Query 043720
Match_columns 1103
No_of_seqs 962 out of 7440
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 13:06:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043720.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043720hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 8.8E-76 3E-80 742.1 43.6 651 3-725 9-744 (768)
2 3rgz_A Protein brassinosteroid 100.0 6.3E-60 2.2E-64 597.1 35.2 570 94-721 61-717 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 2.7E-57 9.3E-62 568.0 46.4 564 96-732 38-634 (680)
4 4eco_A Uncharacterized protein 100.0 5.6E-57 1.9E-61 557.1 19.3 493 5-702 29-602 (636)
5 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-54 4.9E-59 553.9 39.2 498 99-731 40-570 (844)
6 4ecn_A Leucine-rich repeat pro 100.0 9.2E-55 3.2E-59 544.6 32.9 482 4-676 267-864 (876)
7 3vq2_A TLR4, TOLL-like recepto 100.0 6.5E-54 2.2E-58 530.1 32.6 526 107-732 32-569 (606)
8 3t6q_A CD180 antigen; protein- 100.0 6.6E-54 2.3E-58 530.0 32.2 528 108-732 34-571 (606)
9 1ziw_A TOLL-like receptor 3; i 100.0 8.5E-52 2.9E-56 518.2 42.7 549 97-720 17-596 (680)
10 3t6q_A CD180 antigen; protein- 100.0 2.4E-50 8.1E-55 498.2 39.8 483 94-703 44-563 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-49 5E-54 491.1 35.2 503 95-704 44-562 (606)
12 4aoj_A High affinity nerve gro 100.0 3.4E-50 1.2E-54 450.3 20.5 260 821-1102 41-321 (329)
13 4gt4_A Tyrosine-protein kinase 100.0 2.1E-50 7.3E-55 447.6 17.8 257 822-1099 27-305 (308)
14 4asz_A BDNF/NT-3 growth factor 100.0 2.5E-50 8.6E-55 445.1 17.3 258 821-1100 13-289 (299)
15 3omv_A RAF proto-oncogene seri 100.0 4.3E-49 1.5E-53 434.9 23.9 262 820-1101 35-301 (307)
16 2z81_A CD282 antigen, TOLL-lik 100.0 6.5E-49 2.2E-53 479.4 27.7 311 98-437 19-349 (549)
17 2z63_A TOLL-like receptor 4, v 100.0 7.8E-48 2.7E-52 472.2 30.3 505 97-730 20-540 (570)
18 4ase_A Vascular endothelial gr 100.0 7.3E-49 2.5E-53 443.0 15.8 271 810-1100 53-347 (353)
19 4b9d_A Serine/threonine-protei 100.0 2.1E-48 7.2E-53 435.1 19.2 252 821-1094 24-277 (350)
20 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-46 4.9E-51 480.0 37.0 498 98-722 18-540 (844)
21 4fih_A Serine/threonine-protei 100.0 1.4E-47 4.7E-52 427.8 21.0 250 821-1094 74-324 (346)
22 4g8a_A TOLL-like receptor 4; l 100.0 1.1E-46 3.9E-51 468.2 30.4 525 107-732 52-591 (635)
23 3hmm_A TGF-beta receptor type- 100.0 3.1E-47 1.1E-51 423.7 22.1 273 821-1102 3-299 (303)
24 4ecn_A Leucine-rich repeat pro 100.0 5.8E-47 2E-51 474.1 27.2 400 189-728 435-873 (876)
25 2z63_A TOLL-like receptor 4, v 100.0 2E-46 6.8E-51 459.7 31.2 482 94-705 39-536 (570)
26 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-47 4.5E-52 421.5 17.9 248 821-1092 32-283 (311)
27 4eco_A Uncharacterized protein 100.0 1.9E-47 6.5E-52 472.0 21.5 453 131-722 81-601 (636)
28 4g3f_A NF-kappa-beta-inducing 100.0 1.8E-47 6.2E-52 425.7 19.0 252 821-1099 58-315 (336)
29 3fpq_A Serine/threonine-protei 100.0 2.2E-46 7.7E-51 410.2 24.3 248 824-1094 29-283 (290)
30 2z7x_B TOLL-like receptor 1, v 100.0 1E-46 3.5E-51 456.5 23.7 458 110-729 3-489 (520)
31 3hyh_A Carbon catabolite-derep 100.0 1.2E-46 4.1E-51 408.5 21.7 247 821-1094 13-263 (275)
32 4fie_A Serine/threonine-protei 100.0 1.6E-46 5.5E-51 429.5 21.2 250 821-1094 151-401 (423)
33 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-46 3.9E-51 414.4 17.2 248 821-1093 24-281 (304)
34 4g31_A Eukaryotic translation 100.0 4.3E-45 1.5E-49 404.2 20.4 251 821-1094 5-280 (299)
35 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-44 3.6E-49 438.9 25.3 442 98-703 14-484 (520)
36 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.4E-44 1.8E-48 436.4 27.1 182 542-729 331-518 (562)
37 2z81_A CD282 antigen, TOLL-lik 100.0 9.2E-44 3.1E-48 433.9 28.5 460 94-726 37-515 (549)
38 1ogq_A PGIP-2, polygalacturona 100.0 4.1E-42 1.4E-46 386.3 24.4 268 1-309 1-277 (313)
39 3uim_A Brassinosteroid insensi 100.0 9.5E-43 3.3E-47 395.0 19.2 291 809-1099 18-310 (326)
40 4b99_A Mitogen-activated prote 100.0 2.5E-42 8.4E-47 396.7 22.0 262 821-1094 54-345 (398)
41 4f9c_A Cell division cycle 7-r 100.0 4E-42 1.4E-46 391.0 21.2 199 818-1027 18-250 (361)
42 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.4E-42 1.9E-46 418.7 23.7 485 107-726 31-546 (562)
43 2qkw_B Protein kinase; three-h 100.0 3.4E-41 1.2E-45 381.2 22.3 283 813-1101 31-316 (321)
44 3v5w_A G-protein coupled recep 100.0 2.4E-41 8.3E-46 403.0 21.9 250 821-1094 189-450 (689)
45 1jl5_A Outer protein YOPM; leu 100.0 5.8E-41 2E-45 395.8 25.0 273 101-435 5-290 (454)
46 3v47_A TOLL-like receptor 5B a 100.0 9.1E-40 3.1E-44 388.7 31.2 377 133-697 12-405 (455)
47 4g8a_A TOLL-like receptor 4; l 100.0 1.8E-39 6.2E-44 403.3 34.3 499 112-721 36-555 (635)
48 3v47_A TOLL-like receptor 5B a 100.0 6.5E-40 2.2E-44 390.0 28.3 204 107-310 30-249 (455)
