BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043719
(183 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QN4|A Chain A, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
pdb|2QN4|B Chain B, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
Length = 200
Score = 100 bits (250), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 89/180 (49%), Gaps = 22/180 (12%)
Query: 16 PPVLDTNGQALQRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTFS 75
PPV DT G L YY+LP GGGLT+ R CPL V Q+ +G FPV F+
Sbjct: 25 PPVYDTEGHELSADGSYYVLPASPGHGGGLTMAPRVLPCPLLVAQETDERRKG-FPVRFT 83
Query: 76 PFVG----EENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFIVTGGVPG---- 127
P+ G E+ +R S D + F+A T C+QST W VG+ +P TG R +VTG + G
Sbjct: 84 PWGGAAAPEDRTIRVSTDVRIRFNAATICVQSTEWHVGD-EPLTGARRVVTGPLIGPSPS 142
Query: 128 ----FFRIDRNGTSYNLGWCPSMACPNCRLRCGFAGILIENGKRLLALDGPALPFVFKRA 183
FR+++ G Y L +CR C G+ + + L P VFK+A
Sbjct: 143 GRENAFRVEKYGGGYKLV--------SCRDSCQDLGVSRDGARAWLGASQPPHVVVFKKA 194
>pdb|1AVA|C Chain C, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|1AVA|D Chain D, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|3BX1|D Chain D, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|C Chain C, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
Length = 181
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 16 PPVLDTNGQALQRGLEYYILPEDNATGGGLTLVE-RNDSCPLYVGQKETSGSEGLFPVTF 74
PPV DT+G L+ YY+L + A GGGLT+ CPL+V Q +G FPV
Sbjct: 4 PPVHDTDGHELRADANYYVLSANRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDG-FPVRI 62
Query: 75 SPF--VGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFIVTG--------G 124
+P+ + I+R S D ++F A+TTC+QST W + +S+ GRR ++TG G
Sbjct: 63 TPYGVAPSDKIIRLSTDVRISFRAYTTCLQSTEWHI-DSELAAGRRHVITGPVKDPSPSG 121
Query: 125 VPGFFRIDRNGTSYNLGWCPSMACPNCRLRCGFAGIL--IENGKRLLALDGPALPFVFKR 182
FRI++ Y+ +C C G+ ++ G L P VFK+
Sbjct: 122 RENAFRIEK----YSGAEVHEYKLMSCGDWCQDLGVFRDLKGGAWFLGATEPYHVVVFKK 177
Query: 183 A 183
A
Sbjct: 178 A 178
>pdb|2IWT|B Chain B, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 189
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
Query: 16 PPVLDTNGQALQRGLEYYILPEDNATGGGLTLVE-RNDSCPLYVGQKETSGSEGLFPVTF 74
PPV DT+G L+ YY+L + A GGGLT+ CPL+V Q +G FPV
Sbjct: 12 PPVHDTDGHELRADANYYVLSANRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDG-FPVRI 70
Query: 75 SPF--VGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFIVTGGV 125
+P+ + I+R S D ++F A+TTC+QST W + +S+ GRR ++TG V
Sbjct: 71 TPYGVAPSDKIIRLSTDVRISFRAYTTCLQSTEWHI-DSELAAGRRHVITGPV 122
>pdb|3IIR|A Chain A, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
pdb|3IIR|B Chain B, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
Length = 190
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 89/176 (50%), Gaps = 17/176 (9%)
Query: 17 PVLDTNGQALQRGLEYYILPE-DNATGGGLTLVE-RNDSCPLYVGQKETSGSEGLFPVTF 74
P+LD NG ++ +YY++ A GGGLTL RN+ CPL V Q +G + F
Sbjct: 2 PLLDINGNVVEASRDYYLVSVIGGAGGGGLTLYRGRNELCPLDVIQLSPDLHKGT-RLRF 60
Query: 75 SPFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFIVTGGVPG------- 127
