1nhp_A NADH peroxidase; oxidor 59.7 9 0.00031 34.5 4.6 39 48-87 206-244 (447)
192 3dk9_A Grase, GR, glutathione 59.7 12 0.00041 34.0 5.4 103 48-198 243-356 (478)
193 1lvl_A Dihydrolipoamide dehydr 59.4 8.2 0.00028 35.0 4.3 100 48-197 227-329 (458)
194 2r0c_A REBC; flavin adenine di 59.0 7.5 0.00026 36.3 4.0 45 50-94 152-202 (549)
195 2i0z_A NAD(FAD)-utilizing dehy 58.7 6.3 0.00022 35.6 3.4 35 165-199 403-443 (447)
196 3kd9_A Coenzyme A disulfide re 57.9 13 0.00044 33.4 5.3 38 47-86 73-111 (449)
197 2aqj_A Tryptophan halogenase, 57.5 13 0.00045 34.4 5.4 42 47-89 179-222 (538)
198 3dgh_A TRXR-1, thioredoxin red 57.0 9.2 0.00031 34.8 4.2 103 48-198 242-352 (483)
199 3sx6_A Sulfide-quinone reducta 57.0 16 0.00054 32.8 5.7 37 165-201 296-345 (437)
200 3i3l_A Alkylhalidase CMLS; fla 56.6 11 0.00036 35.9 4.7 42 48-89 143-188 (591)
201 3lxd_A FAD-dependent pyridine 56.2 8.9 0.00031 34.1 3.9 38 47-86 79-116 (415)
202 4eqs_A Coenzyme A disulfide re 55.1 12 0.0004 33.9 4.5 40 48-87 72-114 (437)
203 3h8l_A NADH oxidase; membrane 54.8 16 0.00055 32.2 5.3 39 47-86 70-110 (409)
204 1nhp_A NADH peroxidase; oxidor 54.8 13 0.00045 33.3 4.8 40 47-86 70-112 (447)
205 3hyw_A Sulfide-quinone reducta 54.5 12 0.00042 33.5 4.5 38 47-87 70-107 (430)
206 2cdu_A NADPH oxidase; flavoenz 54.4 13 0.00045 33.4 4.7 40 47-86 72-114 (452)
207 1rp0_A ARA6, thiazole biosynth 54.4 16 0.00055 30.7 5.1 37 166-202 233-277 (284)
208 3h28_A Sulfide-quinone reducta 53.9 21 0.00071 31.8 5.9 37 165-201 285-334 (430)
209 3dk9_A Grase, GR, glutathione 53.7 13 0.00045 33.7 4.7 21 65-86 137-157 (478)
210 1gte_A Dihydropyrimidine dehyd 53.4 13 0.00045 37.7 4.9 37 164-200 471-508 (1025)
211 3urh_A Dihydrolipoyl dehydroge 52.9 12 0.00042 34.0 4.3 24 63-86 142-167 (491)
212 2jbv_A Choline oxidase; alcoho 52.7 20 0.00068 33.5 5.8 52 46-97 222-281 (546)
213 3lad_A Dihydrolipoamide dehydr 52.7 15 0.00052 33.2 4.9 37 48-87 114-152 (476)
214 3t37_A Probable dehydrogenase; 52.6 25 0.00084 32.1 6.3 51 47-97 225-279 (526)
215 3r9u_A Thioredoxin reductase; 52.6 9.8 0.00034 31.6 3.3 37 48-87 77-116 (315)
216 4fk1_A Putative thioredoxin re 52.5 15 0.00051 30.9 4.5 35 53-87 80-115 (304)
217 3l8k_A Dihydrolipoyl dehydroge 52.3 15 0.00052 33.2 4.8 37 47-86 103-141 (466)
218 3dgh_A TRXR-1, thioredoxin red 51.9 17 0.00058 33.0 5.1 24 63-86 135-159 (483)
219 3ic9_A Dihydrolipoamide dehydr 51.2 16 0.00056 33.4 4.9 21 66-86 125-145 (492)
220 1v59_A Dihydrolipoamide dehydr 51.1 17 0.00059 32.8 5.0 38 47-87 110-155 (478)
221 2zxi_A TRNA uridine 5-carboxym 50.7 16 0.00055 35.3 4.9 41 47-88 138-179 (637)
222 2hqm_A GR, grase, glutathione 50.7 17 0.00057 33.1 4.8 36 48-86 120-157 (479)
223 1dxl_A Dihydrolipoamide dehydr 50.6 16 0.00054 32.9 4.7 37 48-87 111-149 (470)
224 1rp0_A ARA6, thiazole biosynth 50.0 9.6 0.00033 32.1 2.9 41 47-87 134-189 (284)
225 4dna_A Probable glutathione re 49.8 16 0.00056 32.9 4.6 20 67-86 122-142 (463)
226 2a8x_A Dihydrolipoyl dehydroge 49.7 16 0.00056 32.9 4.6 37 47-86 105-143 (464)
227 3dgz_A Thioredoxin reductase 2 49.7 18 0.0006 33.0 4.8 36 163-198 315-352 (488)
228 2pyx_A Tryptophan halogenase; 49.0 18 0.00063 33.3 4.9 42 47-89 190-233 (526)
229 2gag_A Heterotetrameric sarcos 48.8 18 0.00062 36.4 5.1 38 164-201 408-445 (965)
230 3v76_A Flavoprotein; structura 48.7 6.6 0.00023 35.5 1.7 31 164-194 380-416 (417)
231 3fg2_P Putative rubredoxin red 48.7 18 0.0006 32.0 4.6 38 47-87 71-108 (404)
232 2bc0_A NADH oxidase; flavoprot 48.7 17 0.00057 33.2 4.5 38 48-87 251-289 (490)
233 1ges_A Glutathione reductase; 48.6 18 0.00061 32.6 4.6 33 48-86 108-140 (450)
234 3o0h_A Glutathione reductase; 48.2 18 0.00062 32.9 4.7 15 72-86 149-163 (484)
235 3pl8_A Pyranose 2-oxidase; sub 47.4 28 0.00095 33.2 6.0 49 47-95 274-330 (623)
236 3klj_A NAD(FAD)-dependent dehy 46.8 14 0.00047 32.8 3.5 36 162-197 253-293 (385)
237 1cjc_A Protein (adrenodoxin re 46.8 9.7 0.00033 34.8 2.6 36 166-201 359-396 (460)
238 1fec_A Trypanothione reductase 46.5 20 0.00069 32.7 4.7 37 47-86 118-160 (490)
239 2r9z_A Glutathione amide reduc 46.0 21 0.00071 32.3 4.7 34 48-87 107-140 (463)
240 3ces_A MNMG, tRNA uridine 5-ca 46.0 18 0.0006 35.1 4.3 41 47-88 139-180 (651)
241 2wpf_A Trypanothione reductase 45.9 21 0.00071 32.7 4.7 37 47-86 122-164 (495)
242 1kf6_A Fumarate reductase flav 45.6 28 0.00095 33.0 5.6 43 48-90 150-198 (602)
243 2x8g_A Thioredoxin glutathione 45.5 22 0.00076 33.3 4.9 35 164-198 423-459 (598)
244 2qae_A Lipoamide, dihydrolipoy 45.5 19 0.00063 32.6 4.2 37 48-87 108-146 (468)
245 3kd9_A Coenzyme A disulfide re 45.5 15 0.0005 33.1 3.5 98 48-197 204-314 (449)
246 3cp8_A TRNA uridine 5-carboxym 45.5 20 0.00069 34.6 4.6 34 165-198 377-410 (641)
247 1ebd_A E3BD, dihydrolipoamide 45.4 22 0.00074 32.0 4.7 37 47-86 105-142 (455)
248 3qfa_A Thioredoxin reductase 1 45.2 21 0.00074 32.9 4.7 34 164-197 344-379 (519)
249 1zmd_A Dihydrolipoyl dehydroge 44.5 20 0.00069 32.4 4.3 37 48-87 112-150 (474)
250 1o94_A Tmadh, trimethylamine d 43.3 16 0.00054 35.5 3.6 36 165-200 665-700 (729)
251 2eq6_A Pyruvate dehydrogenase 43.1 22 0.00075 32.2 4.3 34 47-86 107-140 (464)
252 1ojt_A Surface protein; redox- 43.0 22 0.00075 32.3 4.3 37 48-87 110-158 (482)
253 2yqu_A 2-oxoglutarate dehydrog 42.7 28 0.00097 31.2 5.0 35 48-86 104-138 (455)
254 4g6h_A Rotenone-insensitive NA 42.5 22 0.00074 32.9 4.3 34 165-198 363-399 (502)
255 1lqt_A FPRA; NADP+ derivative, 41.2 11 0.00037 34.5 1.9 36 165-200 350-387 (456)
256 3sx6_A Sulfide-quinone reducta 41.2 25 0.00087 31.3 4.4 38 47-87 73-110 (437)
257 3dgz_A Thioredoxin reductase 2 40.8 26 0.00089 31.8 4.5 39 48-86 240-284 (488)
258 1lvl_A Dihydrolipoamide dehydr 40.2 24 0.00083 31.8 4.1 34 47-86 110-143 (458)
259 3cp8_A TRNA uridine 5-carboxym 40.1 28 0.00096 33.6 4.7 41 47-88 132-173 (641)
260 1xdi_A RV3303C-LPDA; reductase 40.1 24 0.00082 32.2 4.1 39 47-86 109-153 (499)
261 1kdg_A CDH, cellobiose dehydro 39.9 44 0.0015 30.8 6.0 50 47-96 210-268 (546)
262 3h28_A Sulfide-quinone reducta 39.6 15 0.00052 32.7 2.7 37 48-86 215-253 (430)
263 1vg0_A RAB proteins geranylger 39.5 39 0.0013 32.7 5.6 33 164-196 564-596 (650)
264 1zk7_A HGII, reductase, mercur 39.4 29 0.001 31.2 4.5 38 47-87 109-148 (467)
265 3uox_A Otemo; baeyer-villiger 38.9 23 0.00077 33.1 3.8 36 47-87 352-389 (545)
266 2bs2_A Quinol-fumarate reducta 38.8 44 0.0015 32.1 5.9 42 48-89 173-220 (660)
267 3gwf_A Cyclohexanone monooxyge 38.5 21 0.00072 33.3 3.5 37 47-87 344-382 (540)
268 1y0p_A Fumarate reductase flav 38.1 15 0.00051 34.3 2.4 34 165-198 525-567 (571)
269 3jsk_A Cypbp37 protein; octame 37.7 16 0.00054 32.5 2.4 36 166-201 293-336 (344)
270 1chu_A Protein (L-aspartate ox 37.6 44 0.0015 31.1 5.6 36 164-199 365-410 (540)
271 2e5v_A L-aspartate oxidase; ar 37.4 26 0.00088 32.0 3.9 40 48-89 134-176 (472)
272 1y56_A Hypothetical protein PH 37.3 21 0.0007 32.8 3.2 41 47-87 174-217 (493)
273 1ps9_A 2,4-dienoyl-COA reducta 37.1 42 0.0014 32.0 5.5 38 48-87 588-626 (671)
274 1mo9_A ORF3; nucleotide bindin 37.0 28 0.00096 32.1 4.1 34 48-86 150-183 (523)
275 1chu_A Protein (L-aspartate ox 36.9 38 0.0013 31.5 5.0 43 47-89 153-208 (540)
276 1ju2_A HydroxynitrIle lyase; f 36.6 47 0.0016 30.8 5.6 51 47-97 208-269 (536)
277 1qo8_A Flavocytochrome C3 fuma 36.4 20 0.00067 33.5 2.9 35 165-199 520-563 (566)
278 2gmh_A Electron transfer flavo 35.8 41 0.0014 31.6 5.1 36 166-201 346-387 (584)
279 2h88_A Succinate dehydrogenase 35.6 43 0.0015 32.0 5.2 42 48-89 170-217 (621)
280 2e1m_B L-glutamate oxidase; L- 35.2 18 0.00062 27.5 2.0 18 75-92 5-22 (130)
281 2gmh_A Electron transfer flavo 34.8 48 0.0017 31.1 5.4 43 47-89 158-217 (584)
282 3hyw_A Sulfide-quinone reducta 34.5 13 0.00046 33.3 1.4 37 164-200 284-333 (430)
283 4at0_A 3-ketosteroid-delta4-5a 33.8 17 0.00057 33.5 2.0 33 165-197 467-508 (510)
284 1d4d_A Flavocytochrome C fumar 33.4 19 0.00066 33.7 2.4 35 165-199 526-569 (572)
285 3ces_A MNMG, tRNA uridine 5-ca 32.7 68 0.0023 31.0 6.1 35 164-198 382-416 (651)
286 2imh_A Hypothetical protein UN 32.6 40 0.0014 28.3 3.9 45 166-210 112-165 (231)
287 1xhc_A NADH oxidase /nitrite r 32.5 31 0.0011 30.1 3.5 94 48-197 198-296 (367)
288 2wdq_A Succinate dehydrogenase 32.4 48 0.0017 31.2 5.0 42 48-89 158-206 (588)
289 3q9t_A Choline dehydrogenase a 32.2 71 0.0024 30.1 6.1 50 47-96 220-277 (577)
290 3qvp_A Glucose oxidase; oxidor 32.2 55 0.0019 31.0 5.3 49 47-95 241-299 (583)
291 4eqs_A Coenzyme A disulfide re 32.1 29 0.001 31.2 3.3 35 48-86 203-237 (437)
292 2gjc_A Thiazole biosynthetic e 32.0 45 0.0015 29.2 4.4 36 165-200 282-325 (326)
293 2dkh_A 3-hydroxybenzoate hydro 31.8 36 0.0012 32.3 4.0 47 48-94 158-217 (639)
294 3fim_B ARYL-alcohol oxidase; A 31.5 62 0.0021 30.4 5.5 52 46-97 221-284 (566)
295 2v3a_A Rubredoxin reductase; a 31.3 37 0.0013 29.6 3.8 38 47-87 74-111 (384)
296 1gpe_A Protein (glucose oxidas 31.3 44 0.0015 31.5 4.5 49 47-95 245-303 (587)
297 1d5t_A Guanine nucleotide diss 31.1 37 0.0013 30.4 3.8 31 166-196 397-427 (433)
298 4a5l_A Thioredoxin reductase; 30.8 41 0.0014 27.8 3.8 34 54-87 86-119 (314)
299 4ap3_A Steroid monooxygenase; 30.7 38 0.0013 31.6 3.9 36 47-87 357-394 (549)
300 3atr_A Conserved archaeal prot 30.6 51 0.0017 29.4 4.6 35 166-200 281-321 (453)
301 2l9s_A PHD finger protein 12; 28.0 30 0.001 21.5 1.7 24 209-232 20-45 (45)
302 3vrd_B FCCB subunit, flavocyto 27.7 50 0.0017 28.7 4.0 39 46-87 68-106 (401)
303 1onf_A GR, grase, glutathione 27.4 61 0.0021 29.5 4.6 34 164-197 302-370 (500)
304 2h88_A Succinate dehydrogenase 27.4 50 0.0017 31.5 4.1 36 165-200 388-433 (621)
305 3hdq_A UDP-galactopyranose mut 25.4 28 0.00096 31.3 1.9 33 165-197 355-389 (397)
306 2e1m_A L-glutamate oxidase; L- 25.2 34 0.0012 30.5 2.4 37 49-85 333-369 (376)
307 2bs2_A Quinol-fumarate reducta 24.7 95 0.0033 29.7 5.6 36 165-200 384-429 (660)
308 2x3n_A Probable FAD-dependent 24.2 64 0.0022 27.9 4.0 35 167-201 286-326 (399)
309 4b1b_A TRXR, thioredoxin reduc 24.0 86 0.0029 29.3 5.0 15 73-87 181-195 (542)
310 2zxi_A TRNA uridine 5-carboxym 23.2 92 0.0032 30.0 5.1 33 164-196 387-419 (637)
311 1jnr_A Adenylylsulfate reducta 23.0 1E+02 0.0034 29.3 5.4 42 47-88 166-217 (643)
312 3nix_A Flavoprotein/dehydrogen 22.9 77 0.0026 27.4 4.3 35 167-201 288-328 (421)
313 2xve_A Flavin-containing monoo 22.6 86 0.0029 28.2 4.6 35 164-198 305-339 (464)
314 3qfa_A Thioredoxin reductase 1 22.5 1.1E+02 0.0038 27.9 5.4 39 48-86 265-312 (519)
315 4g6h_A Rotenone-insensitive NA 22.1 76 0.0026 29.1 4.2 39 48-87 111-167 (502)
316 4hb9_A Similarities with proba 21.8 59 0.002 27.8 3.2 37 166-202 310-352 (412)
317 2wdq_A Succinate dehydrogenase 21.5 38 0.0013 31.9 2.0 35 165-199 379-423 (588)
318 1kf6_A Fumarate reductase flav 21.4 45 0.0015 31.5 2.5 36 164-199 370-415 (602)
319 3cgv_A Geranylgeranyl reductas 20.6 1E+02 0.0034 26.3 4.4 37 166-202 276-318 (397)
320 2gv8_A Monooxygenase; FMO, FAD 20.0 80 0.0027 28.1 3.8 34 164-197 326-359 (447)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.96 E-value=8.4e-28 Score=215.76 Aligned_cols=193 Identities=16% Similarity=0.190 Sum_probs=150.7
Q ss_pred cccccC-CCCceeccCCceeeeCCh---hHHh----HHHcCceeccccC--------------CCCcc------------
Q 043717 2 GTRMIG-PQPLIFDHAAQFFTVTDS---RFMS----WLMVGWREVWCDH--------------GKTSM------------ 47 (246)
Q Consensus 2 atrR~~-~~~~~~DhGAqyft~~~~---~f~~----~~~~g~~~~W~~~--------------g~p~m------------ 47 (246)
++++.. ...+.+|||++||+.+++ .|.. |.+.|++.+|... ..++|
T Consensus 44 ~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g 123 (342)
T 3qj4_A 44 TTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESG 123 (342)
T ss_dssp CEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHHTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHT
T ss_pred eeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHHhCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcC
Confidence 455543 223479999999999987 4543 7788999999632 11222
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCC--hH-HHHHHhh-----------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSG--LP-QIARQMK----------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~--~~-~la~~L~----------------- 107 (246)
++|+++++|++|++.+++|+|.+++|..+.||.||+|+|++++.+||.... ++ .....+.
T Consensus 124 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~ 203 (342)
T 3qj4_A 124 AEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEAG 203 (342)
T ss_dssp CEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSSC
T ss_pred CEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECCC
Confidence 689999999999999999999887775678999999999999999997421 00 1111111
Q ss_pred ------------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCC
Q 043717 108 ------------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQK 139 (246)
Q Consensus 108 ------------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~ 139 (246)
+++.+.+++++.+.++++|+++||.. .+
T Consensus 204 ~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~----~~ 279 (342)
T 3qj4_A 204 TKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGL----PQ 279 (342)
T ss_dssp C--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSCSC----CC
T ss_pred CccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhccCC----CC
Confidence 12346789999999999999999853 37
Q ss_pred CceeeeeecCccCCCCCCC--CCCcc-CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 043717 140 PIYTRVHLWGAALPTNTPS--IPCIF-DPHGRAGICGNWLLGSSVESAALSGMALANHIADY 198 (246)
Q Consensus 140 p~~~~v~RW~~A~P~~~~g--~~~~~-~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~ 198 (246)
|.++++|||++|+|+|.+. ..++. +..|+|++||||+.|++||+||+||+++|++|++.
T Consensus 280 p~~~~v~rW~~a~p~~~~~~~~~~~~~~~~~~l~laGd~~~g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 280 PIATKCQKWRHSQVTNAAANCPGQMTLHHKPFLACGGDGFTQSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp CSEEEEEEETTCSBSSCCSSSCSCEEEETTTEEEECSGGGSCSSHHHHHHHHHHHHHHHTTC
T ss_pred CceeeeccccccccccccCCCcceeEecCCccEEEEccccCCCCccHHHHHHHHHHHHHHhh
Confidence 9999999999999999772 23444 67799999999999999999999999999998764
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.87 E-value=4e-21 Score=170.42 Aligned_cols=186 Identities=25% Similarity=0.419 Sum_probs=150.9
Q ss_pred eeccCCceeeeCChhHHh----HHHcCceeccccC--------------------CCCc----------ceeeecCceee
Q 043717 12 IFDHAAQFFTVTDSRFMS----WLMVGWREVWCDH--------------------GKTS----------MVSIVRPCWIS 57 (246)
Q Consensus 12 ~~DhGAqyft~~~~~f~~----~~~~g~~~~W~~~--------------------g~p~----------m~~I~l~t~V~ 57 (246)
.+|+|+++|+..+++|.. |...+.+..|... +.++ .++|+++++|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~ 129 (336)
T 1yvv_A 50 ALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRIT 129 (336)
T ss_dssp EEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEE
T ss_pred eEecCCCeEecCCHHHHHHHHHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHHccCcEEecCEEE
Confidence 699999999999998876 6667888888632 0112 26899999999
Q ss_pred EEEEeCCeEEEEeCCceee-ccCEEEEcCCHHHHHHhhccCChHHHHHHhh-----------------------------
Q 043717 58 NLEPFNGMWHLRENVKPRG-QFDVVVIAHNGKCANWLLGSSGLPQIARQMK----------------------------- 107 (246)
Q Consensus 58 ~I~~~~~~w~l~~~~g~~~-~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~----------------------------- 107 (246)
+|+..+++|.|++++|... .+|.||+|+|++++.++++.. +.+...+.
T Consensus 130 ~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (336)
T 1yvv_A 130 EVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAA--PKLASVVAGVKMDPTWAVALAFETPLQTPMQGCFVQD 207 (336)
T ss_dssp EEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGGTTC--HHHHHHHTTCCEEEEEEEEEEESSCCSCCCCEEEECS
T ss_pred EEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhhccC--HHHHHHHhhcCccceeEEEEEecCCCCCCCCeEEeCC
Confidence 9999999999988777444 489999999999999988642 22221111
Q ss_pred -------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCC
Q 043717 108 -------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNT 156 (246)
Q Consensus 108 -------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~ 156 (246)
+.+.+.+++++.+.++++|.++||.. ...|.+..++||++++|++.
T Consensus 208 ~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~---~~~p~~~~~~rw~~a~~~~~ 284 (336)
T 1yvv_A 208 SPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCT---MPAPVFSLAHRWLYARPAGA 284 (336)
T ss_dssp SSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSC---CCCCSEEEEEEEEEEEESSC
T ss_pred CceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCC---CCCCcEEEccccCccCCCCC
Confidence 12335688999999999999999964 24688899999999999999
Q ss_pred CCCCCccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 157 PSIPCIFDPHGRAGICGNWLLGSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 157 ~g~~~~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
.++..++...++|++||||+.|++||+|++||.++|+.|.+.+.++
T Consensus 285 ~~~~~~~~~~~rl~laGDa~~g~gv~~a~~sg~~lA~~l~~~~~~~ 330 (336)
T 1yvv_A 285 HEWGALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp CCCSCEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CCCCeeecCCCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 9888777778999999999999999999999999999999887554
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.79 E-value=5.6e-19 Score=164.34 Aligned_cols=145 Identities=19% Similarity=0.146 Sum_probs=118.0
Q ss_pred eeeecCceeeEEEEeCCe-EEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhh-------------------
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMK------------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~------------------- 107 (246)
++|+++++|++|...+++ |.|.++++ .+.||+||+|+|++++.+||+.. .+.+...+.
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~~v~~~~~-~~~ad~vv~a~p~~~~~~ll~~~-~~~~~~~l~~~~~~~~~~v~l~~~~~~~ 326 (477)
T 3nks_A 249 VSVLRGQPVCGLSLQAEGRWKVSLRDS-SLEADHVISAIPASVLSELLPAE-AAPLARALSAITAVSVAVVNLQYQGAHL 326 (477)
T ss_dssp CEEECSCCCCEEEECGGGCEEEECSSC-EEEESEEEECSCHHHHHHHSCGG-GHHHHHHHHTCCEEEEEEEEEEETTCCC
T ss_pred CEEEeCCEEEEEEEcCCceEEEEECCe-EEEcCEEEECCCHHHHHHhcccc-CHHHHHHHhcCCCCcEEEEEEEECCCCC
Confidence 589999999999988777 99977655 67999999999999999998764 233332221
Q ss_pred ---------------------------h--h-----------------------CCCCCHHHHHHHHHHHHHHHhCCCCC
Q 043717 108 ---------------------------E--N-----------------------IPTATAEKVKKGMLEGVEAALGRPKG 135 (246)
Q Consensus 108 ---------------------------~--~-----------------------~~~~~~eel~~~ll~eL~~llg~~~~ 135 (246)
. . ..+.+++++++.++++|+++||+..
T Consensus 327 ~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~- 405 (477)
T 3nks_A 327 PVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKE- 405 (477)
T ss_dssp SSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCS-
T ss_pred CCCCceEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCC-
Confidence 0 0 0124789999999999999999743
Q ss_pred CCCCCceeeeeecCccCCCCCCCCCC--------ccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 043717 136 SLQKPIYTRVHLWGAALPTNTPSIPC--------IFDPHGRAGICGNWLLGSSVESAALSGMALANHIADY 198 (246)
Q Consensus 136 ~~~~p~~~~v~RW~~A~P~~~~g~~~--------~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~ 198 (246)
+|.++.++||++++|+|.+++.. +....++|++||||+.|.+|++|+.||+++|++|+..
T Consensus 406 ---~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~~~G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 406 ---MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp ---CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTTTSCCSHHHHHHHHHHHHHHHHHC
T ss_pred ---CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 78899999999999999999752 1233578999999999999999999999999999863
No 4
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.78 E-value=7.2e-19 Score=163.90 Aligned_cols=150 Identities=15% Similarity=0.125 Sum_probs=120.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhh--------------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMK-------------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~-------------------- 107 (246)
.+|+++++|++|++.+++|.|.+++| .+.||+||+|+|++++.+|+..... .....+.
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~~-~~~~~~~~~~~~~v~l~~~~~~~~~~~ 326 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAHL-PELEQLTTHSTATVTMIFDQQQSLPIE 326 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHCTTSCC-HHHHTCCEEEEEEEEEEEECCSSCSSS
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHcCccCH-HHHhcCCCCeEEEEEEEECCcCCCCCC
Confidence 48999999999999999999988777 7899999999999999999865321 1111000
Q ss_pred -------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceee
Q 043717 108 -------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTR 144 (246)
Q Consensus 108 -------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~ 144 (246)
..+.+.+++++.+.++++|++++|... .|.+..
T Consensus 327 g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~----~p~~~~ 402 (475)
T 3lov_A 327 GTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTL----EPKQVI 402 (475)
T ss_dssp SSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCC----CCSEEE
T ss_pred CEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCC----CCeEEE
Confidence 001135789999999999999999742 788999
Q ss_pred eeecCccCCCCCCCCC--------CccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 043717 145 VHLWGAALPTNTPSIP--------CIFDPHGRAGICGNWLLGSSVESAALSGMALANHIADYLGSGG 203 (246)
Q Consensus 145 v~RW~~A~P~~~~g~~--------~~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l~~~~ 203 (246)
++||++++|+|.+|+. .+.+..++|++||||+.|.++++|++||+++|++|+..+....
T Consensus 403 v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~g~~~a~~sG~~aA~~i~~~l~~~~ 469 (475)
T 3lov_A 403 ISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDGVGLPDCVASAKTMIESIELEQSHTD 469 (475)
T ss_dssp EEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSCSSHHHHHHHHHHHHHHHHHTC----
T ss_pred EEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999973 2224568999999999999999999999999999999876653
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.77 E-value=1.1e-18 Score=161.21 Aligned_cols=148 Identities=16% Similarity=0.177 Sum_probs=120.4
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhh--------------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMK-------------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~-------------------- 107 (246)
++|+++++|++|+..+++|.|.+++|..+.||+||+|+|++++.+|+...........+.
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~ 327 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGMLSELPAISHLKNMHSTSVANVALGFPEGSVQMEH 327 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHHTTTSTTHHHHHTCEEEEEEEEEEEESSTTCCCSS
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHHcCCchhhHHHhcCCCCceEEEEEEECchhcCCCC
Confidence 489999999999999889999887776789999999999999999986532111111100
Q ss_pred ---------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCce
Q 043717 108 ---------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIY 142 (246)
Q Consensus 108 ---------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~ 142 (246)
+.+...+++++.+.++++|++++|.. ..|..
T Consensus 328 ~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~----~~p~~ 403 (470)
T 3i6d_A 328 EGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNIN----GEPEM 403 (470)
T ss_dssp CSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCC----SCCSE
T ss_pred CCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCC----CCceE
Confidence 00114578999999999999999864 37888
Q ss_pred eeeeecCccCCCCCCCCCC--------ccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 043717 143 TRVHLWGAALPTNTPSIPC--------IFDPHGRAGICGNWLLGSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 143 ~~v~RW~~A~P~~~~g~~~--------~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l 199 (246)
..++||++++|+|.+|+.. +....++|++||||+.|.++++|+.||+++|++|++.+
T Consensus 404 ~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 404 TCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFEGVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp EEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999742 22456899999999999999999999999999999876
No 6
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.64 E-value=3.2e-15 Score=136.74 Aligned_cols=143 Identities=15% Similarity=0.078 Sum_probs=108.4
Q ss_pred eeeecCceeeEEEEeCCeEE-EEeCCceeeccCEEEEcCCHHHHHHhhccCC-h---HHHHHHhh---------------
Q 043717 48 VSIVRPCWISNLEPFNGMWH-LRENVKPRGQFDVVVIAHNGKCANWLLGSSG-L---PQIARQMK--------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~-l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~-~---~~la~~L~--------------- 107 (246)
++|+++++|++|...+++|. |.++ +..+.+|.||+|+|++.+.+||+... . +.....+.
T Consensus 211 ~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 289 (425)
T 3ka7_A 211 GKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAAD 289 (425)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEES
T ss_pred CEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecC
Confidence 58999999999999988887 7666 44789999999999999999997431 1 12222111
Q ss_pred ----------------------------hh-CC--------------C--CCHHHHHHHHHHHHHHHhCCCCCCCCCCce
Q 043717 108 ----------------------------EN-IP--------------T--ATAEKVKKGMLEGVEAALGRPKGSLQKPIY 142 (246)
Q Consensus 108 ----------------------------~~-~~--------------~--~~~eel~~~ll~eL~~llg~~~~~~~~p~~ 142 (246)
+. .+ + ...+++++.++++|+++++.. .++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~-----~~~~ 364 (425)
T 3ka7_A 290 EPLVGHTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKEIFPGK-----RYEV 364 (425)
T ss_dssp SCSSCSSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHSTTC-----CEEE
T ss_pred CCccCcCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHHhCCCC-----ceEE
Confidence 00 00 0 123466799999999999641 5677
Q ss_pred eeeeecCccCCCCCCCCCCcc---CCCCCEEEEcCCCCC---CCHHHHHHHHHHHHHHHH
Q 043717 143 TRVHLWGAALPTNTPSIPCIF---DPHGRAGICGNWLLG---SSVESAALSGMALANHIA 196 (246)
Q Consensus 143 ~~v~RW~~A~P~~~~g~~~~~---~~~~gL~laGDw~~G---~~ie~Av~SG~~aA~~l~ 196 (246)
..+++|+.++|+|.+++.... .+.+||++||||+.+ .+||+|+.||+++|++|+
T Consensus 365 ~~v~~~~~~~P~~~~~~~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 365 LLIQSYHDEWPVNRAASGTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp EEEEEEBTTBCSBSSCTTCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred EEEEEECCCccccccccCCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 899999999999999976443 334699999999987 699999999999999886
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.61 E-value=4.1e-15 Score=138.40 Aligned_cols=150 Identities=17% Similarity=0.171 Sum_probs=112.3
Q ss_pred eeeecCceeeEEEEeCCeEEEEe---CCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhh-----------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE---NVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMK----------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~---~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~----------------- 107 (246)
.+|+++++|++|...+++|.|.+ .++..+.||+||+|+|+.++.+|++... +.....+.
T Consensus 250 ~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l~-~~~~~~l~~~~~~~~~~v~l~~~~~ 328 (478)
T 2ivd_A 250 DAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPLD-DALAALVAGIAYAPIAVVHLGFDAG 328 (478)
T ss_dssp GGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHHHTTTC-HHHHHHHHTCCBCCEEEEEEEECTT
T ss_pred hhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHHhhccC-HHHHHHHhcCCCCcEEEEEEEEccc
Confidence 38999999999998888899987 5666789999999999999999986532 11111110
Q ss_pred --------------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCC
Q 043717 108 --------------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSL 137 (246)
Q Consensus 108 --------------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~ 137 (246)
....+.+++++.+.++++|+++++..
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 404 (478)
T 2ivd_A 329 TLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVT---- 404 (478)
T ss_dssp SSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCC----
T ss_pred cCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCC----
Confidence 00013578999999999999999863
Q ss_pred CCCceeeeeecCccCCCCCCCCCCc-------cCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 138 QKPIYTRVHLWGAALPTNTPSIPCI-------FDPHGRAGICGNWLLGSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 138 ~~p~~~~v~RW~~A~P~~~~g~~~~-------~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
..|....+++|.++.|.+.+++... ....++|++||||+.|.++++|+.||.++|++|+..+.++
T Consensus 405 ~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~gv~gA~~SG~~aA~~i~~~l~~~ 476 (478)
T 2ivd_A 405 ARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHLIGNAYKGVGLNDCIRNAAQLADALVAGNTSH 476 (478)
T ss_dssp SCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEECSTTTSCCSHHHHHHHHHHHHHHHCC-----
T ss_pred CCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEEEccCCCCCCHHHHHHHHHHHHHHHHHhhccC
Confidence 2677888999999999998886321 1125799999999988899999999999999998776543
No 8
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.61 E-value=1.1e-14 Score=133.75 Aligned_cols=152 Identities=14% Similarity=0.131 Sum_probs=102.6
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCCh-HHHHHHhh-------------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGL-PQIARQMK------------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~-~~la~~L~------------------- 107 (246)
++|+++++|++|...+++| |..+ +..+.||.||+|+|++.+.+||+.... +.....+.
T Consensus 204 ~~i~~~~~V~~i~~~~~~v-V~~~-g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~ 281 (421)
T 3nrn_A 204 GKILTRKEVVEINIEEKKV-YTRD-NEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPR 281 (421)
T ss_dssp CEEESSCCEEEEETTTTEE-EETT-CCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCS
T ss_pred CEEEcCCeEEEEEEECCEE-EEeC-CcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCcc
Confidence 6999999999999988899 7544 447899999999999999999973111 12221111
Q ss_pred --------h-----------------------------hCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCc
Q 043717 108 --------E-----------------------------NIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGA 150 (246)
Q Consensus 108 --------~-----------------------------~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~ 150 (246)
. ..+..+++++++.++++|+++++ . ++...+++|+.
T Consensus 282 ~~~~~~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p-~------~~~~~~~~~~~ 354 (421)
T 3nrn_A 282 IGNTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFP-E------GEPLLAQVYRD 354 (421)
T ss_dssp SCSSEEECTTSSSCEEECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCT-T------CEEEEEEEC--
T ss_pred cCCeEEEcCCcceeeEeccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcC-C------CeEEEeeeccC
Confidence 0 00123445668999999999998 2 35567899999
Q ss_pred cCCCCCCCC--CCccCCCCCEEEEcCCCCCC-CH--HHHHHHHHHHHHHHHHHhcCCCCCccchhcccCCcccccccc
Q 043717 151 ALPTNTPSI--PCIFDPHGRAGICGNWLLGS-SV--ESAALSGMALANHIADYLGSGGVRPEEFAVGLHNEFQLLEGH 223 (246)
Q Consensus 151 A~P~~~~g~--~~~~~~~~gL~laGDw~~G~-~i--e~Av~SG~~aA~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 223 (246)
++|++.... ...... +||++||||+.++ ++ |+|+.||.++|++| + ++=+.+|-|+|-|
T Consensus 355 ~~p~~~~~~~~~~~~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l-------~-------~~~~~~~~~~~~~ 417 (421)
T 3nrn_A 355 GNPVNRTRAGLHIEWPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL-------N-------LGSFSEWYLLEHH 417 (421)
T ss_dssp -----------CCCCCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT-------T-------SCCCCTTTC----
T ss_pred CCCcccccCCCCCCCCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh-------C-------cCchhhhhhhhhc
Confidence 999985432 111455 9999999999999 66 99999999999998 1 3346789999875
No 9
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.59 E-value=1.4e-13 Score=113.31 Aligned_cols=195 Identities=24% Similarity=0.374 Sum_probs=129.7
Q ss_pred cccccCCCCceeccCCceeeeCChhHHh----HHHcCceeccccC--------------------CCC----------cc
Q 043717 2 GTRMIGPQPLIFDHAAQFFTVTDSRFMS----WLMVGWREVWCDH--------------------GKT----------SM 47 (246)
Q Consensus 2 atrR~~~~~~~~DhGAqyft~~~~~f~~----~~~~g~~~~W~~~--------------------g~p----------~m 47 (246)
+|+|.++. .+|||+|||+++++.|.. +...+....+... +.. ..
T Consensus 42 ~~~~~~~~--~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (336)
T 3kkj_A 42 SSKRSDAG--ALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRGD 119 (336)
T ss_dssp CEEEETTE--EEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSSTHHHHHHHHTT
T ss_pred cccccCCc--eeecCccccccCcHHHHHHHHHHHhccccccccccccccccccccccccccceeecccccccchhccccc
Confidence 46666643 799999999999999876 5556666555421 000 11
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc-eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhh-------------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK-PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMK------------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g-~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~------------------- 107 (246)
..+....+........+.+.+....+ .......++.+.........+... .........