49 3uto_A Twitchin; kinase, muscl 100.0 1.2E-40 4E-45 402.1 20.2 252 821-1094 157-411 (573)
50 2psq_A Fibroblast growth facto 100.0 3.9E-40 1.3E-44 379.3 21.5 259 820-1099 80-363 (370)
51 1jl5_A Outer protein YOPM; leu 100.0 1.1E-39 3.6E-44 385.0 24.2 404 129-722 9-430 (454)
52 3kul_A Ephrin type-A receptor 100.0 3E-40 1E-44 373.6 18.5 261 821-1103 49-316 (325)
53 2nru_A Interleukin-1 receptor- 100.0 5.9E-39 2E-43 360.5 28.2 283 809-1101 13-307 (307)
54 3zgw_A Maternal embryonic leuc 100.0 8.8E-40 3E-44 371.3 21.0 252 819-1094 8-261 (347)
55 4hcu_A Tyrosine-protein kinase 100.0 6.7E-40 2.3E-44 360.7 18.3 257 821-1101 10-267 (269)
56 3s95_A LIMK-1, LIM domain kina 100.0 1.6E-39 5.4E-44 365.6 21.7 259 821-1100 10-282 (310)
57 3p86_A Serine/threonine-protei 100.0 7.5E-40 2.6E-44 367.4 18.7 262 818-1101 34-299 (309)
58 2qol_A Ephrin receptor; recept 100.0 6.9E-40 2.4E-44 377.4 17.9 260 821-1102 45-311 (373)
59 3cbl_A C-FES, proto-oncogene t 100.0 3.2E-40 1.1E-44 381.4 15.2 259 820-1100 113-374 (377)
60 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.4E-39 5E-44 357.8 18.8 258 820-1101 7-265 (268)
61 3fe3_A MAP/microtubule affinit 100.0 5.3E-39 1.8E-43 362.9 23.8 249 820-1094 14-265 (328)
62 3fxz_A Serine/threonine-protei 100.0 4.8E-39 1.6E-43 358.9 23.2 251 820-1094 19-270 (297)
63 3soc_A Activin receptor type-2 100.0 3.2E-39 1.1E-43 364.9 21.5 272 820-1101 23-319 (322)
64 4eqm_A Protein kinase; transfe 100.0 7.4E-39 2.5E-43 356.9 22.7 262 821-1101 11-276 (294)
65 1qcf_A Haematopoetic cell kina 100.0 1.3E-39 4.6E-44 385.6 17.4 257 820-1100 187-444 (454)
66 3vhe_A Vascular endothelial gr 100.0 7.8E-40 2.7E-44 376.4 14.1 271 810-1100 11-355 (359)
67 3l9p_A Anaplastic lymphoma kin 100.0 1.3E-39 4.5E-44 374.6 15.8 261 821-1102 71-347 (367)
68 3gen_A Tyrosine-protein kinase 100.0 3E-39 1E-43 358.4 18.0 258 820-1101 23-281 (283)
69 1opk_A P150, C-ABL, proto-onco 100.0 3E-39 1E-43 386.1 18.7 258 821-1101 220-479 (495)
70 3tt0_A Basic fibroblast growth 100.0 5E-39 1.7E-43 372.3 19.4 260 820-1100 68-352 (382)
71 1luf_A Muscle-specific tyrosin 100.0 4.3E-39 1.5E-43 367.8 18.5 262 819-1101 45-336 (343)
72 2ivs_A Proto-oncogene tyrosine 100.0 3.5E-39 1.2E-43 363.5 17.0 261 820-1101 22-312 (314)
73 1o6l_A RAC-beta serine/threoni 100.0 2.7E-38 9.4E-43 358.0 24.3 249 821-1094 5-261 (337)
74 2c30_A Serine/threonine-protei 100.0 3.5E-38 1.2E-42 356.0 25.1 263 808-1094 22-295 (321)
75 1mp8_A Focal adhesion kinase 1 100.0 5.6E-39 1.9E-43 355.7 18.0 258 820-1100 14-276 (281)
76 3poz_A Epidermal growth factor 100.0 4.7E-39 1.6E-43 364.4 17.6 259 821-1102 15-280 (327)
77 1k9a_A Carboxyl-terminal SRC k 100.0 1.1E-38 3.6E-43 377.2 21.0 252 821-1101 193-446 (450)
78 3ugc_A Tyrosine-protein kinase 100.0 7.9E-39 2.7E-43 357.2 18.6 267 821-1101 10-292 (295)
79 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.1E-39 1.4E-43 381.0 17.0 257 821-1101 184-441 (452)
80 3q4u_A Activin receptor type-1 100.0 2.7E-38 9.4E-43 353.9 21.9 262 820-1099 7-301 (301)
81 3kmu_A ILK, integrin-linked ki 100.0 1.2E-38 4.2E-43 350.9 18.7 253 821-1100 10-270 (271)
82 4euu_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 353.5 25.5 269 821-1098 9-307 (319)
83 4dc2_A Protein kinase C IOTA t 100.0 3.2E-38 1.1E-42 363.8 22.6 258 820-1093 51-318 (396)
84 3lb7_A RAF proto-oncogene seri 100.0 6.1E-38 2.1E-42 351.7 24.2 262 820-1101 35-301 (307)
85 3t9t_A Tyrosine-protein kinase 100.0 9.5E-39 3.2E-43 351.0 17.1 257 821-1101 8-265 (267)
86 3kfa_A Tyrosine-protein kinase 100.0 6E-39 2E-43 356.9 15.5 259 819-1100 11-271 (288)
87 1t46_A HOMO sapiens V-KIT hard 100.0 8.2E-39 2.8E-43 360.4 16.4 261 820-1100 22-307 (313)
88 1rjb_A FL cytokine receptor; k 100.0 4.8E-39 1.6E-43 367.5 14.5 263 819-1101 43-335 (344)
89 2yab_A Death-associated protei 100.0 6.2E-38 2.1E-42 358.4 23.3 253 820-1094 11-273 (361)
90 3tki_A Serine/threonine-protei 100.0 6.7E-39 2.3E-43 362.1 15.1 253 821-1094 7-262 (323)
91 3a8x_A Protein kinase C IOTA t 100.0 8.3E-38 2.8E-42 355.8 23.4 257 821-1093 9-275 (345)
92 3niz_A Rhodanese family protei 100.0 2.9E-38 9.8E-43 355.1 19.2 264 820-1094 20-301 (311)
93 2i1m_A Macrophage colony-stimu 100.0 6.7E-39 2.3E-43 364.5 14.1 266 815-1100 40-326 (333)
94 3cc6_A Protein tyrosine kinase 100.0 2.9E-38 1E-42 350.0 18.8 258 820-1100 11-273 (281)
95 3dtc_A Mitogen-activated prote 100.0 1.6E-38 5.3E-43 350.2 16.4 255 820-1098 6-271 (271)
96 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.4E-38 1.2E-42 359.7 19.6 249 820-1093 22-280 (353)
97 3mdy_A Bone morphogenetic prot 100.0 2.8E-37 9.7E-42 351.7 27.0 272 817-1103 33-334 (337)
98 3qup_A Tyrosine-protein kinase 100.0 3.1E-38 1.1E-42 357.3 18.7 263 819-1102 21-300 (323)
99 3bz5_A Internalin-J, INLJ; leu 100.0 1.7E-37 5.7E-42 366.6 25.4 174 97-290 32-205 (457)