+ + +I+ E+ D V FS T+C + T WRV DP G+ FI TGGV G
Sbjct: 61 AAY-NNTSIIHEAVDLNVKFSTETSCNEPTVWRVDNYDPSRGKWFITTGGVEGNPGAQTL 119
Query: 128 --FFRIDRNGT---SYNLGWCPSMACPNCRLRCGFAGILIENGKRLLALDGPALPF 178
+F+++R GT +Y + CPS+ C +C C G+ + +RL G F
Sbjct: 120 KNWFKLERVGTDQGTYEIVHCPSV-CKSCVFLCNDVGVSYDYRRRLALTAGNERVF 174
>pdb|3S8J|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8J|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8K|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
pdb|3S8K|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
Length = 184
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 21/183 (11%)
Query: 17 PVLDTNGQALQRGLEYYILPED-NATGGGLTLVE--RNDSCPLYVGQKETSGSEGLFPVT 73
P++D +G+ + G++Y+++ A GGGLT+ CPL V Q E P+
Sbjct: 5 PIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGE---PII 61
Query: 74 FSPFVG-EENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFIVTG--GVPGF-- 128
FS ++NIVRES D V F+ C ++TAW+V G + G G GF
Sbjct: 62 FSAIKNVKDNIVRESVDLNVKFNITINCNETTAWKVDRFPGVIGWTVTLGGEKGYHGFES 121
Query: 129 ----FRIDRNGT--SYNLGWCPSMACPNCRLR-CGFAGILIENGK-RLLALDGPALPFVF 180
F+I + G SY +CPS P RL C I + + R L L A FVF
Sbjct: 122 THSMFKIKKAGLPFSYKFHFCPSY--PRTRLIPCNNVDIFFDKYRIRRLILTNDAKEFVF 179
Query: 181 KRA 183
+
Sbjct: 180 IKT 182
>pdb|2DRE|A Chain A, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|B Chain B, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|C Chain C, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|D Chain D, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
Length = 180
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 17 PVLDTNGQALQRGLEYYILPEDNATGGGLTL--VERNDSCPLYVGQKETSGSEGLFPVTF 74
PV DTNG L+ Y+I P + GGGL V+ + CPL + + GL PVT
Sbjct: 6 PVKDTNGNPLKIETRYFIQPASDNNGGGLVPANVDLSHLCPLGIVRTSLPYQPGL-PVTI 64
Query: 75 S-PFVGEENIVRESHDFIVTFSA-FTTCIQSTAWRVGESDPKTGRRFIVTGGVP----GF 128
S P E N V + + +TF A C S W V D + ++I+TGG P F
Sbjct: 65 STPSSSEGNDVLTNTNIAITFDAPIWLCPSSKTWTV---DSSSEEKYIITGGDPKSGESF 121
Query: 129 FRIDRNGTSYN 139
FRI++ G N
Sbjct: 122 FRIEKYGNGKN 132
>pdb|1AVW|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Orthorhombic Crystal Form
pdb|1AVX|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Tetragonal Crystal Form
Length = 177
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 18 VLDTNGQALQRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTFSPF 77
VLD G L+ G YYIL + A GG N+ CPL V Q +G+ + SP+
Sbjct: 3 VLDNEGNPLENGGTYYILSDITAFGGIRAAPTGNERCPLTVVQSRNELDKGIGTIISSPY 62
Query: 78 VGEENIVRESHDFIVTFSAFTTCIQS----TAWRVGESDP-----KTGRRFIVTGGVPGF 128
+ E H + F +F + T W V E P K G + G+
Sbjct: 63 --RIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGEN---KDAMDGW 117
Query: 129 FRIDRNG----TSYNLGWCPSMACPNCRLRCGFAGILIENG---KRLLALDGPALPFVFK 181
FR++R +Y L +CP A + +CG GI I++ +RL+ L F+
Sbjct: 118 FRLERVSDDEFNNYKLVFCPQQAEDD---KCGDIGISIDHDDGTRRLVVSKNKPLVVQFQ 174
Query: 182 R 182
+
Sbjct: 175 K 175
>pdb|1BA7|A Chain A, Soybean Trypsin Inhibitor
pdb|1BA7|B Chain B, Soybean Trypsin Inhibitor