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (336)
T 3kkj_A 120 MPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLLAAA-PKLASVVAGVKMDPTWAVALAFETPLQT 198 (336)
T ss_dssp CCEECSCCEEEEEECSSCEEEEETTSCEEEEESCEEECSCHHHHGGGGTTC-HHHHHHHTTCCEEEEEEEEEEESSCCSC
T ss_pred ceeecceeecccccccccccccccccccccccccceeccccchhhhhhccc-ccccccccccccccchhhhhcccccccc
Confidence 34555666666666666666655333 333455666666665554444332 111100000
Q ss_pred ----------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeee
Q 043717 108 ----------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHL 147 (246)
Q Consensus 108 ----------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~R 147 (246)
....+.......+.....+...++.. ...|.+..++|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 275 (336)
T 3kkj_A 199 PMQGCFVQDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCT---MPAPVFSLAHR 275 (336)
T ss_dssp CCCEEEECSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSC---CCCCSEEEEEE
T ss_pred ccccccccccccccccccccccccccccccceeccccccccccccccchhhhhhhhhhhhhhccCC---cCcchheeccc
Confidence 11224455666666777766666543 35788999999
Q ss_pred cCccCCCCCCCCCCccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 148 WGAALPTNTPSIPCIFDPHGRAGICGNWLLGSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 148 W~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
|+++.|.........++..++|++||||+.|++|++|+.||+.||+.|++.|+.+
T Consensus 276 w~~a~~~~~~~~~~~~~~~~~v~l~GDa~~g~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 276 WLYARPAGAHEWGALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp EEEEEESSCCCCSSEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred eeecccccccCccceeeCCCCEEEEecccCCcCHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999998888777777888999999999999999999999999999999998764
No 10
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.56 E-value=6.1e-15 Score=138.27 Aligned_cols=151 Identities=20% Similarity=0.177 Sum_probs=116.6
Q ss_pred eeeecCceeeEEEEeCCe------EEEEeC--Cc---eeeccCEEEEcCCHHHHHHhhc-----cCChHHH---------
Q 043717 48 VSIVRPCWISNLEPFNGM------WHLREN--VK---PRGQFDVVVIAHNGKCANWLLG-----SSGLPQI--------- 102 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~------w~l~~~--~g---~~~~aD~VVlA~Pa~~A~~LL~-----~~~~~~l--------- 102 (246)
.+|+++++|++|...+++ |.|+.. +| ..+.||+||+|+|++.+.+|+. +...+.+
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~~~~l~~~~~~~~~ 335 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVDYVPLS 335 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCCCTTSCCCCEEEEE
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCcccHHHHhcCCCCceE
Confidence 479999999999998777 888763 34 4678999999999999999882 1100000
Q ss_pred -----------H---------------------------HHhh--------------------hhCCCCCHHHHHHHHHH
Q 043717 103 -----------A---------------------------RQMK--------------------ENIPTATAEKVKKGMLE 124 (246)
Q Consensus 103 -----------a---------------------------~~L~--------------------~~~~~~~~eel~~~ll~ 124 (246)
. +.+. ......+++++.+.+++
T Consensus 336 ~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~ 415 (504)
T 1sez_A 336 VVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTS 415 (504)
T ss_dssp EEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHH
T ss_pred EEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHH
Confidence 0 0000 01124588999999999
Q ss_pred HHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCc-------cCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHH
Q 043717 125 GVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCI-------FDPHGRAGICGNWLLGSSVESAALSGMALANHIAD 197 (246)
Q Consensus 125 eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~-------~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~ 197 (246)
+|++++|... .|..+.++||.+++|+|.+|+... ....++|++||+|+.|.++++|+.||.++|++|++
T Consensus 416 ~L~~~~g~~~----~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~~g~~v~gai~sG~~aA~~il~ 491 (504)
T 1sez_A 416 DLKQLLGAEG----EPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAADLVIS 491 (504)
T ss_dssp HHHHHHCBCS----CCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCC----CCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999998642 688899999999999999987321 23468999999999999999999999999999999
Q ss_pred HhcCC
Q 043717 198 YLGSG 202 (246)
Q Consensus 198 ~l~~~ 202 (246)
.+...
T Consensus 492 ~l~~~ 496 (504)
T 1sez_A 492 YLESV 496 (504)
T ss_dssp HHSSC
T ss_pred HHhhc
Confidence 88654
No 11
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.38 E-value=1.1e-12 Score=121.18 Aligned_cols=148 Identities=16% Similarity=0.094 Sum_probs=106.8
Q ss_pred eeeecCceeeEEEEeCCe-EEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHH-HHHHhh------------------
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQ-IARQMK------------------ 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~-la~~L~------------------ 107 (246)
.+|+++++|++|...+++ |.|.++ +..+.||+||+|+|+..+.+|+....++. ....+.
T Consensus 227 ~~i~~~~~V~~i~~~~~~~v~v~~~-~~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~ 305 (453)
T 2yg5_A 227 DDVFLNAPVRTVKWNESGATVLADG-DIRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPF 305 (453)
T ss_dssp GGEECSCCEEEEEEETTEEEEEETT-TEEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGEEECCEEEEEEEESSCG
T ss_pred CcEEcCCceEEEEEeCCceEEEEEC-CeEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCC
Confidence 489999999999999888 998874 44779999999999998888762211221 111111
Q ss_pred --------------------------h----------------hCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeee
Q 043717 108 --------------------------E----------------NIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRV 145 (246)
Q Consensus 108 --------------------------~----------------~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v 145 (246)
. .....+++++.+.++++|+++++.. ..+|..+.+
T Consensus 306 w~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~---~~~p~~~~~ 382 (453)
T 2yg5_A 306 WREDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPK---AEEPVVYYE 382 (453)
T ss_dssp GGGGTEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGG---GGCCSEEEE
T ss_pred CCCCCCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCcc---CCCccEEEE
Confidence 0 0002468899999999999999853 236788889
Q ss_pred eecCc---cC----CCCCCCC-----CCccCCCCCEEEEcCCCC---CCCHHHHHHHHHHHHHHHHHHh
Q 043717 146 HLWGA---AL----PTNTPSI-----PCIFDPHGRAGICGNWLL---GSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 146 ~RW~~---A~----P~~~~g~-----~~~~~~~~gL~laGDw~~---G~~ie~Av~SG~~aA~~l~~~l 199 (246)
++|.. +. +.+.+|+ +.+..+.++|++||+++. .++|++|+.||.++|++|++.+
T Consensus 383 ~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 383 SDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp CCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred eecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHh
Confidence 99973 22 2334442 123456689999999974 3489999999999999998765
No 12
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.35 E-value=4.9e-12 Score=119.38 Aligned_cols=152 Identities=15% Similarity=0.083 Sum_probs=109.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHH-HHHHhh-------------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQ-IARQMK------------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~-la~~L~------------------- 107 (246)
++|+++++|++|...+++|.|.+.+|..+.||+||+|+|+..+.+|+-...++. ....+.
T Consensus 227 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (520)
T 1s3e_A 227 DRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFW 306 (520)
T ss_dssp GGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGG
T ss_pred CcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcc
Confidence 479999999999998889999887776789999999999999888752211111 111110
Q ss_pred -------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceee
Q 043717 108 -------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTR 144 (246)
Q Consensus 108 -------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~ 144 (246)
......+++++.+.++++|++++|... ...|..+.
T Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~--~~~p~~~~ 384 (520)
T 1s3e_A 307 RKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLE--ALEPVHYE 384 (520)
T ss_dssp GGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGG--GGCCSEEE
T ss_pred cCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCccc--cCCccEEE
Confidence 001135789999999999999998531 23688888
Q ss_pred eeecCcc---C----CCCCCCCC-----CccCCCCCEEEEcCCC---CCCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 145 VHLWGAA---L----PTNTPSIP-----CIFDPHGRAGICGNWL---LGSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 145 v~RW~~A---~----P~~~~g~~-----~~~~~~~gL~laGDw~---~G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
+++|... . +.+.+|+. .+..+.++|++||+++ ..+++++|+.||.++|++|+..+..
T Consensus 385 ~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 385 EKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp EEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhc
Confidence 9999642 1 12334421 2334557999999987 3458999999999999999998754
No 13
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.35 E-value=8.5e-12 Score=116.40 Aligned_cols=152 Identities=15% Similarity=0.156 Sum_probs=111.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhcc--CChHH-HHHHhh-----------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGS--SGLPQ-IARQMK----------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~--~~~~~-la~~L~----------------- 107 (246)
.+|+++++|++|...+++|.|.+.+|..+.+|+||+|+|+..+..++.. ..++. ....+.
T Consensus 229 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~ 308 (472)
T 1b37_A 229 PRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRK 308 (472)
T ss_dssp TTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSC
T ss_pred cEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCc
Confidence 4799999999999998899998877767899999999999999886521 11221 111111
Q ss_pred --hh--------------------------------------------CCCCCHHHHHHHHHHHHHHHh-CCCCCCCCCC
Q 043717 108 --EN--------------------------------------------IPTATAEKVKKGMLEGVEAAL-GRPKGSLQKP 140 (246)
Q Consensus 108 --~~--------------------------------------------~~~~~~eel~~~ll~eL~~ll-g~~~~~~~~p 140 (246)
+. ....+++++.+.++++|++++ |.. ..+|
T Consensus 309 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~---~~~~ 385 (472)
T 1b37_A 309 FWPEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKD---VPDA 385 (472)
T ss_dssp CSCCSTTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSC---CCCC
T ss_pred CCCCCCCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCC---CCCC
Confidence 00 002468899999999999999 542 2356
Q ss_pred ceeeeeec------CccCCCCCCCCCC-----ccCCCCCEEEEcCCCC---CCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 141 IYTRVHLW------GAALPTNTPSIPC-----IFDPHGRAGICGNWLL---GSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 141 ~~~~v~RW------~~A~P~~~~g~~~-----~~~~~~gL~laGDw~~---G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
....+++| +.+.+.+.+|+.. +..+.++|++||+++. +++|++|+.||.++|++|+..+.+.
T Consensus 386 ~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~ 461 (472)
T 1b37_A 386 TDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKK 461 (472)
T ss_dssp SEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 77778999 4444445556531 2356689999999986 5599999999999999999877543
No 14
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.32 E-value=5.3e-12 Score=118.09 Aligned_cols=151 Identities=14% Similarity=0.053 Sum_probs=107.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHH-HHHHhh-------------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQ-IARQMK------------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~-la~~L~------------------- 107 (246)
++|+++++|++|...+++|.|.+.+|..+.||+||+|+|+..+.+|+-...++. ....+.
T Consensus 271 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~ 350 (495)
T 2vvm_A 271 LGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDM 350 (495)
T ss_dssp EEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGG
T ss_pred eEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccC
Confidence 669999999999988888999887776789999999999999888752111221 111111
Q ss_pred ----------------------h-----------hCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecC-----
Q 043717 108 ----------------------E-----------NIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWG----- 149 (246)
Q Consensus 108 ----------------------~-----------~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~----- 149 (246)
+ ......+++..+.++++|+++++. ...|..+.+++|.
T Consensus 351 ~~~~g~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~~~~~~e~~~~~~~~L~~~~~~----~~~~~~~~~~~W~~dp~~ 426 (495)
T 2vvm_A 351 RSWTGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNSANHIQPDEDVRETLKAVGQLAPG----TFGVKRLVFHNWVKDEFA 426 (495)
T ss_dssp GGEEEEECSSCSSCEEEEEEECTTSCEEEEEEECSTTCCCTTTCHHHHHHHHHTTSTT----SCCEEEEEECCTTTCTTT
T ss_pred CCceeEecCCCCcEEEecCCCCCCCCeEEEEEeCccccCCCHHHHHHHHHHHHHhcCC----CCCceEEEEeEcCCCCCC
Confidence 0 000124456678889999887653 1367788899994
Q ss_pred -ccCCCCCCCCC-----CccCCCCCEEEEcCCCC---CCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 150 -AALPTNTPSIP-----CIFDPHGRAGICGNWLL---GSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 150 -~A~P~~~~g~~-----~~~~~~~gL~laGDw~~---G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
.+.+.+.+|.. .+..+.++|++||+++. .+++|+|++||.++|++|+..+.+.
T Consensus 427 ~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~~ 488 (495)
T 2vvm_A 427 KGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGTK 488 (495)
T ss_dssp SSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhccc
Confidence 34444445532 12356789999999986 4699999999999999999988654
No 15
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.31 E-value=1.2e-11 Score=115.59 Aligned_cols=149 Identities=11% Similarity=0.057 Sum_probs=107.0
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc---eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhh-----------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK---PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMK----------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g---~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~----------------- 107 (246)
.+|+++++|++|...+++|.|.+.++ ..+.||+||+|+|+..+..|+.... +.....+.
T Consensus 252 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~l~-~~~~~~l~~~~~~~~~kv~l~~~~~ 330 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGRLQNNLP-GDVLTALKAAKPSSSGKLGIEYSRR 330 (489)
T ss_dssp GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTTSEECCC-HHHHHHHHTEECCCEEEEEEEESSC
T ss_pred CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHhCccCCC-HHHHHHHHhCCCccceEEEEEeCCC
Confidence 46999999999999999999877443 5679999999999998888765321 11111111
Q ss_pred ------------------------h----------------------hCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCc
Q 043717 108 ------------------------E----------------------NIPTATAEKVKKGMLEGVEAALGRPKGSLQKPI 141 (246)
Q Consensus 108 ------------------------~----------------------~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~ 141 (246)
. .....+++++.+.++++|+++++... ...|.
T Consensus 331 ~w~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~--~~~~~ 408 (489)
T 2jae_A 331 WWETEDRIYGGASNTDKDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIAEGSEIHGEKY--TRDIS 408 (489)
T ss_dssp HHHHTTCCCSCEEEESSTTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHHHHHHHHCGGG--GSSEE
T ss_pred CccCCCCcccccccCCCCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHHHHHHHcCcch--hhhcc
Confidence 0 00034789999999999999997510 12566
Q ss_pred eeeeeecCccCCCCCCC--------------CC-----CccCCCCCEEEEcCCC--CCCCHHHHHHHHHHHHHHHHHHhc
Q 043717 142 YTRVHLWGAALPTNTPS--------------IP-----CIFDPHGRAGICGNWL--LGSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 142 ~~~v~RW~~A~P~~~~g--------------~~-----~~~~~~~gL~laGDw~--~G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
...+++|.+.. +..| .. .+..+.++|++||+++ .++++++|+.||.++|++|+..+.
T Consensus 409 ~~~~~~W~~~~--~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG~~~~~~~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 409 SSFSGSWRRTK--YSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAGDHLSNAIAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp EEEEEEGGGST--TTSCSSCEETTC-------CCHHHHHHTSCBTTEEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEcCCCC--CCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeEHHhccCccHHHHHHHHHHHHHHHHHHHHh
Confidence 77789997652 2222 11 1224567999999987 478999999999999999998765
Q ss_pred C
Q 043717 201 S 201 (246)
Q Consensus 201 ~ 201 (246)
.
T Consensus 487 ~ 487 (489)
T 2jae_A 487 Q 487 (489)
T ss_dssp C
T ss_pred h
Confidence 4
No 16
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.28 E-value=2.2e-12 Score=120.47 Aligned_cols=146 Identities=10% Similarity=0.073 Sum_probs=108.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhh--------------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMK-------------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~-------------------- 107 (246)
++|+++++|++|...++++. +.+|..+.||+||+|+|.+.+.++|...........|.
T Consensus 237 ~~i~~~~~V~~I~~~~~~v~--~~~G~~~~ad~vI~t~P~~~l~~~l~~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~ 314 (513)
T 4gde_A 237 TRFGEKGKVTKVNANNKTVT--LQDGTTIGYKKLVSTMAVDFLAEAMNDQELVGLTKQLFYSSTHVIGVGVRGSRPERIG 314 (513)
T ss_dssp EEESGGGCEEEEETTTTEEE--ETTSCEEEEEEEEECSCHHHHHHHTTCHHHHHHHTTCCEEEEEEEEEEEESSCCTTTT
T ss_pred eeeecceEEEEEEccCCEEE--EcCCCEEECCEEEECCCHHHHHHhcCchhhHhhhhcccCCceEEEEEEEecccccccc
Confidence 58999999999988776654 46676889999999999999999987421111111110
Q ss_pred -----------------------------------------------------------------hhCCCCCHHHHHHHH
Q 043717 108 -----------------------------------------------------------------ENIPTATAEKVKKGM 122 (246)
Q Consensus 108 -----------------------------------------------------------------~~~~~~~~eel~~~l 122 (246)
......++|++++.+
T Consensus 315 ~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~ 394 (513)
T 4gde_A 315 DKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADC 394 (513)
T ss_dssp TCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHH
T ss_pred ccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHH
Confidence 001135789999999
Q ss_pred HHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCcc------CCCCCEEEEc---CCCCC-CCHHHHHHHHHHHH
Q 043717 123 LEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIF------DPHGRAGICG---NWLLG-SSVESAALSGMALA 192 (246)
Q Consensus 123 l~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~------~~~~gL~laG---Dw~~G-~~ie~Av~SG~~aA 192 (246)
+++|.+++++.. .+.+....++||++|.|+|..++.... -..+||++|| .|-.- ..++.|+.+|+.+|
T Consensus 395 ~~~L~~~~~i~~--~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa 472 (513)
T 4gde_A 395 IQGLVNTEMLKP--TDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQDKDIWSRGRFGSWRYEVGNQDHSFMLGVEAV 472 (513)
T ss_dssp HHHHHHTTSSCT--TCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTEEECSTTTTCCGGGCSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCC--ccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhhcCcEEecCCcccCcCCCCHHHHHHHHHHHH
Confidence 999999998753 124567889999999999999974221 1226999999 55433 47999999999999
Q ss_pred HHHHH
Q 043717 193 NHIAD 197 (246)
Q Consensus 193 ~~l~~ 197 (246)
+.|++
T Consensus 473 ~~I~~ 477 (513)
T 4gde_A 473 DNIVN 477 (513)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99986
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.27 E-value=5.6e-12 Score=118.84 Aligned_cols=141 Identities=6% Similarity=-0.012 Sum_probs=106.5
Q ss_pred eeecC--ceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhcc----CChHHHHHHhh---------------
Q 043717 49 SIVRP--CWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGS----SGLPQIARQMK--------------- 107 (246)
Q Consensus 49 ~I~l~--t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~----~~~~~la~~L~--------------- 107 (246)
+|+++ ++|++|.+.+++|++ .+|..+.||+||+|+|++++.+||.. . .+.+...+.
T Consensus 230 ~i~~~~~~~V~~I~~~~~~v~~--~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~-~~~~~~~l~~l~y~s~~~v~l~~~ 306 (484)
T 4dsg_A 230 KLTFNSGFQAIAIDADAKTITF--SNGEVVSYDYLISTVPFDNLLRMTKGTGFKG-YDEWPAIADKMVYSSTNVIGIGVK 306 (484)
T ss_dssp GEEECGGGCEEEEETTTTEEEE--TTSCEEECSEEEECSCHHHHHHHEECSSCTT-GGGHHHHHHHCCEEEEEEEEEEEE
T ss_pred eEEECCCceeEEEEecCCEEEE--CCCCEEECCEEEECCCHHHHHHHhhccCCCC-CHHHHHHHhCCCcCceEEEEEEEc
Confidence 79999 569999988888865 45557899999999999999999864 2 122211111
Q ss_pred -------------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCC
Q 043717 108 -------------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQ 138 (246)
Q Consensus 108 -------------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~ 138 (246)
......+++++++.++++|.++.++.. .
T Consensus 307 ~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~~~~~~---~ 383 (484)
T 4dsg_A 307 GTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSESKYKPVNHSTLIEDCIVGCLASNLLLP---E 383 (484)
T ss_dssp SCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEBTTBCCCTTSHHHHHHHHHHHTTSCCT---T
T ss_pred CCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecCcCCcCCHHHHHHHHHHHHHHcCCCCc---c
Confidence 001135789999999999999876642 1
Q ss_pred CC-ceeeeeecCccCCCCCCCCCCc-------cCCCCCEEEEcC---CCCCC-CHHHHHHHHHHHHHHHH
Q 043717 139 KP-IYTRVHLWGAALPTNTPSIPCI-------FDPHGRAGICGN---WLLGS-SVESAALSGMALANHIA 196 (246)
Q Consensus 139 ~p-~~~~v~RW~~A~P~~~~g~~~~-------~~~~~gL~laGD---w~~G~-~ie~Av~SG~~aA~~l~ 196 (246)
.+ ....++||+++.|+|.++|... .... ||++||. |..|+ ++++||.||.++|++|+
T Consensus 384 ~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 384 DLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp CCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred ceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 23 3457999999999999997521 1234 9999998 77775 99999999999999987
No 18
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.27 E-value=9.4e-11 Score=114.57 Aligned_cols=149 Identities=16% Similarity=0.123 Sum_probs=107.5
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCC------ceeeccCEEEEcCCHHHHHHhh------ccCChHH-HHHHhh-------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENV------KPRGQFDVVVIAHNGKCANWLL------GSSGLPQ-IARQMK------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~------g~~~~aD~VVlA~Pa~~A~~LL------~~~~~~~-la~~L~------- 107 (246)
++|++|++|++|...+++|.|++.+ +..+.||+||+|+|+..+.++. +. +|. ....+.
T Consensus 411 l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~--LP~~k~~Ai~~l~~g~~ 488 (662)
T 2z3y_A 411 LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPP--LPEWKTSAVQRMGFGNL 488 (662)
T ss_dssp CEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESC--CCHHHHHHHHHSEECCC
T ss_pred CceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCC--CCHHHHHHHHhCCccce
Confidence 6899999999999999999987643 4578999999999999988742 22 222 111111
Q ss_pred -----------------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCC
Q 043717 108 -----------------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPK 134 (246)
Q Consensus 108 -----------------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~ 134 (246)
......+++++.+.+++.|+++||...
T Consensus 489 ~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~ 568 (662)
T 2z3y_A 489 NKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSA 568 (662)
T ss_dssp EEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCSSSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTS
T ss_pred eEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCCCCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcc
Confidence 001145789999999999999998632
Q ss_pred CCCCCCceeeeeecCcc------CCCCCCCCCC-----c-------------cCCCCCEEEEcCCCCC---CCHHHHHHH
Q 043717 135 GSLQKPIYTRVHLWGAA------LPTNTPSIPC-----I-------------FDPHGRAGICGNWLLG---SSVESAALS 187 (246)
Q Consensus 135 ~~~~~p~~~~v~RW~~A------~P~~~~g~~~-----~-------------~~~~~gL~laGDw~~G---~~ie~Av~S 187 (246)
.++|..+.++||... .....+|... + ....++|++||+++.. +++++|+.|
T Consensus 569 --~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~S 646 (662)
T 2z3y_A 569 --VPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLS 646 (662)
T ss_dssp --SCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHH
T ss_pred --cCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHH
Confidence 247888899999763 1112233210 1 1123689999999874 599999999
Q ss_pred HHHHHHHHHHHhc
Q 043717 188 GMALANHIADYLG 200 (246)
Q Consensus 188 G~~aA~~l~~~l~ 200 (246)
|.++|++|++.+.
T Consensus 647 G~raA~~i~~~~~ 659 (662)
T 2z3y_A 647 GLREAGRIADQFL 659 (662)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcc
Confidence 9999999998763
No 19
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.24 E-value=1.3e-10 Score=116.66 Aligned_cols=152 Identities=16% Similarity=0.116 Sum_probs=108.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCC------ceeeccCEEEEcCCHHHHHHhhccC----ChHH-HHHHhh---------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENV------KPRGQFDVVVIAHNGKCANWLLGSS----GLPQ-IARQMK--------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~------g~~~~aD~VVlA~Pa~~A~~LL~~~----~~~~-la~~L~--------- 107 (246)
++|++|++|++|...+++|.|++.+ +..+.||+||+|+|...+.+++... .+|. ....+.
T Consensus 582 l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~K 661 (852)
T 2xag_A 582 LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNK 661 (852)
T ss_dssp CCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEE
T ss_pred CCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEE
Confidence 5899999999999999999987643 4578999999999999998753211 1222 111111
Q ss_pred ---------------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCC
Q 043717 108 ---------------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGS 136 (246)
Q Consensus 108 ---------------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~ 136 (246)
......+++++.+.++++|+++||...
T Consensus 662 V~L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~-- 739 (852)
T 2xag_A 662 VVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSA-- 739 (852)
T ss_dssp EEEECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECSSSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTT--
T ss_pred EEEEcCCcccCCCCCeeeeeccccCCCCceEEEecCCCCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccc--
Confidence 001135789999999999999998642
Q ss_pred CCCCceeeeeecCcc------CCCCCCCCCC-----c-------------cCCCCCEEEEcCCCC---CCCHHHHHHHHH
Q 043717 137 LQKPIYTRVHLWGAA------LPTNTPSIPC-----I-------------FDPHGRAGICGNWLL---GSSVESAALSGM 189 (246)
Q Consensus 137 ~~~p~~~~v~RW~~A------~P~~~~g~~~-----~-------------~~~~~gL~laGDw~~---G~~ie~Av~SG~ 189 (246)
.++|..+.++||... .....+|... + ....++|++||+++. .+.+++|+.||.
T Consensus 740 ~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~ 819 (852)
T 2xag_A 740 VPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGL 819 (852)
T ss_dssp CCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHH
T ss_pred cCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHH
Confidence 247888999999863 2222233210 1 122368999999986 459999999999
Q ss_pred HHHHHHHHHhcC
Q 043717 190 ALANHIADYLGS 201 (246)
Q Consensus 190 ~aA~~l~~~l~~ 201 (246)
++|++|+..+..
T Consensus 820 RAA~~Il~~l~~ 831 (852)
T 2xag_A 820 REAGRIADQFLG 831 (852)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhhC
Confidence 999999987743
No 20
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.18 E-value=2.7e-10 Score=113.45 Aligned_cols=147 Identities=12% Similarity=0.056 Sum_probs=105.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHh----hccCChHHHHHHhh----------------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWL----LGSSGLPQIARQMK---------------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~L----L~~~~~~~la~~L~---------------- 107 (246)
++|+++++|++|+..+++|.|.+.+|..+.||+||+|+|+..+... .+... +.....+.
T Consensus 544 l~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp-~~~~~ai~~l~~g~~~KV~l~f~~ 622 (776)
T 4gut_A 544 LDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLS-EKKMKAINSLGAGIIEKIALQFPY 622 (776)
T ss_dssp SCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCC-HHHHHHHHHEEEECCEEEEEECSS
T ss_pred CcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCC-HHHHHHHHhCCCeeEEEEEEecCc
Confidence 6899999999999998899998877767899999999999988652 22221 11111111
Q ss_pred --------------------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCC
Q 043717 108 --------------------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSL 137 (246)
Q Consensus 108 --------------------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~ 137 (246)
......+++++.+.++++|+++||... .
T Consensus 623 ~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~--~ 700 (776)
T 4gut_A 623 RFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQE--V 700 (776)
T ss_dssp CTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSC--C
T ss_pred ccccccCCCCceEEeecCCcCCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCccc--c
Confidence 000146899999999999999998532 3
Q ss_pred CCCceeeeeecCccCCC---C---CCCCC-----CccCC-CCCEEEEcCCCC---CCCHHHHHHHHHHHHHHHHH
Q 043717 138 QKPIYTRVHLWGAALPT---N---TPSIP-----CIFDP-HGRAGICGNWLL---GSSVESAALSGMALANHIAD 197 (246)
Q Consensus 138 ~~p~~~~v~RW~~A~P~---~---~~g~~-----~~~~~-~~gL~laGDw~~---G~~ie~Av~SG~~aA~~l~~ 197 (246)
+.|..+.+++|...-.. | .+|.. .+..+ ..+|++||+++. .+.|++|++||.++|++|++
T Consensus 701 ~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 701 PDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred cCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 47888999999753211 1 11211 11122 468999999997 45999999999999999974
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.16 E-value=4.7e-10 Score=104.91 Aligned_cols=150 Identities=10% Similarity=0.085 Sum_probs=104.3
Q ss_pred eeecCceeeEEEEeCCeEEEEeCCce----eeccCEEEEcCCHHHHHHhh--ccCChHHHHHHhh---------------
Q 043717 49 SIVRPCWISNLEPFNGMWHLRENVKP----RGQFDVVVIAHNGKCANWLL--GSSGLPQIARQMK--------------- 107 (246)
Q Consensus 49 ~I~l~t~V~~I~~~~~~w~l~~~~g~----~~~aD~VVlA~Pa~~A~~LL--~~~~~~~la~~L~--------------- 107 (246)
+|+++++|++|...+++|.|.+.++. .+.||+||+|+|+..+..|+ +... +.....+.
T Consensus 254 ~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp-~~~~~ai~~l~~~~~~kv~l~~~ 332 (498)
T 2iid_A 254 KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLL-PKKAHALRSVHYRSGTKIFLTCT 332 (498)
T ss_dssp GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEES
T ss_pred ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHhheecCCCCC-HHHHHHHHhCCCcceeEEEEEeC
Confidence 79999999999999889998774442 36899999999999877763 2221 11111111
Q ss_pred -------------------------h---------------------hCCCCCHHHHHHHHHHHHHHHhCCCCCCCC-CC
Q 043717 108 -------------------------E---------------------NIPTATAEKVKKGMLEGVEAALGRPKGSLQ-KP 140 (246)
Q Consensus 108 -------------------------~---------------------~~~~~~~eel~~~ll~eL~~llg~~~~~~~-~p 140 (246)
. .....+++++.+.++++|++++|++.+... .+
T Consensus 333 ~~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~~ 412 (498)
T 2iid_A 333 TKFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSFC 412 (498)
T ss_dssp SCGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHHE
T ss_pred CCCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhhhhhc
Confidence 0 011257889999999999999985320000 01
Q ss_pred ceeeeeecCccCCCCCCCCC-------------CccCCCCCEEEEcCCCC--CCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 141 IYTRVHLWGAALPTNTPSIP-------------CIFDPHGRAGICGNWLL--GSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 141 ~~~~v~RW~~A~P~~~~g~~-------------~~~~~~~gL~laGDw~~--G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
....+++|.. ++|..|+. .+..+.++|++||+++. .+.+++|+.||.++|++|+..+..
T Consensus 413 ~~~~~~~W~~--~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 413 YPSVIQKWSL--DKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp EEEEEEEGGG--CTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccEEEecCC--CCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 2356899975 44544431 11245679999999983 468999999999999999998853
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.12 E-value=1.2e-10 Score=106.57 Aligned_cols=140 Identities=12% Similarity=0.088 Sum_probs=97.3
Q ss_pred eeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCCh-HHHHHHhh--------------------
Q 043717 49 SIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGL-PQIARQMK-------------------- 107 (246)
Q Consensus 49 ~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~-~~la~~L~-------------------- 107 (246)
+|+++++|++|.+.+++|.|.+++|. +.||+||+|+|+.++.++++.... ..+...+.
T Consensus 219 ~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
T 2b9w_A 219 PAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKFLDYSDADDDEREYFSKIIHQQYMVDACLVKEYPTISGY 297 (424)
T ss_dssp CCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHHTTSBCCCHHHHHHHTTCEEEEEEEEEEEESSCCSSEEE
T ss_pred eEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHHhhccCCCHHHHHHHhcCCcceeEEEEEEeccCCccccc
Confidence 68999999999998889998887764 789999999999999888764310 01111000
Q ss_pred ------------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCcc
Q 043717 108 ------------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGAA 151 (246)
Q Consensus 108 ------------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~A 151 (246)
....+.+++++.+.++++|.+ ++.+ .+..+....|.+
T Consensus 298 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~-l~~~-----~~~~~~~~~w~~- 370 (424)
T 2b9w_A 298 VPDNMRPERLGHVMVYYHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMET-FGHP-----VEKIIEEQTWYY- 370 (424)
T ss_dssp CGGGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHH-TTCC-----EEEEEEEEEEEE-
T ss_pred ccCCCCCcCCCcceEEeeecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHH-cCCc-----ccccccccceee-
Confidence 001135678999999999998 6642 122333446643
Q ss_pred CC-----CCCCCCCC---ccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Q 043717 152 LP-----TNTPSIPC---IFDPHGRAGICGNWLLGSSVESAALSGMALANHIA 196 (246)
Q Consensus 152 ~P-----~~~~g~~~---~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~ 196 (246)
.| ++..|+.. .....++|++||+|+..+.+|+|++||.++|++|+
T Consensus 371 ~p~~~~~~~~~G~~~~~~~~~~~~~l~~aG~~~~~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 371 FPHVSSEDYKAGWYEKVEGMQGRRNTFYAGEIMSFGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EEECCHHHHHTTHHHHHHHTTTGGGEEECSGGGSCSSHHHHHHHHHHHHHHHT
T ss_pred eeccCHHHHhccHHHHHHHHhCCCCceEeccccccccHHHHHHHHHHHHHHhc
Confidence 33 22233211 11345799999999999999999999999999875
No 23
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.01 E-value=5e-10 Score=104.50 Aligned_cols=48 Identities=15% Similarity=0.022 Sum_probs=35.3
Q ss_pred eeeecCceeeEEEEeCCeEE-EEeCCceeeccCEEEEcCCHHHHHH-hhc
Q 043717 48 VSIVRPCWISNLEPFNGMWH-LRENVKPRGQFDVVVIAHNGKCANW-LLG 95 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~-l~~~~g~~~~aD~VVlA~Pa~~A~~-LL~ 95 (246)
++|+++++|++|...++++. |++.+|+.+.||.||++++++.+.. |++
T Consensus 236 g~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 236 GEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------
T ss_pred CceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhcc
Confidence 58999999999999999986 7777787889999999999887754 554
No 24
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.66 E-value=1.5e-07 Score=85.83 Aligned_cols=142 Identities=14% Similarity=0.058 Sum_probs=91.1
Q ss_pred eeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHH----HHHhh-----------------
Q 043717 49 SIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQI----ARQMK----------------- 107 (246)
Q Consensus 49 ~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~l----a~~L~----------------- 107 (246)
+|+++++|++|+..++++.|.+.+|..+.||.||+|+|++.+..+.-...++.. ...+.
T Consensus 219 ~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~~ 298 (431)
T 3k7m_X 219 EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRRIVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEAG 298 (431)
T ss_dssp CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGGSEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCTT
T ss_pred ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhheeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCcC
Confidence 899999999999988899998877766899999999999888776421112221 11110
Q ss_pred ------------------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCc---cC--
Q 043717 108 ------------------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGA---AL-- 152 (246)
Q Consensus 108 ------------------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~---A~-- 152 (246)
....+..++ +.+.+.|+++++. . .|.....++|.. +.
T Consensus 299 i~~~~d~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~---~~~~~~l~~~~~~----~-~~~~~~~~~W~~d~~~~G~ 370 (431)
T 3k7m_X 299 IECVGDGIFPTLYDYCEVSESERLLVAFTDSGSFDPTDI---GAVKDAVLYYLPE----V-EVLGIDYHDWIADPLFEGP 370 (431)
T ss_dssp EEEEBSSSSSEEEEEEECSSSEEEEEEEEETTTCCTTCH---HHHHHHHHHHCTT----C-EEEEEECCCTTTCTTTSSS
T ss_pred ceEcCCCCEEEEEeCcCCCCCCeEEEEEeccccCCCCCH---HHHHHHHHHhcCC----C-CccEeEecccCCCCCCCCC
Confidence 000111122 2355666666642 1 355566789953 11
Q ss_pred -CCCCCCCC-----CccCCCCCEEEEcCCCC---CCCHHHHHHHHHHHHHHHHHH
Q 043717 153 -PTNTPSIP-----CIFDPHGRAGICGNWLL---GSSVESAALSGMALANHIADY 198 (246)
Q Consensus 153 -P~~~~g~~-----~~~~~~~gL~laGDw~~---G~~ie~Av~SG~~aA~~l~~~ 198 (246)
....+|.. .+..+..+|++||..+. .+.|++|++||.++|++|+.+
T Consensus 371 ~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 371 WVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp SCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred CCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 11223321 23355679999995443 459999999999999999864
No 25
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.59 E-value=6.8e-07 Score=84.15 Aligned_cols=44 Identities=11% Similarity=0.012 Sum_probs=38.5
Q ss_pred eeecCceeeEEEEe-CCeEEEEeCCceeeccCEEEEcCCHHHHHH
Q 043717 49 SIVRPCWISNLEPF-NGMWHLRENVKPRGQFDVVVIAHNGKCANW 92 (246)
Q Consensus 49 ~I~l~t~V~~I~~~-~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~ 92 (246)
+|+++++|++|... ++++.|.+.+|..+.||+||+|+|+..+..
T Consensus 216 ~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~ 260 (516)
T 1rsg_A 216 WLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQSVLNL 260 (516)
T ss_dssp GEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHHHHHG
T ss_pred EEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHHHhhh
Confidence 59999999999986 677999887776789999999999998853
No 26
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.72 E-value=3e-05 Score=63.79 Aligned_cols=85 Identities=16% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCHHHHHHHHHHHHHHHhCCCCCCCCCCcee--eeeecCc---cCCC---CCCCCC-----CccCCCCCEEEEcCCCC--
Q 043717 113 ATAEKVKKGMLEGVEAALGRPKGSLQKPIYT--RVHLWGA---ALPT---NTPSIP-----CIFDPHGRAGICGNWLL-- 177 (246)
Q Consensus 113 ~~~eel~~~ll~eL~~llg~~~~~~~~p~~~--~v~RW~~---A~P~---~~~g~~-----~~~~~~~gL~laGDw~~-- 177 (246)
++++++.+.++++|++++|.. ...+... .+++|.. +.-. ..+|.. .+..+..+|++||+.+.
T Consensus 54 l~~~e~~~~~l~~L~~~~g~~---~~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~ts~~ 130 (181)
T 2e1m_C 54 FDDAERYGYALENLQSVHGRR---IEVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGEHVSLK 130 (181)
T ss_dssp SCTTTTHHHHHHHHHHHHCGG---GGGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSGGGTTS
T ss_pred CCHHHHHHHHHHHHHHHhCCC---cHhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEHHHcCC
Confidence 345677889999999999742 1123345 7899953 2211 122321 12345679999999988
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhc
Q 043717 178 GSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 178 G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
.+.|++|++||.++|++|+..+.