100 2pvf_A Fibroblast growth facto 100.0 2.8E-38 9.5E-43 359.4 18.0 260 820-1100 34-318 (334)
101 1mqb_A Ephrin type-A receptor 100.0 4.8E-38 1.7E-42 356.9 19.8 260 821-1102 44-311 (333)
102 3qd2_B Eukaryotic translation 100.0 2.8E-38 9.7E-43 359.1 17.8 252 820-1094 5-326 (332)
103 1fot_A TPK1 delta, CAMP-depend 100.0 1.5E-37 5E-42 349.6 23.4 246 821-1094 6-259 (318)
104 2xir_A Vascular endothelial gr 100.0 1.8E-38 6.1E-43 358.1 15.8 271 810-1100 16-310 (316)
105 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.8E-38 1.7E-42 355.6 19.4 248 820-1094 8-259 (336)
106 3kex_A Receptor tyrosine-prote 100.0 1.4E-38 4.7E-43 360.3 14.8 259 821-1102 13-278 (325)
107 3lxp_A Non-receptor tyrosine-p 100.0 9.9E-39 3.4E-43 360.3 13.4 269 823-1100 33-310 (318)
108 1p4o_A Insulin-like growth fac 100.0 1.9E-38 6.6E-43 358.9 15.7 266 814-1100 18-299 (322)
109 4aw2_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 372.6 14.2 263 814-1094 67-339 (437)
110 3v8s_A RHO-associated protein 100.0 7.1E-39 2.4E-43 371.5 12.4 259 815-1094 63-330 (410)
111 1qpc_A LCK kinase; alpha beta 100.0 1.3E-38 4.5E-43 352.3 13.9 257 820-1100 12-269 (279)
112 3lzb_A Epidermal growth factor 100.0 4E-38 1.4E-42 356.5 17.9 259 821-1102 15-280 (327)
113 4fr4_A YANK1, serine/threonine 100.0 1.5E-37 5.3E-42 357.0 22.9 250 821-1093 15-271 (384)
114 4f0f_A Serine/threonine-protei 100.0 1.3E-37 4.5E-42 345.9 21.6 253 821-1098 19-287 (287)
115 2h8h_A Proto-oncogene tyrosine 100.0 1.5E-38 5.1E-43 383.7 14.6 258 820-1101 266-524 (535)
116 3bz5_A Internalin-J, INLJ; leu 100.0 4.7E-37 1.6E-41 362.8 27.1 255 116-439 27-281 (457)
117 3soa_A Calcium/calmodulin-depe 100.0 2.2E-37 7.6E-42 363.2 24.2 255 819-1094 9-268 (444)
118 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.9E-37 6.6E-42 353.3 22.9 246 821-1094 41-294 (350)
119 4e5w_A Tyrosine-protein kinase 100.0 5.1E-38 1.7E-42 352.0 17.7 265 821-1099 21-301 (302)
120 2pmi_A Negative RE, cyclin-dep 100.0 1.5E-37 5E-42 350.5 21.3 265 820-1094 4-294 (317)
121 1ob3_A PFPK5, cell division co 100.0 1.4E-37 4.8E-42 345.7 20.7 263 821-1094 2-281 (288)
122 1u59_A Tyrosine-protein kinase 100.0 6E-38 2.1E-42 348.6 17.7 257 821-1100 9-272 (287)
123 3c1x_A Hepatocyte growth facto 100.0 5E-38 1.7E-42 361.4 17.6 258 822-1101 90-356 (373)
124 1xjd_A Protein kinase C, theta 100.0 8E-38 2.8E-42 355.2 19.0 251 818-1093 14-269 (345)
125 2a19_B Interferon-induced, dou 100.0 5.3E-38 1.8E-42 348.4 17.1 251 820-1103 10-277 (284)
126 2y0a_A Death-associated protei 100.0 1.2E-37 4.1E-42 352.4 20.1 252 821-1094 11-272 (326)
127 2i0e_A Protein kinase C-beta I 100.0 2.6E-37 9E-42 352.1 23.0 251 819-1094 18-277 (353)
128 2bdw_A Hypothetical protein K1 100.0 1.8E-37 6.1E-42 355.7 21.3 253 820-1094 28-285 (362)
129 2zv2_A Calcium/calmodulin-depe 100.0 4.6E-38 1.6E-42 351.5 16.0 251 820-1094 12-293 (298)
130 2izr_A Casein kinase I isoform 100.0 2.3E-37 7.9E-42 351.2 21.9 259 821-1099 9-280 (330)
131 3uc3_A Serine/threonine-protei 100.0 1.2E-37 4E-42 357.3 19.6 253 820-1094 19-275 (361)
132 2vd5_A DMPK protein; serine/th 100.0 3.1E-38 1.1E-42 366.3 14.9 262 814-1094 54-328 (412)
133 1tki_A Titin; serine kinase, m 100.0 9.7E-38 3.3E-42 352.1 18.4 252 820-1094 4-258 (321)
134 3o0g_A Cell division protein k 100.0 3.3E-37 1.1E-41 343.5 22.4 264 821-1094 2-283 (292)
135 3f66_A Hepatocyte growth facto 100.0 1E-37 3.6E-42 348.7 18.4 260 821-1101 25-292 (298)
136 2h34_A Serine/threonine-protei 100.0 5.8E-37 2E-41 344.3 24.3 262 820-1102 33-298 (309)
137 3pls_A Macrophage-stimulating 100.0 1.7E-37 5.8E-42 347.0 19.6 258 822-1100 22-287 (298)
138 3c0i_A Peripheral plasma membr 100.0 1.2E-37 4.1E-42 356.1 18.6 254 821-1094 24-287 (351)
139 3a62_A Ribosomal protein S6 ki 100.0 3.1E-37 1.1E-41 349.2 21.4 249 821-1094 17-277 (327)
140 3og7_A AKAP9-BRAF fusion prote 100.0 2.4E-37 8.2E-42 344.0 20.0 261 820-1100 23-288 (289)
141 3gni_B Strad alpha; kinase fol 100.0 3.8E-37 1.3E-41 357.7 22.6 268 820-1094 24-334 (389)
142 1csn_A Casein kinase-1; phosph 100.0 4.8E-37 1.6E-41 343.3 22.5 262 820-1100 9-283 (298)
143 1byg_A CSK, protein (C-termina 100.0 1E-37 3.4E-42 345.1 16.7 252 820-1100 20-273 (278)
144 2yfx_A Tyrosine-protein kinase 100.0 9.7E-38 3.3E-42 353.9 16.6 262 820-1102 29-306 (327)
145 2eva_A TAK1 kinase - TAB1 chim 100.0 1.5E-37 5E-42 348.8 17.9 254 821-1100 8-263 (307)
146 3gxj_A TGF-beta receptor type- 100.0 9.9E-39 3.4E-43 357.9 8.2 264 821-1102 3-299 (303)
147 3op5_A Serine/threonine-protei 100.0 1.6E-37 5.5E-42 357.4 18.4 268 820-1100 34-329 (364)
148 2ozo_A Tyrosine-protein kinase 100.0 1.7E-37 5.9E-42 379.6 19.6 254 823-1099 337-597 (613)
149 3dbq_A Dual specificity protei 100.0 1.3E-37 4.6E-42 355.0 17.3 253 820-1095 8-275 (343)