pdb|1AVU|A Chain A, Trypsin Inhibitor From Soybean (Sti)
Length = 181
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 24/181 (13%)
Query: 18 VLDTNGQALQRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTFSPF 77
VLD G L+ G YYIL + A GG N+ CPL V Q +G+ + SP+
Sbjct: 3 VLDNEGNPLENGGTYYILSDITAFGGIRAAPTGNERCPLTVVQSRNELDKGIGTIISSPY 62
Query: 78 VGEENIVRESHDFIVTFSAFTTCIQS----TAWRVGESDP-----KTGRRFIVTGGVPGF 128
+ E H + F +F + T W V E P K G + G+
Sbjct: 63 --RIRFIAEGHPLSLKFDSFAVIMLCVGIPTEWSVVEDLPEGPAVKIGEN---KDAMDGW 117
Query: 129 FRIDRNG----TSYNLGWCPSMACPNCRLRCGFAGILIENG---KRLLALDGPALPFVFK 181
FR++R +Y L +CP A + +CG GI I++ +RL+ L F+
Sbjct: 118 FRLERVSDDEFNNYKLVFCPQQAEDD---KCGDIGISIDHDDGTRRLVVSKNKPLVVQFQ 174
Query: 182 R 182
+
Sbjct: 175 K 175
>pdb|3TC2|A Chain A, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|B Chain B, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|C Chain C, Crystal Structure Of Potato Serine Protease Inhibitor
Length = 187
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 10 PSDDLSPPVLDTNGQALQRGLEYYILPED-NATGGGLTLVERNDS---CPLYVGQKETSG 65
PSD + PVLD G+ L L Y I+ A GG + L + +S C V + +
Sbjct: 2 PSD--ATPVLDVTGKELDPRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDV 59
Query: 66 SEGLFPVTF---SPFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFIVT 122
PV F S G+ E + S C+ T W+VG+ D G + T
Sbjct: 60 GPSGTPVRFIGSSSHFGQGIFEDELLNIQFAISTSKMCVSYTIWKVGDYDASLGTMLLET 119
Query: 123 GGVPG-----FFRIDRNGT-SYNLGWCPSMACPNCRLRCGFAGILIENGKRLLAL--DGP 174
GG G +F+I ++ YNL +CP + + C G++ +NGKR LAL D P
Sbjct: 120 GGTIGQADSSWFKIVKSSQFGYNLLYCPVTTSSDDQF-CLKVGVVHQNGKRRLALVKDNP 178
Query: 175 ALPFVFKRA 183
L FK+
Sbjct: 179 -LDVSFKQV 186
>pdb|3E8L|C Chain C, The Crystal Structure Of The Double-Headed Arrowhead
Protease Inhibitor A In Complex With Two Trypsins
Length = 185
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 17 PVLDTNGQALQRGLE-----YYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFP 71
PV+D++G A+Q L Y I GGL+ + R D+C YV E ++ P
Sbjct: 10 PVVDSDGDAVQLNLGGNYPLYTIQSAAIGFRGGLSTL-RKDACKSYV--YEAPETDRGLP 66
Query: 72 VTFSPFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFI-VTGG----VP 126
V FS + +++ + +FS I TAW +G+S+ G F +T G +
Sbjct: 67 VGFSASATSQPVMQLGSRYKFSFSMPVPLICDTAWSIGKSETNGGISFQPITAGDYFYLN 126
Query: 127 GFFRIDRNGTS----YNLGWCPSMACPNCRLRCGFAGILIENGKRLLALDGPALPFVFKR 182
F + T Y L C +C C++ C G NG+ LL + G F++
Sbjct: 127 NFSWFEARSTEETGVYKLAAC---SCEFCKIACPEVGSFNVNGRTLLGIGGEHFTVQFQK 183
>pdb|1TIE|A Chain A, Crystal Structure Of A Kunitz-Type Trypsin Inhibitor From
Erythrina Caffra Seeds
Length = 172
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 28/180 (15%)
Query: 18 VLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEGLFPVTF-- 74
+LD NG+ +Q G YY+LP+ A GGG+ L + ++CPL V Q S+G P+
Sbjct: 2 LLDGNGEVVQNGGTYYLLPQVWAQGGGVQLAKTGEETCPLTVVQSPNELSDGK-PIRIES 60
Query: 75 ---SPFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFIVTGGVP----- 126
S F+ +++ VR + F+ C S W V E D + G ++
Sbjct: 61 RLRSAFIPDDDKVR------IGFAYAPKCAPSPWWTVVE-DEQEGLSVKLSEDESTQFDY 113