T Consensus 131 ~g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 131 HAWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp TTSHHHHHHHHHHHHHHHHTCCC
T ss_pred ccCHHHHHHHHHHHHHHHHHHhc
Confidence 77999999999999999998664
No 27
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.18 E-value=0.00094 Score=65.90 Aligned_cols=50 Identities=20% Similarity=0.157 Sum_probs=38.9
Q ss_pred CCCCEEEEcCCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCccchhcccCCccccc
Q 043717 165 PHGRAGICGNWLL--GSSVESAALSGMALANHIADYLGSGGVRPEEFAVGLHNEFQLL 220 (246)
Q Consensus 165 ~~~gL~laGDw~~--G~~ie~Av~SG~~aA~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 220 (246)
...+|++|||.+. ++-+|+|+.||.++|..|...+... . ..+|..+|..+
T Consensus 643 ~~gri~fAGe~~S~~~GWieGAl~Sa~~Aa~~i~~~~~~~--~----~~~~~~~~~~~ 694 (721)
T 3ayj_A 643 LDNRFFIASDSYSHLGGWLEGAFMSALNAVAGLIVRANRG--D----VSALSTEARPL 694 (721)
T ss_dssp TCCCEEECSGGGSSCTTSHHHHHHHHHHHHHHHHHHHTTT--C----GGGBCTTTTHH
T ss_pred CCCCEEEeehhhccCCceehHHHHHHHHHHHHHHHHhcCC--C----CcccCccchhc
Confidence 4568999999875 5589999999999999999988654 2 35666655443
No 28
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.32 E-value=0.005 Score=54.54 Aligned_cols=142 Identities=13% Similarity=0.097 Sum_probs=86.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHH--HHHhhccC-C-hHH---------HHHHhh-------
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKC--ANWLLGSS-G-LPQ---------IARQMK------- 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~--A~~LL~~~-~-~~~---------la~~L~------- 107 (246)
++|+++++|++|...+++|.|.++++ .+.+|.||+|+.+.. ..+.+... . .+. ....+.
T Consensus 179 ~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 257 (382)
T 1ryi_A 179 AEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPLTKTLYHDH 257 (382)
T ss_dssp CEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCCCCCEEEEEEEEEEECCSSCCCSEEEETT
T ss_pred CEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCCCceeccceEEEEECCCCCCccceEEcCC
Confidence 68999999999998888898877766 789999999998743 22222100 0 000 000000
Q ss_pred -------------------hhCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCcc--CCC
Q 043717 108 -------------------ENIPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIF--DPH 166 (246)
Q Consensus 108 -------------------~~~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~--~~~ 166 (246)
.......+++..+.+++.+.++++.- ... -.++.|....|...-+.+.+- ...
T Consensus 258 ~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l----~~~--~~~~~w~g~~~~t~d~~p~ig~~~~~ 331 (382)
T 1ryi_A 258 CYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAI----QNM--KVDRFWAGLRPGTKDGKPYIGRHPED 331 (382)
T ss_dssp EEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGG----GGS--EEEEEEEEEEEECSSSCCEEEEETTE
T ss_pred EEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCc----CCC--ceeeEEEEecccCCCCCcEeccCCCc
Confidence 00011233456688899999988621 111 235667554444333333222 224
Q ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHHH
Q 043717 167 GRAGICGNWLLGSSVESAALSGMALANHIAD 197 (246)
Q Consensus 167 ~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~ 197 (246)
++|++|+. +.|.++.-|..+|+.+|+.|..
T Consensus 332 ~~l~~~~G-~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 332 SRILFAAG-HFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp EEEEEEEC-CSSCTTTTHHHHHHHHHHHHTT
T ss_pred CCEEEEEc-CCcchHHHhHHHHHHHHHHHhC
Confidence 68998766 4567888899999999988763
No 29
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.93 E-value=0.0021 Score=53.82 Aligned_cols=140 Identities=16% Similarity=0.063 Sum_probs=71.9
Q ss_pred ceeeecCceeeEEEEeCCe-EEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHH
Q 043717 47 MVSIVRPCWISNLEPFNGM-WHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEG 125 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~-w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~e 125 (246)
.++++ +++|++|...+++ +.|.++++..+.+|.||+|+-......++....... . ...-..+..++ .+.
T Consensus 83 gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G~~~~~-~----g~~g~~~~~~l----~~~ 152 (232)
T 2cul_A 83 PLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLGGVVEE-A----GRLSEASYPDL----LED 152 (232)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEETTEEES-E----EETTEECCSHH----HHH
T ss_pred CcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecCCccCC-C----CCCcccchhhh----CHH
Confidence 46777 5799999988777 467676666789999999998743322221110000 0 00000111122 222
Q ss_pred HHHHhCCCCCCC--------CCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHH
Q 043717 126 VEAALGRPKGSL--------QKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGSSVESAALSGMALANHIAD 197 (246)
Q Consensus 126 L~~llg~~~~~~--------~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~ 197 (246)
|.+. |+..... ..|.+ ...|....++.........+..|+||+|||-...+....++.+|+.+|+.|.+
T Consensus 153 l~~~-g~~~~~~~~~~~~~~g~p~~--~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a~~g~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 153 LSRL-GFRFVEREGEVPETPSTPGY--RVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCVREGDYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp HHHT-TCCEEEEEEEEC-----CCE--EEEEEEECGGGEETTTTEETTSBSEEECGGGTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHhC-CCeEEccccccCcCCCCCCc--cCchhhcccCCCCCccccccccccceeeeecccCccHHHHHHHHHHHHHHHHh
Confidence 2222 2210000 01111 11111111110000011124789999999988334888889999999999987
Q ss_pred Hh
Q 043717 198 YL 199 (246)
Q Consensus 198 ~l 199 (246)
.+
T Consensus 230 ~l 231 (232)
T 2cul_A 230 EL 231 (232)
T ss_dssp HC
T ss_pred hc
Confidence 65
No 30
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=95.59 E-value=0.042 Score=46.86 Aligned_cols=105 Identities=12% Similarity=0.025 Sum_probs=66.7
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeC---Cce--eeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLREN---VKP--RGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKG 121 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~---~g~--~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ 121 (246)
.++++++++|.+|...++...|... +|. .+++|.||+++.......++
T Consensus 204 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~--------------------------- 256 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFA--------------------------- 256 (323)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHH---------------------------
T ss_pred CcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHH---------------------------
Confidence 4799999999999887554445442 242 67899999997631110111
Q ss_pred HHHHHHHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCC----CCHHHHHHHHHHHHHHHH
Q 043717 122 MLEGVEAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLG----SSVESAALSGMALANHIA 196 (246)
Q Consensus 122 ll~eL~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G----~~ie~Av~SG~~aA~~l~ 196 (246)
+.+|+.. .. -++.+. ..+.+..++||.+||-... ..+..|+.+|..+|..|.
T Consensus 257 ------~~~g~~~----~~~g~i~vd-------------~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~ 313 (323)
T 3f8d_A 257 ------KSNGIET----DTNGYIKVD-------------EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAY 313 (323)
T ss_dssp ------HHTTCCB----CTTSSBCCC-------------TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred ------hhcCeee----cCCCcEecC-------------CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHH
Confidence 1122210 00 011111 1123456899999998874 489999999999999998
Q ss_pred HHhcC
Q 043717 197 DYLGS 201 (246)
Q Consensus 197 ~~l~~ 201 (246)
..+..
T Consensus 314 ~~l~~ 318 (323)
T 3f8d_A 314 RYVTE 318 (323)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87743
No 31
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=95.35 E-value=0.012 Score=53.31 Aligned_cols=58 Identities=7% Similarity=0.019 Sum_probs=43.8
Q ss_pred eecC-ccCCCCCCCCC---C-------ccCCCCCEEEEcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 043717 146 HLWG-AALPTNTPSIP---C-------IFDPHGRAGICGNW--LLGSSVESAALSGMALANHIADYLGSGG 203 (246)
Q Consensus 146 ~RW~-~A~P~~~~g~~---~-------~~~~~~gL~laGDw--~~G~~ie~Av~SG~~aA~~l~~~l~~~~ 203 (246)
..|. ...|.|++... . +....++|++||.| +.+..+|+||+||+++|++|++.+...+
T Consensus 304 ~~~~~~~~p~ypv~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~~~~~~d~i~sa~~~a~~~~~~~~~~~ 374 (384)
T 2bi7_A 304 RACEENDIPYYPIRQMGEMALLEKYLSLAENETNITFVGRLGTYRYLDMDVTIAEALKTAEVYLNSLTENQ 374 (384)
T ss_dssp EECCTTCCCCEECCCHHHHHHHHHHHHHHTTCSSEEECHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccccCCCccccccCChhHHHHHHHHHHHHhcCCCEEEccccEEEEeCCHHHHHHHHHHHHHHHhhhhhccC
Confidence 4674 55677666421 1 11344899999997 6789999999999999999998887765
No 32
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.33 E-value=0.057 Score=46.42 Aligned_cols=106 Identities=13% Similarity=-0.021 Sum_probs=66.5
Q ss_pred ceeeecCceeeEEEEeCCeE-EEEeCC-----ceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHH
Q 043717 47 MVSIVRPCWISNLEPFNGMW-HLRENV-----KPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKK 120 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w-~l~~~~-----g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~ 120 (246)
.++|+++++|.+|...+++. .|...+ +..+.+|.||+|+.......++..
T Consensus 223 gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~------------------------ 278 (338)
T 3itj_A 223 KIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG------------------------ 278 (338)
T ss_dssp TEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT------------------------
T ss_pred CeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC------------------------
Confidence 47899999999999876543 243322 356789999999874211111110
Q ss_pred HHHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCC--CCHHHHHHHHHHHHHHHHHH
Q 043717 121 GMLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLG--SSVESAALSGMALANHIADY 198 (246)
Q Consensus 121 ~ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G--~~ie~Av~SG~~aA~~l~~~ 198 (246)
++.. .+ .. ... +....+.+..|+||.|||-..+ ..+..|+.+|..+|..|...
T Consensus 279 ----------~l~~----~~-------~G--~i~--v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (338)
T 3itj_A 279 ----------QVDT----DE-------AG--YIK--TVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKY 333 (338)
T ss_dssp ----------TBCB----CT-------TS--CBC--CCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------ceEe----cC-------CC--cEE--EcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHH
Confidence 1100 00 00 000 0001123456899999999864 48999999999999999988
Q ss_pred hcC
Q 043717 199 LGS 201 (246)
Q Consensus 199 l~~ 201 (246)
+..
T Consensus 334 l~~ 336 (338)
T 3itj_A 334 LTS 336 (338)
T ss_dssp HTT
T ss_pred Hhc
Confidence 753
No 33
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.30 E-value=0.033 Score=47.82 Aligned_cols=105 Identities=11% Similarity=-0.030 Sum_probs=66.5
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCC-----ceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENV-----KPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGM 122 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~-----g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~l 122 (246)
++++++++|.+|...++...|...+ +..+.+|.||+++.-.....+++.
T Consensus 204 v~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~-------------------------- 257 (332)
T 3lzw_A 204 VNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKN-------------------------- 257 (332)
T ss_dssp CEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGG--------------------------
T ss_pred eEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhh--------------------------
Confidence 7999999999998866544444322 356789999999873211111111
Q ss_pred HHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCC---CCC-CHHHHHHHHHHHHHHHHHH
Q 043717 123 LEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWL---LGS-SVESAALSGMALANHIADY 198 (246)
Q Consensus 123 l~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~---~G~-~ie~Av~SG~~aA~~l~~~ 198 (246)
+++.. +--++.+.. .+.+..|+||.|||-. .++ .+..|+.+|..+|+.|...
T Consensus 258 -------~~~~~----~~g~i~vd~-------------~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 313 (332)
T 3lzw_A 258 -------WGLDI----EKNSIVVKS-------------TMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAY 313 (332)
T ss_dssp -------SSCCE----ETTEEECCT-------------TSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -------cCccc----cCCeEEeCC-------------CCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHh
Confidence 12110 000111111 1224568999999987 333 8999999999999999998
Q ss_pred hcCC
Q 043717 199 LGSG 202 (246)
Q Consensus 199 l~~~ 202 (246)
+...
T Consensus 314 l~~~ 317 (332)
T 3lzw_A 314 MDPK 317 (332)
T ss_dssp HCTT
T ss_pred hChh
Confidence 8654
No 34
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.03 E-value=0.11 Score=43.98 Aligned_cols=108 Identities=9% Similarity=-0.069 Sum_probs=66.3
Q ss_pred ceeeecCceeeEEEEeCCe---EEEEeCCc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHH
Q 043717 47 MVSIVRPCWISNLEPFNGM---WHLRENVK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKG 121 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~---w~l~~~~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ 121 (246)
.++|+++++|.+|...+++ ..+...+| ..+++|.||+|+.......++...
T Consensus 197 gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~------------------------ 252 (315)
T 3r9u_A 197 KIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQD------------------------ 252 (315)
T ss_dssp TEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCT------------------------
T ss_pred CeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcc------------------------
Confidence 4799999999999887754 33333345 368899999998742211222210
Q ss_pred HHHHHHHHhC-CCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCC-C-CCHHHHHHHHHHHHHHHHHH
Q 043717 122 MLEGVEAALG-RPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLL-G-SSVESAALSGMALANHIADY 198 (246)
Q Consensus 122 ll~eL~~llg-~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~-G-~~ie~Av~SG~~aA~~l~~~ 198 (246)
+.+| +.. ..--++.+- ..+.+..|+||.|||-.. + ..+..|+.+|..+|..|...
T Consensus 253 ------~~~g~l~~---~~~g~i~vd-------------~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 310 (315)
T 3r9u_A 253 ------DSKFLCNM---EEGGQVSVD-------------LKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAY 310 (315)
T ss_dssp ------TSCBSSCB---CTTSCBCCC-------------TTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ------cccceeee---cCCCcEEeC-------------CCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHH
Confidence 0011 100 000001110 122345689999999874 3 48999999999999999887
Q ss_pred hc
Q 043717 199 LG 200 (246)
Q Consensus 199 l~ 200 (246)
+.
T Consensus 311 l~ 312 (315)
T 3r9u_A 311 IE 312 (315)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 35
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.65 E-value=0.2 Score=42.80 Aligned_cols=38 Identities=16% Similarity=0.059 Sum_probs=32.8
Q ss_pred CCCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHhcC
Q 043717 164 DPHGRAGICGNWLLGS--SVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
+..|+||.+||-.... .+..|+.+|..+|..|...+..
T Consensus 276 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 276 TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp CSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHHHh
Confidence 5568999999998763 8899999999999999988853
No 36
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=94.22 E-value=0.29 Score=43.54 Aligned_cols=107 Identities=8% Similarity=-0.027 Sum_probs=70.6
Q ss_pred cceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHH
Q 043717 46 SMVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEG 125 (246)
Q Consensus 46 ~m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~e 125 (246)
.+++|+++++|..++..++...+.+++|+.+++|.||+++|.. +..++.
T Consensus 215 ~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~-~~~~~~------------------------------ 263 (401)
T 3vrd_B 215 ALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQR-AGKIAQ------------------------------ 263 (401)
T ss_dssp CSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEE-ECHHHH------------------------------
T ss_pred cCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcC-CchhHh------------------------------
Confidence 3479999999999998877777777777788999999987621 001111
Q ss_pred HHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC----CHHHHHHHHHHHHHHHHHHhcC
Q 043717 126 VEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS----SVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 126 L~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~----~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
-.++.. +--++.|-. +....+.+|+||.+||-+.+. +...|...|.-+|+.|+..+.-
T Consensus 264 ---~~gl~~----~~G~i~VD~-----------~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G 325 (401)
T 3vrd_B 264 ---SASLTN----DSGWCPVDI-----------RTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKG 325 (401)
T ss_dssp ---HTTCCC----TTSSBCBCT-----------TTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---hccccc----cCCCEEECC-----------CcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 011110 001111110 011235678999999987653 6789999999999999988753
No 37
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=94.00 E-value=0.041 Score=49.32 Aligned_cols=52 Identities=8% Similarity=0.008 Sum_probs=39.1
Q ss_pred eecC-ccCCCCCCCCCC-------c---cCCCCCEEEEcCC--CCCCCHHHHHHHHHHHHHHHHH
Q 043717 146 HLWG-AALPTNTPSIPC-------I---FDPHGRAGICGNW--LLGSSVESAALSGMALANHIAD 197 (246)
Q Consensus 146 ~RW~-~A~P~~~~g~~~-------~---~~~~~gL~laGDw--~~G~~ie~Av~SG~~aA~~l~~ 197 (246)
..|. ...|+|++.+.. + ....++|++||.| +.+..+|+||+||+++|++|++
T Consensus 301 ~~~~~~~~p~ypv~~~~~~~~~~~~~~~~~~~~~~~~~Gr~~~~~y~~~~d~i~sa~~~a~~~~~ 365 (367)
T 1i8t_A 301 LEWKVGDEPYYPVNDNKNMELFKKYRELASREDKVIFGGRLAEYKYYDMHQVISAALYQVKNIMS 365 (367)
T ss_dssp EECCTTSCCCEECCSHHHHHHHHHHHHHHHHCTTEEECSTTTTTSCCCHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCeeecccCChhHHHHHHHHHHHHhcCCCEEEcccceeeEecCHHHHHHHHHHHHHHHhc
Confidence 4565 556777765421 1 1335899999988 8899999999999999999874
No 38
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=93.97 E-value=0.016 Score=52.61 Aligned_cols=37 Identities=11% Similarity=0.054 Sum_probs=32.0
Q ss_pred CCEEEEcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 043717 167 GRAGICGNW--LLGSSVESAALSGMALANHIADYLGSGG 203 (246)
Q Consensus 167 ~gL~laGDw--~~G~~ie~Av~SG~~aA~~l~~~l~~~~ 203 (246)
++|++||+| +.+..+|+||+||+++|++|.+.....+
T Consensus 353 ~~v~~~G~~~~~~~~~~e~~i~sa~~~a~~l~~~~~~~~ 391 (399)
T 1v0j_A 353 SKVLFGGRLGTYQYLDMHMAIASALNMYDNVLAPHLRDG 391 (399)
T ss_dssp HCEEECHHHHHTCCCCHHHHHHHHHHHHHHTHHHHHHHC
T ss_pred CCEEEccceEEEEecCHHHHHHHHHHHHHHHhhhhhccC
Confidence 799999997 7889999999999999999987554443
No 39
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=93.78 E-value=0.24 Score=42.56 Aligned_cols=39 Identities=10% Similarity=-0.118 Sum_probs=32.7
Q ss_pred CCCCCEEEEcCCCCC--CCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 164 DPHGRAGICGNWLLG--SSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 164 ~~~~gL~laGDw~~G--~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
+..|+||.+||-... ..+..|+..|..+|..|...+...
T Consensus 274 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (325)
T 2q7v_A 274 TNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLAAL 314 (325)
T ss_dssp CSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 446899999999875 489999999999999998877543
No 40
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.77 E-value=0.46 Score=41.44 Aligned_cols=105 Identities=14% Similarity=0.053 Sum_probs=65.9
Q ss_pred eeeecCceeeEEEEeCCe---EEEEeCCc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGM---WHLRENVK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGM 122 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~---w~l~~~~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~l 122 (246)
++|+++++|.+|...+++ ..+...+| ..+++|.||+++.......+++.
T Consensus 217 v~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~-------------------------- 270 (360)
T 3ab1_A 217 IDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLAR-------------------------- 270 (360)
T ss_dssp EEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGG--------------------------
T ss_pred eEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHh--------------------------
Confidence 789999999999987664 33332244 56799999999873111111111
Q ss_pred HHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCC----CCHHHHHHHHHHHHHHHHHH
Q 043717 123 LEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLG----SSVESAALSGMALANHIADY 198 (246)
Q Consensus 123 l~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G----~~ie~Av~SG~~aA~~l~~~ 198 (246)
+++.. .--++.+.. .+.+..|+||.+||-... ..+..|+..|..+|+.|...
T Consensus 271 -------~~~~~----~~g~i~vd~-------------~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~ 326 (360)
T 3ab1_A 271 -------WDLEL----YENALVVDS-------------HMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSY 326 (360)
T ss_dssp -------SSCCE----ETTEEECCT-------------TSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHH
T ss_pred -------hcccc----ccCeeeecC-------------CCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhh
Confidence 11110 001111111 122456899999998742 37889999999999999988
Q ss_pred hcCC
Q 043717 199 LGSG 202 (246)
Q Consensus 199 l~~~ 202 (246)
+...
T Consensus 327 l~~~ 330 (360)
T 3ab1_A 327 IKPG 330 (360)
T ss_dssp HSCC
T ss_pred cCCc
Confidence 7543
No 41
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=93.42 E-value=0.078 Score=46.42 Aligned_cols=140 Identities=16% Similarity=0.093 Sum_probs=81.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHH--HHHhhccC--C------------hHH-HH-HH----
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKC--ANWLLGSS--G------------LPQ-IA-RQ---- 105 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~--A~~LL~~~--~------------~~~-la-~~---- 105 (246)
++|+++++|++|...+++|.|.++++ .+.+|.||+|+-+.. ..+.+... . .+. .. ..
T Consensus 169 v~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~p~rg~~~~~~~~~~~~~~~~p~~ 247 (381)
T 3nyc_A 169 GQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGIDCHDWPML 247 (381)
T ss_dssp CEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCCCCCCEEEEEEEEEECCCTTCCCTTCCEE
T ss_pred CEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCCCCceeeeEEEEEEECCCcCCCcCccceE
Confidence 68999999999999999999988777 789999999998754 22222110 0 000 00 00
Q ss_pred h--h------------------hh--C-CC-CCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCC
Q 043717 106 M--K------------------EN--I-PT-ATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPC 161 (246)
Q Consensus 106 L--~------------------~~--~-~~-~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~ 161 (246)
+ . +. . .+ .+++..++.+++.+.++..+.. .-.++.|.--.|..+-+.+.
T Consensus 248 ~~~~~~~y~~p~~g~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~w~G~r~~t~D~~p~ 320 (381)
T 3nyc_A 248 VSLDESFYLKPDAGMLLGSPANADPVEAHDVQPEQLDIATGMYLIEEATTLTI-------RRPEHTWAGLRSFVADGDLV 320 (381)
T ss_dssp EETTSSCEEEEETTEEEEECCCCEECCSSCCCCCHHHHHHHHHHHHHHBSCCC-------CCCSEEEEEEEEECTTSCCE
T ss_pred EeCCCCEEEEeCCCcEEEeCCcCCCCCcccCCCChHHHHHHHHHHHhcCCCcc-------cceeeeeEEccccCCCCCce
Confidence 0 0 00 0 01 1223344666777766543321 11245565444443333332
Q ss_pred cc--CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Q 043717 162 IF--DPHGRAGICGNWLLGSSVESAALSGMALANHIA 196 (246)
Q Consensus 162 ~~--~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~ 196 (246)
+- ...++|+++.- +.|.++--|...|+.+|+.|.
T Consensus 321 ig~~~~~~~l~~a~G-~~g~G~~~ap~~g~~la~~i~ 356 (381)
T 3nyc_A 321 AGYAANAEGFFWVAA-QGGYGIQTSAAMGEASAALIR 356 (381)
T ss_dssp EEECTTSTTEEEEEC-CTTCTTTTHHHHHHHHHHHHT
T ss_pred ecCCCCCCCeEEEEc-CCChhHhhCHHHHHHHHHHHh
Confidence 21 34578887644 445677778888998888775
No 42
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=93.38 E-value=0.51 Score=40.53 Aligned_cols=106 Identities=14% Similarity=0.055 Sum_probs=65.5
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeC---Cc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLREN---VK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKG 121 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~---~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ 121 (246)
.++++++++|.+|...++...|.+. +| ..+++|.||+++.-.....+++.
T Consensus 205 gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~------------------------- 259 (335)
T 2zbw_A 205 RLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLAN------------------------- 259 (335)
T ss_dssp SSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGG-------------------------
T ss_pred CeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhh-------------------------
Confidence 3789999999999885432234332 44 56799999999873211111211
Q ss_pred HHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCC----CCHHHHHHHHHHHHHHHHH
Q 043717 122 MLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLG----SSVESAALSGMALANHIAD 197 (246)
Q Consensus 122 ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G----~~ie~Av~SG~~aA~~l~~ 197 (246)
+++.. .--++.+.. .+.+..|+||.+||-... ..+..|+..|..+|+.|..
T Consensus 260 --------~~~~~----~~g~i~vd~-------------~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~ 314 (335)
T 2zbw_A 260 --------WGLAL----EKNKIKVDT-------------TMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAA 314 (335)
T ss_dssp --------SCCCE----ETTEEECCT-------------TCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred --------cceec----cCCeeeeCC-------------CCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHH
Confidence 11110 001111211 122456899999998742 3788999999999999998
Q ss_pred HhcCC
Q 043717 198 YLGSG 202 (246)
Q Consensus 198 ~l~~~ 202 (246)
.+...
T Consensus 315 ~l~~~ 319 (335)
T 2zbw_A 315 YANPA 319 (335)
T ss_dssp HHCTT
T ss_pred Hhhhh
Confidence 88544
No 43
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=92.83 E-value=0.54 Score=43.77 Aligned_cols=139 Identities=20% Similarity=0.148 Sum_probs=82.2
Q ss_pred eeeecCceeeEEEEeCC----eEEEEeCCc---eeeccCEEEEcCCHHH-HHHhhccC-----------------ChHHH
Q 043717 48 VSIVRPCWISNLEPFNG----MWHLRENVK---PRGQFDVVVIAHNGKC-ANWLLGSS-----------------GLPQI 102 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~----~w~l~~~~g---~~~~aD~VVlA~Pa~~-A~~LL~~~-----------------~~~~l 102 (246)
++|+++++|++|+..++ +|.+...++ .++.+|.||.|.-+.. .+++|.-. ..+..
T Consensus 135 v~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~ 214 (535)
T 3ihg_A 135 GAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGI 214 (535)
T ss_dssp CEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGT
T ss_pred CEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhh
Confidence 79999999999999988 888876433 5788999999987643 44444210 00000
Q ss_pred H-H-H-----h-h-----------------------hh----CCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeee
Q 043717 103 A-R-Q-----M-K-----------------------EN----IPTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHL 147 (246)
Q Consensus 103 a-~-~-----L-~-----------------------~~----~~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~R 147 (246)
. . . + . .. ..+.+++ .+.+.+++.++.+. .......+..
T Consensus 215 ~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e----~~~~~l~~~~~~~~---~~~~~~~~~~ 287 (535)
T 3ihg_A 215 MEPGTTGWYYLHHPEFKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQ----RCVELIGLALDAPE---VKPELVDIQG 287 (535)
T ss_dssp SCTTCCEEEEEECSSCEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHH----HHHHHHHHHHTCSS---CCCEEEEEEE
T ss_pred ccCCceEEEEEECCCceEEEEEecCCCEEEEEEeeCccccCccccCCHH----HHHHHHHHHhCCCC---CceeEEEeeE
Confidence 0 0 0 0 0 00 0112333 34555666776421 1233344555
Q ss_pred cCccCCCCCCCCCCccCCCCCEEEEcCCCC------CCCHHHHHHHHHHHHHHHHHHh
Q 043717 148 WGAALPTNTPSIPCIFDPHGRAGICGNWLL------GSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 148 W~~A~P~~~~g~~~~~~~~~gL~laGDw~~------G~~ie~Av~SG~~aA~~l~~~l 199 (246)
|+..... ... -...+++++||... |-+++-|+.++..+|..|...+
T Consensus 288 ~~~~~~~-----a~~-~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l 339 (535)
T 3ihg_A 288 WEMAARI-----AER-WREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVL 339 (535)
T ss_dssp EEEEEEE-----ESC-SEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeEEE-----ECc-cccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHh
Confidence 5432210 000 11268999999863 5599999999999999887654
No 44
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=92.59 E-value=0.19 Score=48.83 Aligned_cols=91 Identities=14% Similarity=0.070 Sum_probs=62.6
Q ss_pred eeeecCceeeEEEEeCCeEEEEe---CCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE---NVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLE 124 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~---~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~ 124 (246)
++|+++++|.+|... +..+.. +++..+.+|.||+|+... +.. ++..
T Consensus 582 V~i~~~~~V~~i~~~--~~~v~~~~~~~~~~i~aD~VV~A~G~~------p~~-------------------~l~~---- 630 (690)
T 3k30_A 582 VARVTDHAVVAVGAG--GVTVRDTYASIERELECDAVVMVTARL------PRE-------------------ELYL---- 630 (690)
T ss_dssp CEEEESEEEEEEETT--EEEEEETTTCCEEEEECSEEEEESCEE------ECC-------------------HHHH----
T ss_pred CEEEcCcEEEEEECC--eEEEEEccCCeEEEEECCEEEECCCCC------CCh-------------------HHHH----
Confidence 799999999999753 344442 244578999999998631 111 1111
Q ss_pred HHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 043717 125 GVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 125 eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
++.... . .+..++||.+||......+..|+.+|..+|..|...+.
T Consensus 631 ~l~~~~--------~-----------------------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 631 DLVARR--------D-----------------------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp HHHHHH--------H-----------------------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCC
T ss_pred HHhhhh--------c-----------------------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhcc
Confidence 111000 0 23457999999999888999999999999999987653
No 45
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.55 E-value=0.13 Score=44.66 Aligned_cols=42 Identities=10% Similarity=-0.156 Sum_probs=35.5
Q ss_pred eeeecCceeeEEEEeCCe-EEEEeCCc--eeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRENVK--PRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~~~g--~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|...+++ |.|.+++| ..+.+|.||+|+-+..
T Consensus 165 v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 165 AQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp CEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred CEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 789999999999998766 98887665 4789999999998763
No 46
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.45 E-value=0.14 Score=49.49 Aligned_cols=42 Identities=19% Similarity=0.269 Sum_probs=37.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|...+++|.|.+.+|..+.+|.||+|+-+..
T Consensus 432 v~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 432 LQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp CEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred CEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 799999999999999999999886655789999999998773
No 47
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.44 E-value=0.19 Score=46.75 Aligned_cols=106 Identities=11% Similarity=0.025 Sum_probs=68.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|...++...+.++++..+++|.||+++... +.. ++ .
T Consensus 272 V~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~------p~~-------------------~l--------~ 318 (493)
T 1y56_A 272 IDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR------PDI-------------------NP--------I 318 (493)
T ss_dssp CEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE------ECC-------------------HH--------H
T ss_pred cEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC------cCc-------------------hH--------H
Confidence 79999999999987655455666666678999999997631 110 11 1
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+.+|+.. . ... +.-++..+ ..+. ..++||.+||-.....+..|+..|+.+|..|...+.
T Consensus 319 ~~~g~~~------~---~~~-~g~i~~vd---~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~lg 377 (493)
T 1y56_A 319 TQAGGKL------R---FRR-GYYSPVLD---EYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEFG 377 (493)
T ss_dssp HHTTCCE------E---EET-TEEEECCC---TTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred HhcCCCc------c---ccC-Cceeeccc---cccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHcC
Confidence 2233310 0 000 00011000 0111 357899999998878899999999999999988763
No 48
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.43 E-value=0.17 Score=45.56 Aligned_cols=47 Identities=11% Similarity=-0.049 Sum_probs=39.6
Q ss_pred eeeecCc---eeeEEEEeCCeEE-EEeCCceeeccCEEEEcCCHHHHHHhhc
Q 043717 48 VSIVRPC---WISNLEPFNGMWH-LRENVKPRGQFDVVVIAHNGKCANWLLG 95 (246)
Q Consensus 48 ~~I~l~t---~V~~I~~~~~~w~-l~~~~g~~~~aD~VVlA~Pa~~A~~LL~ 95 (246)
++|++++ +|++|...+++|. |.+.+|..+.+|.||+|+-+... .|++
T Consensus 176 v~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~-~l~~ 226 (438)
T 3dje_A 176 VKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG-QFLD 226 (438)
T ss_dssp CEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG-GTSC
T ss_pred CEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh-hhcC
Confidence 7999999 9999999988998 88877767899999999988743 5543
No 49
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=92.27 E-value=1.2 Score=38.55 Aligned_cols=38 Identities=21% Similarity=0.236 Sum_probs=31.7
Q ss_pred CCCEEEEcCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 043717 166 HGRAGICGNWL------LGSSVESAALSGMALANHIADYLGSGG 203 (246)
Q Consensus 166 ~~gL~laGDw~------~G~~ie~Av~SG~~aA~~l~~~l~~~~ 203 (246)
.++++++||.. .|.++.-|+.+|..+|+.|.+.+..+.
T Consensus 276 ~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~ 319 (397)
T 3oz2_A 276 MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESND 319 (397)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCC
Confidence 46899999975 466999999999999999988776553
No 50
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=91.95 E-value=0.2 Score=45.83 Aligned_cols=40 Identities=18% Similarity=0.187 Sum_probs=36.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|...+++|.|.++++ .+.+|.||+|+-..
T Consensus 147 v~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 147 VQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGK 186 (417)
T ss_dssp CEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCS
T ss_pred CEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCc
Confidence 79999999999999989999988777 78999999998864
No 51
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.50 E-value=0.18 Score=43.36 Aligned_cols=40 Identities=13% Similarity=0.212 Sum_probs=35.5
Q ss_pred eeeecCceeeEEEEeCCeEE-EEeCCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWH-LRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~-l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
++++++++|++|...+++|. |.++++ .+.||.||+|+-..
T Consensus 91 ~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 91 LPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp CCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred CEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 57999999999999999999 988777 78999999998853
No 52
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.47 E-value=0.16 Score=49.24 Aligned_cols=46 Identities=11% Similarity=0.140 Sum_probs=38.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCce-eeccCEEEEcCCHHHHHHhh
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKP-RGQFDVVVIAHNGKCANWLL 94 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~-~~~aD~VVlA~Pa~~A~~LL 94 (246)
++|+++++|++|...+++|.|.+++|. .+.+|.||+|+-+. +..|+
T Consensus 427 v~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~-s~~l~ 473 (689)
T 3pvc_A 427 MTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHR-LPEWE 473 (689)
T ss_dssp CEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGG-TTCST
T ss_pred CEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcc-hhccc
Confidence 789999999999999889999887665 67999999999887 33443
No 53
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=91.39 E-value=0.07 Score=46.54 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=31.8
Q ss_pred cCCCCCEEEEcCCCC--------CCCHHHHHHHHHHHHHHHHHHhc
Q 043717 163 FDPHGRAGICGNWLL--------GSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 163 ~~~~~gL~laGDw~~--------G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
.+..||||.|||... |+.+.+++.||+.||+.|++.|+
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 356789999999642 66788999999999999999875
No 54
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.60 E-value=0.19 Score=45.86 Aligned_cols=42 Identities=5% Similarity=-0.179 Sum_probs=33.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|...++++.....+|..+.+|.||+|+|+..
T Consensus 249 ~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 249 GTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp CCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred CEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 589999999999988888763333455789999999999764
No 55
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=90.55 E-value=0.29 Score=43.38 Aligned_cols=40 Identities=13% Similarity=-0.003 Sum_probs=35.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|...+++|.|.++++ .+.+|.||+|+-+.
T Consensus 168 v~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 168 ATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp CEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred CEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 68999999999999888999877666 67999999999765
No 56
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=90.53 E-value=0.22 Score=43.49 Aligned_cols=46 Identities=9% Similarity=-0.002 Sum_probs=37.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhc
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLG 95 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~ 95 (246)
++|+++++|++|...+++|.|.++++ .+.+|.||+|+.++. ..|++
T Consensus 164 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s-~~l~~ 209 (372)
T 2uzz_A 164 CAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV-KDLLP 209 (372)
T ss_dssp CEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG-GGTST
T ss_pred CEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH-Hhhcc
Confidence 68999999999999888899887766 479999999998764 34543
No 57
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=90.37 E-value=0.25 Score=45.03 Aligned_cols=41 Identities=20% Similarity=0.236 Sum_probs=33.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCC---ce---eeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENV---KP---RGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~---g~---~~~aD~VVlA~Pa~ 88 (246)
..|+++++|+.|...+++|.|...+ |. .+.||.||+|+-..
T Consensus 130 ~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~ 176 (447)
T 2gv8_A 130 PFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHY 176 (447)
T ss_dssp GGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSS
T ss_pred CeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCC
Confidence 4689999999999998999987643 44 67899999998763
No 58
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.10 E-value=0.35 Score=41.59 Aligned_cols=40 Identities=13% Similarity=-0.005 Sum_probs=34.6
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++++++++|..|...++.|.|.++++..+.||.||+|+-.
T Consensus 80 ~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~ 119 (335)
T 2zbw_A 80 PVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGV 119 (335)
T ss_dssp CEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTT
T ss_pred CEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCC
Confidence 6788999999999988889998876667899999999865
No 59
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=89.95 E-value=0.39 Score=42.15 Aligned_cols=143 Identities=13% Similarity=0.066 Sum_probs=86.4
Q ss_pred eeeecCceeeEEEEeCCeEE-EEeCCceeeccCEEEEcCCHHH--HHHhhcc---CC-------------hHHHHH-H--
Q 043717 48 VSIVRPCWISNLEPFNGMWH-LRENVKPRGQFDVVVIAHNGKC--ANWLLGS---SG-------------LPQIAR-Q-- 105 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~-l~~~~g~~~~aD~VVlA~Pa~~--A~~LL~~---~~-------------~~~la~-~-- 105 (246)
++|+++++|++|...+++|. |.++++ .+.+|.||+|+-+.. ..+.+.. .. .+.... .
T Consensus 164 v~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 242 (382)
T 1y56_B 164 AKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPIEPYKHQAVITQPIKRGTINPMV 242 (382)
T ss_dssp CEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCCEEEEEEEEEECCCSTTSSCSEE
T ss_pred CEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCCCeeEeEEEEEccCCcccCCCeE
Confidence 68999999999999888888 877766 689999999998653 2333211 00 000000 0
Q ss_pred h-----h------------h--hC------CCCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCC
Q 043717 106 M-----K------------E--NI------PTATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIP 160 (246)
Q Consensus 106 L-----~------------~--~~------~~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~ 160 (246)
+ . - .. ....+++..+.+++.+.++++. +... -.++.|.--.|..+-+.+
T Consensus 243 ~~~~~~~~y~~p~~~g~~iG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~----l~~~--~~~~~~~g~r~~t~d~~p 316 (382)
T 1y56_B 243 ISFKYGHAYLTQTFHGGIIGGIGYEIGPTYDLTPTYEFLREVSYYFTKIIPA----LKNL--LILRTWAGYYAKTPDSNP 316 (382)
T ss_dssp EESTTTTEEEECCSSSCCEEECSCCBSSCCCCCCCHHHHHHHHHHHHHHCGG----GGGS--EEEEEEEEEEEECTTSCC
T ss_pred EecCCCeEEEEEeCCeEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHHhCCC----cCCC--CceEEEEeccccCCCCCc
Confidence 0 0 0 00 0112345567888888888752 1111 224566544444333333
Q ss_pred Ccc--CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 043717 161 CIF--DPHGRAGICGNWLLGSSVESAALSGMALANHIADY 198 (246)
Q Consensus 161 ~~~--~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~ 198 (246)
.+- ...++|+++.= +.|.++--|...|+.+|+.|...