150 1fvr_A Tyrosine-protein kinase 100.0 2E-37 6.7E-42 351.3 18.2 258 821-1101 25-301 (327)
151 4eut_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 358.6 20.5 271 821-1100 9-309 (396)
152 3p1a_A MYT1 kinase, membrane-a 100.0 1.9E-37 6.6E-42 348.5 17.7 246 821-1094 57-305 (311)
153 3fdn_A Serine/threonine-protei 100.0 5.7E-37 1.9E-41 339.2 21.2 248 820-1094 8-258 (279)
154 1b6c_B TGF-B superfamily recep 100.0 1.4E-36 4.7E-41 346.8 24.7 271 814-1102 35-338 (342)
155 2buj_A Serine/threonine-protei 100.0 2.7E-37 9.1E-42 348.7 18.5 263 820-1102 28-308 (317)
156 3lxl_A Tyrosine-protein kinase 100.0 4.6E-38 1.6E-42 356.5 12.1 266 821-1100 23-303 (327)
157 2y94_A 5'-AMP-activated protei 100.0 6E-37 2.1E-41 361.7 21.7 248 821-1094 16-267 (476)
158 2w4o_A Calcium/calmodulin-depe 100.0 5.4E-37 1.9E-41 350.3 20.6 251 820-1094 52-306 (349)
159 2acx_A G protein-coupled recep 100.0 4.5E-37 1.6E-41 367.0 20.8 255 820-1094 183-445 (576)
160 4ejn_A RAC-alpha serine/threon 100.0 3.7E-37 1.3E-41 364.2 19.8 250 820-1094 147-405 (446)
161 2zmd_A Dual specificity protei 100.0 2.8E-37 9.7E-42 357.8 18.4 251 821-1094 56-321 (390)
162 3brb_A Proto-oncogene tyrosine 100.0 2.4E-37 8.4E-42 348.3 17.3 267 813-1100 26-308 (313)
163 2r5t_A Serine/threonine-protei 100.0 5.7E-37 2E-41 351.8 20.6 245 821-1090 38-286 (373)
164 2eue_A Carbon catabolite derep 100.0 6E-37 2.1E-41 338.2 20.0 247 821-1094 13-263 (275)
165 3g2f_A Bone morphogenetic prot 100.0 1.5E-37 5.2E-42 353.8 15.6 271 820-1100 12-318 (336)
166 3g33_A Cell division protein k 100.0 4.9E-37 1.7E-41 345.0 19.4 265 819-1094 7-297 (308)
167 3is5_A Calcium-dependent prote 100.0 8.5E-37 2.9E-41 338.8 21.1 252 821-1094 22-279 (285)
168 2yex_A Serine/threonine-protei 100.0 2.9E-37 9.8E-42 341.0 17.2 254 820-1094 6-262 (276)
169 1xbb_A Tyrosine-protein kinase 100.0 2.5E-37 8.6E-42 344.3 16.9 257 820-1100 15-279 (291)
170 1kob_A Twitchin; kinase, intra 100.0 7.6E-37 2.6E-41 352.6 21.5 253 820-1094 50-305 (387)
171 3ork_A Serine/threonine protei 100.0 2.7E-37 9.2E-42 347.5 17.2 259 820-1098 11-279 (311)
172 2wqm_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 344.6 20.0 262 820-1100 31-297 (310)
173 3hko_A Calcium/calmodulin-depe 100.0 4.6E-37 1.6E-41 351.2 19.1 262 815-1094 20-331 (345)
174 4fvq_A Tyrosine-protein kinase 100.0 5E-37 1.7E-41 341.6 18.8 251 821-1100 8-275 (289)
175 3kk8_A Calcium/calmodulin depe 100.0 1.9E-36 6.5E-41 335.9 23.3 253 820-1094 5-262 (284)
176 3llt_A Serine/threonine kinase 100.0 6.7E-37 2.3E-41 352.0 20.0 208 809-1026 23-261 (360)
177 3dls_A PAS domain-containing s 100.0 2.6E-37 8.8E-42 350.8 16.1 243 820-1094 23-275 (335)
178 2a2a_A Death-associated protei 100.0 9.5E-37 3.3E-41 344.7 20.7 253 820-1094 11-273 (321)
179 1vzo_A Ribosomal protein S6 ki 100.0 4E-37 1.4E-41 352.3 17.8 255 821-1095 54-323 (355)
180 1u5q_A Serine/threonine protei 100.0 4.7E-37 1.6E-41 350.3 18.2 249 821-1096 54-308 (348)
181 3cok_A Serine/threonine-protei 100.0 7.7E-37 2.6E-41 338.0 19.1 251 820-1094 10-263 (278)
182 2x4f_A Myosin light chain kina 100.0 1.3E-36 4.5E-41 349.8 21.1 248 825-1094 93-343 (373)
183 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-36 5.5E-41 361.7 22.5 254 821-1093 185-448 (543)
184 2v62_A Serine/threonine-protei 100.0 4.8E-37 1.7E-41 350.6 17.2 265 821-1099 37-327 (345)
185 3oz6_A Mitogen-activated prote 100.0 1.1E-36 3.9E-41 353.6 20.4 265 818-1094 6-329 (388)
186 1nxk_A MAP kinase-activated pr 100.0 1.4E-36 4.9E-41 352.9 20.7 253 821-1095 61-323 (400)
187 2w1i_A JAK2; chromosomal rearr 100.0 7.8E-37 2.7E-41 346.2 18.0 266 821-1100 41-322 (326)
188 1x8b_A WEE1HU, WEE1-like prote 100.0 7.2E-37 2.5E-41 340.0 17.3 246 820-1094 10-280 (289)
189 3a7i_A MST3 kinase, serine/thr 100.0 7.2E-37 2.5E-41 342.8 17.4 250 821-1095 22-272 (303)
190 2vwi_A Serine/threonine-protei 100.0 6.1E-37 2.1E-41 343.3 16.5 263 820-1094 14-288 (303)
191 4agu_A Cyclin-dependent kinase 100.0 2.1E-36 7.2E-41 340.4 21.0 263 821-1094 3-285 (311)
192 2w5a_A Serine/threonine-protei 100.0 2.5E-37 8.5E-42 342.1 13.1 259 820-1100 5-274 (279)
193 2ac3_A MAP kinase-interacting 100.0 8.5E-37 2.9E-41 344.4 17.7 262 821-1094 12-296 (316)
194 2jii_A Serine/threonine-protei 100.0 2.7E-37 9.4E-42 353.8 13.9 262 821-1100 42-336 (352)
195 3f3z_A Calcium/calmodulin-depe 100.0 1E-36 3.5E-41 336.8 17.7 251 820-1094 8-262 (277)
196 4hgt_A Casein kinase I isoform 100.0 1.9E-36 6.6E-41 338.0 20.2 263 819-1100 7-280 (296)
197 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.3E-36 7.8E-41 348.0 21.2 251 819-1099 63-338 (365)
198 4fl3_A Tyrosine-protein kinase 100.0 9.3E-37 3.2E-41 373.9 19.0 250 827-1100 375-631 (635)
199 1o6v_A Internalin A; bacterial 100.0 3.7E-35 1.3E-39 349.4 32.2 256 104-433 43-298 (466)