Query: 127 --GFFRIDRNGTSYNLGWCPSMACPNCRLRCGFAGILIENG--KRLLALDGPALPFVFKR 182
F ++ SY L + C +C GI + +RL+ + L V K+
Sbjct: 114 PFKFEQVSDQLHSYKL-----LYCEGKHEKCASIGINRDQKGYRRLVVTEDYPLTVVLKK 168
>pdb|1R8O|A Chain A, Crystal Structure Of An Unusual Kunitz-Type Trypsin
Inhibitor From Copaifera Langsdorffii Seeds
Length = 96
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 18 VLDTNGQALQR-GLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEGLFPVTF 74
++DT+G+ ++ G EYYILP GGGL L + + CPL V Q + S GL PV F
Sbjct: 2 LVDTDGKPIENDGAEYYILPSVRGKGGGLVLAKSGGEKCPLSVVQSPSELSNGL-PVRF 59
>pdb|2GO2|A Chain A, Crystal Structure Of Bbki, A Kunitz-Type Kallikrein
Inhibitor
Length = 163
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 18 VLDTNGQALQRGLE-YYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTF-S 75
V+DTNGQ + G + YY++P + GL L + + + GL PV F S
Sbjct: 4 VVDTNGQPVSNGADAYYLVPVSHGH-AGLALAKIGNEAEPRAVVLDPHHRPGL-PVRFES 61
Query: 76 PFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDP-KTGRRFIVTGGVPGFFRIDRN 134
P NI++ES+ + F ++ S W V + DP + T + G F++++
Sbjct: 62 PL--RINIIKESYFLNIKFGPSSS--DSGVWDVIQQDPIGLAVKVTDTKSLLGPFKVEKE 117
Query: 135 GTSYNLGWCPSMACPNCRLRCGF-AGILIENGKRLLAL-DGPALPFVFKRA 183
G Y + + P R + G G++ N K LA+ DG F ++A
Sbjct: 118 GEGYKIVYYPE------RGQTGLDIGLVHRNDKYYLAVKDGEPCVFKIRKA 162
>pdb|1R8N|A Chain A, The Crystal Structure Of The Kunitz (Sti) Type Inhibitor
From Seeds Of Delonix Regia
Length = 185
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 20/173 (11%)
Query: 18 VLDTNGQALQRGLEYYILPEDNATGGGLTLVERNDS--CPLYVGQKETSGSEGLFPVTFS 75
V D G + G EYYI+ GGG R CP+ + Q+++ GL PV FS
Sbjct: 6 VYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGL-PVRFS 64
Query: 76 PFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDPKTGRRFIVTGG---------VP 126
++ + + + F C +S+ W + + +G + GG V
Sbjct: 65 SPEEKQGKIYTDTELEIEFVEKPDCAESSKWVIVKD---SGEARVAIGGSEDHPQGELVR 121
Query: 127 GFFRIDRNGT-SYNLGWCPSMACPNCRLRCGFAGILIENGKRLLALDGPALPF 178
GFF+I++ G+ +Y L +CP + C GI E + L+ +PF
Sbjct: 122 GFFKIEKLGSLAYKLVFCPKSDSGS----CSDIGINYEGRRSLVLKSSDDVPF 170
>pdb|3QYD|A Chain A, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|C Chain C, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|B Chain B, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
Length = 181
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEGLF 70
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 6 DDL----VDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG-E 60
Query: 71 PVTF-----SPFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGES 111
P+ S F+ ++VR + F+ +C S W V +S
Sbjct: 61 PIRISSRLRSAFIPRGSLVR------LGFANPPSCAASPWWTVVDS 100
>pdb|3I2X|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
pdb|3I2X|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
Length = 187
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEGLF 70
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 6 DDL----VDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG-E 60
Query: 71 PVTFSPFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGES 111