T Consensus 317 ~ig~~~~~~~~~~~~G-~~g~G~~~a~~~g~~la~~i~~~ 355 (382)
T 1y56_B 317 AIGRIEELNDYYIAAG-FSGHGFMMAPAVGEMVAELITKG 355 (382)
T ss_dssp EEEEESSSBTEEEEEC-CTTCHHHHHHHHHHHHHHHHHHS
T ss_pred EeccCCCCCCEEEEEe-cCcchHhhhHHHHHHHHHHHhCC
Confidence 221 33578887743 45678999999999999988753
No 60
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=89.78 E-value=0.39 Score=43.83 Aligned_cols=40 Identities=25% Similarity=0.122 Sum_probs=34.1
Q ss_pred eeeecCceeeEEEEeCCe-EEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|++|...+++ |.|.+.+|..+.+|.||+|+-.
T Consensus 149 V~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg 189 (447)
T 2i0z_A 149 VKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGG 189 (447)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCC
T ss_pred CEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCC
Confidence 799999999999988777 8888776656899999999864
No 61
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=89.69 E-value=0.28 Score=38.51 Aligned_cols=99 Identities=14% Similarity=0.108 Sum_probs=68.4
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++++++ +|++|...+++|.+.++++ .+.+|.||+|+-... .+ .
T Consensus 71 v~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~--~~---------------------------------~ 113 (180)
T 2ywl_A 71 AEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDP--TL---------------------------------P 113 (180)
T ss_dssp CEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCC--HH---------------------------------H
T ss_pred CEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCC--Cc---------------------------------c
Confidence 689999 9999998888899988777 789999999976421 00 1
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHhc
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS--SVESAALSGMALANHIADYLG 200 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+.+|++. . +..+. +. ..+.+..|+||.+||-.... .+..|+..|..+|..|...+.
T Consensus 114 ~~~g~~~---------~----~g~i~---vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 114 SLLGLTR---------R----GAYID---TD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp HHHTCCE---------E----TTEEC---CC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCc---------c----CceEE---eC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhh
Confidence 1223210 0 00000 01 11234568999999988765 788999999999999987764
No 62
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=89.60 E-value=0.34 Score=42.50 Aligned_cols=140 Identities=8% Similarity=-0.014 Sum_probs=84.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccC----C-------------hH-HHHH--Hhh
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSS----G-------------LP-QIAR--QMK 107 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~----~-------------~~-~la~--~L~ 107 (246)
++|+++++|++|...+++|.|.++++ .+.+|.||+|+-+... .|++.. . .+ .+.. .+.
T Consensus 165 v~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~-~l~~~~g~~~pl~~~rg~~~~~~~~~~~~~~~~~~p 242 (389)
T 2gf3_A 165 AKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS-KLLSKLNLDIPLQPYRQVVGFFESDESKYSNDIDFP 242 (389)
T ss_dssp CEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH-HHGGGGTEECCCEEEEEEEEEECCCHHHHBGGGTCC
T ss_pred CEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH-HHhhhhccCCceEEEEEEEEEEecCcccccccccCC
Confidence 68999999999999888899887766 6899999999987543 343221 0 00 1100 000
Q ss_pred -----------------hh--------------CCC---C-C--HHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCc
Q 043717 108 -----------------EN--------------IPT---A-T--AEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGA 150 (246)
Q Consensus 108 -----------------~~--------------~~~---~-~--~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~ 150 (246)
.. .++ . . .++..+.+++.+.++++.- .. ..++.|.-
T Consensus 243 ~~~~~~~~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l----~~---~~~~~w~g 315 (389)
T 2gf3_A 243 GFMVEVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVYPEDESNLRAFLEEYMPGA----NG---ELKRGAVC 315 (389)
T ss_dssp EEEEEETTEEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTSSHHHHHHHHHHHHHHCGGG----CS---CEEEEEEE
T ss_pred EEEEeCCCCcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCCCHHHHHHHHHHHHHhCCCC----CC---CceEEEEE
Confidence 10 000 0 1 3344588888899888631 11 22455643
Q ss_pred cCCCCCCCCCCcc--CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHH
Q 043717 151 ALPTNTPSIPCIF--DPHGRAGICGNWLLGSSVESAALSGMALANHIAD 197 (246)
Q Consensus 151 A~P~~~~g~~~~~--~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~ 197 (246)
-.|..+-+.+.+- ...++|++|.- +.|-++--|...|+.+|+.|..
T Consensus 316 ~r~~t~D~~p~ig~~~~~~~l~~a~G-~~g~G~~~ap~~g~~la~~i~~ 363 (389)
T 2gf3_A 316 MYTKTLDEHFIIDLHPEHSNVVIAAG-FSGHGFKFSSGVGEVLSQLALT 363 (389)
T ss_dssp EEEECTTSCCEEEEETTEEEEEEEEC-CTTCCGGGHHHHHHHHHHHHHH
T ss_pred EeccCCCCCeEEccCCCCCCEEEEEC-CccccccccHHHHHHHHHHHcC
Confidence 3333322333221 23468887753 3455788889999999998875
No 63
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=89.51 E-value=0.34 Score=42.23 Aligned_cols=40 Identities=10% Similarity=0.215 Sum_probs=34.4
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|.+.+++|.|.+.++ .+.||.||+|+-..
T Consensus 103 v~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 103 LNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp CEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred CeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 68999999999999888899987666 57899999998764
No 64
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=88.82 E-value=0.4 Score=42.75 Aligned_cols=41 Identities=12% Similarity=0.048 Sum_probs=36.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|+..+++|.|.+.+|..+.+|.||.|.-..
T Consensus 112 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~ 152 (397)
T 2vou_A 112 ERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGA 152 (397)
T ss_dssp TTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTT
T ss_pred cEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcc
Confidence 68999999999999989999988777678999999998754
No 65
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=88.80 E-value=0.48 Score=42.88 Aligned_cols=39 Identities=21% Similarity=0.249 Sum_probs=33.5
Q ss_pred eeeecCceeeEEEEe----CCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPF----NGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~----~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|++|... +++|.|.++++ .+.+|.||+|+-.
T Consensus 124 v~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~ 166 (401)
T 2gqf_A 124 AKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGG 166 (401)
T ss_dssp CEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCC
T ss_pred CEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCC
Confidence 799999999999877 67799887766 6899999999853
No 66
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=88.60 E-value=0.49 Score=42.15 Aligned_cols=41 Identities=10% Similarity=-0.075 Sum_probs=36.5
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|+..+++|.|.+.+|..+.+|.||.|.-..
T Consensus 140 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 140 DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTT
T ss_pred CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcC
Confidence 68999999999999999999988777778999999998754
No 67
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=88.29 E-value=0.51 Score=40.15 Aligned_cols=40 Identities=15% Similarity=0.128 Sum_probs=34.5
Q ss_pred ceeeecCceeeEEEEeCC-eEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNG-MWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~-~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++++++|..|...++ .|.|.++++. +.||.||+|+-.
T Consensus 81 ~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~ 121 (332)
T 3lzw_A 81 DQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGN 121 (332)
T ss_dssp CCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTT
T ss_pred CCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCC
Confidence 378999999999998876 8999887774 899999999866
No 68
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=88.24 E-value=0.44 Score=42.28 Aligned_cols=48 Identities=19% Similarity=-0.011 Sum_probs=38.9
Q ss_pred ceeeecCceeeEEEEeCCeE--EEEeCCceeeccCEEEEcCCHHH-HHHhh
Q 043717 47 MVSIVRPCWISNLEPFNGMW--HLRENVKPRGQFDVVVIAHNGKC-ANWLL 94 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w--~l~~~~g~~~~aD~VVlA~Pa~~-A~~LL 94 (246)
.++|+++++|++|...+++| .|.+++|..+.+|.||.|+-... .++++
T Consensus 122 gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 122 TVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp TEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHT
T ss_pred CcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHHh
Confidence 57999999999999988889 88887776789999999987543 33444
No 69
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=88.18 E-value=0.67 Score=41.14 Aligned_cols=99 Identities=17% Similarity=0.020 Sum_probs=66.3
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|...++++.+.+.+|..+++|.||+|+.... .. ++ +
T Consensus 202 v~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p------~~-------------------~l----~---- 248 (384)
T 2v3a_A 202 VRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRP------RT-------------------EL----A---- 248 (384)
T ss_dssp CEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE------CC-------------------HH----H----
T ss_pred CEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCc------CH-------------------HH----H----
Confidence 789999999999988888888877776789999999976411 10 11 1
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCC--CC---CHHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLL--GS---SVESAALSGMALANHIAD 197 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~--G~---~ie~Av~SG~~aA~~l~~ 197 (246)
+-+|+.. . .-+.|.. .+.+..|+||.+||-.. +. .+..|+..|+.+|+.|+.
T Consensus 249 ~~~g~~~----~-~gi~vd~-------------~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 249 FAAGLAV----N-RGIVVDR-------------SLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAG 305 (384)
T ss_dssp HHTTCCB----S-SSEEECT-------------TCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTT
T ss_pred HHCCCCC----C-CCEEECC-------------CCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcC
Confidence 1234321 0 0122211 12245689999999874 32 477789999999988874
No 70
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=88.16 E-value=0.45 Score=42.37 Aligned_cols=42 Identities=26% Similarity=0.396 Sum_probs=36.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|+..+++|.|++.+|.++.+|.||.|.-...
T Consensus 141 ~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 141 DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTC
T ss_pred CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcch
Confidence 479999999999998889999887776789999999987643
No 71
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=87.38 E-value=0.67 Score=42.01 Aligned_cols=42 Identities=10% Similarity=-0.032 Sum_probs=34.4
Q ss_pred cceeeecCceeeEEEEeCCeEEEEeC---Cce--eeccCEEEEcCCH
Q 043717 46 SMVSIVRPCWISNLEPFNGMWHLREN---VKP--RGQFDVVVIAHNG 87 (246)
Q Consensus 46 ~m~~I~l~t~V~~I~~~~~~w~l~~~---~g~--~~~aD~VVlA~Pa 87 (246)
..++|+++++|++|+..+++|.|... +|. ++++|.||+|+-.
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGY 375 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCE
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCC
Confidence 35789999999999999999988763 443 4789999999863
No 72
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.01 E-value=0.62 Score=44.07 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=33.7
Q ss_pred eeecCceeeEEEEeCC--eEEEEeCCceeeccCEEEEcCC
Q 043717 49 SIVRPCWISNLEPFNG--MWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 49 ~I~l~t~V~~I~~~~~--~w~l~~~~g~~~~aD~VVlA~P 86 (246)
+|+++++|+++...++ .|.|.+++|.++.||.||+|+-
T Consensus 117 ~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG 156 (549)
T 4ap3_A 117 DIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAG 156 (549)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCC
T ss_pred cEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 7899999999998765 8999987777789999999987
No 73
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=86.99 E-value=0.83 Score=41.58 Aligned_cols=103 Identities=14% Similarity=0.045 Sum_probs=67.6
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|...++++.+.++++..+++|.||+|+.......+|. .
T Consensus 223 v~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~-------------------~------------ 271 (455)
T 2yqu_A 223 LTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLS-------------------L------------ 271 (455)
T ss_dssp CEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCC-------------------G------------
T ss_pred CEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCC-------------------h------------
Confidence 799999999999988888888776666789999999987422111110 0
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+.+|+.. ..--++.+. ..+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 272 ~~~g~~~---~~~g~i~vd-------------~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 272 ENAGLST---DERGRIPVD-------------EHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp GGGTCCC---CTTSCCCCC-------------TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred hhcCCcc---CCCCcEeEC-------------CCcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcC
Confidence 0012210 000011111 11224468999999998776 577799999999999985
No 74
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=86.92 E-value=0.6 Score=44.05 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=34.1
Q ss_pred eeecCceeeEEEEeCC--eEEEEeCCceeeccCEEEEcCCH
Q 043717 49 SIVRPCWISNLEPFNG--MWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 49 ~I~l~t~V~~I~~~~~--~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
+|+++++|+++...++ .|.|.+++|..+.||.||+|+-.
T Consensus 105 ~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 105 HFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp GEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred eeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 7899999999998765 89999877767899999999874
No 75
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=86.92 E-value=0.72 Score=42.44 Aligned_cols=103 Identities=11% Similarity=-0.002 Sum_probs=68.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|...++++.|.+.+|..+.+|.||+|+... +.. ..+..
T Consensus 247 v~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~------p~~-------------~~l~l------------ 295 (484)
T 3o0h_A 247 ISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV------PNT-------------TGLGL------------ 295 (484)
T ss_dssp CEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE------ECC-------------TTCCH------------
T ss_pred CEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC------cCC-------------CCCCh------------
Confidence 79999999999999888888888777678999999998741 111 00000
Q ss_pred HHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIADY 198 (246)
Q Consensus 128 ~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~~ 198 (246)
+-.|+.. .. -++.+. ..+.+..|+||.+||-..+. ....|+..|+.+|+.|+..
T Consensus 296 ~~~g~~~----~~~G~i~vd-------------~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 296 ERAGVKV----NEFGAVVVD-------------EKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp HHHTCCB----CTTSCBCCC-------------TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC-
T ss_pred hhcCceE----CCCCCEeEC-------------CCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcCC
Confidence 0123211 00 011111 11235668999999988755 6779999999999998853
No 76
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.55 E-value=0.84 Score=38.07 Aligned_cols=39 Identities=15% Similarity=0.014 Sum_probs=33.6
Q ss_pred CCCCCEEEEcCCCC-CCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 164 DPHGRAGICGNWLL-GSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 164 ~~~~gL~laGDw~~-G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
+..|+||.|||-.. ...+..|+.+|..+|..|...+...
T Consensus 255 t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 255 TTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp CSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 45689999999887 4599999999999999999887654
No 77
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=85.77 E-value=0.86 Score=42.11 Aligned_cols=102 Identities=11% Similarity=-0.048 Sum_probs=66.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|...++++.+...++..+++|.||+|+.......+|. ..
T Consensus 238 V~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~~l~-----------------l~------------- 287 (499)
T 1xdi_A 238 VRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTSGLG-----------------LE------------- 287 (499)
T ss_dssp CEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCSSSC-----------------TT-------------
T ss_pred CEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCCcCC-----------------ch-------------
Confidence 789999999999987777888776666789999999987421111210 00
Q ss_pred HHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 128 ~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
-+|+.. .. -++.|- ..+.+..|+||.+||-..+. ....|+..|+.+|+.|..
T Consensus 288 -~~gl~~----~~~G~i~Vd-------------~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 341 (499)
T 1xdi_A 288 -RVGIQL----GRGNYLTVD-------------RVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALG 341 (499)
T ss_dssp -TTTCCC----BTTTBCCCC-------------SSSBCSSTTEEECSGGGTSCSCHHHHHHHHHHHHHHHTT
T ss_pred -hcCceE----CCCCCEEEC-------------CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 011110 00 001111 11234568999999998776 567899999999998874
No 78
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.71 E-value=0.64 Score=39.82 Aligned_cols=44 Identities=18% Similarity=0.049 Sum_probs=33.4
Q ss_pred CCCCCEEEEcCCCCC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 043717 164 DPHGRAGICGNWLLG--SSVESAALSGMALANHIADYLGSGGVRPE 207 (246)
Q Consensus 164 ~~~~gL~laGDw~~G--~~ie~Av~SG~~aA~~l~~~l~~~~~~~~ 207 (246)
+..|+||.|||-... ..+..|+.+|..+|..|...+...+..|+
T Consensus 285 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~~~~~ 330 (333)
T 1vdc_A 285 TSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQEIGSQEG 330 (333)
T ss_dssp CSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred cCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHHHHHhcccccc
Confidence 457899999999876 48999999999999999988754433333
No 79
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=85.66 E-value=0.86 Score=39.68 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=34.1
Q ss_pred eeeecCceeeEEEEeCC-eEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNG-MWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~-~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++++++++|+.|...++ .|.|.+.++..+.||.||+|+-.
T Consensus 89 ~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 89 PDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGL 129 (360)
T ss_dssp CEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTT
T ss_pred CEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCC
Confidence 68899999999998765 79998876767899999999865
No 80
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=85.44 E-value=0.97 Score=41.33 Aligned_cols=101 Identities=17% Similarity=0.064 Sum_probs=65.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|...++++.+.+.+|..+++|.||+|+... +.. ++ ++
T Consensus 217 V~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~------p~~-------------------~l----~~--- 264 (472)
T 3iwa_A 217 VVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVS------PNT-------------------QL----AR--- 264 (472)
T ss_dssp CEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEE------ECC-------------------HH----HH---
T ss_pred CEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCC------cCH-------------------HH----HH---
Confidence 79999999999998777777777666678999999998741 110 11 11
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCC------C-----CCHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLL------G-----SSVESAALSGMALANHIA 196 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~------G-----~~ie~Av~SG~~aA~~l~ 196 (246)
-+|+.. ..--++.+-. .+.+..|+||.+||-.. | .....|+..|..+|+.|+
T Consensus 265 -~~gl~~---~~~g~i~vd~-------------~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 265 -DAGLEL---DPRGAIIVDT-------------RMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp -HHTCCB---CTTCCEECCT-------------TCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred -hCCccC---CCCCCEEECC-------------CcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 133321 0001122211 12245689999999872 2 256789999999999887
Q ss_pred H
Q 043717 197 D 197 (246)
Q Consensus 197 ~ 197 (246)
.
T Consensus 328 g 328 (472)
T 3iwa_A 328 D 328 (472)
T ss_dssp T
T ss_pred C
Confidence 4
No 81
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=85.28 E-value=0.86 Score=42.72 Aligned_cols=40 Identities=13% Similarity=0.110 Sum_probs=33.8
Q ss_pred eeeecCceeeEEEEeC--CeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFN--GMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~--~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.+|+++++|+++...+ +.|.|.+++|.++.||.||+|+-.
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~ 152 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQ 152 (542)
T ss_dssp GGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred ceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCC
Confidence 4789999999999875 479998877767899999999874
No 82
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=84.71 E-value=1.3 Score=37.46 Aligned_cols=39 Identities=21% Similarity=0.077 Sum_probs=32.3
Q ss_pred cCCCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHhcC
Q 043717 163 FDPHGRAGICGNWLLGS--SVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 163 ~~~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
.+..|+||.|||-..++ .+--|+.+|..||..+.+.|.+
T Consensus 273 ~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 273 KTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp BCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 35679999999988766 5777999999999988887754
No 83
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=84.53 E-value=0.86 Score=38.46 Aligned_cols=40 Identities=15% Similarity=0.159 Sum_probs=32.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
+++++ ++|.+|...++.|.+.++++..+.||.||+|+-..
T Consensus 85 v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 85 VPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp CCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred CEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 67888 89999999888899988776678999999998643
No 84
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=84.38 E-value=1.2 Score=40.42 Aligned_cols=39 Identities=15% Similarity=-0.059 Sum_probs=33.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|...++++.|.++++ .+++|.||+|+.-
T Consensus 204 V~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~ 242 (452)
T 3oc4_A 204 VIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNL 242 (452)
T ss_dssp EEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCC
T ss_pred CEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCC
Confidence 79999999999998777777777766 7899999999874
No 85
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=84.19 E-value=1 Score=41.37 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=31.2
Q ss_pred eecCceeeEEEEeCC--eEEEEeCC---c--eeeccCEEEEcCCH
Q 043717 50 IVRPCWISNLEPFNG--MWHLRENV---K--PRGQFDVVVIAHNG 87 (246)
Q Consensus 50 I~l~t~V~~I~~~~~--~w~l~~~~---g--~~~~aD~VVlA~Pa 87 (246)
|+++++|+.|.+.++ +|.|...+ | ..+.||.||+|+-.
T Consensus 120 i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~ 164 (464)
T 2xve_A 120 IRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGH 164 (464)
T ss_dssp EECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCS
T ss_pred EEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 899999999998766 89887632 3 46789999999984
No 86
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=84.17 E-value=1.4 Score=39.54 Aligned_cols=39 Identities=13% Similarity=0.036 Sum_probs=33.0
Q ss_pred eeeecCceeeEEEEeCCeE-EEEeCCceeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFNGMW-HLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w-~l~~~~g~~~~aD~VVlA~P 86 (246)
++|+++++|.+|...+++. .|.+.+|..+++|.||+|+.
T Consensus 209 V~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G 248 (415)
T 3lxd_A 209 VDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIG 248 (415)
T ss_dssp CEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSC
T ss_pred CEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCC
Confidence 7999999999999876665 57777777889999999987
No 87
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=84.15 E-value=1.4 Score=40.25 Aligned_cols=103 Identities=17% Similarity=0.002 Sum_probs=67.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCce-eeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKP-RGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGV 126 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~-~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL 126 (246)
++|+++++|.+|...++++.|.+++|. .+++|.||+|+... +.. ..+..+
T Consensus 222 v~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~------p~~-------------~~l~~~---------- 272 (463)
T 2r9z_A 222 IETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA------PNT-------------RDLGLE---------- 272 (463)
T ss_dssp CEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE------ESC-------------TTSCHH----------
T ss_pred CEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC------cCC-------------CCCCch----------
Confidence 789999999999988777888877776 78999999998631 111 001101
Q ss_pred HHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 127 EAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 127 ~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
-+|+.. ..--++.|- ..+.+..|+||.+||-..+. ....|+.+|+.+|+.|..
T Consensus 273 --~~g~~~---~~~G~i~vd-------------~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 273 --AAGIEV---QSNGMVPTD-------------AYQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp --HHTCCC---CTTSCCCCC-------------TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHS
T ss_pred --hcCCcc---CCCCCEeEC-------------CCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcC
Confidence 113211 000011111 11234568999999998655 778899999999998874
No 88
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=84.10 E-value=0.86 Score=41.65 Aligned_cols=32 Identities=9% Similarity=0.000 Sum_probs=29.8
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Q 043717 165 PHGRAGICGNWLLGSSVESAALSGMALANHIA 196 (246)
Q Consensus 165 ~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~ 196 (246)
...+|++||||..+..+|+|+.+++.++++|.
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 407 SKDNIYLSRSYDASSHFESMTDDVKDIYFRVT 438 (453)
T ss_dssp TTTSEEECCCCCSCSBSHHHHHHHHHHHHHHH
T ss_pred CCCCEEECCCCCccccHHHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999998
No 89
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=84.01 E-value=1.4 Score=36.76 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=32.3
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
+++. +++|+.|.+.+++|.|.++++..+.||.||+|+-.
T Consensus 72 v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~ 110 (297)
T 3fbs_A 72 IHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGV 110 (297)
T ss_dssp EEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCC
T ss_pred eEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCC
Confidence 4554 45899999998999998877767899999999865
No 90
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=84.00 E-value=1.4 Score=40.69 Aligned_cols=40 Identities=13% Similarity=0.098 Sum_probs=34.3
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|...+++..|.+.+|..+++|.||+|+..
T Consensus 241 V~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 241 VKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGL 280 (493)
T ss_dssp CEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCE
T ss_pred CEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCC
Confidence 7999999999998877777777777777899999999864
No 91
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=83.89 E-value=0.97 Score=40.55 Aligned_cols=39 Identities=10% Similarity=0.342 Sum_probs=31.4
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++++++|++|.+.++. |.++++..+.||.|||||-+
T Consensus 76 ~i~~~~~~~V~~id~~~~~--v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNKL--VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TCEEECSCCEEEEETTTTE--EEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCCE--EEECCCCEEECCEEEEecCC
Confidence 4789999999999887654 44566667899999999864
No 92
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=83.87 E-value=1.3 Score=37.37 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=32.6
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
+++++ ++|..|...+++|.|...++..+.||.||+|+-.
T Consensus 74 v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 74 LKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp CEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred CEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCC
Confidence 67777 7899999988889987766667899999999864
No 93
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=83.85 E-value=1.1 Score=40.33 Aligned_cols=99 Identities=11% Similarity=-0.036 Sum_probs=65.0
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|...++...|.+.+|..+++|.||+|+.... .. ++ .
T Consensus 200 V~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p------~~-------------------~l--------~ 246 (410)
T 3ef6_A 200 VQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEP------AD-------------------QL--------A 246 (410)
T ss_dssp CEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEE------CC-------------------HH--------H
T ss_pred CEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCee------cH-------------------HH--------H
Confidence 799999999999886655577777777889999999987421 10 11 1
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC----------CHHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS----------SVESAALSGMALANHIAD 197 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~----------~ie~Av~SG~~aA~~l~~ 197 (246)
+-+|+.. . ..+.+- ..+.+..|+||.+||-.... .+..|+.+|..+|+.|+.
T Consensus 247 ~~~gl~~----~-~gi~vd-------------~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 247 RQAGLAC----D-RGVIVD-------------HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp HHTTCCB----S-SSEECC-------------TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred HhCCCcc----C-CeEEEc-------------cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcC
Confidence 1223321 0 111111 11234568999999976532 368999999999998875
No 94
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=83.81 E-value=1.1 Score=37.85 Aligned_cols=37 Identities=16% Similarity=0.008 Sum_probs=31.9
Q ss_pred CCCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHhc
Q 043717 164 DPHGRAGICGNWLLGS--SVESAALSGMALANHIADYLG 200 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+..|+||.+||-.... .+..|+.+|..+|..|...+.
T Consensus 267 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 267 TNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp CSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHH
Confidence 4568999999998765 789999999999999988763
No 95
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=83.56 E-value=0.94 Score=42.74 Aligned_cols=38 Identities=5% Similarity=0.068 Sum_probs=33.3
Q ss_pred eeecCceeeEEEEeC--CeEEEEeCCceeeccCEEEEcCC
Q 043717 49 SIVRPCWISNLEPFN--GMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 49 ~I~l~t~V~~I~~~~--~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
.|+++++|+++...+ +.|.|.+++|..+.||.||+|+-
T Consensus 105 ~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG 144 (545)
T 3uox_A 105 HYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATG 144 (545)
T ss_dssp GEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCC
T ss_pred cEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 689999999998764 58999987777889999999987
No 96
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=83.53 E-value=1.8 Score=38.70 Aligned_cols=99 Identities=14% Similarity=0.083 Sum_probs=65.4
Q ss_pred eeeecCceeeEEEEeCCeE-EEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMW-HLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGV 126 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w-~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL 126 (246)
++|+++++|.+|...+++. .|.+.+|..+++|.||+|+... +.. ++ +
T Consensus 199 V~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~------p~~-------------------~l----~--- 246 (404)
T 3fg2_P 199 IRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVI------PNV-------------------EI----A--- 246 (404)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEE------ECC-------------------HH----H---
T ss_pred cEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCc------cCH-------------------HH----H---
Confidence 7999999999999877665 4777777788999999998741 110 11 1
Q ss_pred HHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-----------CHHHHHHHHHHHHHHH
Q 043717 127 EAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-----------SVESAALSGMALANHI 195 (246)
Q Consensus 127 ~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-----------~ie~Av~SG~~aA~~l 195 (246)
+-+|+.. . .-+.+- ..+.+..|+||.+||-.... .+..|+..|..+|+.|
T Consensus 247 -~~~gl~~----~-~Gi~vd-------------~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i 307 (404)
T 3fg2_P 247 -AAAGLPT----A-AGIIVD-------------QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARL 307 (404)
T ss_dssp -HHTTCCB----S-SSEEEC-------------TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHT
T ss_pred -HhCCCCC----C-CCEEEC-------------CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHh
Confidence 1233321 0 111111 11224568999999976543 3789999999999988
Q ss_pred HH
Q 043717 196 AD 197 (246)
Q Consensus 196 ~~ 197 (246)
+.
T Consensus 308 ~g 309 (404)
T 3fg2_P 308 TG 309 (404)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 97
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=83.42 E-value=1.3 Score=41.33 Aligned_cols=102 Identities=15% Similarity=0.058 Sum_probs=66.7
Q ss_pred eeeecCceeeEEEEeCCe----EEEEeCCce-eeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGM----WHLRENVKP-RGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGM 122 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~----w~l~~~~g~-~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~l 122 (246)
++|+++++|.+|...+++ +.|.+++|. .+++|.||+|+... +.. +. +
T Consensus 270 V~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~------p~~-------------------~~---~ 321 (523)
T 1mo9_A 270 MEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ------PRS-------------------AE---L 321 (523)
T ss_dssp CEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE------ECC-------------------HH---H
T ss_pred cEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc------cCC-------------------cc---C
Confidence 799999999999986555 778777775 78999999997631 110 00 1
Q ss_pred HHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 123 LEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 123 l~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
++ -+|+.. ..--++.|- ..+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 322 l~----~~gl~~---~~~G~i~Vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 322 AK----ILGLDL---GPKGEVLVN-------------EYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp HH----HHTCCB---CTTSCBCCC-------------TTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHTT
T ss_pred HH----HcCCcc---CCCCCEEEC-------------CCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHHcC
Confidence 11 123311 000011111 11234568999999998764 788899999999999875
No 98
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=83.21 E-value=1.2 Score=39.21 Aligned_cols=143 Identities=13% Similarity=0.107 Sum_probs=81.0
Q ss_pred eeeecCceeeEEEEeCCe-EEEEeCCceeeccCEEEEcCCHHH--HHHhhccC-Ch-----------H--H-HHHH----
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRENVKPRGQFDVVVIAHNGKC--ANWLLGSS-GL-----------P--Q-IARQ---- 105 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~~~g~~~~aD~VVlA~Pa~~--A~~LL~~~-~~-----------~--~-la~~---- 105 (246)
++|+++++|++|...+++ |.|.++++ .+.+|.||+|+-+.. ..+.+... .. + . +...
T Consensus 189 ~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (405)
T 2gag_B 189 VDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFELPIQSHPLQALVSELFEPVHPTVVMSN 267 (405)
T ss_dssp CEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCCCEEEEEEEEEEEEEBCSCCCSEEEET
T ss_pred CEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCCCccccceeEEEecCCccccCceEEeC
Confidence 689999999999987665 67877666 678999999998643 33332110 00 0 0 0000
Q ss_pred -----hh------------hh-C--C-CCCHHHHHHHHHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccC
Q 043717 106 -----MK------------EN-I--P-TATAEKVKKGMLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFD 164 (246)
Q Consensus 106 -----L~------------~~-~--~-~~~~eel~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~ 164 (246)
+. .. . . ...+++..+.+++.+.++++.- ... -.+..|..-.|..+-+.+.+-.
T Consensus 268 ~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l----~~~--~~~~~w~g~~~~t~d~~p~ig~ 341 (405)
T 2gag_B 268 HIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAAAVELFPIF----ARA--HVLRTWGGIVDTTMDASPIISK 341 (405)
T ss_dssp TTTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHHHHHHCGGG----GGC--EECEEEEEEEEEETTSCCEEEE
T ss_pred CCcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHHHHHhCCcc----ccC--CcceEEeeccccCCCCCCEecc
Confidence 00 00 0 0 1223455678888888887521 111 1234454333322222222211
Q ss_pred C-CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 043717 165 P-HGRAGICGNWLLGSSVESAALSGMALANHIADY 198 (246)
Q Consensus 165 ~-~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~ 198 (246)
. .++++++.- +.|.++-.|...|+.+|+.|...
T Consensus 342 ~~~~~l~~~~G-~~g~G~~~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 342 TPIQNLYVNCG-WGTGGFKGTPGAGFTLAHTIAND 375 (405)
T ss_dssp CSSBTEEEEEC-CGGGCSTTHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEec-CCCchhhHHHHHHHHHHHHHhCC
Confidence 1 568887643 33558888999999999988753
No 99
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=83.09 E-value=1.6 Score=37.02 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=30.6
Q ss_pred cCCCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHh
Q 043717 163 FDPHGRAGICGNWLLGS--SVESAALSGMALANHIADYL 199 (246)
Q Consensus 163 ~~~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l 199 (246)
.+..|+||.|||-...+ .+..|+.+|+.||..|...+
T Consensus 267 ~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 267 TTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp BCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999987643 68899999999999887665
No 100
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=82.71 E-value=1.1 Score=40.29 Aligned_cols=41 Identities=10% Similarity=-0.116 Sum_probs=33.4
Q ss_pred eeeecCceeeEEEE---------------eCCe-EEEEeCCceee--ccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEP---------------FNGM-WHLRENVKPRG--QFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~---------------~~~~-w~l~~~~g~~~--~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|.. .+++ |.|.+++| .+ .+|.||+|+-+..
T Consensus 196 v~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 196 VEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp CEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred CEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 78999999999987 4555 56777666 67 8999999998763
No 101
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.24 E-value=0.9 Score=41.17 Aligned_cols=39 Identities=8% Similarity=-0.015 Sum_probs=30.2
Q ss_pred eeeecCceeeEEEEe---CCeE--EEEeCCce----eeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPF---NGMW--HLRENVKP----RGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~---~~~w--~l~~~~g~----~~~aD~VVlA~P 86 (246)
++|+++++|++|.+. ++.| .|.+.++. .+.||.||+|+-
T Consensus 142 ~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG 189 (463)
T 3s5w_A 142 EQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPG 189 (463)
T ss_dssp TTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCC
T ss_pred CeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCC
Confidence 689999999999987 5556 55553332 678999999975
No 102
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=82.16 E-value=1.4 Score=41.78 Aligned_cols=42 Identities=14% Similarity=-0.009 Sum_probs=35.1
Q ss_pred eeeecCceeeEEEEeCCe-EEEEeCCceeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|...+++ +.|.++++..+.+|.||+|+-...
T Consensus 235 v~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 235 GEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp CEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred CEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 799999999999987765 457777776789999999987654
No 103
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=81.76 E-value=2 Score=36.19 Aligned_cols=41 Identities=15% Similarity=0.202 Sum_probs=33.3
Q ss_pred ceeeecCceeeEEEEeC---CeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFN---GMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~---~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++++++|+.|.+.. +.|.|.++++..+.||.||+|+-.
T Consensus 70 ~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~ 113 (310)
T 1fl2_A 70 DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGA 113 (310)
T ss_dssp CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCE
T ss_pred CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCC
Confidence 47899999999998653 379998876667899999999764
No 104
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=80.37 E-value=2 Score=39.11 Aligned_cols=103 Identities=11% Similarity=-0.010 Sum_probs=66.0
Q ss_pred eeeecCceeeEEEEeCCe-EEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGV 126 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL 126 (246)
++|+++++|.+|...+++ +.+.+++|..+++|.||+|+... +.. ..+..
T Consensus 223 v~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~------p~~-------------~~l~~----------- 272 (450)
T 1ges_A 223 PQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE------PAN-------------DNINL----------- 272 (450)
T ss_dssp CEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE------ESC-------------TTSCH-----------
T ss_pred CEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC------cCC-------------CCCCc-----------
Confidence 789999999999887544 77777666678999999998631 111 00000
Q ss_pred HHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 127 EAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 127 ~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+-+|+.. .+--++.|- ..+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 273 -~~~gl~~---~~~g~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 273 -EAAGVKT---NEKGYIVVD-------------KYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp -HHHTCCB---CTTSCBCCC-------------TTSBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHHHT
T ss_pred -hhcCceE---CCCCCEeEC-------------CCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 0123211 000011111 11234568999999988654 788999999999999875
No 105
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=80.17 E-value=1.1 Score=41.43 Aligned_cols=38 Identities=21% Similarity=0.148 Sum_probs=33.0
Q ss_pred CCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHHHhcC
Q 043717 164 DPHGRAGICGNWLLGS-SVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
+..++||.+||-..|. .+-.|+.+|+.+|..|...+..
T Consensus 407 Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 407 TNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp CSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 5568999999998876 7999999999999999887743
No 106
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=80.04 E-value=2.2 Score=39.40 Aligned_cols=102 Identities=13% Similarity=0.023 Sum_probs=66.2
Q ss_pred eeeecCceeeEEEEeCC-eEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNG-MWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGV 126 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~-~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL 126 (246)
++|+++++|.+|...++ .+.|.+++|..+++|.||+|+........| . +
T Consensus 246 V~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L-------------------~--------l--- 295 (490)
T 1fec_A 246 INVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTL-------------------Q--------L--- 295 (490)
T ss_dssp EEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTS-------------------C--------G---
T ss_pred CEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCcccc-------------------C--------c---
Confidence 79999999999988754 477777666678999999998632110000 0 0
Q ss_pred HHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 127 EAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 127 ~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+-+|+.. .. -++.|- ..+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 296 -~~~gl~~----~~~G~I~Vd-------------~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 296 -EKAGVEV----AKNGAIKVD-------------AYSKTNVDNIYAIGDVTDRVMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp -GGGTCCB----CTTSCBCCC-------------TTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred -hhcCccC----CCCCCEEEC-------------CCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcC
Confidence 0112210 00 011111 11234568999999998754 788999999999999875
No 107
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=79.98 E-value=2 Score=37.50 Aligned_cols=41 Identities=12% Similarity=-0.073 Sum_probs=33.6
Q ss_pred eeeecCceeeEEEEeCCeEE-EEe---CCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWH-LRE---NVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~-l~~---~~g~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|...++++. |.+ +++..+.+|.||.|+-..
T Consensus 117 v~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~ 161 (397)
T 3cgv_A 117 ADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp CEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred CEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcc
Confidence 68999999999999988886 665 344678999999998743
No 108
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=79.94 E-value=1.5 Score=40.95 Aligned_cols=39 Identities=5% Similarity=-0.067 Sum_probs=31.4
Q ss_pred eeeecCceeeEEEE-eCCe-EEEEeCCceeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEP-FNGM-WHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~-~~~~-w~l~~~~g~~~~aD~VVlA~P 86 (246)
++|+++++|++|.. .+++ +.|.+++|..+.||.||+++.
T Consensus 271 g~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~ 311 (475)
T 3p1w_A 271 GTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPS 311 (475)
T ss_dssp -CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGG
T ss_pred CEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCC
Confidence 68999999999998 4444 567777776789999999983
No 109
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=79.86 E-value=2.8 Score=35.55 Aligned_cols=37 Identities=16% Similarity=0.013 Sum_probs=32.2
Q ss_pred CCCCCEEEEcCCCCC--CCHHHHHHHHHHHHHHHHHHhc
Q 043717 164 DPHGRAGICGNWLLG--SSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 164 ~~~~gL~laGDw~~G--~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+..|+||.+||-..+ ..+..|+.+|..+|..|...+.