200 1u46_A ACK-1, activated CDC42 100.0 5.5E-37 1.9E-41 341.5 15.2 259 821-1101 18-285 (291)
201 3bhy_A Death-associated protei 100.0 2.3E-36 7.7E-41 335.2 20.1 257 821-1099 5-273 (283)
202 1o6v_A Internalin A; bacterial 100.0 2.2E-35 7.6E-40 351.3 30.0 356 117-677 34-389 (466)
203 3eqc_A Dual specificity mitoge 100.0 3.3E-36 1.1E-40 346.2 21.8 267 821-1094 33-325 (360)
204 3mtl_A Cell division protein k 100.0 4E-37 1.4E-41 348.1 13.8 263 821-1094 2-282 (324)
205 3ll6_A Cyclin G-associated kin 100.0 8.3E-37 2.8E-41 347.8 16.5 255 820-1100 27-308 (337)
206 3kn6_A Ribosomal protein S6 ki 100.0 8.5E-37 2.9E-41 345.2 16.4 251 826-1094 16-271 (325)
207 2vgo_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 333.7 21.0 247 821-1094 14-263 (284)
208 3uzp_A CKI-delta, CKID, casein 100.0 2.7E-36 9.1E-41 336.9 20.1 262 820-1100 8-280 (296)
209 2h6d_A 5'-AMP-activated protei 100.0 5.1E-36 1.7E-40 331.0 22.1 249 820-1094 10-262 (276)
210 2rku_A Serine/threonine-protei 100.0 3.7E-36 1.3E-40 335.4 21.0 250 820-1094 14-266 (294)
211 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-36 4.1E-41 345.8 17.2 252 820-1094 21-278 (342)
212 2r3i_A Cell division protein k 100.0 7.4E-36 2.5E-40 333.9 23.3 262 821-1094 3-284 (299)
213 2owb_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 342.0 20.6 250 820-1094 40-292 (335)
214 1t4h_A Serine/threonine-protei 100.0 1.2E-35 4.1E-40 330.5 24.5 248 822-1094 27-283 (290)
215 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.4E-36 4.7E-41 344.5 17.1 261 819-1094 32-319 (329)
216 1cm8_A Phosphorylated MAP kina 100.0 5.3E-36 1.8E-40 344.4 21.2 256 820-1094 24-308 (367)
217 3rp9_A Mitogen-activated prote 100.0 4.8E-36 1.6E-40 356.3 21.5 194 821-1020 53-280 (458)
218 2j0j_A Focal adhesion kinase 1 100.0 1.7E-36 5.9E-41 372.9 18.2 259 819-1100 388-651 (656)
219 3ttj_A Mitogen-activated prote 100.0 3E-36 1E-40 356.6 19.3 258 820-1094 61-356 (464)
220 3lm5_A Serine/threonine-protei 100.0 2.6E-36 8.7E-41 341.9 17.8 264 811-1094 18-288 (327)
221 3n9x_A Phosphotransferase; mal 100.0 4.7E-36 1.6E-40 352.8 20.7 200 820-1025 25-253 (432)
222 4aaa_A Cyclin-dependent kinase 100.0 2.7E-36 9.3E-41 342.5 18.0 265 820-1094 24-307 (331)
223 3byv_A Rhoptry kinase; malaria 100.0 3.7E-37 1.2E-41 356.1 11.0 242 820-1093 72-359 (377)
224 2jam_A Calcium/calmodulin-depe 100.0 7.5E-36 2.6E-40 334.6 21.0 251 820-1094 8-262 (304)
225 3q60_A ROP5B; pseudokinase, tr 100.0 2.1E-36 7.2E-41 349.0 17.0 253 821-1093 62-352 (371)
226 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-36 3.8E-41 345.1 14.2 257 815-1094 18-287 (326)
227 2y7j_A Phosphorylase B kinase 100.0 1.1E-35 3.7E-40 341.7 22.6 257 816-1094 89-360 (365)
228 3mwu_A Calmodulin-domain prote 100.0 1.1E-35 3.8E-40 355.6 23.3 252 820-1094 21-277 (486)
229 3i6u_A CDS1, serine/threonine- 100.0 2.3E-36 7.7E-41 353.8 16.5 255 818-1094 132-400 (419)
230 3o6n_A APL1; leucine-rich repe 100.0 3.6E-35 1.2E-39 341.4 26.4 153 567-726 226-379 (390)
231 2wtk_C Serine/threonine-protei 100.0 1.9E-35 6.6E-40 331.5 23.3 252 820-1094 4-264 (305)
232 1ua2_A CAK, cell division prot 100.0 9.1E-36 3.1E-40 340.2 20.7 263 818-1094 7-292 (346)
233 2id5_A Lingo-1, leucine rich r 100.0 1.2E-35 4.2E-40 355.2 22.8 319 206-676 14-333 (477)
234 3pfq_A PKC-B, PKC-beta, protei 100.0 9.7E-36 3.3E-40 367.4 22.4 250 819-1093 339-597 (674)
235 3com_A Serine/threonine-protei 100.0 2.5E-35 8.6E-40 332.0 23.8 252 819-1094 27-279 (314)
236 3an0_A Dual specificity mitoge 100.0 3.9E-36 1.3E-40 342.7 17.2 254 820-1094 50-311 (340)
237 3mi9_A Cell division protein k 100.0 1.7E-35 6E-40 338.9 22.5 264 821-1094 17-312 (351)
238 3nyv_A Calmodulin-domain prote 100.0 7.1E-36 2.4E-40 357.4 20.0 251 821-1094 26-282 (484)
239 2clq_A Mitogen-activated prote 100.0 8.8E-36 3E-40 332.5 19.3 252 822-1094 23-279 (295)
240 3eb0_A Putative uncharacterize 100.0 8.1E-36 2.8E-40 345.6 19.7 259 818-1094 4-322 (383)
241 1wak_A Serine/threonine-protei 100.0 8.8E-36 3E-40 347.6 20.0 264 820-1094 36-392 (397)
242 3q5i_A Protein kinase; CDPK, m 100.0 1.1E-35 3.6E-40 357.3 21.1 252 820-1094 35-302 (504)
243 3lij_A Calcium/calmodulin depe 100.0 1.6E-35 5.4E-40 354.8 22.5 251 821-1094 37-292 (494)
244 3fme_A Dual specificity mitoge 100.0 5.9E-36 2E-40 333.0 17.4 253 820-1093 6-266 (290)
245 3qyz_A Mitogen-activated prote 100.0 7.3E-36 2.5E-40 343.6 18.6 263 820-1094 26-314 (364)
246 2j7t_A Serine/threonine-protei 100.0 1.1E-35 3.6E-40 333.1 19.4 253 820-1094 18-276 (302)
247 2pml_X PFPK7, Ser/Thr protein 100.0 4.2E-36 1.4E-40 343.6 16.5 260 820-1094 30-323 (348)
248 3pg1_A Mitogen-activated prote 100.0 7.1E-36 2.4E-40 343.7 18.3 270 813-1094 14-317 (362)
249 2b9h_A MAP kinase FUS3, mitoge 100.0 1.8E-35 6E-40 339.2 20.7 263 820-1094 10-306 (353)