P+ S + I R S + F+ +C S W V +S
Sbjct: 61 PIRISSRLRSAFIPRGSL-VALGFANPPSCAASPWWTVVDS 100
>pdb|1FMZ|A Chain A, Crystal Structure Of A Mutant Winged Bean Chymotrypsin
Inhibitor Protein, N14k
Length = 186
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G +++G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 5 DDL----VDAEGNLVEKGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 58
>pdb|2ESU|A Chain A, Crystal Structure Of Asn To Gln Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G +++G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 5 DDL----VDAEGNLVEQGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 58
>pdb|4AN7|B Chain B, Kunitz Type Trypsin Inhibitor Complex With Porcine Trypsin
Length = 185
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 74/179 (41%), Gaps = 21/179 (11%)
Query: 18 VLDTNGQ-ALQRGLEYYILPEDNATGGGLTLVERND-SCPLYVGQKETSGSEGLFPVTFS 75
V DT+G+ L +YYILP GGGL L +D +CPL V Q GL PV FS
Sbjct: 4 VHDTDGKPVLNNAGQYYILPAKQGKGGGLGLSNDDDGNCPLTVSQTPIDIPIGL-PVRFS 62
Query: 76 PFVGEENIVRESHDFIVTFSAFTTCIQSTA-WRV--------GESDPKTGRRFIVTGGVP 126
+I + + F+ C A WR+ G + K F + P
Sbjct: 63 SRARISHITT-ALSLNIEFTIAPACAPKPARWRIFDEQSSEKGYTPVKISDDF--SSAAP 119
Query: 127 GFFRIDRNGTSYNLGWCPSMACPNCRLRCGFAGILIENGK--RLLALDGPALPFVFKRA 183
F+I + Y L +C + +C GI I+N K RL+ +G FK+
Sbjct: 120 --FQIKKFEEDYKLVYCSKSE--SGERKCVDLGIKIDNEKNRRLVLKEGDPFKVKFKKV 174
>pdb|3I2A|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor
Protein St Wci(S)
pdb|3I2A|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor
Protein St Wci(S)
Length = 187
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEGLF 70
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 6 DDL----VDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEP 61
Query: 71 PVTFSPF 77
SP+
Sbjct: 62 IRISSPY 68
>pdb|1EYL|A Chain A, Structure Of A Recombinant Winged Bean Chymotrypsin
Inhibitor
Length = 186
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 5 DDL----VDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 58
>pdb|1XG6|A Chain A, The Crystal Structure Of The P1 Mutant (Leu To Arg)of A
Winged Bean Chymotrypsin Inhibitor(Kunitz)solved At
2.15a Resolution
Length = 187
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 6 DDL----VDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 59
>pdb|3I29|B Chain B, Crystal Structure Of A Binary Complex Between An Mutant
Tryp Inhibitor With Bovine Trypsin
Length = 187
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEGLF 70
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 6 DDL----VDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG-E 60
Query: 71 PVTFSPFVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGES 111
P+ S I R S + F+ +C S W V +S
Sbjct: 61 PIRISSQYRSLFIPRGSL-VALGFANPPSCAASPWWTVVDS 100
>pdb|2QYI|B Chain B, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|2QYI|D Chain D, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|3VEQ|A Chain A, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A