T Consensus 278 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 278 TSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp CSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhh
Confidence 457899999999876 4899999999999999988774
No 110
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=78.82 E-value=2.5 Score=38.72 Aligned_cols=100 Identities=11% Similarity=-0.005 Sum_probs=65.1
Q ss_pred eeeecCceeeEEEEeCCe--EEEEeCCc-eeeccCEEEEcCCHHHHHHh-hccCChHHHHHHhhhhCCCCCHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGM--WHLRENVK-PRGQFDVVVIAHNGKCANWL-LGSSGLPQIARQMKENIPTATAEKVKKGML 123 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~--w~l~~~~g-~~~~aD~VVlA~Pa~~A~~L-L~~~~~~~la~~L~~~~~~~~~eel~~~ll 123 (246)
++|+++++|.+|...+++ ..|.+++| ..+++|.||+|+.......| ++.
T Consensus 241 v~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~l~l~~--------------------------- 293 (479)
T 2hqm_A 241 INVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHLGMGSEN--------------------------- 293 (479)
T ss_dssp CEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECCCSSGGG---------------------------
T ss_pred eEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCccccChhh---------------------------
Confidence 789999999999886555 67777666 67899999999873110011 111
Q ss_pred HHHHHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 124 EGVEAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 124 ~eL~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+|+.. .. -++.|- ..+.+..|+||.+||-..+. ....|+..|+.+|+.|+.
T Consensus 294 ------~gl~~----~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 294 ------VGIKL----NSHDQIIAD-------------EYQNTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp ------GTCCB----CTTSCBCCC-------------TTCBCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHS
T ss_pred ------cCceE----CCCCCEeEC-------------CCCccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcC
Confidence 12210 00 011111 11234568999999997654 788999999999999874
No 111
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=78.50 E-value=3.7 Score=31.80 Aligned_cols=15 Identities=7% Similarity=0.151 Sum_probs=8.8
Q ss_pred CHHHHHHHHHHHHHH
Q 043717 114 TAEKVKKGMLEGVEA 128 (246)
Q Consensus 114 ~~eel~~~ll~eL~~ 128 (246)
..+++.+.+.+.+++
T Consensus 54 ~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 54 SGEELLRRLEAHARR 68 (180)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 355666666666554
No 112
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=78.47 E-value=2.8 Score=38.08 Aligned_cols=101 Identities=15% Similarity=0.101 Sum_probs=66.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|...++.+.+.++++ .+++|.||+|+.......++. +
T Consensus 231 v~i~~~~~v~~i~~~~~~~~v~~~~~-~i~aD~Vv~a~G~~p~~~~l~---------------------------l---- 278 (467)
T 1zk7_A 231 IEVLEHTQASQVAHMDGEFVLTTTHG-ELRADKLLVATGRTPNTRSLA---------------------------L---- 278 (467)
T ss_dssp CEEETTCCEEEEEEETTEEEEEETTE-EEEESEEEECSCEEESCTTSC---------------------------G----
T ss_pred CEEEcCCEEEEEEEeCCEEEEEECCc-EEEcCEEEECCCCCcCCCcCC---------------------------c----
Confidence 78999999999998888888877654 679999999987521111100 0
Q ss_pred HHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 128 ~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+.+|+.. .. -++.|. ..+.+..|+||.+||-..+. ....|+.+|..+|..|+.
T Consensus 279 ~~~gl~~----~~~G~i~vd-------------~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 279 DAAGVTV----NAQGAIVID-------------QGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp GGGTCCB----CTTSCBCCC-------------TTCBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHHHTT
T ss_pred hhcCCcC----CCCCCEEEC-------------CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 0012210 00 001110 11234568999999998766 688899999999998864
No 113
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=78.47 E-value=2.4 Score=39.15 Aligned_cols=102 Identities=16% Similarity=0.012 Sum_probs=65.7
Q ss_pred eeeecCceeeEEEEeCC-eEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNG-MWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGV 126 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~-~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL 126 (246)
++|+++++|.+|...++ .+.|.+.+|..+++|.||+|+........|. +
T Consensus 250 V~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~---------------------------l--- 299 (495)
T 2wpf_A 250 IEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQ---------------------------L--- 299 (495)
T ss_dssp CEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGT---------------------------G---
T ss_pred CEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccc---------------------------h---
Confidence 79999999999988754 4777776666789999999986311101000 0
Q ss_pred HHHhCCCCCCCCCCc-eeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 127 EAALGRPKGSLQKPI-YTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 127 ~~llg~~~~~~~~p~-~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+-+|+.. ... ++.|- ..+.+..|+||.+||-..+. ....|+..|..+|+.|+.
T Consensus 300 -~~~gl~~----~~~G~i~Vd-------------~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 300 -GNVGVKL----TPKGGVQVD-------------EFSRTNVPNIYAIGDITDRLMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp -GGTTCCB----CTTSSBCCC-------------TTCBCSSTTEEECGGGGCSCCCHHHHHHHHHHHHHHHHS
T ss_pred -hhcCccC----CCCCCEEEC-------------CCCccCCCCEEEEeccCCCccCHHHHHHHHHHHHHHhcC
Confidence 0112210 000 11111 11224568999999998755 788999999999999874
No 114
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=77.60 E-value=2.6 Score=38.40 Aligned_cols=102 Identities=13% Similarity=-0.042 Sum_probs=65.9
Q ss_pred eeeecCceeeEEEEeCCe-EEEE-eCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLR-ENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEG 125 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~-~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~e 125 (246)
++|+++++|.+|...+++ +.|. +++|. +.+|.||+|+.......+|. .
T Consensus 226 v~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~l~-----------------l------------ 275 (463)
T 4dna_A 226 IRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNGLG-----------------L------------ 275 (463)
T ss_dssp CEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTTSS-----------------T------------
T ss_pred CEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCCCC-----------------c------------
Confidence 799999999999987655 6787 77776 89999999987421111110 0
Q ss_pred HHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 126 VEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 126 L~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+-+|+.. ... ..+... ..+.+..|+||.+||-..+. ....|+..|+.+|+.|+.
T Consensus 276 --~~~g~~~----~~~--------G~i~vd----~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 330 (463)
T 4dna_A 276 --EAAGVRT----NEL--------GAIIVD----AFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETEYK 330 (463)
T ss_dssp --GGGTCCB----CTT--------SCBCCC----TTCBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHHHS
T ss_pred --cccCceE----CCC--------CCEeEC----cCCCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 0112210 000 001000 11235568999999988765 678899999999999885
No 115
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=77.59 E-value=2.6 Score=38.61 Aligned_cols=102 Identities=15% Similarity=0.066 Sum_probs=65.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCC----ceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENV----KPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGML 123 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~----g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll 123 (246)
++|+++++|.+|...+++..+.+.+ +..+++|.||+|+....-..+|.-
T Consensus 241 V~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~--------------------------- 293 (482)
T 1ojt_A 241 DNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISA--------------------------- 293 (482)
T ss_dssp EEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGGTTG---------------------------
T ss_pred CEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCCCCh---------------------------
Confidence 7999999999999887777776544 556789999999874221122100
Q ss_pred HHHHHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 124 EGVEAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 124 ~eL~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+-+|+.. .. -++.|- ..+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 294 ----~~~gl~~----~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 294 ----EKAGVAV----TDRGFIEVD-------------KQMRTNVPHIYAIGDIVGQPMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp ----GGTTCCC----CTTSCCCCC-------------TTSBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred ----hhcCcee----CCCCCEeeC-------------CCcccCCCCEEEEEcccCCCccHHHHHHHHHHHHHHHcC
Confidence 0012110 00 001111 11234568999999998765 678899999999998874
No 116
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=77.25 E-value=2.9 Score=38.17 Aligned_cols=103 Identities=16% Similarity=0.067 Sum_probs=65.4
Q ss_pred eeeecCceeeEEEEeCCeEEEEeC-C--ce--eeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLREN-V--KP--RGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGM 122 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~-~--g~--~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~l 122 (246)
++|+++++|.+|...++++.+... + |. .+++|.||+|+... +... ....+
T Consensus 225 V~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~------p~~~-------------~l~l~------ 279 (464)
T 2eq6_A 225 IRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRK------PRTE-------------GLGLE------ 279 (464)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEE------ESCT-------------TSSHH------
T ss_pred CEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcc------cCCC-------------CCChh------
Confidence 799999999999988878777653 4 54 67999999998631 1110 00000
Q ss_pred HHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 123 LEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 123 l~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
.+|+.. ..--++.|.. .+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 280 ------~~g~~~---~~~G~i~vd~-------------~~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 280 ------KAGVKV---DERGFIRVNA-------------RMETSVPGVYAIGDAARPPLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp ------HHTCCB---CTTSCBCCCT-------------TCBCSSTTEEECGGGTCSSCCHHHHHHHHHHHHHHHTT
T ss_pred ------hcCcee---cCCCCEEECC-------------CcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 122210 0000111111 1224568999999998765 677899999999998874
No 117
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=76.63 E-value=1.8 Score=36.87 Aligned_cols=38 Identities=13% Similarity=0.114 Sum_probs=31.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
+++++++ |..|...+++|.|.+ ++..+.+|.||+|+-.
T Consensus 85 v~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~ 122 (333)
T 1vdc_A 85 TTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGA 122 (333)
T ss_dssp CEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCE
T ss_pred CEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCC
Confidence 6788887 999998888899887 4557899999999865
No 118
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=76.31 E-value=3.4 Score=37.33 Aligned_cols=99 Identities=14% Similarity=-0.016 Sum_probs=63.9
Q ss_pred eeeecCceeeEEEE--eCCeE-EEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEP--FNGMW-HLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLE 124 (246)
Q Consensus 48 ~~I~l~t~V~~I~~--~~~~w-~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~ 124 (246)
++|+++++|.+|.. .++++ .|.+.+|..+.+|.||+|+.... .. ++ +
T Consensus 206 V~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p------~~-------------------~l----~- 255 (431)
T 1q1r_A 206 VDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP------NC-------------------EL----A- 255 (431)
T ss_dssp CEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEE------CC-------------------HH----H-
T ss_pred eEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc------Cc-------------------ch----h-
Confidence 68999999999987 44454 67776676789999999986411 10 11 1
Q ss_pred HHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-----------CHHHHHHHHHHHHH
Q 043717 125 GVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-----------SVESAALSGMALAN 193 (246)
Q Consensus 125 eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-----------~ie~Av~SG~~aA~ 193 (246)
+-+|+.. . ..+.| . ..+.+..|+||.+||-.... .+..|+..|..+|+
T Consensus 256 ---~~~gl~~----~-~gi~V---------d----~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~ 314 (431)
T 1q1r_A 256 ---SAAGLQV----D-NGIVI---------N----EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAA 314 (431)
T ss_dssp ---HHTTCCB----S-SSEEC---------C----TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHH
T ss_pred ---hccCCCC----C-CCEEE---------C----CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHH
Confidence 1123311 0 01111 1 11234568999999987542 46889999999999
Q ss_pred HHHH
Q 043717 194 HIAD 197 (246)
Q Consensus 194 ~l~~ 197 (246)
.|+.
T Consensus 315 ~i~g 318 (431)
T 1q1r_A 315 ILCG 318 (431)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 8874
No 119
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=76.25 E-value=2.9 Score=38.03 Aligned_cols=102 Identities=10% Similarity=0.024 Sum_probs=64.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeC--Cc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLREN--VK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGML 123 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~--~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll 123 (246)
++|+++++|.+|...++++.+.+. +| ..+++|.||+|+.......+| ..+
T Consensus 231 v~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~l-------------------~l~------- 284 (468)
T 2qae_A 231 MKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGGL-------------------GLD------- 284 (468)
T ss_dssp CEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTTS-------------------CHH-------
T ss_pred cEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCCC-------------------Cch-------
Confidence 689999999999987777776653 44 568999999998641110110 000
Q ss_pred HHHHHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCC-CC-CHHHHHHHHHHHHHHHHH
Q 043717 124 EGVEAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLL-GS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 124 ~eL~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~-G~-~ie~Av~SG~~aA~~l~~ 197 (246)
-+|+.. .. -++.|. ..+.+..|+||.+||-.. +. ....|+..|..+|+.|..
T Consensus 285 -----~~gl~~----~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 285 -----KINVAK----NERGFVKIG-------------DHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp -----HHTCCB----CTTSCBCCC-------------TTSBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTT
T ss_pred -----hcCCcc----CCCCCEeEC-------------CCcccCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcC
Confidence 122210 00 011111 112345689999999887 54 778899999999998875
No 120
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=75.99 E-value=3.3 Score=37.69 Aligned_cols=104 Identities=15% Similarity=0.082 Sum_probs=65.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeC--Cc-eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLREN--VK-PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLE 124 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~--~g-~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~ 124 (246)
++|+++++|.+|...+++..+... ++ ..+++|.||+|+.-......|. ..
T Consensus 236 v~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~-----------------~~---------- 288 (476)
T 3lad_A 236 LKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVTTDLL-----------------AA---------- 288 (476)
T ss_dssp EEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECCTTCC-----------------SS----------
T ss_pred CEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccCCCCC-----------------cc----------
Confidence 799999999999988777776653 23 5678999999987321000000 00
Q ss_pred HHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHHH
Q 043717 125 GVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIADY 198 (246)
Q Consensus 125 eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~~ 198 (246)
-+|+.. .+. ..+... ..+.+..|+||.+||-..++ ....|+..|..+|+.|...
T Consensus 289 ----~~g~~~----~~~--------G~i~vd----~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 289 ----DSGVTL----DER--------GFIYVD----DYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGH 343 (476)
T ss_dssp ----CCSCCB----CTT--------SCBCCC----TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred ----ccCccc----cCC--------CCEeeC----CCcccCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 001110 000 001101 11235668999999998665 7888999999999999853
No 121
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=75.82 E-value=3.4 Score=36.46 Aligned_cols=41 Identities=7% Similarity=-0.049 Sum_probs=33.2
Q ss_pred eeeecCceeeEEEEeCCeEEE--EeCCce--eeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHL--RENVKP--RGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l--~~~~g~--~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|...++++.+ .+.+|. .+.+|.||.|+-..
T Consensus 121 v~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 121 VDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred CEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 789999999999998888654 445664 58999999998754
No 122
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=75.61 E-value=4.2 Score=34.20 Aligned_cols=37 Identities=22% Similarity=0.130 Sum_probs=31.6
Q ss_pred CCCCCEEEEcCCCCC--CCHHHHHHHHHHHHHHHHHHhc
Q 043717 164 DPHGRAGICGNWLLG--SSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 164 ~~~~gL~laGDw~~G--~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+..|+||.+||-..+ ..+..|+.+|..+|..|...+.
T Consensus 271 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 271 TNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp CSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHHh
Confidence 456899999999875 4899999999999999987663
No 123
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=75.58 E-value=3.6 Score=40.54 Aligned_cols=41 Identities=15% Similarity=-0.002 Sum_probs=34.7
Q ss_pred eeeecCceeeEEEEeCCeE-EEEeCCceeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGMW-HLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w-~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|...++++ .|.+++| .+.+|.||+|+-++.
T Consensus 166 v~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 166 VTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred CEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 6899999999999988876 5777766 689999999998764
No 124
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=75.28 E-value=3.2 Score=38.28 Aligned_cols=40 Identities=13% Similarity=0.128 Sum_probs=32.5
Q ss_pred eeeecCceeeEEEEeCC-eEEEEeCCcee-eccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNG-MWHLRENVKPR-GQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~-~w~l~~~~g~~-~~aD~VVlA~Pa 87 (246)
++|+++++|.+|...++ .+.+.+++|.. +++|.||+|+.-
T Consensus 232 v~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~ 273 (500)
T 1onf_A 232 INIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGR 273 (500)
T ss_dssp CEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCB
T ss_pred CEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCC
Confidence 79999999999987653 47777766655 899999999863
No 125
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=75.17 E-value=2.4 Score=38.64 Aligned_cols=40 Identities=8% Similarity=-0.076 Sum_probs=32.9
Q ss_pred eeeecCceeeEEEEe--CCeE-EEEeCCceeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPF--NGMW-HLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~--~~~w-~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|... ++++ .|.++ +..+.+|.||+|+++.
T Consensus 257 ~~i~~~~~V~~i~~~~~~~~~~~V~~~-g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 257 GTYMLDTPIDEVLYKKDTGKFEGVKTK-LGTFKAPLVIADPTYF 299 (453)
T ss_dssp CEEECSCCCCEEEEETTTTEEEEEEET-TEEEECSCEEECGGGC
T ss_pred CEEECCCEEEEEEEECCCCeEEEEEEC-CeEEECCEEEECCCcc
Confidence 689999999999988 6765 46555 4577999999999876
No 126
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=74.94 E-value=2.7 Score=35.62 Aligned_cols=39 Identities=13% Similarity=0.198 Sum_probs=32.3
Q ss_pred eeeecCceeeEEEEeCCeEEEEe---CCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE---NVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~---~~g~~~~aD~VVlA~Pa 87 (246)
+++++++ |..+...++.|.+.+ +++..+.+|.||+|+-.
T Consensus 99 v~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 99 TEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp CEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred CEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 6889998 999999888999876 34557789999999764
No 127
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=74.12 E-value=3.8 Score=37.80 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=34.4
Q ss_pred eeeecCceeeEEEEeCCeEEEEe---CCce--eeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE---NVKP--RGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~---~~g~--~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|...++.|.|.+ .+|. .+.+|.||+|+-++.
T Consensus 164 v~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 164 GEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred CEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 68999999999999888788766 2443 678999999998764
No 128
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=73.97 E-value=3.9 Score=37.98 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=33.0
Q ss_pred eeeecCceeeEEEE-------------------eCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEP-------------------FNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~-------------------~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|.. .++++.+...+|..+++|.||+|+..
T Consensus 207 V~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 207 VDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp CEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred CEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 78999999999987 35667777766667899999999873
No 129
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=73.86 E-value=2.6 Score=35.90 Aligned_cols=40 Identities=8% Similarity=0.084 Sum_probs=31.7
Q ss_pred ccCCCCCEEEEc--CCCC--CCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 162 IFDPHGRAGICG--NWLL--GSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 162 ~~~~~~gL~laG--Dw~~--G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
+.+..|+||.+| |... ...+..|+..|..+|+.|...+..
T Consensus 310 ~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp BBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred cCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 446779999999 4443 238889999999999999998854
No 130
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=73.70 E-value=4.6 Score=36.48 Aligned_cols=39 Identities=10% Similarity=0.010 Sum_probs=31.1
Q ss_pred eeeecCceeeEEEEeCCeEE-EEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWH-LRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~-l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|...++++. +.. ++..+++|.||+|+..
T Consensus 206 v~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~ 245 (452)
T 2cdu_A 206 VNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGF 245 (452)
T ss_dssp CEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCE
T ss_pred CEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCC
Confidence 79999999999987666664 444 4557899999999874
No 131
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=73.59 E-value=3.8 Score=37.10 Aligned_cols=102 Identities=16% Similarity=0.062 Sum_probs=64.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeC---CceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLREN---VKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLE 124 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~---~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~ 124 (246)
++|+++++|.+|...++++.+... ++..+++|.||+|+.......+|. ..
T Consensus 226 v~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~-----------------~~---------- 278 (455)
T 1ebd_A 226 VEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTDELG-----------------LE---------- 278 (455)
T ss_dssp CEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCSSSS-----------------TT----------
T ss_pred CEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccCcCC-----------------hh----------
Confidence 789999999999988777776542 345789999999987421111110 00
Q ss_pred HHHHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 125 GVEAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 125 eL~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
-+|+.. .. -++.|. ..+.+..|+||.+||-..+. ....|+.+|..+|+.|..
T Consensus 279 ----~~g~~~----~~~G~i~vd-------------~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 279 ----QIGIKM----TNRGLIEVD-------------QQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp ----TTTCCB----CTTSCBCCC-------------TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTS
T ss_pred ----hcCCcc----CCCCCEeeC-------------CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 011110 00 011111 11234568999999998765 577899999999998874
No 132
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=73.41 E-value=4 Score=37.15 Aligned_cols=102 Identities=13% Similarity=0.045 Sum_probs=65.0
Q ss_pred eeeecCceeeEEEEeCCe-EEEEe-----CCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRE-----NVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKG 121 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~-----~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ 121 (246)
++|+++++|.+|...+++ +.+.. .++..+++|.||+|+... +... .+.
T Consensus 235 v~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~------p~~~-------------~l~------- 288 (474)
T 1zmd_A 235 FKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR------PFTK-------------NLG------- 288 (474)
T ss_dssp CEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEE------ECCT-------------TSS-------
T ss_pred CEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCC------cCCC-------------cCC-------
Confidence 789999999999987766 77653 344578999999998642 1110 000
Q ss_pred HHHHHHHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 122 MLEGVEAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 122 ll~eL~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
++ -+|+.. .. -++.|. ..+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 289 -l~----~~g~~~----~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 289 -LE----ELGIEL----DPRGRIPVN-------------TRFQTKIPNIYAIGDVVAGPMLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp -HH----HHTCCC----CTTSCCCCC-------------TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred -ch----hcCCcc----CCCCCEEEC-------------cCCccCCCCEEEeeecCCCCccHHHHHHHHHHHHHHhcC
Confidence 00 112211 00 011111 11234568999999988765 678899999999999875
No 133
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=73.26 E-value=3.3 Score=38.57 Aligned_cols=37 Identities=16% Similarity=0.020 Sum_probs=32.0
Q ss_pred CCCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHhc
Q 043717 164 DPHGRAGICGNWLLGS--SVESAALSGMALANHIADYLG 200 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+..|+||.+||-...+ .+..|+.+|..+|..|...+.
T Consensus 478 ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L~ 516 (521)
T 1hyu_A 478 TSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLI 516 (521)
T ss_dssp CSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHHH
Confidence 4568999999998765 799999999999999988764
No 134
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=73.24 E-value=3.4 Score=38.29 Aligned_cols=47 Identities=11% Similarity=-0.069 Sum_probs=36.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc---eeeccCEEEEcCCHHH-HHHhh
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK---PRGQFDVVVIAHNGKC-ANWLL 94 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g---~~~~aD~VVlA~Pa~~-A~~LL 94 (246)
++|+++++|++|+..++++.++..++ .++.+|.||.|.-+.. .++++
T Consensus 121 v~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 171 (500)
T 2qa1_A 121 ADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAA 171 (500)
T ss_dssp CEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHHT
T ss_pred CEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHHc
Confidence 68999999999999999998876433 2678999999987654 33444
No 135
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=73.11 E-value=4.1 Score=34.90 Aligned_cols=37 Identities=22% Similarity=0.111 Sum_probs=31.1
Q ss_pred CCCCCEEEEcCCCCC--CCHHHHHHHHHHHHHHHHHHhc
Q 043717 164 DPHGRAGICGNWLLG--SSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 164 ~~~~gL~laGDw~~G--~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+..|+||.+||-... .....|+.+|..+|..|...+.
T Consensus 278 t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 278 TSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp CSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhh
Confidence 457899999999875 4789999999999998877653
No 136
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=73.03 E-value=2.2 Score=36.27 Aligned_cols=38 Identities=18% Similarity=0.031 Sum_probs=30.8
Q ss_pred cCCCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHhc
Q 043717 163 FDPHGRAGICGNWLLGS--SVESAALSGMALANHIADYLG 200 (246)
Q Consensus 163 ~~~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l~ 200 (246)
.+..|+||.|||-...+ .+--|+.+|..||..|...|.
T Consensus 261 ~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 261 RTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp BCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 35679999999977533 588899999999999887763
No 137
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=72.95 E-value=4.1 Score=37.53 Aligned_cols=104 Identities=11% Similarity=-0.058 Sum_probs=66.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEeC--Cc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLREN--VK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGML 123 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~--~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll 123 (246)
++|+++++|.+|+..+++..+... +| ..+++|.||+|+.-..-..+|. .
T Consensus 229 V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~~l~-------------------l-------- 281 (492)
T 3ic9_A 229 FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVDKLG-------------------L-------- 281 (492)
T ss_dssp SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCSSSC-------------------G--------
T ss_pred cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCCCCC-------------------h--------
Confidence 789999999999988878777652 44 5789999999987421111110 0
Q ss_pred HHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 124 EGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 124 ~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+-+|+.. ... ..... ....+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 282 ----~~~gl~~----~~~---------G~i~v--d~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 282 ----ENTSIEL----DKK---------NSPLF--DELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp ----GGSCCCB----CTT---------CCBCC--CTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred ----hhcCCEE----CCC---------CCEeE--CcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 0012110 000 00000 0012334568999999998776 566999999999999986
No 138
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=72.89 E-value=1.2 Score=39.90 Aligned_cols=42 Identities=10% Similarity=0.045 Sum_probs=29.1
Q ss_pred ceeeecCceee---------EEEEeCCeEEEEeCCceeeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWIS---------NLEPFNGMWHLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~---------~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
.++|+++++|+ +|...+++|.|.++++ .+.+|.||+|+-+..
T Consensus 186 Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 186 GAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp TCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred CCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 37899999999 8887777887766666 789999999998753
No 139
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=72.49 E-value=3.3 Score=36.27 Aligned_cols=39 Identities=18% Similarity=-0.019 Sum_probs=31.7
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
.++|+++++|++|.. ++ .|.+.+|..+.+|.||.|+-..
T Consensus 121 gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~ 159 (379)
T 3alj_A 121 GVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVG 159 (379)
T ss_dssp TCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTT
T ss_pred CCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCcc
Confidence 368999999999987 34 7777666678999999998753
No 140
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=72.31 E-value=3 Score=35.79 Aligned_cols=38 Identities=8% Similarity=0.048 Sum_probs=30.7
Q ss_pred eeeecCceeeEEEEeCCeEEE-EeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHL-RENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l-~~~~g~~~~aD~VVlA~Pa 87 (246)
+++++++ |..|.. ++.|.| .++++..+.||.||+|+-.
T Consensus 86 v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~ 124 (335)
T 2a87_A 86 ADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGA 124 (335)
T ss_dssp CEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCE
T ss_pred CEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCC
Confidence 6788887 888987 667888 7766667899999999864
No 141
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=72.04 E-value=3.8 Score=37.33 Aligned_cols=101 Identities=11% Similarity=-0.024 Sum_probs=66.4
Q ss_pred eeeecCceeeEEEEeC-CeEEEEeC--Cce--eeccCEEEEcCCHHHHHHh-hccCChHHHHHHhhhhCCCCCHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFN-GMWHLREN--VKP--RGQFDVVVIAHNGKCANWL-LGSSGLPQIARQMKENIPTATAEKVKKG 121 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~-~~w~l~~~--~g~--~~~aD~VVlA~Pa~~A~~L-L~~~~~~~la~~L~~~~~~~~~eel~~~ 121 (246)
++|+++++|.+|...+ ++..+... +|. .+++|.||+|+.-..-..| +.
T Consensus 226 v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~l~-------------------------- 279 (466)
T 3l8k_A 226 LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEGAR-------------------------- 279 (466)
T ss_dssp CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTTTG--------------------------
T ss_pred EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccchh--------------------------
Confidence 6889999999999877 78777765 453 6789999999873111011 10
Q ss_pred HHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHHH
Q 043717 122 MLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIADY 198 (246)
Q Consensus 122 ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~~ 198 (246)
-+|+.. .+. . +... ..+.+..|+||.+||-..++ ....|+..|..+|+.|+..
T Consensus 280 -------~~gl~~----~~~--------G-i~vd----~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 280 -------EIGLSI----SKT--------G-IVVD----ETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp -------GGTCCB----CSS--------S-BCCC----TTCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred -------hcCcee----CCC--------C-EeEC----CCccCCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 112210 000 0 1111 12234568999999988764 7789999999999999853
No 142
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=72.03 E-value=3.3 Score=38.37 Aligned_cols=47 Identities=11% Similarity=-0.030 Sum_probs=36.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc---eeeccCEEEEcCCHHH-HHHhh
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK---PRGQFDVVVIAHNGKC-ANWLL 94 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g---~~~~aD~VVlA~Pa~~-A~~LL 94 (246)
++|+++++|++|+..++++.+++.++ .++.+|.||.|.-+.. .++++
T Consensus 122 v~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~l 172 (499)
T 2qa2_A 122 AELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKAA 172 (499)
T ss_dssp CEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred CEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHHc
Confidence 68999999999999888998876443 2678999999987654 34444
No 143
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=71.78 E-value=3.1 Score=35.15 Aligned_cols=38 Identities=18% Similarity=0.229 Sum_probs=30.3
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
+++++++ |..+...++.|.+ ..++..+.||.||+|+-.
T Consensus 77 ~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 77 TEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGA 114 (320)
T ss_dssp CEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCE
T ss_pred CEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCC
Confidence 6788886 9999888888988 444557789999999753
No 144
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=71.75 E-value=4.2 Score=37.78 Aligned_cols=40 Identities=8% Similarity=0.118 Sum_probs=32.5
Q ss_pred eeeecCceeeEEEEeCCeEEEEe-CCc--eeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE-NVK--PRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~-~~g--~~~~aD~VVlA~Pa 87 (246)
++++++++|++|.+.++.+.+.. .++ ..+.||+|||||-.
T Consensus 73 i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 73 VEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp CEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCC
Confidence 68899999999999888888865 223 36789999999754
No 145
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=71.14 E-value=5 Score=36.36 Aligned_cols=102 Identities=13% Similarity=-0.024 Sum_probs=64.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeC-Cc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLREN-VK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLE 124 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~-~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~ 124 (246)
++|+++++|.+|...+++..+... +| ..+++|.||+|+... +... ....+
T Consensus 227 v~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~------p~~~-------------~l~~~-------- 279 (464)
T 2a8x_A 227 VTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFA------PNVE-------------GYGLD-------- 279 (464)
T ss_dssp CEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEE------ECCS-------------SSCHH--------
T ss_pred CEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCC------ccCC-------------CCCch--------
Confidence 799999999999887766766652 34 568999999997631 1110 00001
Q ss_pred HHHHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 125 GVEAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 125 eL~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
-+|+.. .. -++.|- ..+.+..|+||.+||-..+. ....|+.+|..+|+.|..
T Consensus 280 ----~~gl~~----~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 280 ----KAGVAL----TDRKAIGVD-------------DYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp ----HHTCCB----CTTSSBCCC-------------TTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred ----hcCCcc----CCCCCEeEC-------------cCCccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 112210 00 011111 11234568999999988765 577899999999999874
No 146
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=71.08 E-value=3.7 Score=36.01 Aligned_cols=43 Identities=9% Similarity=-0.152 Sum_probs=33.5
Q ss_pred ceeeecCceeeEEEEeC-CeEEEEe-CCce--eeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEPFN-GMWHLRE-NVKP--RGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~-~~w~l~~-~~g~--~~~aD~VVlA~Pa~~ 89 (246)
.++|+++++|++|...+ ++|.|.+ ++|. .+.+|.||.|.-...
T Consensus 117 g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 117 GATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp TCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTC
T ss_pred CCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCc
Confidence 36899999999998763 5687776 5564 689999999887543
No 147
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=70.67 E-value=4.4 Score=35.22 Aligned_cols=40 Identities=18% Similarity=0.064 Sum_probs=33.1
Q ss_pred eeecCceeeEEEEeC-CeEEEEeCCceeeccCEEEEcCCHH
Q 043717 49 SIVRPCWISNLEPFN-GMWHLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 49 ~I~l~t~V~~I~~~~-~~w~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
+|+++++|++++..+ +++.|.+.+|.++++|.||-|--..
T Consensus 125 ~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~ 165 (412)
T 4hb9_A 125 TIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSN 165 (412)
T ss_dssp TEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTT
T ss_pred eEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCC
Confidence 689999999998864 4688988888788999999886644
No 148
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=70.32 E-value=3.1 Score=39.42 Aligned_cols=47 Identities=13% Similarity=-0.032 Sum_probs=37.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEe--CCc-eeeccCEEEEcCCHH-HHHHhh
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE--NVK-PRGQFDVVVIAHNGK-CANWLL 94 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~--~~g-~~~~aD~VVlA~Pa~-~A~~LL 94 (246)
++|+++++|++|+..+++|.|.. .+| .++.+|.||.|.-.. ..++++
T Consensus 163 v~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 163 AEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp EECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred CEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 68999999999999989998876 566 678999999998754 333444
No 149
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=70.04 E-value=4.4 Score=36.85 Aligned_cols=101 Identities=9% Similarity=0.024 Sum_probs=64.1
Q ss_pred eeeecCceeeEEEE--eCCeEEEEeC-----CceeeccCEEEEcCCHHHHHH--hhccCChHHHHHHhhhhCCCCCHHHH
Q 043717 48 VSIVRPCWISNLEP--FNGMWHLREN-----VKPRGQFDVVVIAHNGKCANW--LLGSSGLPQIARQMKENIPTATAEKV 118 (246)
Q Consensus 48 ~~I~l~t~V~~I~~--~~~~w~l~~~-----~g~~~~aD~VVlA~Pa~~A~~--LL~~~~~~~la~~L~~~~~~~~~eel 118 (246)
++|+++++|.+|.. .++.+.+... ++..+++|.||+|+....... +++.
T Consensus 239 v~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l~~---------------------- 296 (478)
T 1v59_A 239 LDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGAEK---------------------- 296 (478)
T ss_dssp CEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCTTT----------------------
T ss_pred CEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCchh----------------------
Confidence 79999999999987 5666766553 345689999999986311100 0110
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 119 KKGMLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 119 ~~~ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+|+.. ..--++.|. ..+.+..|+||.+||-..+. ....|+.+|..+|+.|..
T Consensus 297 -----------~g~~~---~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 297 -----------IGLEV---DKRGRLVID-------------DQFNSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp -----------TTCCB---CTTSCBCCC-------------TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred -----------cCcee---CCCCCEeEC-------------cCCccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 11110 000001111 11224568999999998765 677899999999999986
No 150
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=69.74 E-value=3 Score=37.09 Aligned_cols=41 Identities=15% Similarity=-0.052 Sum_probs=32.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCC---c--eeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENV---K--PRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~---g--~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|.. +++|.|.+.+ | ..+.+|.||.|.-...
T Consensus 124 ~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 124 QAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp TSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred cEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccc
Confidence 47999999999998 7788876632 4 4678999999988543
No 151
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=69.61 E-value=5.4 Score=36.48 Aligned_cols=102 Identities=15% Similarity=0.042 Sum_probs=66.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEeC---Cc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLREN---VK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGM 122 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~---~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~l 122 (246)
++|+++++|.+|...++++.+... +| ..+++|.||+|+.-. +... .+..+
T Consensus 254 V~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~------p~~~-------------~l~l~------ 308 (491)
T 3urh_A 254 IDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRK------PSTD-------------GLGLA------ 308 (491)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCE------ECCT-------------TSCHH------
T ss_pred CEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCc------cCCC-------------ccCch------
Confidence 789999999999998888776653 13 567899999998731 1110 00000
Q ss_pred HHHHHHHhCCCCCCCCCCc-eeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 123 LEGVEAALGRPKGSLQKPI-YTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 123 l~eL~~llg~~~~~~~~p~-~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
-.|+.. .+. ++.+. ..+.+..|+||.+||-..++ ....|+..|+.+|+.|+.
T Consensus 309 ------~~g~~~----~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 309 ------KAGVVL----DSRGRVEID-------------RHFQTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp ------HHTCCB----CTTSCBCCC-------------TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred ------hcCceE----CCCCCEeEC-------------CCCCCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcC
Confidence 112211 000 11111 11335668999999988665 888999999999998875
No 152
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=69.57 E-value=6.5 Score=36.86 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=30.5
Q ss_pred eeeecCceeeEEEEeC-Ce---EEEEeCCce--eeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFN-GM---WHLRENVKP--RGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~-~~---w~l~~~~g~--~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|...+ ++ +.+...+|. .+.+|.||+|+-..
T Consensus 270 v~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 270 IDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp CEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred CEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 7899999999999876 54 334332443 57899999999753
No 153
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=69.03 E-value=5.1 Score=37.56 Aligned_cols=42 Identities=12% Similarity=-0.046 Sum_probs=31.3
Q ss_pred eeeecCceeeEEEEeC-Ce---EEEEeCCce--eeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFN-GM---WHLRENVKP--RGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~-~~---w~l~~~~g~--~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|...+ ++ +.+...+|. .+.+|.||+|+-...
T Consensus 265 v~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 265 IDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp CCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred CEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 7899999999999876 54 344433443 578999999987543
No 154
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=69.00 E-value=6.7 Score=33.15 Aligned_cols=38 Identities=11% Similarity=0.076 Sum_probs=31.0
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
+++++ ++|..|...++.|.|.++++ .+.+|.||+|+-.
T Consensus 87 v~~~~-~~v~~i~~~~~~~~v~~~~~-~~~~~~li~AtG~ 124 (319)
T 3cty_A 87 KIREG-VEVRSIKKTQGGFDIETNDD-TYHAKYVIITTGT 124 (319)
T ss_dssp EEEET-CCEEEEEEETTEEEEEESSS-EEEEEEEEECCCE
T ss_pred CEEEE-eeEEEEEEeCCEEEEEECCC-EEEeCEEEECCCC
Confidence 67777 78999998888898877544 6789999999764
No 155
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=68.72 E-value=7 Score=36.20 Aligned_cols=49 Identities=14% Similarity=0.109 Sum_probs=36.5
Q ss_pred ceeeecCceeeEEEEeC-C-e-EEEEe-C-Cc-----eeeccCEEEEcCCHHHHHHhhc
Q 043717 47 MVSIVRPCWISNLEPFN-G-M-WHLRE-N-VK-----PRGQFDVVVIAHNGKCANWLLG 95 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~-~-~-w~l~~-~-~g-----~~~~aD~VVlA~Pa~~A~~LL~ 95 (246)
+++|+++++|++|...+ + . ..|.. + +| ..+.++.||||+-+..+.+||.