250 3nsz_A CK II alpha, casein kin 100.0 9.3E-36 3.2E-40 338.1 18.1 257 821-1094 36-320 (330)
251 3kvw_A DYRK2, dual specificity 100.0 1.4E-35 4.7E-40 348.0 20.0 197 820-1026 96-301 (429)
252 2xrw_A Mitogen-activated prote 100.0 2.2E-35 7.5E-40 340.3 21.2 257 821-1094 25-319 (371)
253 2id5_A Lingo-1, leucine rich r 100.0 1.3E-34 4.6E-39 346.1 28.3 178 110-291 14-191 (477)
254 1phk_A Phosphorylase kinase; g 100.0 3.6E-35 1.2E-39 328.1 21.7 254 819-1094 15-284 (298)
255 3sv0_A Casein kinase I-like; t 100.0 3.5E-35 1.2E-39 347.2 22.8 261 820-1099 6-277 (483)
256 1blx_A Cyclin-dependent kinase 100.0 2E-35 6.8E-40 334.8 19.4 265 819-1094 9-297 (326)
257 1z57_A Dual specificity protei 100.0 5.1E-35 1.7E-39 333.2 22.7 264 821-1100 14-337 (339)
258 3cek_A Dual specificity protei 100.0 1.4E-35 4.8E-40 333.9 17.1 253 819-1094 26-293 (313)
259 2fst_X Mitogen-activated prote 100.0 9.7E-36 3.3E-40 341.8 16.0 259 820-1094 28-312 (367)
260 3rgf_A Cyclin-dependent kinase 100.0 1E-35 3.5E-40 347.4 16.3 266 822-1094 21-334 (405)
261 2ycf_A Serine/threonine-protei 100.0 1.1E-35 3.7E-40 336.2 15.4 253 820-1094 9-275 (322)
262 4e7w_A Glycogen synthase kinas 100.0 2E-35 6.9E-40 343.0 18.0 259 821-1094 40-322 (394)
263 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.1E-36 1.1E-40 340.3 10.9 259 819-1101 31-303 (319)
264 1zy4_A Serine/threonine-protei 100.0 4.4E-35 1.5E-39 328.1 19.7 252 820-1094 5-284 (303)
265 3oja_B Anopheles plasmodium-re 100.0 1.4E-34 4.9E-39 355.0 26.0 150 568-724 233-383 (597)
266 2wei_A Calmodulin-domain prote 100.0 7.4E-35 2.5E-39 323.6 20.8 252 820-1094 21-277 (287)
267 3aln_A Dual specificity mitoge 100.0 4.3E-35 1.5E-39 332.1 19.2 256 821-1094 22-286 (327)
268 2i6l_A Mitogen-activated prote 100.0 5E-35 1.7E-39 330.4 19.4 259 820-1094 10-306 (320)
269 1j1b_A Glycogen synthase kinas 100.0 4.9E-35 1.7E-39 342.5 18.7 259 821-1094 54-337 (420)
270 4fcg_A Uncharacterized protein 100.0 1.6E-34 5.3E-39 326.5 21.3 268 1-310 22-311 (328)
271 3e3p_A Protein kinase, putativ 100.0 1.8E-34 6.1E-39 331.8 21.8 269 813-1094 15-315 (360)
272 3fhr_A MAP kinase-activated pr 100.0 4.5E-35 1.5E-39 332.8 16.5 253 820-1094 27-288 (336)
273 1q8y_A SR protein kinase; tran 100.0 6.6E-35 2.3E-39 337.2 17.8 263 821-1094 19-334 (373)
274 2vx3_A Dual specificity tyrosi 100.0 2.9E-34 1E-38 332.4 22.6 200 819-1026 52-260 (382)
275 4exu_A Mitogen-activated prote 100.0 8.6E-35 2.9E-39 335.3 17.7 254 821-1094 42-324 (371)
276 3a99_A Proto-oncogene serine/t 100.0 2.2E-35 7.6E-40 333.1 12.0 243 819-1094 41-294 (320)
277 2dyl_A Dual specificity mitoge 100.0 3E-34 1E-38 323.9 21.1 253 820-1094 24-284 (318)
278 2eu9_A Dual specificity protei 100.0 3.6E-34 1.2E-38 328.5 21.2 260 820-1094 18-334 (355)
279 2rio_A Serine/threonine-protei 100.0 1.5E-34 5E-39 340.1 18.1 250 822-1093 16-295 (434)
280 3qa8_A MGC80376 protein; kinas 100.0 8.1E-35 2.8E-39 350.4 15.1 268 820-1099 13-308 (676)
281 2iwi_A Serine/threonine-protei 100.0 4.8E-35 1.6E-39 329.4 11.8 245 817-1094 27-284 (312)
282 3coi_A Mitogen-activated prote 100.0 2.6E-34 9E-39 329.3 17.9 254 821-1094 24-306 (353)
283 3p23_A Serine/threonine-protei 100.0 3.3E-34 1.1E-38 335.9 17.5 248 821-1093 24-283 (432)
284 3o6n_A APL1; leucine-rich repe 100.0 2.8E-33 9.6E-38 325.4 22.9 154 567-727 205-358 (390)
285 3uqc_A Probable conserved tran 100.0 1.8E-33 6.3E-38 311.4 19.7 231 821-1101 31-266 (286)
286 2pzi_A Probable serine/threoni 100.0 1.4E-33 4.6E-38 351.0 16.7 239 821-1098 80-326 (681)
287 3oja_B Anopheles plasmodium-re 100.0 3.7E-33 1.3E-37 342.4 19.6 313 228-726 51-363 (597)
288 3dzo_A Rhoptry kinase domain; 100.0 1.6E-33 5.4E-38 329.0 12.9 241 822-1094 79-364 (413)
289 1ogq_A PGIP-2, polygalacturona 100.0 6.4E-33 2.2E-37 311.5 16.8 250 107-410 50-302 (313)
290 3m2w_A MAP kinase-activated pr 100.0 7.7E-33 2.6E-37 309.2 17.3 227 821-1094 17-257 (299)
291 4fmz_A Internalin; leucine ric 100.0 7E-31 2.4E-35 300.1 28.2 129 127-265 40-168 (347)
292 4fmz_A Internalin; leucine ric 100.0 9.4E-31 3.2E-35 299.1 28.7 126 567-700 221-346 (347)
293 2vuw_A Serine/threonine-protei 100.0 1.5E-33 5.2E-38 320.6 4.3 245 820-1094 19-332 (336)
294 2ft3_A Biglycan; proteoglycan, 100.0 6E-31 2.1E-35 298.5 21.7 131 567-698 193-331 (332)
295 1xku_A Decorin; proteoglycan, 100.0 6.7E-30 2.3E-34 289.7 28.8 269 107-410 52-330 (330)
296 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-30 9.7E-35 293.0 23.8 268 107-410 54-331 (332)
297 1xku_A Decorin; proteoglycan, 100.0 1E-29 3.5E-34 288.2 27.5 290 106-433 30-330 (330)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-33 4.9E-38 335.9 -5.8 63 131-193 3-70 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-33 4.5E-38 336.2 -6.8 256 107-413 3-298 (461)
300 4fcg_A Uncharacterized protein 100.0 2.5E-30 8.7E-35 292.0 8.8 198 105-308 79-285 (328)
