BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>043718
MPDKVTTMVLKVDLQCSKCYKKVKKVLSKFPQIQDQIYDEKQNKVTIKVVCCCPEKMRDK
ICCKGDGVIKSIEIKSPDDQKKKKEEPADKKEPEKKKETPQTEKKKEKAEESKPKNKEPA
PEKGKEKDQPEKKKEPKDTPKPKVDPQPKVDPPAPGYPPPYYPFGVCCPECYGGHGGGPC
HRYGPPPKIWYDGYYGRPVYDSWGGSSKYYGYRSDCLSEENPSACAII

High Scoring Gene Products

Symbol, full name Information P value
AT4G16380 protein from Arabidopsis thaliana 5.4e-23
AT1G51090 protein from Arabidopsis thaliana 1.2e-19
AT1G49420 protein from Arabidopsis thaliana 4.3e-18

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  043718
        (228 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1006589875 - symbol:AT4G16380 species:3702 "Ar...   192  5.4e-23   2
TAIR|locus:2026042 - symbol:AT1G51090 species:3702 "Arabi...   174  1.2e-19   2
TAIR|locus:2010192 - symbol:AT1G49420 species:3702 "Arabi...   164  4.3e-18   2


>TAIR|locus:1006589875 [details] [associations]
            symbol:AT4G16380 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
            InterPro:IPR006121 GO:GO:0009506 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0046872 EMBL:AL161543 GO:GO:0030001
            SUPFAM:SSF55008 IPI:IPI00895677 RefSeq:NP_974559.5 UniGene:At.24999
            ProteinModelPortal:B3H4A8 SMR:B3H4A8 PRIDE:B3H4A8
            EnsemblPlants:AT4G16380.1 GeneID:2745712 KEGG:ath:AT4G16380
            TAIR:At4g16380 eggNOG:NOG294964 HOGENOM:HOG000091096 OMA:DYFSEEN
            ProtClustDB:CLSN2927421 Genevestigator:B3H4A8 Uniprot:B3H4A8
        Length = 254

 Score = 192 (72.6 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 39/72 (54%), Positives = 47/72 (65%)

Query:     3 DKVTTMVLKVDLQXXXXXXXXXXXXXXFPQIQDQIYDEKQNKVTIKVVCCCPEKMRDKIC 62
             +KVT M LKVDL               FPQI+DQ++DEK N V IKVVCC PE++ DK+C
Sbjct:     7 EKVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKLC 66

Query:    63 CKGDGVIKSIEI 74
              KG G IK+IEI
Sbjct:    67 SKGGGSIKTIEI 78

 Score = 88 (36.0 bits), Expect = 5.4e-23, Sum P(2) = 5.4e-23
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:   195 YGRPVYDSWGGSSK-----Y---YGYRSDCLSEENPSACAII 228
             YGRPVY+SWGG        Y   +  R D  SEENP +C+I+
Sbjct:   213 YGRPVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 254

 Score = 42 (19.8 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query:   190 WYDGYYGRPVYDSWG 204
             +YDGY G P ++ +G
Sbjct:   191 YYDGY-GGPAFNGYG 204

 Score = 38 (18.4 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query:   198 PVYDSWGGSSKYYGY 212
             P YD +GG + + GY
Sbjct:   190 PYYDGYGGPA-FNGY 203


>TAIR|locus:2026042 [details] [associations]
            symbol:AT1G51090 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] [GO:0050832 "defense response to fungus"
            evidence=IEP] [GO:0009409 "response to cold" evidence=RCA]
            [GO:0009414 "response to water deprivation" evidence=RCA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
            InterPro:IPR006121 Pfam:PF00403 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0050832 GO:GO:0046872 GO:GO:0030001
            SUPFAM:SSF55008 EMBL:AC079828 HOGENOM:HOG000091096 EMBL:AY035097
            EMBL:AY062944 IPI:IPI00520148 PIR:B96548 RefSeq:NP_175520.1
            UniGene:At.17181 ProteinModelPortal:Q9C684 SMR:Q9C684
            EnsemblPlants:AT1G51090.1 GeneID:841532 KEGG:ath:AT1G51090
            TAIR:At1g51090 eggNOG:euNOG12392 InParanoid:Q9C684 OMA:CHEDMNS
            PhylomeDB:Q9C684 ProtClustDB:CLSN2912835 ArrayExpress:Q9C684
            Genevestigator:Q9C684 Uniprot:Q9C684
        Length = 171

 Score = 174 (66.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
 Identities = 36/74 (48%), Positives = 45/74 (60%)

Query:     1 MPDKVTTMVLKVDLQXXXXXXXXXXXXXXFPQIQDQIYDEKQNKVTIKVVCCCPEKMRDK 60
             M +KV  M LKVDL               FPQI D+++DEK N + IKVVC  PE++ +K
Sbjct:     1 MAEKVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNK 60

Query:    61 ICCKGDGVIKSIEI 74
             +C KGDG IKSI I
Sbjct:    61 LCYKGDGSIKSIVI 74

 Score = 74 (31.1 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query:   195 YGRPVYDSWGGSSKYYGYRSDCLSEENPSACAII 228
             YGRPVY+SWGG       R  C  + N   C+I+
Sbjct:   144 YGRPVYESWGGG------RQCCHEDMNSQGCSIM 171


>TAIR|locus:2010192 [details] [associations]
            symbol:AT1G49420 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] InterPro:IPR006121 EMBL:CP002684 GO:GO:0046872
            GO:GO:0030001 SUPFAM:SSF55008 IPI:IPI00527771 RefSeq:NP_175367.2
            UniGene:At.52095 ProteinModelPortal:F4I1R5
            EnsemblPlants:AT1G49420.1 GeneID:841366 KEGG:ath:AT1G49420
            OMA:NGYDERP Uniprot:F4I1R5
        Length = 189

 Score = 164 (62.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
 Identities = 34/72 (47%), Positives = 43/72 (59%)

Query:     3 DKVTTMVLKVD-LQXXXXXXXXXXXXXXFPQIQDQIYDEKQNKVTIKVVCCCPEKMRDKI 61
             +KVT M LK + L                PQ++DQ ++E+ N VTIKVVCC PEK+ DK+
Sbjct:     7 EKVTWMKLKTEPLSNEKNFSKVKKALSSIPQVRDQKFEEETNTVTIKVVCCSPEKVMDKL 66

Query:    62 CCKGDGVIKSIE 73
             C KG G IK IE
Sbjct:    67 CSKGRGAIKLIE 78

 Score = 69 (29.3 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
 Identities = 18/40 (45%), Positives = 24/40 (60%)

Query:   192 DGYYGRPVYDSWGG---SSKYYGYRSDCLSEENPSACAII 228
             +GY  RP+Y+S+GG       YG RS    EE PS C+I+
Sbjct:   152 NGYDERPIYNSYGGWQPPPSQYGGRSH-YEEEQPS-CSIM 189


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.140   0.458    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      228       104   0.00091  102 3  11 22  0.42    30
                                                     29  0.50    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  134 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.58u 0.17s 8.75t   Elapsed:  00:00:00
  Total cpu time:  8.58u 0.17s 8.75t   Elapsed:  00:00:00
  Start:  Fri May 10 14:36:13 2013   End:  Fri May 10 14:36:13 2013

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