T Consensus 241 n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL~ 299 (507)
T 1coy_A 241 KLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLLV 299 (507)
T ss_dssp CEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHHH
Confidence 48999999999999875 3 2 23333 2 33 3567899999999998888774
No 156
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=68.64 E-value=5.9 Score=35.37 Aligned_cols=96 Identities=17% Similarity=0.051 Sum_probs=62.0
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|. ++ .|.+.+|..+++|.||+|+... +.. ++ ++
T Consensus 202 V~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~------p~~-------------------~l----~~--- 245 (408)
T 2gqw_A 202 VDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVL------AND-------------------AL----AR--- 245 (408)
T ss_dssp CEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEE------ECC-------------------HH----HH---
T ss_pred cEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCC------ccH-------------------HH----HH---
Confidence 7899999999998 34 5656666678999999998641 110 11 11
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-----------CHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-----------SVESAALSGMALANHIA 196 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-----------~ie~Av~SG~~aA~~l~ 196 (246)
-+|+.. . ..+.|. ..+.+..|+||.+||-.... .+..|+.+|..+|+.|.
T Consensus 246 -~~gl~~----~-~gi~Vd-------------~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 306 (408)
T 2gqw_A 246 -AAGLAC----D-DGIFVD-------------AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLV 306 (408)
T ss_dssp -HHTCCB----S-SSEECC-------------TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHH
T ss_pred -hCCCCC----C-CCEEEC-------------CCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhc
Confidence 123321 0 111111 11224568999999977542 56899999999999998
Q ss_pred HH
Q 043717 197 DY 198 (246)
Q Consensus 197 ~~ 198 (246)
..
T Consensus 307 g~ 308 (408)
T 2gqw_A 307 DP 308 (408)
T ss_dssp CT
T ss_pred CC
Confidence 53
No 157
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=68.60 E-value=6.9 Score=35.30 Aligned_cols=43 Identities=16% Similarity=-0.164 Sum_probs=32.8
Q ss_pred ceeeecCceeeEEEEeCCeEE-EEe--C-Cce--eeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEPFNGMWH-LRE--N-VKP--RGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~-l~~--~-~g~--~~~aD~VVlA~Pa~~ 89 (246)
.++|+++++|++|...++++. |.. . +|. .+.+|.||.|+-...
T Consensus 114 gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 114 GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 378999999999998887754 433 2 443 678999999987654
No 158
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=68.42 E-value=0.51 Score=42.47 Aligned_cols=36 Identities=8% Similarity=-0.185 Sum_probs=28.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceee-ccCEEEEcCCHHHHHHh
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRG-QFDVVVIAHNGKCANWL 93 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~-~aD~VVlA~Pa~~A~~L 93 (246)
.+|+++++|++|.+. | + .+ .||+||+|+|++++.++
T Consensus 217 ~~I~l~~~V~~I~~~---v----~---~~~~aD~VI~t~p~~~l~~~ 253 (399)
T 1v0j_A 217 IEVRLNTDWFDVRGQ---L----R---PGSPAAPVVYTGPLDRYFDY 253 (399)
T ss_dssp EEEECSCCHHHHHHH---H----T---TTSTTCCEEECSCHHHHTTT
T ss_pred eEEEECCchhhhhhh---h----h---hcccCCEEEECCcHHHHHhh
Confidence 589999999988642 2 1 34 69999999999998775
No 159
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=68.15 E-value=4.3 Score=37.25 Aligned_cols=39 Identities=5% Similarity=0.034 Sum_probs=31.3
Q ss_pred eeeecCceeeEEEEeCCeEEEE-eCCceeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFNGMWHLR-ENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~-~~~g~~~~aD~VVlA~P 86 (246)
++++++++|..|...++.+.+. ..++..+.||.||||+-
T Consensus 107 v~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG 146 (490)
T 2bc0_A 107 AKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATG 146 (490)
T ss_dssp CEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCC
T ss_pred CEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCC
Confidence 6889999999998888888876 32235678999999885
No 160
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=67.98 E-value=1.2 Score=39.92 Aligned_cols=18 Identities=11% Similarity=-0.036 Sum_probs=15.6
Q ss_pred ccCEEEEcCCHHHHHHhh
Q 043717 77 QFDVVVIAHNGKCANWLL 94 (246)
Q Consensus 77 ~aD~VVlA~Pa~~A~~LL 94 (246)
.||+||+|+|++++.+++
T Consensus 226 ~~d~VI~a~p~~~~~~~~ 243 (384)
T 2bi7_A 226 HYDHVFYSGPLDAFYGYQ 243 (384)
T ss_dssp GSSEEEECSCHHHHTTTT
T ss_pred cCCEEEEcCCHHHHHHhh
Confidence 399999999999988753
No 161
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=67.77 E-value=7.2 Score=36.02 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=36.3
Q ss_pred ceeeecCceeeEEEEeC-C-eE-EEEe--CCc-----eeeccCEEEEcCCHHHHHHhhc
Q 043717 47 MVSIVRPCWISNLEPFN-G-MW-HLRE--NVK-----PRGQFDVVVIAHNGKCANWLLG 95 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~-~-~w-~l~~--~~g-----~~~~aD~VVlA~Pa~~A~~LL~ 95 (246)
+++|+++++|++|...+ + .. .|.. .+| ..+.++.||||+-+..+.+||.
T Consensus 236 n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 236 KVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp SEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHH
Confidence 48999999999998874 3 22 2333 233 3567999999999998877775
No 162
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=67.70 E-value=6.4 Score=36.32 Aligned_cols=41 Identities=10% Similarity=-0.027 Sum_probs=32.6
Q ss_pred eeeecCceeeEEEEeCCe---EEEEeCCc--eeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFNGM---WHLRENVK--PRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~---w~l~~~~g--~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|...+++ +.+...+| ..+.+|.||.|+-..
T Consensus 126 v~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~ 171 (512)
T 3e1t_A 126 VDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNR 171 (512)
T ss_dssp CEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTT
T ss_pred CEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcc
Confidence 689999999999998775 44555455 377899999998764
No 163
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=67.63 E-value=0.57 Score=41.70 Aligned_cols=35 Identities=3% Similarity=-0.261 Sum_probs=27.1
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHh
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWL 93 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~L 93 (246)
++|+++++|.+|.+. | ...||+||+|+|++++..+
T Consensus 205 ~~i~l~~~V~~i~~~---v--------~~~~D~VV~a~p~~~~~~~ 239 (367)
T 1i8t_A 205 VDVKLGIDFLKDKDS---L--------ASKAHRIIYTGPIDQYFDY 239 (367)
T ss_dssp SEEECSCCGGGSHHH---H--------HTTEEEEEECSCHHHHTTT
T ss_pred CEEEeCCceeeechh---h--------hccCCEEEEeccHHHHHHH
Confidence 578999998887531 2 2479999999999998654
No 164
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=67.55 E-value=5.8 Score=36.27 Aligned_cols=40 Identities=10% Similarity=0.076 Sum_probs=32.3
Q ss_pred ceeeecCceeeEEEEeCCeEEEEe-CCce--eeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRE-NVKP--RGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~-~~g~--~~~aD~VVlA~P 86 (246)
.++++++++|..|...++.+.+.. .+|. .+.||.||+|+-
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 149 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATG 149 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCC
Confidence 478999999999988888888865 3343 678999999975
No 165
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=67.29 E-value=6.2 Score=33.93 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=31.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeec-cCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQ-FDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~-aD~VVlA~Pa 87 (246)
++|+++++|.+|...++++.|.+.+|..+. +|.||+|+..
T Consensus 230 v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 230 IEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp EEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCB
T ss_pred EEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeecc
Confidence 889999999999887778878776664444 6999998763
No 166
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=67.01 E-value=6.8 Score=36.93 Aligned_cols=42 Identities=5% Similarity=-0.132 Sum_probs=32.5
Q ss_pred eeeecCceeeEEEEeCCe-EEEEe----CCc-eeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLRE----NVK-PRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~----~~g-~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|.+.+++ |.|.. .++ ..+.+|.||+|+-++.
T Consensus 203 a~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 203 AYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp CEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred CeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 689999999999988765 45543 232 3678999999998764
No 167
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=66.97 E-value=7.7 Score=36.52 Aligned_cols=41 Identities=20% Similarity=0.082 Sum_probs=29.4
Q ss_pred eeeecCceeeEEEEeC-Ce---EEEEeCCc--eeeccCEEEEcCCHH
Q 043717 48 VSIVRPCWISNLEPFN-GM---WHLRENVK--PRGQFDVVVIAHNGK 88 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~-~~---w~l~~~~g--~~~~aD~VVlA~Pa~ 88 (246)
++|+++++|++|...+ ++ +.+...+| ..+.+|.||||+-..
T Consensus 270 v~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 270 TDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp CEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred CeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 7999999999998765 43 33433244 357899999998743
No 168
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=66.86 E-value=5.1 Score=35.76 Aligned_cols=39 Identities=13% Similarity=0.108 Sum_probs=31.0
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++++++|+.|.+... .|.+.++..+.||+|||||-.
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~ 109 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGS 109 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCC
Confidence 479999999999987654 455566667899999999853
No 169
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=66.81 E-value=5.7 Score=35.84 Aligned_cols=38 Identities=8% Similarity=0.088 Sum_probs=30.0
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
.++++++++|+.|.+.+. .|.++++..+.||.||+|+-
T Consensus 74 gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG 111 (431)
T 1q1r_A 74 NIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATG 111 (431)
T ss_dssp TEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCC
Confidence 378999999999987654 45555566789999999874
No 170
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=66.68 E-value=5.4 Score=36.07 Aligned_cols=41 Identities=7% Similarity=0.122 Sum_probs=33.0
Q ss_pred ceeeecCceeeEEEEeCCeEEEEe-CCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRE-NVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~-~~g~~~~aD~VVlA~Pa 87 (246)
.++++++++|+.|...++.|.+.. .++..+.||.||||+-.
T Consensus 72 gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 72 KIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp TEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCC
T ss_pred CCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCc
Confidence 378899999999999888888753 33457789999999754
No 171
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=66.58 E-value=3.7 Score=36.42 Aligned_cols=37 Identities=22% Similarity=0.140 Sum_probs=31.4
Q ss_pred CCCCEEEEcCCCC---CCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 165 PHGRAGICGNWLL---GSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 165 ~~~gL~laGDw~~---G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
..|+||.+||-.. ......|...|..+|+.|...+..
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 4689999999885 347889999999999999998843
No 172
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=66.36 E-value=6.9 Score=36.51 Aligned_cols=42 Identities=12% Similarity=-0.064 Sum_probs=33.3
Q ss_pred ceeeecCceeeEEEEeCCe--EEEEeCCceeeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEPFNGM--WHLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~--w~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
+++|+++ +|++|...+++ +.|.+.+|..+.+|.||+|+-...
T Consensus 209 Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 209 GVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred CcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 4789999 99999886555 567676666789999999987654
No 173
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=65.95 E-value=4.4 Score=37.34 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=30.9
Q ss_pred cceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 46 SMVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 46 ~m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
..++++++++|..|...+. .|.+++|..+.||+|||||-
T Consensus 103 ~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATG 141 (493)
T 1m6i_A 103 GGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATG 141 (493)
T ss_dssp CEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCC
T ss_pred CCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCC
Confidence 3589999999999987654 55566666789999999874
No 174
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=65.90 E-value=6.7 Score=35.60 Aligned_cols=40 Identities=10% Similarity=0.084 Sum_probs=31.9
Q ss_pred ceeeecCceeeEEEEeCCeEEEEe-CCc--eeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRE-NVK--PRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~-~~g--~~~~aD~VVlA~P 86 (246)
.++++++++|+.|.+.++.+.+.. .++ ..+.||.||+|+-
T Consensus 80 gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG 122 (472)
T 3iwa_A 80 DVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALG 122 (472)
T ss_dssp -CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCC
Confidence 478899999999999888888865 223 3678999999975
No 175
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=65.72 E-value=4.6 Score=36.13 Aligned_cols=40 Identities=10% Similarity=0.078 Sum_probs=31.1
Q ss_pred cceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 46 SMVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 46 ~m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
..++++++++|+.|.+.+ +.|..+++..+.||.||+|+-.
T Consensus 72 ~~v~~~~~~~v~~i~~~~--~~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 72 PEVEWLLGVTAQSFDPQA--HTVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp CSCEEEETCCEEEEETTT--TEEEETTSCEEECSEEEECCCE
T ss_pred CCCEEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCCC
Confidence 347999999999998754 4566666667899999998853
No 176
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=65.21 E-value=4.9 Score=34.09 Aligned_cols=39 Identities=5% Similarity=-0.084 Sum_probs=29.7
Q ss_pred eeeecCceeeEEEEe--CCe-EEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPF--NGM-WHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~--~~~-w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++++. ++|..|... +++ |.|.+.++..+.||.||+|+-.
T Consensus 80 v~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 80 AKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGA 121 (325)
T ss_dssp CEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCE
T ss_pred CEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCC
Confidence 56666 589999887 554 8876655667899999999865
No 177
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=64.82 E-value=8.6 Score=36.23 Aligned_cols=104 Identities=14% Similarity=0.020 Sum_probs=66.5
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
+++++++.|..+...+++..+...++..+.+|.|++|+-- -+.. ..+..+
T Consensus 278 i~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR------~Pnt-------------~~L~le----------- 327 (542)
T 4b1b_A 278 VMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR------KGDI-------------DGLNLE----------- 327 (542)
T ss_dssp CEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE------EESC-------------GGGCGG-----------
T ss_pred ceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc------cCCc-------------cccCcc-----------
Confidence 6899999999999999999888866667789999999742 1111 000000
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS--SVESAALSGMALANHIAD 197 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~ 197 (246)
-.|+. +..-...+.. ...+.+..|+||.+||-..+. -..-|...|+.+++.|..
T Consensus 328 -~~gv~-----------~~~~~~~i~v----d~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~aa~~i~g 383 (542)
T 4b1b_A 328 -SLNMN-----------VNKSNNKIIA----DHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFK 383 (542)
T ss_dssp -GTTCC-----------EETTTTEECC----CTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHHHHHHHS
T ss_pred -cceee-----------ecccCceEec----cccccccCCCeEEeccccCCchhHHHHHHHHHHHHHHHHhc
Confidence 01110 1111111110 112345668999999998763 678888999999988875
No 178
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=64.71 E-value=8.6 Score=35.67 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=33.4
Q ss_pred ceeeecCceeeEEEEe---CCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPF---NGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~---~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++++++|+.|.+. ++.|.|.+++|..+.||.||+|+-+
T Consensus 281 gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~ 324 (521)
T 1hyu_A 281 DVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGA 324 (521)
T ss_dssp CEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCE
T ss_pred CCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCC
Confidence 3789999999999864 3479998877767899999999864
No 179
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=64.64 E-value=8.1 Score=35.35 Aligned_cols=42 Identities=10% Similarity=-0.161 Sum_probs=33.3
Q ss_pred ceeeecCceeeEEEEeCCe--EEEEeCCceeeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEPFNGM--WHLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~--w~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
.++++.+ +|++|...+++ +.|.+++|..+.+|.||.|+-...
T Consensus 187 gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 187 GVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred CCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 3789999 99999886555 567776666789999999988754
No 180
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.40 E-value=4.6 Score=35.63 Aligned_cols=38 Identities=13% Similarity=0.006 Sum_probs=29.1
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++++++|+.|.+.. +.|. .++..+.||.|||||-.
T Consensus 74 ~v~~~~g~~v~~id~~~--~~V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGR--KVVI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp TEEEECSCCEEEEETTT--TEEE-ESSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEECCC--CEEE-ECCcEEECCEEEECCCC
Confidence 37899999999998754 4555 34457899999999763
No 181
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.21 E-value=5.4 Score=36.10 Aligned_cols=103 Identities=13% Similarity=0.033 Sum_probs=63.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEeC---Cc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLREN---VK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGM 122 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~---~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~l 122 (246)
++|+++++|.+|...++++.+... +| ..+++|.||+|+....-..+|. ..
T Consensus 233 v~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~-----------------~~-------- 287 (470)
T 1dxl_A 233 MKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSGLN-----------------LD-------- 287 (470)
T ss_dssp CCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCTTSC-----------------CT--------
T ss_pred CEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCCCCC-----------------ch--------
Confidence 789999999999887666766542 33 5689999999986421111110 00
Q ss_pred HHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 123 LEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 123 l~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
-+|+.. .. +..+... ..+.+..|+||.+||-..+. ....|+.+|..+|+.|..
T Consensus 288 ------~~gl~~----~~--------~G~i~vd----~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 288 ------KIGVET----DK--------LGRILVN----ERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp ------TTTCCB----CS--------SSCBCCC----TTCBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred ------hcCCcc----CC--------CCCEeEC----cCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 011110 00 0001111 11234568999999998765 577899999999998875
No 182
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=62.75 E-value=6.1 Score=36.50 Aligned_cols=43 Identities=28% Similarity=0.358 Sum_probs=33.4
Q ss_pred ceeeecCceeeEEEEe---CCeEEEEe--C-Cc--eeeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEPF---NGMWHLRE--N-VK--PRGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~---~~~w~l~~--~-~g--~~~~aD~VVlA~Pa~~ 89 (246)
.++|+++++|++|... +++|.|.. . +| ..+.+|.||+|+-...
T Consensus 180 gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 180 GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 3789999999999874 35687766 3 45 4678999999987654
No 183
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=62.56 E-value=8.9 Score=35.33 Aligned_cols=42 Identities=17% Similarity=-0.005 Sum_probs=30.2
Q ss_pred eeeecCceeeEEEEe-CCeE---EEEeCCc-eeeccC-EEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPF-NGMW---HLRENVK-PRGQFD-VVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~-~~~w---~l~~~~g-~~~~aD-~VVlA~Pa~~ 89 (246)
++|+++++|++|... ++++ .+..+++ ..+.+| .||||+-...
T Consensus 217 v~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 217 VRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 799999999999987 4443 3333333 357896 9999988654
No 184
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=62.11 E-value=26 Score=33.03 Aligned_cols=36 Identities=17% Similarity=0.090 Sum_probs=31.0
Q ss_pred CCCCEEEEcCCCC-CCCHHHHHHHHHHHHHHHHHHhc
Q 043717 165 PHGRAGICGNWLL-GSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 165 ~~~gL~laGDw~~-G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
..+|||.|||--+ .++|-.|..+|..+|+.|+..+.
T Consensus 507 ~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 507 NLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp TCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCChhhHHHHHHHHHHHHHHHHHHHhh
Confidence 5689999999875 34999999999999999988763
No 185
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=61.32 E-value=6.9 Score=36.80 Aligned_cols=42 Identities=10% Similarity=-0.168 Sum_probs=32.6
Q ss_pred eeeecCceeeEEEEeCCe-EEEEeC----C-ceeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGM-WHLREN----V-KPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~-w~l~~~----~-g~~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|...+++ |.|... + +..+.+|.||+|+-+..
T Consensus 185 ~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 185 AVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp CEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred CEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 689999999999998876 445542 2 24678999999998654
No 186
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=61.28 E-value=11 Score=34.40 Aligned_cols=39 Identities=8% Similarity=0.060 Sum_probs=30.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|...++.+.+.++++ .+++|.||+|+..
T Consensus 242 v~i~~~~~v~~i~~~~~v~~v~~~~~-~i~~D~vi~a~G~ 280 (480)
T 3cgb_A 242 IEILTNENVKAFKGNERVEAVETDKG-TYKADLVLVSVGV 280 (480)
T ss_dssp CEEECSCCEEEEEESSBEEEEEETTE-EEECSEEEECSCE
T ss_pred cEEEcCCEEEEEEcCCcEEEEEECCC-EEEcCEEEECcCC
Confidence 78999999999987643345655554 6799999999864
No 187
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=60.82 E-value=7.1 Score=36.07 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=30.1
Q ss_pred eeeecCceeeEEEEeC--------CeEEEEeCC---c--eeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFN--------GMWHLRENV---K--PRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~--------~~w~l~~~~---g--~~~~aD~VVlA~P 86 (246)
..|+++++|++|++.+ +.|+|+..+ + .+..+++||+|+.
T Consensus 160 ~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG 211 (501)
T 4b63_A 160 DVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIG 211 (501)
T ss_dssp GGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCC
T ss_pred CceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcC
Confidence 4699999999999764 259887632 2 3567999999987
No 188
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=60.60 E-value=9 Score=35.86 Aligned_cols=40 Identities=8% Similarity=0.196 Sum_probs=32.5
Q ss_pred eeeecCceeeEEEEeCCeEEEEe-CCce--eeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE-NVKP--RGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~-~~g~--~~~aD~VVlA~Pa 87 (246)
++++++++|+.|.+.++.+.+.. .++. .+.||.||+|+-.
T Consensus 108 i~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 108 LDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 67899999999999888888865 3343 6789999999753
No 189
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=60.51 E-value=5.3 Score=35.89 Aligned_cols=33 Identities=24% Similarity=0.074 Sum_probs=26.8
Q ss_pred CCCCCEEEEcCCC------CCCCHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWL------LGSSVESAALSGMALANHIA 196 (246)
Q Consensus 164 ~~~~gL~laGDw~------~G~~ie~Av~SG~~aA~~l~ 196 (246)
...||||+||+-+ +|=.+..||.||..|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 4679999999644 34489999999999998764
No 190
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=60.23 E-value=8.1 Score=36.17 Aligned_cols=38 Identities=21% Similarity=0.149 Sum_probs=30.5
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|...+++ |...+|..+++|.||+|+..
T Consensus 243 V~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~ 280 (588)
T 3ics_A 243 VELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGV 280 (588)
T ss_dssp CEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCE
T ss_pred CEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCC
Confidence 799999999999876555 44455667899999999873
No 191
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=59.74 E-value=9 Score=34.46 Aligned_cols=39 Identities=15% Similarity=0.067 Sum_probs=30.0
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|...++.+.+..++ ..+++|.||+|+..
T Consensus 206 v~i~~~~~v~~i~~~~~v~~v~~~~-~~i~~d~vi~a~G~ 244 (447)
T 1nhp_A 206 ITIATGETVERYEGDGRVQKVVTDK-NAYDADLVVVAVGV 244 (447)
T ss_dssp EEEEESCCEEEEECSSBCCEEEESS-CEEECSEEEECSCE
T ss_pred CEEEcCCEEEEEEccCcEEEEEECC-CEEECCEEEECcCC
Confidence 7999999999998763333565554 46799999999874
No 192
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=59.73 E-value=12 Score=33.99 Aligned_cols=103 Identities=13% Similarity=0.029 Sum_probs=64.1
Q ss_pred eeeecCceeeEEEEeCCe--EEEEeCC-------ceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHH
Q 043717 48 VSIVRPCWISNLEPFNGM--WHLRENV-------KPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKV 118 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~--w~l~~~~-------g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel 118 (246)
++|+++++|.+|+..+++ ..+.+.+ +..+++|.||+|+.-. +... .+..
T Consensus 243 v~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~------p~~~-------------~l~l--- 300 (478)
T 3dk9_A 243 VEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV------PNTK-------------DLSL--- 300 (478)
T ss_dssp CEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE------ESCT-------------TSCG---
T ss_pred CEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc------cCCC-------------CCCc---
Confidence 799999999999987655 5565542 2467899999998731 1110 0000
Q ss_pred HHHHHHHHHHHhCCCCCCCCCC-ceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHH
Q 043717 119 KKGMLEGVEAALGRPKGSLQKP-IYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIA 196 (246)
Q Consensus 119 ~~~ll~eL~~llg~~~~~~~~p-~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~ 196 (246)
+.+|+.. .. -++.+- ..+.+..|+||.+||-..+. ....|+..|+.+|+.|+
T Consensus 301 ---------~~~g~~~----~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 354 (478)
T 3dk9_A 301 ---------NKLGIQT----DDKGHIIVD-------------EFQNTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLF 354 (478)
T ss_dssp ---------GGGTCCB----CTTCCBCCC-------------TTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHH
T ss_pred ---------hhcCCee----CCCCCEeeC-------------CCcccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHc
Confidence 0112210 00 011111 11234568999999988655 78899999999999988
Q ss_pred HH
Q 043717 197 DY 198 (246)
Q Consensus 197 ~~ 198 (246)
..
T Consensus 355 ~~ 356 (478)
T 3dk9_A 355 EY 356 (478)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 193
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.42 E-value=8.2 Score=35.00 Aligned_cols=100 Identities=12% Similarity=-0.006 Sum_probs=62.4
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc--eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK--PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEG 125 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g--~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~e 125 (246)
++|+++++|.+|.. + ++.+..++| ..+++|.||+|+.......+| ..
T Consensus 227 v~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~~l-------------------~~---------- 275 (458)
T 1lvl_A 227 IALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRRPRTKGF-------------------NL---------- 275 (458)
T ss_dssp CEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEEECCSSS-------------------SG----------
T ss_pred CEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCCcCCCCC-------------------Cc----------
Confidence 78999999999987 4 466654334 578999999998742110110 00
Q ss_pred HHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHH
Q 043717 126 VEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLGS-SVESAALSGMALANHIAD 197 (246)
Q Consensus 126 L~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~ 197 (246)
+.+|+.. ...++.|. ..+.+..|+||.+||-..+. ....|+..|..+|+.|..
T Consensus 276 --~~~g~~~----~~~~i~vd-------------~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 276 --ECLDLKM----NGAAIAID-------------ERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp --GGSCCCE----ETTEECCC-------------TTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHTT
T ss_pred --HhcCCcc----cCCEEeEC-------------CCCcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHHhcC
Confidence 0112210 00011111 11234568999999998766 677899999999998874
No 194
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=58.99 E-value=7.5 Score=36.29 Aligned_cols=45 Identities=7% Similarity=-0.032 Sum_probs=34.8
Q ss_pred eecCceeeEEEEeCCeEEEEeCC---c--eeeccCEEEEcCCHHH-HHHhh
Q 043717 50 IVRPCWISNLEPFNGMWHLRENV---K--PRGQFDVVVIAHNGKC-ANWLL 94 (246)
Q Consensus 50 I~l~t~V~~I~~~~~~w~l~~~~---g--~~~~aD~VVlA~Pa~~-A~~LL 94 (246)
|+++++|++|+..+++|.++..+ | .++.+|.||.|.-+.. .++++
T Consensus 152 v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 202 (549)
T 2r0c_A 152 LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKAL 202 (549)
T ss_dssp EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHH
T ss_pred cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHc
Confidence 99999999999988888876532 4 4678999999987643 33444
No 195
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=58.68 E-value=6.3 Score=35.64 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=28.0
Q ss_pred CCCCEEEEcCC------CCCCCHHHHHHHHHHHHHHHHHHh
Q 043717 165 PHGRAGICGNW------LLGSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 165 ~~~gL~laGDw------~~G~~ie~Av~SG~~aA~~l~~~l 199 (246)
..||||+||.- ++|-.+..||.+|+.|++.+.+..
T Consensus 403 ~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 403 FTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp SSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 57899999943 334489999999999999887654
No 196
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=57.93 E-value=13 Score=33.44 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=30.1
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCc-eeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVK-PRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g-~~~~aD~VVlA~P 86 (246)
+++++++++|..+.. +.+.+..+++ ..+.||.|||||-
T Consensus 73 gi~v~~~~~v~~i~~--~~~~v~~~~g~~~~~~d~lviAtG 111 (449)
T 3kd9_A 73 GIDLHLNAEVIEVDT--GYVRVRENGGEKSYEWDYLVFANG 111 (449)
T ss_dssp TCEEETTCEEEEECS--SEEEEECSSSEEEEECSEEEECCC
T ss_pred CcEEEecCEEEEEec--CCCEEEECCceEEEEcCEEEECCC
Confidence 478999999999865 3477776666 4789999999975
No 197
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=57.54 E-value=13 Score=34.36 Aligned_cols=42 Identities=12% Similarity=-0.074 Sum_probs=32.8
Q ss_pred ceeeecCceeeEEEEeCCe--EEEEeCCceeeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEPFNGM--WHLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~--w~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
.++++.+ +|++|...+++ +.|.+++|..+.+|.||.|+-...
T Consensus 179 gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 179 GVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp TCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred CCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 3788999 89999886554 567776666789999999987654
No 198
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=57.05 E-value=9.2 Score=34.84 Aligned_cols=103 Identities=16% Similarity=0.063 Sum_probs=63.0
Q ss_pred eeeecCceeeEEEEeCC-eEEEEeCCc-----eeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNG-MWHLRENVK-----PRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKG 121 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~-~w~l~~~~g-----~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ 121 (246)
++|+++++|.+|...++ ...|.+.++ ..+++|.||+|+.-.....+|.-
T Consensus 242 v~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l------------------------- 296 (483)
T 3dgh_A 242 IPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNL------------------------- 296 (483)
T ss_dssp CCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTG-------------------------
T ss_pred CEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCcCcCCc-------------------------
Confidence 78999999999988654 355554222 36789999999863211111100
Q ss_pred HHHHHHHHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCCC-C-CHHHHHHHHHHHHHHHHHH
Q 043717 122 MLEGVEAALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLLG-S-SVESAALSGMALANHIADY 198 (246)
Q Consensus 122 ll~eL~~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~G-~-~ie~Av~SG~~aA~~l~~~ 198 (246)
+-.|+.. ..-++.|- ..+.+..|+||.+||-..| + ....|+..|+.+|+.|+..
T Consensus 297 ------~~~gl~~----~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 297 ------PNAGVTV----QKDKIPVD-------------SQEATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp ------GGTTCCC----BTTBBCCC-------------TTCBCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHSC
T ss_pred ------hhcCccc----cCCEEEEC-------------cCCccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcCC
Confidence 0012210 00111111 1123456899999999744 3 7889999999999998853
No 199
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=56.96 E-value=16 Score=32.76 Aligned_cols=37 Identities=11% Similarity=-0.156 Sum_probs=31.6
Q ss_pred CCCCEEEEcCCCCCC-------------CHHHHHHHHHHHHHHHHHHhcC
Q 043717 165 PHGRAGICGNWLLGS-------------SVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 165 ~~~gL~laGDw~~G~-------------~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
..|+||.+||-.... ....|+..|..+|+.|...+.-
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g 345 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEG 345 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 689999999987632 6789999999999999998853
No 200
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=56.60 E-value=11 Score=35.91 Aligned_cols=42 Identities=10% Similarity=-0.023 Sum_probs=33.7
Q ss_pred eeeecCceeeEEEEe-CCeEEEEeC-Cc--eeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPF-NGMWHLREN-VK--PRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~-~~~w~l~~~-~g--~~~~aD~VVlA~Pa~~ 89 (246)
++|+.+++|++|... ++.|.|.+. +| ..+.+|.||.|+-...
T Consensus 143 v~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 143 ITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp CEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred CEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 689999999999876 567888764 44 5789999999997543
No 201
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=56.23 E-value=8.9 Score=34.07 Aligned_cols=38 Identities=11% Similarity=0.119 Sum_probs=30.2
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
.++++++++|+.|.+.+. .|.++++..+.||.||+|+-
T Consensus 79 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG 116 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATG 116 (415)
T ss_dssp TEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCC
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccC
Confidence 478999999999987654 45556666789999999984
No 202
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=55.12 E-value=12 Score=33.88 Aligned_cols=40 Identities=3% Similarity=0.058 Sum_probs=31.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEe-C--CceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE-N--VKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~-~--~g~~~~aD~VVlA~Pa 87 (246)
++++++++|+.|........+.. . ++..+.||.+||||-+
T Consensus 72 i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs 114 (437)
T 4eqs_A 72 ITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGA 114 (437)
T ss_dssp CEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCE
T ss_pred CEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCC
Confidence 68899999999988877776654 2 2345789999999874
No 203
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=54.84 E-value=16 Score=32.20 Aligned_cols=39 Identities=8% Similarity=0.145 Sum_probs=26.2
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCc--eeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVK--PRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g--~~~~aD~VVlA~P 86 (246)
.++++.+ +|+.+...++.+.+....+ ..+.||.||+|+-
T Consensus 70 gv~~~~~-~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG 110 (409)
T 3h8l_A 70 GIQFQEG-TVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIG 110 (409)
T ss_dssp TCEEEEC-EEEEEETTTTEEEEECTTSCEEEEECSEEEECCC
T ss_pred CeEEEEe-eEEEEeCCCCEEEEccCCcccceeeCCEEEECCC
Confidence 3677777 8888887766555543221 2378999999864
No 204
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=54.77 E-value=13 Score=33.35 Aligned_cols=40 Identities=13% Similarity=0.214 Sum_probs=31.2
Q ss_pred ceeeecCceeeEEEEeCCeEEEEe-CCce--eeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRE-NVKP--RGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~-~~g~--~~~aD~VVlA~P 86 (246)
.++++++++|..|...++.+.+.. .+|. .+.||.||||+-
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG 112 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPG 112 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCC
Confidence 378889999999988877777765 3342 478999999884
No 205
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=54.51 E-value=12 Score=33.51 Aligned_cols=38 Identities=13% Similarity=0.248 Sum_probs=29.2
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++.+ +|++|.+.++. |.+++|..+.||.+|||+-+
T Consensus 70 gv~~i~~-~v~~Id~~~~~--V~~~~g~~i~YD~LViAtG~ 107 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDANT--VTTQSGKKIEYDYLVIATGP 107 (430)
T ss_dssp TEEEECS-CEEEEETTTTE--EEETTCCEEECSEEEECCCC
T ss_pred CcEEEEe-EEEEEECCCCE--EEECCCCEEECCEEEEeCCC
Confidence 4777766 69999887765 44566767899999999875
No 206
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=54.42 E-value=13 Score=33.42 Aligned_cols=40 Identities=8% Similarity=0.233 Sum_probs=31.7
Q ss_pred ceeeecCceeeEEEEeCCeEEEEe--CC-ceeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRE--NV-KPRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~--~~-g~~~~aD~VVlA~P 86 (246)
.++++++++|..|...++.+.+.. ++ +..+.||.||+|+-
T Consensus 72 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG 114 (452)
T 2cdu_A 72 GANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTG 114 (452)
T ss_dssp TCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCC
T ss_pred CCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccC
Confidence 378899999999988778888765 12 35679999999985
No 207
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=54.40 E-value=16 Score=30.67 Aligned_cols=37 Identities=16% Similarity=0.151 Sum_probs=31.2
Q ss_pred CCCEEEEcCCC--------CCCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 166 HGRAGICGNWL--------LGSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 166 ~~gL~laGDw~--------~G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
.|++|.||+-. -|+...+++.||..+|..|.+.+.+.
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLP 277 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhh
Confidence 37899999754 36789999999999999999988654
No 208
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=53.87 E-value=21 Score=31.85 Aligned_cols=37 Identities=14% Similarity=-0.062 Sum_probs=31.8
Q ss_pred CCCCEEEEcCCCCCC-------------CHHHHHHHHHHHHHHHHHHhcC
Q 043717 165 PHGRAGICGNWLLGS-------------SVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 165 ~~~gL~laGDw~~G~-------------~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
..|+||.+||-.... ....|+..|..+|+.|...+.-
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g 334 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 679999999987642 6889999999999999998853
No 209
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=53.67 E-value=13 Score=33.66 Aligned_cols=21 Identities=10% Similarity=-0.015 Sum_probs=15.0
Q ss_pred eEEEEeCCceeeccCEEEEcCC
Q 043717 65 MWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 65 ~w~l~~~~g~~~~aD~VVlA~P 86 (246)
.+.+..+ +..+.||.||||+-
T Consensus 137 ~~~v~~~-g~~~~~d~lviAtG 157 (478)
T 3dk9_A 137 KPTIEVS-GKKYTAPHILIATG 157 (478)
T ss_dssp SCEEEET-TEEEECSCEEECCC
T ss_pred eEEEEEC-CEEEEeeEEEEccC
Confidence 3566544 44689999999975
No 210
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=53.36 E-value=13 Score=37.69 Aligned_cols=37 Identities=11% Similarity=0.026 Sum_probs=31.8
Q ss_pred CCCCCEEEEcCCCCCC-CHHHHHHHHHHHHHHHHHHhc
Q 043717 164 DPHGRAGICGNWLLGS-SVESAALSGMALANHIADYLG 200 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~-~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+..|+||.+||-..+. .+-.|+..|+.+|..|...+.
T Consensus 471 Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 471 TSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999998865 788999999999999987654
No 211
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=52.94 E-value=12 Score=34.04 Aligned_cols=24 Identities=21% Similarity=0.115 Sum_probs=17.7
Q ss_pred CCeEEEEeCCc--eeeccCEEEEcCC
Q 043717 63 NGMWHLRENVK--PRGQFDVVVIAHN 86 (246)
Q Consensus 63 ~~~w~l~~~~g--~~~~aD~VVlA~P 86 (246)
.+.+.|...+| ..+.||.|||||-
T Consensus 142 ~~~~~v~~~~g~~~~~~~d~lViATG 167 (491)
T 3urh_A 142 QGKVSVTNEKGEEQVLEAKNVVIATG 167 (491)
T ss_dssp SSEEEEECTTSCEEEEECSEEEECCC
T ss_pred CCEEEEEeCCCceEEEEeCEEEEccC
Confidence 45677766554 5678999999975
No 212
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=52.74 E-value=20 Score=33.50 Aligned_cols=52 Identities=13% Similarity=-0.075 Sum_probs=37.7
Q ss_pred cceeeecCceeeEEEEeC-CeE-EEEe-CC--c--eeeccC-EEEEcCCHHHHHHhhccC
Q 043717 46 SMVSIVRPCWISNLEPFN-GMW-HLRE-NV--K--PRGQFD-VVVIAHNGKCANWLLGSS 97 (246)
Q Consensus 46 ~m~~I~l~t~V~~I~~~~-~~w-~l~~-~~--g--~~~~aD-~VVlA~Pa~~A~~LL~~~ 97 (246)
.+++|++++.|++|...+ ++. -|.. ++ | ..+.++ .||||+-+..+.+||...
T Consensus 222 ~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~S 281 (546)
T 2jbv_A 222 ENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLS 281 (546)
T ss_dssp TTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhc
Confidence 348999999999999876 432 2333 22 3 356788 999999998777887543
No 213
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=52.69 E-value=15 Score=33.21 Aligned_cols=37 Identities=8% Similarity=-0.084 Sum_probs=23.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc--eeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK--PRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g--~~~~aD~VVlA~Pa 87 (246)
+++..++.+. ...+.+.+...++ ..+.||.|||||-.