301 2z80_A TOLL-like receptor 2, v 100.0 1.8E-29 6.3E-34 288.9 12.8 267 99-415 46-317 (353)
302 3ogk_B Coronatine-insensitive 100.0 1.7E-30 5.8E-35 319.7 4.1 148 547-694 383-545 (592)
303 2z66_A Variable lymphocyte rec 99.9 5.6E-28 1.9E-32 270.7 15.9 258 107-418 28-293 (306)
304 3ogk_B Coronatine-insensitive 99.9 1.2E-29 4.1E-34 312.1 -0.9 139 564-702 375-528 (592)
305 2z80_A TOLL-like receptor 2, v 99.9 1.8E-27 6.3E-32 272.3 17.1 281 105-440 29-319 (353)
306 2z66_A Variable lymphocyte rec 99.9 1.8E-27 6.1E-32 266.7 16.1 276 110-440 10-292 (306)
307 3g06_A SSPH2 (leucine-rich rep 99.9 3.9E-27 1.3E-31 285.9 19.0 261 109-440 42-302 (622)
308 3zyi_A Leucine-rich repeat-con 99.9 2.2E-26 7.4E-31 272.6 23.4 250 109-415 56-306 (452)
309 1ozn_A Reticulon 4 receptor; N 99.9 2.4E-26 8.1E-31 254.6 18.7 252 110-440 14-266 (285)
310 3zyi_A Leucine-rich repeat-con 99.9 6.6E-26 2.3E-30 268.5 23.5 237 98-389 68-304 (452)
311 3zyj_A Leucine-rich repeat-con 99.9 6.2E-26 2.1E-30 267.7 22.8 250 108-414 44-294 (440)
312 1ozn_A Reticulon 4 receptor; N 99.9 2.6E-26 8.9E-31 254.3 17.7 211 97-310 24-235 (285)
313 3g06_A SSPH2 (leucine-rich rep 99.9 3E-25 1E-29 269.3 28.3 116 131-266 40-155 (622)
314 1wwl_A Monocyte differentiatio 99.9 8.6E-28 3E-32 269.7 4.9 182 104-291 40-243 (312)
315 1wwl_A Monocyte differentiatio 99.9 9.6E-28 3.3E-32 269.4 5.1 250 127-413 39-310 (312)
316 3zyj_A Leucine-rich repeat-con 99.9 1.3E-25 4.4E-30 265.0 22.5 239 96-389 55-293 (440)
317 3o53_A Protein LRIM1, AGAP0063 99.9 3.9E-27 1.3E-31 265.0 7.1 266 109-416 12-280 (317)
318 4azs_A Methyltransferase WBDD; 99.9 3.9E-27 1.3E-31 284.2 7.5 184 829-1022 242-436 (569)
319 3o53_A Protein LRIM1, AGAP0063 99.9 2.3E-26 8E-31 258.7 12.0 112 567-682 169-282 (317)
320 2o6q_A Variable lymphocyte rec 99.9 7.6E-25 2.6E-29 240.3 21.0 217 34-290 3-219 (270)
321 3oja_A Leucine-rich immune mol 99.9 7.6E-26 2.6E-30 269.4 10.2 234 108-407 35-270 (487)
322 3oja_A Leucine-rich immune mol 99.9 9.3E-26 3.2E-30 268.6 10.4 156 567-726 120-287 (487)
323 2p1m_B Transport inhibitor res 99.9 2.1E-27 7.3E-32 292.2 -5.7 258 103-408 62-347 (594)
324 2p1m_B Transport inhibitor res 99.9 1.7E-26 5.7E-31 284.2 1.2 409 177-695 103-539 (594)
325 1p9a_G Platelet glycoprotein I 99.9 4.3E-24 1.5E-28 236.4 18.5 140 567-729 77-216 (290)
326 2z62_A TOLL-like receptor 4, v 99.9 5.4E-23 1.9E-27 226.4 20.5 228 135-414 11-239 (276)
327 2z62_A TOLL-like receptor 4, v 99.9 7.8E-23 2.7E-27 225.2 18.2 202 107-310 28-234 (276)
328 3m19_A Variable lymphocyte rec 99.9 9.1E-23 3.1E-27 221.1 18.3 159 132-291 36-194 (251)
329 3rfs_A Internalin B, repeat mo 99.9 5.2E-23 1.8E-27 225.9 16.4 212 102-352 36-247 (272)
330 2o6q_A Variable lymphocyte rec 99.9 4E-22 1.4E-26 218.6 23.1 200 108-311 17-216 (270)
331 3rfs_A Internalin B, repeat mo 99.9 6.4E-23 2.2E-27 225.1 16.5 228 107-375 19-246 (272)
332 3goz_A Leucine-rich repeat-con 99.9 3.1E-24 1E-28 246.2 5.7 180 111-290 2-210 (362)
333 3en9_A Glycoprotease, O-sialog 99.9 3E-24 1E-28 257.7 5.8 186 824-1025 339-539 (540)
334 1p9a_G Platelet glycoprotein I 99.9 3.3E-22 1.1E-26 221.2 19.7 202 102-311 5-206 (290)
335 2ca6_A RAN GTPase-activating p 99.9 1.2E-24 4E-29 252.2 -0.1 243 122-415 23-319 (386)
336 3m19_A Variable lymphocyte rec 99.9 9.2E-22 3.1E-26 213.2 18.2 182 545-730 17-202 (251)
337 2ast_B S-phase kinase-associat 99.9 2.3E-23 7.8E-28 236.6 4.9 201 107-309 70-281 (336)
338 4glp_A Monocyte differentiatio 99.9 6.1E-22 2.1E-26 221.9 16.4 202 105-312 89-306 (310)
339 2xwt_C Thyrotropin receptor; s 99.9 1E-21 3.5E-26 211.1 17.3 197 107-310 31-236 (239)
340 3goz_A Leucine-rich repeat-con 99.9 6.5E-23 2.2E-27 235.1 7.3 175 135-309 2-205 (362)
341 2ca6_A RAN GTPase-activating p 99.9 2.1E-23 7.1E-28 241.7 2.6 247 146-439 23-320 (386)
342 2ast_B S-phase kinase-associat 99.9 6.8E-23 2.3E-27 232.7 5.7 198 108-310 48-257 (336)
343 4glp_A Monocyte differentiatio 99.9 4.6E-22 1.6E-26 222.9 10.5 180 108-308 65-259 (310)
344 2xot_A Amphoterin-induced prot 99.9 5.1E-22 1.7E-26 227.4 9.4 180 545-728 21-209 (361)
345 3cvr_A Invasion plasmid antige 99.9 6.4E-22 2.2E-26 237.1 10.0 215 20-301 28-255 (571)
346 2v9t_B SLIT homolog 2 protein 99.8 4.6E-21 1.6E-25 202.9 13.1 159 545-728 14-172 (220)
347 1h6u_A Internalin H; cell adhe 99.8 1.5E-20 5.1E-25 210.0 17.5 193 103-312 37-229 (308)
348 2o6s_A Variable lymphocyte rec 99.8 1.3E-20 4.4E-25 197.9 15.4 164 106-277 27-190 (208)
349 2xwt_C Thyrotropin receptor; s 99.8 9.5E-21 3.3E-25 203.6 13.1 183 119-309 23-214 (239)
350 1h6u_A Internalin H; cell adhe 99.8 2.5E-20 8.5E-25 208.2 16.9 164 112-290 24-187 (308)
351 2v70_A SLIT-2, SLIT homolog 2 99.8 8.5E-21 2.9E-25 200.8 12.2 160 545-729 14-174 (220)
352 4ay9_X Follicle-stimulating ho 99.8 3.3E-20 1.1E-24 211.4 14.9 196 107-307 30-230 (350)