Engineered Mutant Trypsin Inhibitor
Length = 183
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 2 DDL----VDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 55
>pdb|4WBC|A Chain A, 2.13 A Structure Of A Kunitz-Type Winged Bean
Chymotrypsin Inhibitor Protein
pdb|1WBC|A Chain A, Crystallization And Preliminary X-Ray Studies Of
Psophocarpin B1, A Chymotrypsin Inhibitor From Winged
Bean Seeds
pdb|2WBC|A Chain A, Refined Crystal Structure (2.3 Angstrom) Of A Winged
Bean Chymotrypsin Inhibitor And Location Of Its Second
Reactive Site
Length = 183
Score = 33.5 bits (75), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 2 DDL----VDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 55
>pdb|2ET2|A Chain A, Crystal Structure Of An Asn To Ala Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 5 DDL----VDAEGNLVEAGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 58
>pdb|2BEB|A Chain A, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
pdb|2BEB|B Chain B, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
Length = 186
Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 5 DDL----VDAEGNLVETGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 58
>pdb|1FN0|A Chain A, Structure Of A Mutant Winged Bean Chymotrypsin Inhibitor
Protein, N14d
Length = 186
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 5 DDL----VDAEGNLVEDGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 58
>pdb|4AN6|A Chain A, Kuntiz Type Trypsin Inhibitor With Factor Xa Inhibitory
Activity
pdb|4AN6|B Chain B, Kuntiz Type Trypsin Inhibitor With Factor Xa Inhibitory
Activity
Length = 185
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 73/177 (41%), Gaps = 17/177 (9%)
Query: 18 VLDTNGQ-ALQRGLEYYILPEDNATGGGLTLVERND-SCPLYVGQKETSGSEGLFPVTFS 75
V DT+G+ L +YYILP GGGL L +D +CPL V Q GL PV FS
Sbjct: 4 VHDTDGKPVLNNAGQYYILPAKQGKGGGLGLSNDDDGNCPLTVSQTPIDLPIGL-PVRFS 62
Query: 76 PFVGEENIVRESHDFIVTFSAFTTCIQSTA-WRV-GESDPKTGRRFI-----VTGGVPGF 128
+I + + F+ C A WR+ E + G + + P
Sbjct: 63 SRARISHITT-ALSLNIEFTIAPACAPKPARWRIFNEQSSEKGYTPVKISDDFSSAAP-- 119
Query: 129 FRIDRNGTSYNLGWCPSMACPNCRLRCGFAGILI--ENGKRLLALDGPALPFVFKRA 183
F+I + Y L +C + +C GI I E +RL+ +G FK+
Sbjct: 120 FQIKKFEEDYKLVYCSKSE--SGERKCVDLGIKIDDEKNRRLVLKEGDPFKVKFKKV 174
>pdb|2BEA|A Chain A, Crystal Structure Of Asn14 To Gly Mutant Of Wci
pdb|2BEA|B Chain B, Crystal Structure Of Asn14 To Gly Mutant Of Wci
Length = 186
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 12 DDLSPPVLDTNGQALQRGLEYYILPEDNATGGGLTLVER-NDSCPLYVGQKETSGSEG 68
DDL +D G ++ G YY+LP A GGG+ + N+ CPL V + S+G
Sbjct: 5 DDL----VDAEGNLVEGGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKG 58
>pdb|2GZB|A Chain A, Bauhinia Bauhinioides Cruzipain Inhibitor (Bbci)
pdb|2GZB|B Chain B, Bauhinia Bauhinioides Cruzipain Inhibitor (Bbci)
Length = 166
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 13/166 (7%)
Query: 18 VLDTNGQALQRGLE-YYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTFSP 76
+LDT G+ + + YY++P + GGL L + + + GL +P
Sbjct: 5 ILDTKGEPVSNAADAYYLVPVSHGE-GGLALAKVGNEAEPKAVVLDPHHRPGLTVRFETP 63