T Consensus 114 v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lvlAtG~ 152 (476)
T 3lad_A 114 VTLFEGHGKL---LAGKKVEVTAADGSSQVLDTENVILASGS 152 (476)
T ss_dssp CEEEESEEEE---CSTTCEEEECTTSCEEEECCSCEEECCCE
T ss_pred CEEEEeEEEE---ecCCEEEEEcCCCceEEEEcCEEEEcCCC
Confidence 4555555332 2345677776555 56899999999753
No 214
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=52.57 E-value=25 Score=32.08 Aligned_cols=51 Identities=14% Similarity=0.027 Sum_probs=39.4
Q ss_pred ceeeecCceeeEEEEeCCeE---EEEeCCc-eeeccCEEEEcCCHHHHHHhhccC
Q 043717 47 MVSIVRPCWISNLEPFNGMW---HLRENVK-PRGQFDVVVIAHNGKCANWLLGSS 97 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w---~l~~~~g-~~~~aD~VVlA~Pa~~A~~LL~~~ 97 (246)
++.|.+++.|..|...+++. .+...++ ..+.++.|||++-+-.+.+||--+
T Consensus 225 nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~S 279 (526)
T 3t37_A 225 NLTILTGSRVRRLKLEGNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMRS 279 (526)
T ss_dssp TEEEECSCEEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred CeEEEeCCEEEEEEecCCeEEEEEEEecCceEEEeecceEEcccccCCcchhhhc
Confidence 37899999999999887653 3333444 456789999999999999988643
No 215
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=52.55 E-value=9.8 Score=31.63 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=28.5
Q ss_pred eeeecCceeeEEEEeC--CeEEEE-eCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFN--GMWHLR-ENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~--~~w~l~-~~~g~~~~aD~VVlA~Pa 87 (246)
++++++ +|..+ ..+ +.|.+. ..++ .+.||.||+|+-.
T Consensus 77 v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 77 LKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp CEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred cEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 678888 89999 777 789852 2334 7899999999865
No 216
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=52.50 E-value=15 Score=30.87 Aligned_cols=35 Identities=9% Similarity=0.081 Sum_probs=25.1
Q ss_pred CceeeEEEEe-CCeEEEEeCCceeeccCEEEEcCCH
Q 043717 53 PCWISNLEPF-NGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 53 ~t~V~~I~~~-~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
...+..+... .+.+.+.+.++..+.||+|||||-+
T Consensus 80 ~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 80 EKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp ECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC
T ss_pred eeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC
Confidence 3445555554 4567887777778899999999864
No 217
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=52.30 E-value=15 Score=33.20 Aligned_cols=37 Identities=5% Similarity=0.128 Sum_probs=26.9
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCcee--eccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPR--GQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~--~~aD~VVlA~P 86 (246)
.+++..+ +|..+. .+.+.|...++.. +.||.||||+-
T Consensus 103 ~v~~~~g-~v~~id--~~~~~V~~~~g~~~~~~~d~lviAtG 141 (466)
T 3l8k_A 103 TLTFYKG-YVKIKD--PTHVIVKTDEGKEIEAETRYMIIASG 141 (466)
T ss_dssp TEEEESE-EEEEEE--TTEEEEEETTSCEEEEEEEEEEECCC
T ss_pred CCEEEEe-EEEEec--CCeEEEEcCCCcEEEEecCEEEECCC
Confidence 4667666 566664 4578887766656 89999999974
No 218
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=51.86 E-value=17 Score=33.04 Aligned_cols=24 Identities=13% Similarity=-0.067 Sum_probs=17.6
Q ss_pred CCeEEEEeCCc-eeeccCEEEEcCC
Q 043717 63 NGMWHLRENVK-PRGQFDVVVIAHN 86 (246)
Q Consensus 63 ~~~w~l~~~~g-~~~~aD~VVlA~P 86 (246)
.+.+.+...++ ..+.||.|||||-
T Consensus 135 ~~~v~v~~~~g~~~~~~d~lviATG 159 (483)
T 3dgh_A 135 SHTLLAKLKSGERTITAQTFVIAVG 159 (483)
T ss_dssp TTEEEEECTTCCEEEEEEEEEECCC
T ss_pred CCEEEEEeCCCeEEEEcCEEEEeCC
Confidence 45677766555 4689999999864
No 219
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=51.21 E-value=16 Score=33.41 Aligned_cols=21 Identities=19% Similarity=0.134 Sum_probs=15.4
Q ss_pred EEEEeCCceeeccCEEEEcCC
Q 043717 66 WHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 66 w~l~~~~g~~~~aD~VVlA~P 86 (246)
+.|..+++..+.||.|||||-
T Consensus 125 ~~v~~~~~~~~~~d~lViATG 145 (492)
T 3ic9_A 125 HTLQVDDHSQVIAKRIVIATG 145 (492)
T ss_dssp TEEEETTTEEEEEEEEEECCC
T ss_pred CEEEEcCCcEEEeCEEEEccC
Confidence 455555566789999999863
No 220
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=51.15 E-value=17 Score=32.81 Aligned_cols=38 Identities=5% Similarity=-0.130 Sum_probs=27.0
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCc--ee------eccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVK--PR------GQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g--~~------~~aD~VVlA~Pa 87 (246)
.++++.++.+. ...+.+.|.+.+| .. +.||.||+|+-+
T Consensus 110 gv~~~~g~~~~---~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs 155 (478)
T 1v59_A 110 KVTYYKGNGSF---EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGS 155 (478)
T ss_dssp TCEEEESEEEE---SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCE
T ss_pred CCEEEEEEEEE---ccCCeEEEEecCCCcccccccceEEeCEEEECcCC
Confidence 36788887665 2456788876544 45 789999999864
No 221
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=50.71 E-value=16 Score=35.30 Aligned_cols=41 Identities=15% Similarity=0.059 Sum_probs=32.0
Q ss_pred ceeeecCceeeEEEEeCCeE-EEEeCCceeeccCEEEEcCCHH
Q 043717 47 MVSIVRPCWISNLEPFNGMW-HLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w-~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
+++| ++++|+.|...++++ .|.+.+|..+.+|.||+|+-..
T Consensus 138 GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 138 NLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp TEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred CCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 4677 578999998877665 4767666678999999999864
No 222
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=50.69 E-value=17 Score=33.14 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=23.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCce--eeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKP--RGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~--~~~aD~VVlA~P 86 (246)
+++..++ +..+ ..+.+.|...++. .+.||.||||+-
T Consensus 120 v~~~~g~-~~~i--~~~~~~v~~~~g~~~~~~~d~lviAtG 157 (479)
T 2hqm_A 120 VDVVFGW-ARFN--KDGNVEVQKRDNTTEVYSANHILVATG 157 (479)
T ss_dssp EEEEEEE-EEEC--TTSCEEEEESSSCCEEEEEEEEEECCC
T ss_pred CEEEEeE-EEEe--eCCEEEEEeCCCcEEEEEeCEEEEcCC
Confidence 5666664 4444 2345777665554 678999999984
No 223
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.61 E-value=16 Score=32.94 Aligned_cols=37 Identities=11% Similarity=-0.068 Sum_probs=27.3
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc--eeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK--PRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g--~~~~aD~VVlA~Pa 87 (246)
+++++++.+. + ..+.|.|.+++| ..+.||.||+|+-.
T Consensus 111 v~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtGs 149 (470)
T 1dxl_A 111 VTYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATGS 149 (470)
T ss_dssp CEEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCCE
T ss_pred CEEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCCC
Confidence 6788888664 3 456788876555 57899999999753
No 224
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=49.99 E-value=9.6 Score=32.12 Aligned_cols=41 Identities=12% Similarity=-0.001 Sum_probs=30.4
Q ss_pred ceeeecCceeeEEEEeCCeE-EEEeC---------Cc-----eeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMW-HLREN---------VK-----PRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w-~l~~~---------~g-----~~~~aD~VVlA~Pa 87 (246)
.++|+++++|.+|...++++ .+... ++ ..+.+|.||+|+-.
T Consensus 134 gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~ 189 (284)
T 1rp0_A 134 NVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGH 189 (284)
T ss_dssp TEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCS
T ss_pred CCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCC
Confidence 58999999999999887654 23221 21 46789999999874
No 225
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=49.80 E-value=16 Score=32.93 Aligned_cols=20 Identities=15% Similarity=0.079 Sum_probs=14.2
Q ss_pred EEEe-CCceeeccCEEEEcCC
Q 043717 67 HLRE-NVKPRGQFDVVVIAHN 86 (246)
Q Consensus 67 ~l~~-~~g~~~~aD~VVlA~P 86 (246)
.+.. +++..+.+|.||+|+-
T Consensus 122 ~v~~~~~~~~~~~d~lviAtG 142 (463)
T 4dna_A 122 TVKLLASGKTVTAERIVIAVG 142 (463)
T ss_dssp EEEETTTTEEEEEEEEEECCC
T ss_pred EEEEecCCeEEEeCEEEEecC
Confidence 4444 3456789999999964
No 226
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=49.72 E-value=16 Score=32.87 Aligned_cols=37 Identities=14% Similarity=0.012 Sum_probs=26.5
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCc--eeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVK--PRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g--~~~~aD~VVlA~P 86 (246)
.++++.++.+. ...+.+.+.+.+| ..+.||.||+|+-
T Consensus 105 gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG 143 (464)
T 2a8x_A 105 KITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATG 143 (464)
T ss_dssp TCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCC
T ss_pred CCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCC
Confidence 36777777653 2456788877555 5789999999984
No 227
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=49.65 E-value=18 Score=33.01 Aligned_cols=36 Identities=17% Similarity=0.070 Sum_probs=29.5
Q ss_pred cCCCCCEEEEcCCCCC-C-CHHHHHHHHHHHHHHHHHH
Q 043717 163 FDPHGRAGICGNWLLG-S-SVESAALSGMALANHIADY 198 (246)
Q Consensus 163 ~~~~~gL~laGDw~~G-~-~ie~Av~SG~~aA~~l~~~ 198 (246)
.+..|+||.|||-..+ . ....|+..|..+|+.|+..
T Consensus 315 ~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 315 ATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp BCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCEEEeEEecCCCCcchhHHHHHHHHHHHHHcCC
Confidence 3567999999998743 3 7789999999999998853
No 228
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=49.00 E-value=18 Score=33.26 Aligned_cols=42 Identities=12% Similarity=-0.027 Sum_probs=31.9
Q ss_pred ceeeecCceeeEEEEeCCeE--EEEeCCceeeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEPFNGMW--HLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w--~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
+++|+.+ +|++|...++++ .|.+.+|..+.+|.||.|+-...
T Consensus 190 Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 190 GVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp CCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred CCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 5789999 599998876554 56665554689999999987653
No 229
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=48.76 E-value=18 Score=36.40 Aligned_cols=38 Identities=21% Similarity=0.122 Sum_probs=33.3
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 164 DPHGRAGICGNWLLGSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
+..|+||.+||-.....+..|+..|..+|..|...+..
T Consensus 408 ts~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 408 DAVANQHLAGAMTGRLDTASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp SCCTTEEECGGGGTCCSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEecCCchhHHHHHHHHHHHHHHHHHHcCC
Confidence 45689999999887778889999999999999987754
No 230
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=48.75 E-value=6.6 Score=35.53 Aligned_cols=31 Identities=23% Similarity=0.272 Sum_probs=24.1
Q ss_pred CCCCCEEEEcC------CCCCCCHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGN------WLLGSSVESAALSGMALANH 194 (246)
Q Consensus 164 ~~~~gL~laGD------w~~G~~ie~Av~SG~~aA~~ 194 (246)
...||||+||. +++|=.+.-||.||..|++.
T Consensus 380 k~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 380 KEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 45699999992 33334999999999988764
No 231
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=48.73 E-value=18 Score=32.02 Aligned_cols=38 Identities=8% Similarity=0.108 Sum_probs=29.4
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.+++++ ++|+.|.+.+.. |.+.++..+.||.||+||-.
T Consensus 71 ~i~~~~-~~v~~id~~~~~--v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 71 AIELIS-DRMVSIDREGRK--LLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp TEEEEC-CCEEEEETTTTE--EEESSSCEEECSEEEECCCE
T ss_pred CCEEEE-EEEEEEECCCCE--EEECCCCEEECCEEEEeeCC
Confidence 478888 999999877654 44556667899999999863
No 232
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=48.68 E-value=17 Score=33.21 Aligned_cols=38 Identities=16% Similarity=0.174 Sum_probs=28.9
Q ss_pred eeeecCceeeEEEEeCCeE-EEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMW-HLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w-~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|.. +++. .+..+ +..+++|.||+|+..
T Consensus 251 V~i~~~~~v~~i~~-~~~v~~v~~~-g~~i~~D~Vi~a~G~ 289 (490)
T 2bc0_A 251 IQLAFGETVKEVAG-NGKVEKIITD-KNEYDVDMVILAVGF 289 (490)
T ss_dssp CEEEETCCEEEEEC-SSSCCEEEES-SCEEECSEEEECCCE
T ss_pred eEEEeCCEEEEEEc-CCcEEEEEEC-CcEEECCEEEECCCC
Confidence 79999999999986 3433 34444 447899999999863
No 233
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=48.61 E-value=18 Score=32.65 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=20.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
++++.++. +.+. .+ .|.. ++..+.||.||||+-
T Consensus 108 v~~~~g~~-~~i~--~~--~v~~-~g~~~~~d~lviAtG 140 (450)
T 1ges_A 108 VDVIKGFA-RFVD--AK--TLEV-NGETITADHILIATG 140 (450)
T ss_dssp CEEEESCC-EEEE--TT--EEEE-TTEEEEEEEEEECCC
T ss_pred CEEEEeEE-EEec--CC--EEEE-CCEEEEeCEEEECCC
Confidence 56666653 3343 23 3433 345678999999985
No 234
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=48.21 E-value=18 Score=32.85 Aligned_cols=15 Identities=20% Similarity=0.200 Sum_probs=11.9
Q ss_pred CceeeccCEEEEcCC
Q 043717 72 VKPRGQFDVVVIAHN 86 (246)
Q Consensus 72 ~g~~~~aD~VVlA~P 86 (246)
++..+.+|.||+|+-
T Consensus 149 ~~~~~~~d~lviAtG 163 (484)
T 3o0h_A 149 TGERISAEKILIATG 163 (484)
T ss_dssp TCCEEEEEEEEECCC
T ss_pred CCeEEEeCEEEEccC
Confidence 455778999999974
No 235
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=47.36 E-value=28 Score=33.20 Aligned_cols=49 Identities=12% Similarity=-0.010 Sum_probs=35.8
Q ss_pred ceeeecCceeeEEEEeCC-----eEEEEe-CCc--eeeccCEEEEcCCHHHHHHhhc
Q 043717 47 MVSIVRPCWISNLEPFNG-----MWHLRE-NVK--PRGQFDVVVIAHNGKCANWLLG 95 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~-----~w~l~~-~~g--~~~~aD~VVlA~Pa~~A~~LL~ 95 (246)
+++|++++.|++|...++ ++.+.. .+| ..+.+|.||+++-+....+||.
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~ 330 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLV 330 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHH
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHH
Confidence 489999999999987643 233433 233 4678999999998777777764
No 236
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=46.85 E-value=14 Score=32.83 Aligned_cols=36 Identities=11% Similarity=0.045 Sum_probs=30.0
Q ss_pred ccCCCCCEEEEcCCCC-----CCCHHHHHHHHHHHHHHHHH
Q 043717 162 IFDPHGRAGICGNWLL-----GSSVESAALSGMALANHIAD 197 (246)
Q Consensus 162 ~~~~~~gL~laGDw~~-----G~~ie~Av~SG~~aA~~l~~ 197 (246)
+.+..|+||.+||-.. ......|+.+|+.+|+.|+.
T Consensus 253 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 253 METSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp CBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 3466799999999875 34789999999999999875
No 237
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=46.83 E-value=9.7 Score=34.82 Aligned_cols=36 Identities=8% Similarity=-0.024 Sum_probs=30.6
Q ss_pred CCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHhcC
Q 043717 166 HGRAGICGNWLLGS--SVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 166 ~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
.|+||.|||-..|+ .+..|+..|..+|+.|+..+..
T Consensus 359 ~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 58999999987665 3789999999999999887754
No 238
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=46.54 E-value=20 Score=32.74 Aligned_cols=37 Identities=11% Similarity=0.024 Sum_probs=24.7
Q ss_pred ceeeecCceeeEEEEeCCeEEEEe---CCc---eeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRE---NVK---PRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~---~~g---~~~~aD~VVlA~P 86 (246)
.++++.++ ++.+. .+.+.+.. +++ ..+.||.|||||-
T Consensus 118 gv~~~~g~-~~~i~--~~~v~v~~~~~~~g~~~~~~~~d~lviAtG 160 (490)
T 1fec_A 118 GLTFHQGF-GALQD--NHTVLVRESADPNSAVLETLDTEYILLATG 160 (490)
T ss_dssp TEEEEESE-EEEEE--TTEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred CcEEEEeE-EEEee--CCEEEEEeeccCCCCceEEEEcCEEEEeCC
Confidence 57777776 55553 34566653 234 5789999999975
No 239
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=46.02 E-value=21 Score=32.34 Aligned_cols=34 Identities=21% Similarity=0.198 Sum_probs=20.7
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
++++.++ +..+. . +.|.. ++..+.||.||||+-.
T Consensus 107 v~~~~g~-~~~i~--~--~~v~~-~g~~~~~d~lviAtGs 140 (463)
T 2r9z_A 107 ITRVDGH-ARFVD--A--HTIEV-EGQRLSADHIVIATGG 140 (463)
T ss_dssp CEEEESC-EEEEE--T--TEEEE-TTEEEEEEEEEECCCE
T ss_pred CEEEEeE-EEEcc--C--CEEEE-CCEEEEcCEEEECCCC
Confidence 5666664 33342 2 24444 3446789999999853
No 240
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=46.01 E-value=18 Score=35.10 Aligned_cols=41 Identities=12% Similarity=-0.085 Sum_probs=31.7
Q ss_pred ceeeecCceeeEEEEeCCeE-EEEeCCceeeccCEEEEcCCHH
Q 043717 47 MVSIVRPCWISNLEPFNGMW-HLRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w-~l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
+++| ++++|+.|...++++ .|.+.+|..+.+|.||+|+-..
T Consensus 139 GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 139 NLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp TEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred CCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 4677 578999998776654 5767666678999999998864
No 241
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=45.91 E-value=21 Score=32.73 Aligned_cols=37 Identities=22% Similarity=0.080 Sum_probs=22.4
Q ss_pred ceeeecCceeeEEEEeCCeEEEEe-CC-----ceeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRE-NV-----KPRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~-~~-----g~~~~aD~VVlA~P 86 (246)
.++++.++ ++.+. ...+.+.. .+ +..+.||+|||||-
T Consensus 122 gv~~~~g~-~~~i~--~~~v~v~~~~~~~~~~~~~~~~d~lViATG 164 (495)
T 2wpf_A 122 GLDFFLGW-GSLES--KNVVVVRETADPKSAVKERLQADHILLATG 164 (495)
T ss_dssp TEEEEESE-EEEEE--TTEEEEESSSSTTSCEEEEEEEEEEEECCC
T ss_pred CeEEEEeE-EEEee--CCEEEEeecCCccCCCCeEEEcCEEEEeCC
Confidence 46777775 44443 23334431 13 55688999999975
No 242
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=45.57 E-value=28 Score=33.00 Aligned_cols=43 Identities=12% Similarity=0.088 Sum_probs=32.1
Q ss_pred eeeecCceeeEEEEeCCe---EEEEe-CCce--eeccCEEEEcCCHHHH
Q 043717 48 VSIVRPCWISNLEPFNGM---WHLRE-NVKP--RGQFDVVVIAHNGKCA 90 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~---w~l~~-~~g~--~~~aD~VVlA~Pa~~A 90 (246)
++|+++++|++|...+++ +.+.. .+|. .+.+|.||+|+-....
T Consensus 150 v~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 150 IQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp EEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred cEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 789999999999987764 33332 4553 6789999999986543
No 243
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=45.54 E-value=22 Score=33.25 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=29.3
Q ss_pred CCCCCEEEEcCCCCC-C-CHHHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWLLG-S-SVESAALSGMALANHIADY 198 (246)
Q Consensus 164 ~~~~gL~laGDw~~G-~-~ie~Av~SG~~aA~~l~~~ 198 (246)
+..|+||.+||-..+ . .+..|+..|+.+|+.|+..
T Consensus 423 ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 423 TTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp CSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhcC
Confidence 567899999998554 3 7889999999999999853
No 244
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=45.50 E-value=19 Score=32.56 Aligned_cols=37 Identities=8% Similarity=-0.183 Sum_probs=26.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc--eeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK--PRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g--~~~~aD~VVlA~Pa 87 (246)
+++++++.+. + +.+.+.|.+.+| ..+.||.||+|+-.
T Consensus 108 v~~~~g~~~~-i--~~~~~~v~~~~G~~~~~~~d~lviAtG~ 146 (468)
T 2qae_A 108 VTYYKGEGSF-E--TAHSIRVNGLDGKQEMLETKKTIIATGS 146 (468)
T ss_dssp CEEEEEEEEE-E--ETTEEEEEETTSCEEEEEEEEEEECCCE
T ss_pred CEEEEEEEEE-e--eCCEEEEEecCCceEEEEcCEEEECCCC
Confidence 6777777543 4 356788876555 57899999998853
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=45.46 E-value=15 Score=33.05 Aligned_cols=98 Identities=12% Similarity=0.048 Sum_probs=60.7
Q ss_pred eeeecCceeeEEEEeCCeE-EEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMW-HLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGV 126 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w-~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL 126 (246)
++++++++|.+|...+ +. .+..+ +..+++|.||+|+... +.. ++ +
T Consensus 204 v~i~~~~~v~~i~~~~-~v~~v~~~-g~~i~~D~Vv~a~G~~------p~~-------------------~l----~--- 249 (449)
T 3kd9_A 204 VNLRLQEITMKIEGEE-RVEKVVTD-AGEYKAELVILATGIK------PNI-------------------EL----A--- 249 (449)
T ss_dssp SEEEESCCEEEEECSS-SCCEEEET-TEEEECSEEEECSCEE------ECC-------------------HH----H---
T ss_pred cEEEeCCeEEEEeccC-cEEEEEeC-CCEEECCEEEEeeCCc------cCH-------------------HH----H---
Confidence 7899999999997655 33 34334 4478999999998631 110 11 1
Q ss_pred HHHhCCCCCCCCCCc-eeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCC------C-----CCHHHHHHHHHHHHHH
Q 043717 127 EAALGRPKGSLQKPI-YTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLL------G-----SSVESAALSGMALANH 194 (246)
Q Consensus 127 ~~llg~~~~~~~~p~-~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~------G-----~~ie~Av~SG~~aA~~ 194 (246)
+-+|+.. ... ++.+- ..+.+..|+||.+||-.. | .....|+..|+.+|+.
T Consensus 250 -~~~gl~~----~~~G~i~vd-------------~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~ 311 (449)
T 3kd9_A 250 -KQLGVRI----GETGAIWTN-------------EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSN 311 (449)
T ss_dssp -HHTTCCB----CTTSSBCCC-------------TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHH
T ss_pred -HhCCccC----CCCCCEEEC-------------CCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHH
Confidence 1223321 000 11111 122345689999999874 3 3678999999999998
Q ss_pred HHH
Q 043717 195 IAD 197 (246)
Q Consensus 195 l~~ 197 (246)
|+.
T Consensus 312 i~g 314 (449)
T 3kd9_A 312 IAG 314 (449)
T ss_dssp HTT
T ss_pred hcC
Confidence 874
No 246
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=45.45 E-value=20 Score=34.62 Aligned_cols=34 Identities=21% Similarity=0.096 Sum_probs=29.1
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 043717 165 PHGRAGICGNWLLGSSVESAALSGMALANHIADY 198 (246)
Q Consensus 165 ~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~ 198 (246)
..+|||+||+-.+..+.+.|+.+|..|+..+...
T Consensus 377 ~~~gLf~AGqi~g~~Gy~eA~a~G~~AG~naa~~ 410 (641)
T 3cp8_A 377 PVENLFFAGQINGTSGYEEAAAQGLMAGINAVRK 410 (641)
T ss_dssp SSBTEEECSGGGTBCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEEeecCCccHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999988665543
No 247
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.44 E-value=22 Score=31.95 Aligned_cols=37 Identities=16% Similarity=0.041 Sum_probs=27.5
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCc-eeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVK-PRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g-~~~~aD~VVlA~P 86 (246)
.++++.++.+. + +.+.|.|.+.+| ..+.||.||+|+-
T Consensus 105 gv~~~~g~~~~-i--d~~~v~V~~~~G~~~i~~d~lViATG 142 (455)
T 1ebd_A 105 KVEIVKGEAYF-V--DANTVRVVNGDSAQTYTFKNAIIATG 142 (455)
T ss_dssp TCEEEESEEEE-E--ETTEEEEEETTEEEEEECSEEEECCC
T ss_pred CCEEEEEEEEE-c--cCCeEEEEeCCCcEEEEeCEEEEecC
Confidence 46788888654 3 456788877666 5789999999984
No 248
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=45.24 E-value=21 Score=32.86 Aligned_cols=34 Identities=18% Similarity=0.037 Sum_probs=28.7
Q ss_pred CCCCCEEEEcCCCCC-C-CHHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWLLG-S-SVESAALSGMALANHIAD 197 (246)
Q Consensus 164 ~~~~gL~laGDw~~G-~-~ie~Av~SG~~aA~~l~~ 197 (246)
+..|+||.|||-..| . ....|+..|+.+|+.|+.
T Consensus 344 Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 344 TNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp CSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 567899999999843 3 778999999999999884
No 249
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=44.50 E-value=20 Score=32.36 Aligned_cols=37 Identities=11% Similarity=-0.165 Sum_probs=26.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCC-c-eeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENV-K-PRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~-g-~~~~aD~VVlA~Pa 87 (246)
+++++++.+ .+ +.+.|.|.+.+ + ..+.||.||+|+-.
T Consensus 112 v~~~~g~~~-~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs 150 (474)
T 1zmd_A 112 VVHVNGYGK-IT--GKNQVTATKADGGTQVIDTKNILIATGS 150 (474)
T ss_dssp CEEEESEEE-EE--ETTEEEEECTTSCEEEEEEEEEEECCCE
T ss_pred CEEEEEEEE-Ee--cCCEEEEEecCCCcEEEEeCEEEECCCC
Confidence 677777643 23 45678887754 4 56899999999863
No 250
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=43.29 E-value=16 Score=35.52 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=30.7
Q ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 043717 165 PHGRAGICGNWLLGSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 165 ~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
..++||.+||-.....+..|+.+|..+|..|...+.
T Consensus 665 ~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 665 DIKGIYLIGDAEAPRLIADATFTGHRVAREIEEANP 700 (729)
T ss_dssp TCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSCT
T ss_pred CCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhcc
Confidence 458999999988767899999999999999876543
No 251
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=43.07 E-value=22 Score=32.17 Aligned_cols=34 Identities=12% Similarity=-0.027 Sum_probs=21.5
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
.++++.++.+. + ..+.+.+ . +..+.||.|||||-
T Consensus 107 gv~~~~g~~~~-~--~~~~v~v--~-g~~~~~d~lViATG 140 (464)
T 2eq6_A 107 GVELLRGFARL-V--GPKEVEV--G-GERYGAKSLILATG 140 (464)
T ss_dssp TCEEEESCEEE-E--ETTEEEE--T-TEEEEEEEEEECCC
T ss_pred CCEEEeeeEEE-c--cCCEEEE--c-cEEEEeCEEEEcCC
Confidence 36777777543 3 2333443 4 44678999999875
No 252
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=42.98 E-value=22 Score=32.31 Aligned_cols=37 Identities=11% Similarity=-0.051 Sum_probs=24.9
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc------------eeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK------------PRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g------------~~~~aD~VVlA~Pa 87 (246)
++++.++.+. ..++.+.+...++ ..+.||.||+|+-+
T Consensus 110 v~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs 158 (482)
T 1ojt_A 110 VDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGS 158 (482)
T ss_dssp CEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCE
T ss_pred cEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCC
Confidence 6777777554 3456777764333 46789999998754
No 253
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=42.65 E-value=28 Score=31.16 Aligned_cols=35 Identities=11% Similarity=-0.043 Sum_probs=22.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
++++.++.+. + ..+.+.|.+ ++..+.||.||+|+-
T Consensus 104 v~~~~g~~~~-i--~~~~~~v~~-~g~~~~~d~lviAtG 138 (455)
T 2yqu_A 104 IARHQGTARF-L--SERKVLVEE-TGEELEARYILIATG 138 (455)
T ss_dssp CEEEESCEEE-S--SSSEEEETT-TCCEEEEEEEEECCC
T ss_pred CEEEEeEEEE-e--cCCeEEEee-CCEEEEecEEEECCC
Confidence 5677776442 2 345566654 445678999999984
No 254
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=42.53 E-value=22 Score=32.87 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=27.4
Q ss_pred CCCCEEEEcCCCCC---CCHHHHHHHHHHHHHHHHHH
Q 043717 165 PHGRAGICGNWLLG---SSVESAALSGMALANHIADY 198 (246)
Q Consensus 165 ~~~gL~laGDw~~G---~~ie~Av~SG~~aA~~l~~~ 198 (246)
.+|+||.+||-... .+-..|.+.|.-+|+.|...
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 46899999995432 38889999999999988653
No 255
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=41.21 E-value=11 Score=34.46 Aligned_cols=36 Identities=11% Similarity=0.113 Sum_probs=29.4
Q ss_pred CCCCEEEEcCCCCCC--CHHHHHHHHHHHHHHHHHHhc
Q 043717 165 PHGRAGICGNWLLGS--SVESAALSGMALANHIADYLG 200 (246)
Q Consensus 165 ~~~gL~laGDw~~G~--~ie~Av~SG~~aA~~l~~~l~ 200 (246)
..|+||.+||-..|+ .+..|+..|..+|+.|+..+.
T Consensus 350 ~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 350 GSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp TCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 468999999987666 366799999999999887653
No 256
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=41.17 E-value=25 Score=31.35 Aligned_cols=38 Identities=8% Similarity=0.084 Sum_probs=28.4
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++ ..+|+.|...++ .|.++++..+.||.||+|+-.
T Consensus 73 gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~ 110 (437)
T 3sx6_A 73 GIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGP 110 (437)
T ss_dssp TCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCC
T ss_pred CCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCC
Confidence 36776 468999987665 455566667899999999865
No 257
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=40.79 E-value=26 Score=31.84 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=29.0
Q ss_pred eeeecCceeeEEEEeC-CeEEEEeC---Cce--eeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFN-GMWHLREN---VKP--RGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~-~~w~l~~~---~g~--~~~aD~VVlA~P 86 (246)
++|+++++|.+|...+ +...+... ++. .+++|.||+|+.
T Consensus 240 v~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G 284 (488)
T 3dgz_A 240 TQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIG 284 (488)
T ss_dssp CEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSC
T ss_pred CEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEccc
Confidence 7899999999998854 44555542 243 468999999986
No 258
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=40.21 E-value=24 Score=31.80 Aligned_cols=34 Identities=18% Similarity=0.062 Sum_probs=22.2
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
.+++++++.+. + .. +.|..++ ..+.||+|||||-
T Consensus 110 gv~~~~g~~~~-~--~~--~~v~v~~-~~~~~d~lviATG 143 (458)
T 1lvl_A 110 GVKVVHGWAKV-L--DG--KQVEVDG-QRIQCEHLLLATG 143 (458)
T ss_dssp TCEEECSCEEE-E--ET--TEEEETT-EEEECSEEEECCC
T ss_pred CcEEEEEEEEE-c--cC--CEEEEee-EEEEeCEEEEeCC
Confidence 36778877654 3 23 3444444 4678999999984
No 259
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=40.15 E-value=28 Score=33.61 Aligned_cols=41 Identities=7% Similarity=0.047 Sum_probs=31.1
Q ss_pred ceeeecCceeeEEEEeCCeEE-EEeCCceeeccCEEEEcCCHH
Q 043717 47 MVSIVRPCWISNLEPFNGMWH-LRENVKPRGQFDVVVIAHNGK 88 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~-l~~~~g~~~~aD~VVlA~Pa~ 88 (246)
+++|. +.+|+.|...++++. |.+.+|..+.+|.||+|+-..
T Consensus 132 GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 132 NIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp TEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred CCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 36674 568999988877765 766666678999999998753
No 260
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=40.06 E-value=24 Score=32.20 Aligned_cols=39 Identities=13% Similarity=0.056 Sum_probs=26.4
Q ss_pred ceeeecCceeeEEEEe----CCeEEEEeCCce--eeccCEEEEcCC
Q 043717 47 MVSIVRPCWISNLEPF----NGMWHLRENVKP--RGQFDVVVIAHN 86 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~----~~~w~l~~~~g~--~~~aD~VVlA~P 86 (246)
.++++.++ +..|.+. ++.+.|..+++. .+.||.||+|+-
T Consensus 109 gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATG 153 (499)
T 1xdi_A 109 GVQVIAGR-GELIDSTPGLARHRIKATAADGSTSEHEADVVLVATG 153 (499)
T ss_dssp TCEEEESE-EEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCC
T ss_pred CCEEEEeE-EEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCC
Confidence 36777776 5555542 245777665554 678999999974
No 261
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=39.90 E-value=44 Score=30.83 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=36.6
Q ss_pred ceeeecCceeeEEEEeCCeE-EEEe-C--Cce--ee---ccCEEEEcCCHHHHHHhhcc
Q 043717 47 MVSIVRPCWISNLEPFNGMW-HLRE-N--VKP--RG---QFDVVVIAHNGKCANWLLGS 96 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w-~l~~-~--~g~--~~---~aD~VVlA~Pa~~A~~LL~~ 96 (246)
+++|++++.|++|...+++. .|.. + +|. .+ .++.||||+-+....+||..
T Consensus 210 ~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~ 268 (546)
T 1kdg_A 210 NFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQ 268 (546)
T ss_dssp TEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHH
Confidence 58999999999999876643 3433 2 242 23 68999999999887777754
No 262
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=39.60 E-value=15 Score=32.71 Aligned_cols=37 Identities=5% Similarity=0.073 Sum_probs=27.2
Q ss_pred eeeecCceeeEEEEeCCeEEEEe--CCceeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE--NVKPRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~--~~g~~~~aD~VVlA~P 86 (246)
++|+++++|.+|+. ++..+.. .++.++++|.||++++
T Consensus 215 V~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G 253 (430)
T 3h28_A 215 IDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp CEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECE
T ss_pred CEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCC
Confidence 79999999999964 3455543 1246789999999853
No 263
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=39.54 E-value=39 Score=32.67 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=27.1
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWLLGSSVESAALSGMALANHIA 196 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~ 196 (246)
....+|++|=-+-.....++++..++.+-++|.
T Consensus 564 ~~~~ni~~~~~~d~~~~fe~~v~~~~~i~~~i~ 596 (650)
T 1vg0_A 564 DLPSNVYVCSGPDSGLGNDNAVKQAETLFQQIC 596 (650)
T ss_dssp SCCTTEEEECCCCSSSSSHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEeCCCCCccCHHHHHHHHHHHHHHHc
Confidence 345679999888778899999999888888776
No 264
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=39.37 E-value=29 Score=31.21 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=26.6
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCc--eeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVK--PRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g--~~~~aD~VVlA~Pa 87 (246)
.++++.++ +..+. .+.+.|.+++| ..+.||+|||||-.
T Consensus 109 ~v~~~~g~-~~~~~--~~~~~v~~~~g~~~~~~~d~lviAtGs 148 (467)
T 1zk7_A 109 AITVVHGE-ARFKD--DQSLTVRLNEGGERVVMFDRCLVATGA 148 (467)
T ss_dssp TEEEEEEE-EEEEE--TTEEEEEETTSSEEEEECSEEEECCCE
T ss_pred CeEEEEEE-EEEcc--CCEEEEEeCCCceEEEEeCEEEEeCCC
Confidence 56777664 55553 45677776555 57899999999864
No 265
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=38.87 E-value=23 Score=33.14 Aligned_cols=36 Identities=19% Similarity=0.186 Sum_probs=27.1
Q ss_pred ceeeec--CceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVR--PCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l--~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.+++.. +++|.+|+.. + |.+++| .+++|.||+||--
T Consensus 352 nV~lv~~~~~~I~~it~~--g--v~~~dG-~~~~D~IV~ATGf 389 (545)
T 3uox_A 352 NVHLVDIREAPIQEVTPE--G--IKTADA-AYDLDVIIYATGF 389 (545)
T ss_dssp TEEEEETTTSCEEEEETT--E--EEESSC-EEECSEEEECCCC
T ss_pred CEEEEecCCCCceEEccC--e--EEeCCC-eeecCEEEECCcc
Confidence 367775 7889988753 3 445677 7899999999874
No 266
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=38.85 E-value=44 Score=32.11 Aligned_cols=42 Identities=21% Similarity=0.011 Sum_probs=30.7
Q ss_pred eeeecCceeeEEEEeCCe---EEEEe-CCce--eeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGM---WHLRE-NVKP--RGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~---w~l~~-~~g~--~~~aD~VVlA~Pa~~ 89 (246)
++|+.+++|+.|...+++ +.+.. .+|. .+.+|.||||+-...
T Consensus 173 v~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 173 VSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred CEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 789999999999877664 33332 3443 478999999988654
No 267
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=38.47 E-value=21 Score=33.34 Aligned_cols=37 Identities=19% Similarity=0.025 Sum_probs=27.4
Q ss_pred ceeeec--CceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVR--PCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l--~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.+++.. +++|.+|+.+ + |.+.+|..+++|.||+||--
T Consensus 344 nV~lv~~~~~~I~~it~~--g--v~~~dG~~~~~DvIV~ATGf 382 (540)
T 3gwf_A 344 NVEAVAIKENPIREVTAK--G--VVTEDGVLHELDVLVFATGF 382 (540)
T ss_dssp TEEEEETTTSCEEEECSS--E--EEETTCCEEECSEEEECCCB
T ss_pred CEEEEeCCCCCccEEecC--e--EEcCCCCEEECCEEEECCcc
Confidence 367765 7788888654 3 55677767899999999864
No 268
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=38.10 E-value=15 Score=34.32 Aligned_cols=34 Identities=18% Similarity=0.096 Sum_probs=26.9
Q ss_pred CCCCEEEEcCC---------CCCCCHHHHHHHHHHHHHHHHHH
Q 043717 165 PHGRAGICGNW---------LLGSSVESAALSGMALANHIADY 198 (246)
Q Consensus 165 ~~~gL~laGDw---------~~G~~ie~Av~SG~~aA~~l~~~ 198 (246)
+-||||.||+- +.|.++-.|+.+|+.|++.+.+.
T Consensus 525 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 525 VIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp EEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 45899999854 33448999999999999988754
No 269
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=37.73 E-value=16 Score=32.49 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=30.0
Q ss_pred CCCEEEEcCCC--------CCCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 166 HGRAGICGNWL--------LGSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 166 ~~gL~laGDw~--------~G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
+||||+||-.. -|+...+-+.||+.+|+.|++.|..
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~~ 336 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFDL 336 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHHh
Confidence 57999998543 4779999999999999999987753
No 270
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=37.58 E-value=44 Score=31.06 Aligned_cols=36 Identities=14% Similarity=0.061 Sum_probs=28.8
Q ss_pred CCCCCEEEEcCCC-C---------CCCHHHHHHHHHHHHHHHHHHh
Q 043717 164 DPHGRAGICGNWL-L---------GSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 164 ~~~~gL~laGDw~-~---------G~~ie~Av~SG~~aA~~l~~~l 199 (246)
+.-||||.||+-. . |.++-.|+..|+.+++.+.+.+
T Consensus 365 t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 365 TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 4568999999864 2 2378899999999999987764
No 271
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=37.36 E-value=26 Score=31.96 Aligned_cols=40 Identities=15% Similarity=0.200 Sum_probs=29.0
Q ss_pred eeeecCceeeEEEEeCCeE---EEEeCCceeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGMW---HLRENVKPRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w---~l~~~~g~~~~aD~VVlA~Pa~~ 89 (246)
++|+.+++| +|...++.+ .+..+++ .+.+|.||+|+-...
T Consensus 134 v~i~~~~~v-~l~~~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 134 IPIIEDRLV-EIRVKDGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp CCEECCCEE-EEEEETTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred CEEEECcEE-EEEEeCCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 789999999 998877654 3322334 467999999987543
No 272
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=37.26 E-value=21 Score=32.75 Aligned_cols=41 Identities=10% Similarity=-0.129 Sum_probs=31.7
Q ss_pred ceeeecCceeeEEEEeCCeEEEEe-CCc--eeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRE-NVK--PRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~-~~g--~~~~aD~VVlA~Pa 87 (246)
.+++++++.|.+|.+.++.+.+.. +++ ..+.||.||||+-+
T Consensus 174 ~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 174 NTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp TEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred CCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 478899999999988877776643 333 35789999999864
No 273
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=37.12 E-value=42 Score=31.96 Aligned_cols=38 Identities=18% Similarity=0.157 Sum_probs=28.6
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCc-eeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVK-PRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g-~~~~aD~VVlA~Pa 87 (246)
++|+++++|.+|. +++..+..+++ ..+++|.||+|+..
T Consensus 588 V~v~~~~~v~~i~--~~~v~~~~~G~~~~i~~D~Vi~a~G~ 626 (671)
T 1ps9_A 588 VKMIPGVSYQKID--DDGLHVVINGETQVLAVDNVVICAGQ 626 (671)
T ss_dssp CEEECSCEEEEEE--TTEEEEEETTEEEEECCSEEEECCCE
T ss_pred CEEEeCcEEEEEe--CCeEEEecCCeEEEEeCCEEEECCCc
Confidence 7899999999997 35566542332 57899999999864
No 274
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=36.98 E-value=28 Score=32.06 Aligned_cols=34 Identities=6% Similarity=0.069 Sum_probs=22.3
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
++++++.+|+.+.. + .|..+ +..+.||.||+|+-
T Consensus 150 v~~~~~~~v~~i~~--~--~v~~~-g~~~~~d~lViATG 183 (523)
T 1mo9_A 150 LEYILNCPAKVIDN--H--TVEAA-GKVFKAKNLILAVG 183 (523)
T ss_dssp CCEEESSCCEEEET--T--EEEET-TEEEEBSCEEECCC
T ss_pred cEEEEeeEEEEeeC--C--EEEEC-CEEEEeCEEEECCC
Confidence 56665667777653 2 34444 44678999999874
No 275
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=36.88 E-value=38 Score=31.51 Aligned_cols=43 Identities=14% Similarity=0.063 Sum_probs=30.5
Q ss_pred ceeeecCceeeEEEE-eCC------eE---EEEe-CCce--eeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEP-FNG------MW---HLRE-NVKP--RGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~-~~~------~w---~l~~-~~g~--~~~aD~VVlA~Pa~~ 89 (246)
.++|+++++|++|.. .++ +. .+.. .+|. .+.+|.||+|+-...
T Consensus 153 gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 153 NIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp TEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred CCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 489999999999987 434 32 3332 2443 678999999988654
No 276
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=36.60 E-value=47 Score=30.81 Aligned_cols=51 Identities=10% Similarity=-0.083 Sum_probs=36.1
Q ss_pred ceeeecCceeeEEEEeCC---eE-EEEe--CCce--ee---ccCEEEEcCCHHHHHHhhccC
Q 043717 47 MVSIVRPCWISNLEPFNG---MW-HLRE--NVKP--RG---QFDVVVIAHNGKCANWLLGSS 97 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~---~w-~l~~--~~g~--~~---~aD~VVlA~Pa~~A~~LL~~~ 97 (246)
+++|+++++|++|...++ +. -|.. .+|. .+ .++.||||+-+....+||...
T Consensus 208 ~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~S 269 (536)
T 1ju2_A 208 NLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLS 269 (536)
T ss_dssp TEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHT
T ss_pred CcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHc
Confidence 489999999999988753 22 2333 2342 33 468999999998888887543
No 277
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=36.36 E-value=20 Score=33.51 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=27.6
Q ss_pred CCCCEEEEcCCCC---------CCCHHHHHHHHHHHHHHHHHHh
Q 043717 165 PHGRAGICGNWLL---------GSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 165 ~~~gL~laGDw~~---------G~~ie~Av~SG~~aA~~l~~~l 199 (246)
.-||||.||+-.. |.++-.|+.+|+.|++.+.+..
T Consensus 520 ~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 520 PIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp EEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 4589999997643 3378899999999999887654
No 278
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=35.84 E-value=41 Score=31.62 Aligned_cols=36 Identities=22% Similarity=0.036 Sum_probs=30.6
Q ss_pred CCCEEEEcCCCC------CCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 166 HGRAGICGNWLL------GSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 166 ~~gL~laGDw~~------G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
.+++.|+||..+ |-++.-|+.+|..+|+.|...+..
T Consensus 346 ~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~ 387 (584)
T 2gmh_A 346 FPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTS 387 (584)
T ss_dssp ETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHc
Confidence 378999999765 559999999999999999887643
No 279
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=35.56 E-value=43 Score=31.97 Aligned_cols=42 Identities=21% Similarity=0.006 Sum_probs=30.8
Q ss_pred eeeecCceeeEEEEeCCeE---EEEe-CCc--eeeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPFNGMW---HLRE-NVK--PRGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w---~l~~-~~g--~~~~aD~VVlA~Pa~~ 89 (246)
++|+.+++|+.|...+++. .+.. .+| ..+.++.||||+-...
T Consensus 170 v~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 170 TSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp CEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred CEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 7899999999998876643 3322 344 2578999999987654
No 280
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=35.21 E-value=18 Score=27.51 Aligned_cols=18 Identities=6% Similarity=-0.023 Sum_probs=15.1
Q ss_pred eeccCEEEEcCCHHHHHH
Q 043717 75 RGQFDVVVIAHNGKCANW 92 (246)
Q Consensus 75 ~~~aD~VVlA~Pa~~A~~ 92 (246)
++.||+||+|+|......
T Consensus 5 ~~~Ad~VIvTvP~~vL~~ 22 (130)
T 2e1m_B 5 TWTGDLAIVTIPFSSLRF 22 (130)
T ss_dssp EEEESEEEECSCHHHHTT
T ss_pred EEEcCEEEEcCCHHHHhc
Confidence 568999999999988653
No 281
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=34.82 E-value=48 Score=31.08 Aligned_cols=43 Identities=9% Similarity=-0.086 Sum_probs=31.7
Q ss_pred ceeeecCceeeEEEEeCCe-E-EEEeC------Cc---------eeeccCEEEEcCCHHH
Q 043717 47 MVSIVRPCWISNLEPFNGM-W-HLREN------VK---------PRGQFDVVVIAHNGKC 89 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~-w-~l~~~------~g---------~~~~aD~VVlA~Pa~~ 89 (246)
.++|+++++|++|...+++ + .|.+. +| ..+.+|.||+|.-...
T Consensus 158 Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 158 GVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp TCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred CCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 3789999999999887643 4 36543 22 4678999999988643
No 282
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=34.55 E-value=13 Score=33.27 Aligned_cols=37 Identities=14% Similarity=-0.076 Sum_probs=29.9
Q ss_pred CCCCCEEEEcCCCCCC-------------CHHHHHHHHHHHHHHHHHHhc
Q 043717 164 DPHGRAGICGNWLLGS-------------SVESAALSGMALANHIADYLG 200 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~-------------~ie~Av~SG~~aA~~l~~~l~ 200 (246)
+.+|+||.+||-..-+ +-..|.+.|..+|+.|++.+.
T Consensus 284 t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~ 333 (430)
T 3hyw_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhc
Confidence 5568999999987422 445799999999999998885
No 283
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=33.84 E-value=17 Score=33.45 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=25.6
Q ss_pred CCCCEEEEcCCCC---------CCCHHHHHHHHHHHHHHHHH
Q 043717 165 PHGRAGICGNWLL---------GSSVESAALSGMALANHIAD 197 (246)
Q Consensus 165 ~~~gL~laGDw~~---------G~~ie~Av~SG~~aA~~l~~ 197 (246)
+-||||.||+-.. |.++-.|+.+|+.+++.+.+
T Consensus 467 ~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 467 PIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp EEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 4579999996443 33789999999999987753
No 284
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=33.41 E-value=19 Score=33.70 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=27.3
Q ss_pred CCCCEEEEcCCC---------CCCCHHHHHHHHHHHHHHHHHHh
Q 043717 165 PHGRAGICGNWL---------LGSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 165 ~~~gL~laGDw~---------~G~~ie~Av~SG~~aA~~l~~~l 199 (246)
.-||||.||+-. .|.++-.|+.+|+.+++.+.+..
T Consensus 526 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~ 569 (572)
T 1d4d_A 526 PITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFA 569 (572)
T ss_dssp EEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 357999999653 34488999999999999887543
No 285
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=32.70 E-value=68 Score=30.96 Aligned_cols=35 Identities=17% Similarity=0.003 Sum_probs=29.2
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWLLGSSVESAALSGMALANHIADY 198 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~ 198 (246)
...+|||+||.-.+..+-|.|+.+|..|+......
T Consensus 382 k~~~gLf~AGqinGttGYeEAaaqGl~AG~nAa~~ 416 (651)
T 3ces_A 382 KFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARL 416 (651)
T ss_dssp SSSBTEEECSGGGTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEecCCcChHHHHHHHHHHHHHHHHH
Confidence 45689999999998889999999999988654433
No 286
>2imh_A Hypothetical protein UNP Q5LQD5_silpo; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.57A {Silicibacter pomeroyi} SCOP: d.153.1.7
Probab=32.64 E-value=40 Score=28.35 Aligned_cols=45 Identities=20% Similarity=0.185 Sum_probs=32.7
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHHHH-----HHHHHHHHh----cCCCCCccchh
Q 043717 166 HGRAGICGNWLLGSSVESAALSGMA-----LANHIADYL----GSGGVRPEEFA 210 (246)
Q Consensus 166 ~~gL~laGDw~~G~~ie~Av~SG~~-----aA~~l~~~l----~~~~~~~~~~~ 210 (246)
.++..++||.+.|..+-.|+..++. ++++|+..| ..+|++.+...
T Consensus 112 g~~~avaGN~La~~~V~~Am~~af~~~~g~LaeRLlaAL~Ag~~AGGD~Rg~~S 165 (231)
T 2imh_A 112 FASGIASGNMLGDNSVLGAMTEAFVASDLTFERRLLAALIAAEGAGSDFRGLLS 165 (231)
T ss_dssp ETTEEEEEESCSCTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTC----CCCE
T ss_pred CCCeEEEecccCCccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCCcCCcce
Confidence 4689999999999999888888886 678888765 45666665443
No 287
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=32.52 E-value=31 Score=30.12 Aligned_cols=94 Identities=11% Similarity=-0.041 Sum_probs=59.4
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCHHHHHHhhccCChHHHHHHhhhhCCCCCHHHHHHHHHHHHH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNGKCANWLLGSSGLPQIARQMKENIPTATAEKVKKGMLEGVE 127 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa~~A~~LL~~~~~~~la~~L~~~~~~~~~eel~~~ll~eL~ 127 (246)
++|+++++|.+|. .++ +.+++|. +++|.||+|+... +.. ++ ++
T Consensus 198 V~i~~~~~v~~i~--~~~--v~~~~g~-i~~D~vi~a~G~~------p~~-------------------~l----l~--- 240 (367)
T 1xhc_A 198 VKFFLNSELLEAN--EEG--VLTNSGF-IEGKVKICAIGIV------PNV-------------------DL----AR--- 240 (367)
T ss_dssp EEEECSCCEEEEC--SSE--EEETTEE-EECSCEEEECCEE------ECC-------------------HH----HH---
T ss_pred CEEEcCCEEEEEE--eeE--EEECCCE-EEcCEEEECcCCC------cCH-------------------HH----HH---
Confidence 7899999999997 233 4556666 8999999997631 110 11 11
Q ss_pred HHhCCCCCCCCCCceeeeeecCccCCCCCCCCCCccCCCCCEEEEcCCCC--C---CCHHHHHHHHHHHHHHHHH
Q 043717 128 AALGRPKGSLQKPIYTRVHLWGAALPTNTPSIPCIFDPHGRAGICGNWLL--G---SSVESAALSGMALANHIAD 197 (246)
Q Consensus 128 ~llg~~~~~~~~p~~~~v~RW~~A~P~~~~g~~~~~~~~~gL~laGDw~~--G---~~ie~Av~SG~~aA~~l~~ 197 (246)
-+|+.. . ..+.| . ..+.+..|+||.+||-.. + .....|+.+|..+|+.|..
T Consensus 241 -~~gl~~----~-~gi~V---------d----~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 296 (367)
T 1xhc_A 241 -RSGIHT----G-RGILI---------D----DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKG 296 (367)
T ss_dssp -HTTCCB----S-SSEEC---------C----TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTT
T ss_pred -hCCCCC----C-CCEEE---------C----CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcC
Confidence 123321 0 11111 1 112345689999999863 2 3688999999999998874
No 288
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=32.44 E-value=48 Score=31.17 Aligned_cols=42 Identities=14% Similarity=0.071 Sum_probs=30.2
Q ss_pred eeeecCceeeEEEEe-CCeE---EEEe-CCce--eeccCEEEEcCCHHH
Q 043717 48 VSIVRPCWISNLEPF-NGMW---HLRE-NVKP--RGQFDVVVIAHNGKC 89 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~-~~~w---~l~~-~~g~--~~~aD~VVlA~Pa~~ 89 (246)
++|+++++|++|... ++++ .+.. .++. .+.+|.||+|+-...
T Consensus 158 v~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 158 TTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp CEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred CEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 789999999999875 4433 3322 3442 578999999998644
No 289
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=32.25 E-value=71 Score=30.10 Aligned_cols=50 Identities=12% Similarity=-0.100 Sum_probs=36.5
Q ss_pred ceeeecCceeeEEEEe--CCe---EEEEeCCc--eeecc-CEEEEcCCHHHHHHhhcc
Q 043717 47 MVSIVRPCWISNLEPF--NGM---WHLRENVK--PRGQF-DVVVIAHNGKCANWLLGS 96 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~--~~~---w~l~~~~g--~~~~a-D~VVlA~Pa~~A~~LL~~ 96 (246)
+++|.+++.|++|..+ +++ +.+...+| ..+.+ +.|||++-+-.+.+||.-
T Consensus 220 Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~ 277 (577)
T 3q9t_A 220 NITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLML 277 (577)
T ss_dssp TEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHH
Confidence 5899999999999887 443 33433324 34567 579999999998888753
No 290
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=32.21 E-value=55 Score=30.96 Aligned_cols=49 Identities=6% Similarity=0.005 Sum_probs=35.2
Q ss_pred ceeeecCceeeEEEEe----CCe---EEEEeCCc--eeeccC-EEEEcCCHHHHHHhhc
Q 043717 47 MVSIVRPCWISNLEPF----NGM---WHLRENVK--PRGQFD-VVVIAHNGKCANWLLG 95 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~----~~~---w~l~~~~g--~~~~aD-~VVlA~Pa~~A~~LL~ 95 (246)
+++|.+++.|++|..+ +++ +.+...+| .++.|+ .|||++-+-.+-+||.
T Consensus 241 NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~ 299 (583)
T 3qvp_A 241 NLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILE 299 (583)
T ss_dssp TEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred CcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHH
Confidence 4899999999999887 333 33332334 345676 6999999888888774
No 291
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=32.06 E-value=29 Score=31.16 Aligned_cols=35 Identities=6% Similarity=0.068 Sum_probs=27.8
Q ss_pred eeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~P 86 (246)
++++++++|.+++. + .+...++..+++|.||+|+.
T Consensus 203 V~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G 237 (437)
T 4eqs_A 203 IPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVG 237 (437)
T ss_dssp CCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCC
T ss_pred eEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEec
Confidence 78999999998853 2 35556677889999999976
No 292
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=31.97 E-value=45 Score=29.21 Aligned_cols=36 Identities=22% Similarity=0.237 Sum_probs=29.3
Q ss_pred CCCCEEEEcCC--------CCCCCHHHHHHHHHHHHHHHHHHhc
Q 043717 165 PHGRAGICGNW--------LLGSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 165 ~~~gL~laGDw--------~~G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
-.|+||+||-- ..|+.+.+-+.||+.+|+.|++.+.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 35789998743 3567899999999999999998763
No 293
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=31.79 E-value=36 Score=32.32 Aligned_cols=47 Identities=9% Similarity=-0.029 Sum_probs=34.1
Q ss_pred eeeecCceeeEEEEeCC----eEEEEeC------Cc--eeeccCEEEEcCCHHH-HHHhh
Q 043717 48 VSIVRPCWISNLEPFNG----MWHLREN------VK--PRGQFDVVVIAHNGKC-ANWLL 94 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~----~w~l~~~------~g--~~~~aD~VVlA~Pa~~-A~~LL 94 (246)
++|+++++|++|+..++ ++.|+.. +| .++.+|.||.|.-+.. .+++|
T Consensus 158 v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~l 217 (639)
T 2dkh_A 158 LEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAI 217 (639)
T ss_dssp CCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHT
T ss_pred cEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHh
Confidence 48999999999998753 5777542 34 4678999999987654 33444
No 294
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=31.45 E-value=62 Score=30.43 Aligned_cols=52 Identities=19% Similarity=0.104 Sum_probs=37.3
Q ss_pred cceeeecCceeeEEEEe---CC-----eEEEEeCCc---eeecc-CEEEEcCCHHHHHHhhccC
Q 043717 46 SMVSIVRPCWISNLEPF---NG-----MWHLRENVK---PRGQF-DVVVIAHNGKCANWLLGSS 97 (246)
Q Consensus 46 ~m~~I~l~t~V~~I~~~---~~-----~w~l~~~~g---~~~~a-D~VVlA~Pa~~A~~LL~~~ 97 (246)
.+++|.+++.|++|..+ ++ |+.+...++ ..+.| +.|||++-+-.+-+||.-+
T Consensus 221 ~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lS 284 (566)
T 3fim_B 221 PNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLS 284 (566)
T ss_dssp TTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHT
T ss_pred CCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhc
Confidence 35899999999999875 22 344443322 34566 6799999999999988643
No 295
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=31.34 E-value=37 Score=29.56 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=28.7
Q ss_pred ceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.++++++++|..|...+. .|..+++ .+.||.||+|+-.
T Consensus 74 ~v~~~~~~~v~~i~~~~~--~v~~~~~-~~~~d~lviAtG~ 111 (384)
T 2v3a_A 74 NARILTHTRVTGIDPGHQ--RIWIGEE-EVRYRDLVLAWGA 111 (384)
T ss_dssp TCEEECSCCCCEEEGGGT--EEEETTE-EEECSEEEECCCE
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCc-EEECCEEEEeCCC
Confidence 378899999999987543 4555554 6789999999864
No 296
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=31.32 E-value=44 Score=31.46 Aligned_cols=49 Identities=10% Similarity=-0.018 Sum_probs=34.3
Q ss_pred ceeeecCceeeEEEEeCC----e---EEEEeCCc--eeecc-CEEEEcCCHHHHHHhhc
Q 043717 47 MVSIVRPCWISNLEPFNG----M---WHLRENVK--PRGQF-DVVVIAHNGKCANWLLG 95 (246)
Q Consensus 47 m~~I~l~t~V~~I~~~~~----~---w~l~~~~g--~~~~a-D~VVlA~Pa~~A~~LL~ 95 (246)
+++|++++.|++|...++ + +.+...+| ..+.+ +.||||+-+-...+||.
T Consensus 245 nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~ 303 (587)
T 1gpe_A 245 NLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILE 303 (587)
T ss_dssp TEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHH
T ss_pred CcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHH
Confidence 489999999999987531 2 22221233 34567 89999999877777765
No 297
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=31.05 E-value=37 Score=30.36 Aligned_cols=31 Identities=6% Similarity=-0.011 Sum_probs=28.5
Q ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Q 043717 166 HGRAGICGNWLLGSSVESAALSGMALANHIA 196 (246)
Q Consensus 166 ~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~ 196 (246)
..+|++|++|..+..+|+|+.+++.+-++|.
T Consensus 397 ~~~~~~~~~~d~~~~~e~~~~~~~~~~~~~~ 427 (433)
T 1d5t_A 397 ESQVFCSCSYDATTHFETTCNDIKDIYKRMA 427 (433)
T ss_dssp TTCEEECCCCCSCSBSHHHHHHHHHHHHHHH
T ss_pred CCCEEECCCCCccccHHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999998886
No 298
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=30.82 E-value=41 Score=27.80 Aligned_cols=34 Identities=15% Similarity=0.029 Sum_probs=24.3
Q ss_pred ceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 54 CWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 54 t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
..|..+....+...+..+++..+.||+|||||-+
T Consensus 86 ~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 86 ETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp CCEEEEECSSSSEEEEETTCCEEEEEEEEECCCE
T ss_pred eEEEEeecCCCceEEEECCCeEEEEeEEEEcccc
Confidence 3456666666666666666667899999999874
No 299
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=30.68 E-value=38 Score=31.58 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=26.3
Q ss_pred ceeee--cCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 47 MVSIV--RPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 47 m~~I~--l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
.+++. ..++|.+|+. ++ |.+++| .+++|.||+||--
T Consensus 357 ~V~lvd~~~~~I~~it~--~g--v~~~dG-~~~~D~iI~ATGf 394 (549)
T 4ap3_A 357 NVELVDLRSTPIVGMDE--TG--IVTTGA-HYDLDMIVLATGF 394 (549)
T ss_dssp TEEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCE
T ss_pred CEEEEeCCCCCceEEeC--Cc--EEeCCC-ceecCEEEECCcc
Confidence 36666 3578888875 34 445677 8899999999874
No 300
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=30.56 E-value=51 Score=29.43 Aligned_cols=35 Identities=23% Similarity=0.180 Sum_probs=29.6
Q ss_pred CCCEEEEcCCC------CCCCHHHHHHHHHHHHHHHHHHhc
Q 043717 166 HGRAGICGNWL------LGSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 166 ~~gL~laGDw~------~G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
.+++.++||.. .|.++.-|+.+|..+|+.|...+.
T Consensus 281 ~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~ 321 (453)
T 3atr_A 281 WNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFE 321 (453)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 46899999975 466999999999999999987654
No 301
>2l9s_A PHD finger protein 12; protein-peptide complex, amphipathic helix motif, transcript; NMR {Homo sapiens} PDB: 2lkm_A
Probab=28.01 E-value=30 Score=21.53 Aligned_cols=24 Identities=25% Similarity=0.295 Sum_probs=17.1
Q ss_pred hhcccCC-ccccccc-ccCCCCCCCC
Q 043717 209 FAVGLHN-EFQLLEG-HDIGQFPGLE 232 (246)
Q Consensus 209 ~~~~~~~-~~~~~~~-~~~~~~~~~~ 232 (246)
++.-+|+ .|+||+- .--=+|||++
T Consensus 20 aA~~~NP~qF~LP~el~~~~~fPGs~ 45 (45)
T 2l9s_A 20 AAMERNPTQFQLPNELTCTTALPGSS 45 (45)
T ss_dssp HHHHSSCCCSSCCCSSCSSSCSSCCC
T ss_pred HHHHhChhhhcCCccccccccCCCCC
Confidence 4555677 4999988 4455799975
No 302
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=27.69 E-value=50 Score=28.69 Aligned_cols=39 Identities=13% Similarity=0.117 Sum_probs=28.2
Q ss_pred cceeeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcCCH
Q 043717 46 SMVSIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 46 ~m~~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~Pa 87 (246)
..+++..+ +|+.|.+..+.. .+.++.++.||.+|||+-.
T Consensus 68 ~gv~~i~~-~v~~id~~~~~v--~~~~g~~i~yd~LviAtG~ 106 (401)
T 3vrd_B 68 HGIQVVHD-SALGIDPDKKLV--KTAGGAEFAYDRCVVAPGI 106 (401)
T ss_dssp TTCEEECS-CEEEEETTTTEE--EETTSCEEECSEEEECCCE
T ss_pred CCCEEEEe-EEEEEEccCcEE--EecccceeecceeeeccCC
Confidence 34666654 688898776544 3466667899999999875
No 303
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=27.43 E-value=61 Score=29.50 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=27.7
Q ss_pred CCCCCEEEEcCCC----------------------------------CC-CCHHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWL----------------------------------LG-SSVESAALSGMALANHIAD 197 (246)
Q Consensus 164 ~~~~gL~laGDw~----------------------------------~G-~~ie~Av~SG~~aA~~l~~ 197 (246)
+..|+||.+||-. .. .....|+..|+.+|+.|..
T Consensus 302 t~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 302 TSVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp CSSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 4578999999987 22 2678899999999999875
No 304
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=27.38 E-value=50 Score=31.51 Aligned_cols=36 Identities=22% Similarity=0.075 Sum_probs=28.9
Q ss_pred CCCCEEEEcCCC----------CCCCHHHHHHHHHHHHHHHHHHhc
Q 043717 165 PHGRAGICGNWL----------LGSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 165 ~~~gL~laGDw~----------~G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
.-||||.||+-. .|.++-.|+..|+.+++.+.+...
T Consensus 388 ~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 433 (621)
T 2h88_A 388 VVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETCK 433 (621)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhh
Confidence 458999999842 345899999999999999887654
No 305
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=25.44 E-value=28 Score=31.30 Aligned_cols=33 Identities=6% Similarity=0.069 Sum_probs=27.0
Q ss_pred CCCCEEEEcCC--CCCCCHHHHHHHHHHHHHHHHH
Q 043717 165 PHGRAGICGNW--LLGSSVESAALSGMALANHIAD 197 (246)
Q Consensus 165 ~~~gL~laGDw--~~G~~ie~Av~SG~~aA~~l~~ 197 (246)
..++|+++|=+ +.--.+..+|.+|+.+++.++.
T Consensus 355 ~~~~v~~~GRlg~y~Y~~md~~i~~al~~~~~~~~ 389 (397)
T 3hdq_A 355 AAQDVTFVGRLATYRYYNMDQVVAQALATFRRLQG 389 (397)
T ss_dssp HCTTEEECSTTTTTCCCCHHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEcccceEEEeccHHHHHHHHHHHHHHHhc
Confidence 35799999965 3456999999999999998864
No 306
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=25.25 E-value=34 Score=30.52 Aligned_cols=37 Identities=16% Similarity=-0.013 Sum_probs=19.8
Q ss_pred eeecCceeeEEEEeCCeEEEEeCCceeeccCEEEEcC
Q 043717 49 SIVRPCWISNLEPFNGMWHLRENVKPRGQFDVVVIAH 85 (246)
Q Consensus 49 ~I~l~t~V~~I~~~~~~w~l~~~~g~~~~aD~VVlA~ 85 (246)
+|+++++|++|...+++..+...+..-...-+|.+.|
T Consensus 333 ~i~l~~~V~~I~~~~~gv~v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 333 QIVMGQRMVRLEYYDPGRDGHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp TEECSEEEEEEEECCCC-------------CCEEEEE
T ss_pred cEEecCeEEEEEECCCceEEEeCCCcCCCCCeeEEEe
Confidence 7999999999999888876654222112344666654
No 307
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=24.68 E-value=95 Score=29.74 Aligned_cols=36 Identities=22% Similarity=0.208 Sum_probs=28.3
Q ss_pred CCCCEEEEcCC-CC---------CCCHHHHHHHHHHHHHHHHHHhc
Q 043717 165 PHGRAGICGNW-LL---------GSSVESAALSGMALANHIADYLG 200 (246)
Q Consensus 165 ~~~gL~laGDw-~~---------G~~ie~Av~SG~~aA~~l~~~l~ 200 (246)
.-||||.||+- +. |.++-.|+..|+.+++.+.+...
T Consensus 384 ~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 384 KLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp SSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 56899999984 21 33788999999999998877653
No 308
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=24.22 E-value=64 Score=27.93 Aligned_cols=35 Identities=20% Similarity=0.231 Sum_probs=29.8
Q ss_pred CCEEEEcCCCC------CCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 167 GRAGICGNWLL------GSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 167 ~gL~laGDw~~------G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
.++.++||... |-++.-|+.+|..+|+.|...+..
T Consensus 286 ~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~ 326 (399)
T 2x3n_A 286 DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRD 326 (399)
T ss_dssp TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcc
Confidence 68999999864 559999999999999999876643
No 309
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=23.97 E-value=86 Score=29.26 Aligned_cols=15 Identities=13% Similarity=0.020 Sum_probs=12.0
Q ss_pred ceeeccCEEEEcCCH
Q 043717 73 KPRGQFDVVVIAHNG 87 (246)
Q Consensus 73 g~~~~aD~VVlA~Pa 87 (246)
+..+.+|++||||-.
T Consensus 181 ~~~i~a~~iiIATGs 195 (542)
T 4b1b_A 181 EETVTGKYILIATGC 195 (542)
T ss_dssp EEEEEEEEEEECCCE
T ss_pred eEEEeeeeEEeccCC
Confidence 356789999999864
No 310
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=23.19 E-value=92 Score=29.97 Aligned_cols=33 Identities=21% Similarity=0.071 Sum_probs=28.1
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWLLGSSVESAALSGMALANHIA 196 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~ 196 (246)
...+|||+||.-.+..+-|.|..+|..|+-...
T Consensus 387 k~~~gLf~AGqinGt~GyeEAaaqGl~AG~nAa 419 (637)
T 2zxi_A 387 KKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAA 419 (637)
T ss_dssp SSSBTEEECGGGGTBCSHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeecCCcchHHHHHHHHHHHHHHHH
Confidence 346899999999999999999999998885443
No 311
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=23.05 E-value=1e+02 Score=29.29 Aligned_cols=42 Identities=17% Similarity=-0.016 Sum_probs=29.7
Q ss_pred ce-eeecCceeeEEEEeCC---eEE---EEe-CCc--eeeccCEEEEcCCHH
Q 043717 47 MV-SIVRPCWISNLEPFNG---MWH---LRE-NVK--PRGQFDVVVIAHNGK 88 (246)
Q Consensus 47 m~-~I~l~t~V~~I~~~~~---~w~---l~~-~~g--~~~~aD~VVlA~Pa~ 88 (246)
.+ +|+.+++|++|...++ +.. +.. .++ ..+.++.||+|+-..
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 46 8999999999988765 432 222 334 257899999988654
No 312
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=22.95 E-value=77 Score=27.45 Aligned_cols=35 Identities=20% Similarity=0.126 Sum_probs=29.9
Q ss_pred CCEEEEcCCC------CCCCHHHHHHHHHHHHHHHHHHhcC
Q 043717 167 GRAGICGNWL------LGSSVESAALSGMALANHIADYLGS 201 (246)
Q Consensus 167 ~gL~laGDw~------~G~~ie~Av~SG~~aA~~l~~~l~~ 201 (246)
+++.+.||.. .|.++.-|+.+|..+|+.|.+.+..
T Consensus 288 ~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~ 328 (421)
T 3nix_A 288 DGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKG 328 (421)
T ss_dssp TTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcC
Confidence 6899999975 3669999999999999999887643
No 313
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=22.56 E-value=86 Score=28.23 Aligned_cols=35 Identities=9% Similarity=-0.181 Sum_probs=28.5
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWLLGSSVESAALSGMALANHIADY 198 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~~ 198 (246)
+..|+||++||-..+..+.-|-..|+.+|+.|...
T Consensus 305 t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~ 339 (464)
T 2xve_A 305 EDNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMGR 339 (464)
T ss_dssp SSSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCEEEEeCcccccchHHHHHHHHHHHHHHcCC
Confidence 45789999999777778888888888888877643
No 314
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=22.46 E-value=1.1e+02 Score=27.94 Aligned_cols=39 Identities=15% Similarity=0.335 Sum_probs=27.7
Q ss_pred eeeecCceeeEEEEeC----CeEEEE--eCCc-e--eeccCEEEEcCC
Q 043717 48 VSIVRPCWISNLEPFN----GMWHLR--ENVK-P--RGQFDVVVIAHN 86 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~----~~w~l~--~~~g-~--~~~aD~VVlA~P 86 (246)
++|+++++|.+|...+ ++..+. ..++ . .+++|.||+|+.
T Consensus 265 V~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G 312 (519)
T 3qfa_A 265 IKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIG 312 (519)
T ss_dssp CEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSC
T ss_pred CEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecC
Confidence 6899999999887643 445543 2333 2 457999999986
No 315
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=22.09 E-value=76 Score=29.12 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=25.6
Q ss_pred eeeecCceeeEEEEeCCeEEEEe------------------CCceeeccCEEEEcCCH
Q 043717 48 VSIVRPCWISNLEPFNGMWHLRE------------------NVKPRGQFDVVVIAHNG 87 (246)
Q Consensus 48 ~~I~l~t~V~~I~~~~~~w~l~~------------------~~g~~~~aD~VVlA~Pa 87 (246)
+++.. .+|++|.+..+...+.. .++..+.||.+|||+-+
T Consensus 111 v~~~~-~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs 167 (502)
T 4g6h_A 111 VTYYE-AEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGA 167 (502)
T ss_dssp EEEEE-EEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCC
T ss_pred eEEEE-EEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCc
Confidence 44443 36788877776666532 22356789999999853
No 316
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=21.84 E-value=59 Score=27.81 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=30.0
Q ss_pred CCCEEEEcCCC------CCCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 166 HGRAGICGNWL------LGSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 166 ~~gL~laGDw~------~G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
..++.|+||.. .|-+++-|+.++..+|+.|...+...
T Consensus 310 ~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~ 352 (412)
T 4hb9_A 310 SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGH 352 (412)
T ss_dssp CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 36899999975 35599999999999999988766443
No 317
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=21.48 E-value=38 Score=31.88 Aligned_cols=35 Identities=17% Similarity=0.092 Sum_probs=27.2
Q ss_pred CCCCEEEEcCCC----------CCCCHHHHHHHHHHHHHHHHHHh
Q 043717 165 PHGRAGICGNWL----------LGSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 165 ~~~gL~laGDw~----------~G~~ie~Av~SG~~aA~~l~~~l 199 (246)
.-||||.||+-. .|.++-.|+..|+.+++.+.+..
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~ 423 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI 423 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 468999999842 13378899999999998877654
No 318
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=21.43 E-value=45 Score=31.51 Aligned_cols=36 Identities=8% Similarity=0.019 Sum_probs=28.5
Q ss_pred CCCCCEEEEcCCC-C---------CCCHHHHHHHHHHHHHHHHHHh
Q 043717 164 DPHGRAGICGNWL-L---------GSSVESAALSGMALANHIADYL 199 (246)
Q Consensus 164 ~~~~gL~laGDw~-~---------G~~ie~Av~SG~~aA~~l~~~l 199 (246)
..-||||.||+-. . |.++-.|+..|+.+++.+.+..
T Consensus 370 ~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 370 TRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 3568999999853 2 2368899999999999888765
No 319
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=20.55 E-value=1e+02 Score=26.31 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=30.1
Q ss_pred CCCEEEEcCCC------CCCCHHHHHHHHHHHHHHHHHHhcCC
Q 043717 166 HGRAGICGNWL------LGSSVESAALSGMALANHIADYLGSG 202 (246)
Q Consensus 166 ~~gL~laGDw~------~G~~ie~Av~SG~~aA~~l~~~l~~~ 202 (246)
..++.++||.. .|-++.-|+.+|..+|+.|.+.+..+
T Consensus 276 ~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~ 318 (397)
T 3cgv_A 276 MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESN 318 (397)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 36899999975 35699999999999999988766443
No 320
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=20.01 E-value=80 Score=28.06 Aligned_cols=34 Identities=15% Similarity=0.037 Sum_probs=27.7
Q ss_pred CCCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHHH
Q 043717 164 DPHGRAGICGNWLLGSSVESAALSGMALANHIAD 197 (246)
Q Consensus 164 ~~~~gL~laGDw~~G~~ie~Av~SG~~aA~~l~~ 197 (246)
...|+|+++||........-|...|+.+|+.|..
T Consensus 326 ~~~p~l~~~G~~~~~~~~~~a~~qa~~~a~~~~g 359 (447)
T 2gv8_A 326 IPDPTLAFVGLALHVVPFPTSQAQAAFLARVWSG 359 (447)
T ss_dssp TTCTTEEESSCCBSSCHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcEEEEeccccccCchHHHHHHHHHHHHHcC
Confidence 3468999999988777778888899988887764
Done!