Query: 77 FVGEENIVRESHDFIVTFSAFTTCIQSTAWRVGESDP-KTGRRFIVTGGVPGFFRIDRNG 135
I+ ES F + + S W V + P + T G FR+++ G
Sbjct: 64 LA--IAIITES--FFLNIKFVPSSSDSEVWDVSKQYPIGLAVKVTDTKSFVGPFRVEKEG 119
Query: 136 TSYNLGWCPSMACPNCRLRCGFAGILIENGKRLLALDGPALPFVFK 181
Y + + P + G++ N K LA PFVFK
Sbjct: 120 EGYKIVYYPDRGQTGLDI-----GLVHRNDKYYLAAT-EGEPFVFK 159
>pdb|2J6R|A Chain A, Faeg From F4ac Etec Strain Gis26, Produced In Tobacco
Plant Chloroplast
Length = 266
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 20 DTNGQALQRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEG 68
+ +G+ ++GL Y++LP NA G + V+ N S +G+ + ++G
Sbjct: 101 NNDGETNKKGLAYFVLPMKNAEGTKVGSVKVNASYAGVLGRGGVTSADG 149
>pdb|2J6R|B Chain B, Faeg From F4ac Etec Strain Gis26, Produced In Tobacco
Plant Chloroplast
Length = 266
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 22 NGQALQRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEG 68
+G+ ++GL Y++LP NA G + V+ N S +G+ + ++G
Sbjct: 103 DGETNKKGLAYFVLPMKNAEGTKVGSVKVNASYAGVLGRGGVTSADG 149
>pdb|3GGH|A Chain A, Donor Strand Complemented Faeg Of F4ad Fimbriae
pdb|3GGH|B Chain B, Donor Strand Complemented Faeg Of F4ad Fimbriae
Length = 275
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 27 QRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTFS 75
++GL Y++LP NA G + V+ N S +G+ + ++G F+
Sbjct: 93 EKGLAYFVLPMKNAEGTKVGSVKVNASYAGALGRGGVTSADGELMSLFA 141
>pdb|3GEA|A Chain A, Donor Strand Complemented Faeg Monomer Of F4 Variant Ad
pdb|3GEA|B Chain B, Donor Strand Complemented Faeg Monomer Of F4 Variant Ad
Length = 274
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 27 QRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTFS 75
++GL Y++LP NA G + V+ N S +G+ + ++G F+
Sbjct: 92 EKGLAYFVLPMKNAEGTKVGSVKVNASYAGALGRGGVTSADGELMSLFA 140
>pdb|3GEW|D Chain D, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ad Fimbriae
pdb|3GEW|A Chain A, Faee-Faeg Chaperone-Major Pilin Complex Of F4 Ad Fimbriae
Length = 253
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 27 QRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTFS 75
++GL Y++LP NA G + V+ N S +G+ + ++G F+
Sbjct: 92 EKGLAYFVLPMKNAEGTKVGSVKVNASYAGALGRGGVTSADGELMSLFA 140
>pdb|3HLR|A Chain A, Donor Strand Complemented Faeg Of F4ad Fimbriae
Length = 276
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 27 QRGLEYYILPEDNATGGGLTLVERNDSCPLYVGQKETSGSEGLFPVTFS 75
++GL Y++LP NA G + V+ N S +G+ + ++G F+
Sbjct: 84 EKGLAYFVLPMKNAEGTKVGSVKVNASYAGALGRGGVTSADGELMSLFA 132
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,036,565
Number of Sequences: 62578
Number of extensions: 259918
Number of successful extensions: 466
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 424
Number of HSP's gapped (non-prelim): 37
length of query: 183
length of database: 14,973,337
effective HSP length: 93
effective length of query: 90
effective length of database: 9,153,583
effective search space: 823822470
effective search space used: 823822470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)