353 1zar_A RIO2 kinase; serine kin 99.8 8.3E-21 2.9E-25 208.5 8.5 152 815-997 84-252 (282)
354 3e6j_A Variable lymphocyte rec 99.8 1.1E-19 3.6E-24 193.7 15.7 156 544-725 21-176 (229)
355 3cvr_A Invasion plasmid antige 99.8 1.6E-19 5.5E-24 216.3 18.6 189 108-352 60-255 (571)
356 4ay9_X Follicle-stimulating ho 99.8 4.7E-20 1.6E-24 210.1 13.2 241 134-433 12-257 (350)
357 2o6s_A Variable lymphocyte rec 99.8 1.2E-19 4E-24 190.5 14.7 181 110-301 10-190 (208)
358 3e6j_A Variable lymphocyte rec 99.8 1.5E-18 5.2E-23 184.7 16.9 133 107-241 40-172 (229)
359 4b8c_D Glucose-repressible alc 99.8 3.7E-20 1.3E-24 230.3 5.0 229 4-246 130-359 (727)
360 1m9s_A Internalin B; cell inva 99.8 2.2E-18 7.4E-23 208.9 15.8 174 103-291 39-212 (605)
361 1h6t_A Internalin B; cell adhe 99.8 1.9E-18 6.5E-23 191.2 13.3 174 103-291 42-215 (291)
362 2v9t_B SLIT homolog 2 protein 99.8 4.4E-18 1.5E-22 179.8 14.8 152 135-290 15-166 (220)
363 2v70_A SLIT-2, SLIT homolog 2 99.7 8.3E-18 2.9E-22 177.7 15.3 133 158-291 35-168 (220)
364 1m9s_A Internalin B; cell inva 99.7 7.1E-18 2.4E-22 204.4 16.3 188 107-311 21-208 (605)
365 1h6t_A Internalin B; cell adhe 99.7 9.7E-18 3.3E-22 185.5 14.8 187 108-311 25-211 (291)
366 2xot_A Amphoterin-induced prot 99.7 5.7E-18 2E-22 193.7 12.6 175 110-289 21-202 (361)
367 1dce_A Protein (RAB geranylger 99.7 7.1E-20 2.4E-24 220.7 -3.9 122 568-694 442-567 (567)
368 2wfh_A SLIT homolog 2 protein 99.7 1E-17 3.5E-22 173.0 12.3 137 570-731 13-149 (193)
369 1dce_A Protein (RAB geranylger 99.7 3.9E-20 1.3E-24 223.0 -9.5 147 129-308 347-494 (567)
370 1w8a_A SLIT protein; signaling 99.7 1.9E-17 6.3E-22 171.1 11.6 103 592-694 30-133 (192)
371 4ezg_A Putative uncharacterize 99.7 2.9E-17 9.8E-22 170.6 12.7 153 104-289 41-194 (197)
372 1w8a_A SLIT protein; signaling 99.7 1.6E-17 5.5E-22 171.5 10.1 173 545-723 11-185 (192)
373 4ezg_A Putative uncharacterize 99.7 3.2E-17 1.1E-21 170.1 12.4 138 97-242 57-195 (197)
374 1xeu_A Internalin C; cellular 99.7 1.1E-17 3.9E-22 181.9 7.9 171 105-291 17-187 (263)
375 1xeu_A Internalin C; cellular 99.7 1.1E-17 3.9E-22 181.9 6.6 164 131-310 19-182 (263)
376 1zth_A RIO1 serine protein kin 99.7 4.8E-17 1.6E-21 176.4 9.0 137 823-973 49-219 (258)
377 4b8c_D Glucose-repressible alc 99.7 5.5E-17 1.9E-21 201.8 8.4 153 131-294 173-334 (727)
378 3sb4_A Hypothetical leucine ri 99.6 1.5E-16 5E-21 179.6 8.7 103 565-669 224-327 (329)
379 3sb4_A Hypothetical leucine ri 99.6 1.8E-16 6.3E-21 178.8 6.8 264 106-406 24-328 (329)
380 2wfh_A SLIT homolog 2 protein 99.6 1.3E-15 4.4E-20 157.2 12.0 128 545-677 13-140 (193)
381 2ell_A Acidic leucine-rich nuc 99.6 1.5E-15 5E-20 153.2 11.9 133 106-241 23-160 (168)
382 2ell_A Acidic leucine-rich nuc 99.6 6.4E-16 2.2E-20 155.9 8.9 134 567-702 24-162 (168)
383 2o6r_A Variable lymphocyte rec 99.6 3.6E-15 1.2E-19 151.7 12.3 130 545-678 10-139 (177)
384 2je0_A Acidic leucine-rich nuc 99.6 1E-15 3.5E-20 151.0 7.5 127 567-695 17-148 (149)
385 2je0_A Acidic leucine-rich nuc 99.6 2.1E-15 7.1E-20 148.8 8.5 127 107-236 17-148 (149)
386 2o6r_A Variable lymphocyte rec 99.6 8E-15 2.8E-19 149.2 12.9 130 568-700 8-137 (177)
387 4gyi_A RIO2 kinase; protein ki 99.5 6.6E-15 2.3E-19 165.1 7.4 139 821-974 95-266 (397)
388 3g39_A Variable lymphocyte rec 99.5 3E-14 1E-18 143.7 10.5 104 569-675 11-114 (170)
389 1ds9_A Outer arm dynein; leuci 99.5 1.9E-16 6.4E-21 164.5 -6.2 161 103-289 14-185 (198)
390 1a9n_A U2A', U2A'; complex (nu 99.5 2.2E-14 7.7E-19 145.7 7.7 128 567-700 19-153 (176)
391 1ds9_A Outer arm dynein; leuci 99.5 4.4E-16 1.5E-20 161.7 -5.2 150 151-306 14-180 (198)
392 2r9u_A Variable lymphocyte rec 99.5 7.8E-14 2.7E-18 141.1 10.6 79 615-693 33-111 (174)
393 1a9n_A U2A', U2A'; complex (nu 99.5 7.2E-14 2.5E-18 141.9 8.9 134 127-289 15-153 (176)
394 4fdw_A Leucine rich hypothetic 99.4 1.3E-12 4.6E-17 150.3 18.7 246 156-435 136-383 (401)
395 3g39_A Variable lymphocyte rec 99.4 5.3E-13 1.8E-17 134.5 12.2 108 544-655 11-118 (170)
396 2r9u_A Variable lymphocyte rec 99.4 5.6E-13 1.9E-17 134.8 11.8 105 545-653 15-119 (174)
397 4fdw_A Leucine rich hypothetic 99.4 7.4E-12 2.5E-16 144.1 19.3 266 107-413 113-384 (401)
398 4fs7_A Uncharacterized protein 99.4 1.5E-11 5.1E-16 142.1 21.6 101 563-668 293-393 (394)
399 2ifg_A High affinity nerve gro 99.3 1.3E-12 4.4E-17 148.5 9.0 103 571-676 12-116 (347)
400 4fs7_A Uncharacterized protein 99.3 2.6E-11 8.8E-16 140.2 18.9 126 559-692 268-393 (394)
401 3un9_A NLR family member X1; l 99.3 4.5E-13 1.6E-17 152.7 -0.3 87 203-289 101-196 (372)
402 2ifg_A High affinity nerve gro 99.2 4.7E-11 1.6E-15 135.5 12.6 128 545-676 11-141 (347)
403 3un9_A NLR family member X1; l 99.2 4.4E-13 1.5E-17 152.8 -5.4 143 155-298 101-261 (372)
404 4gt6_A Cell surface protein; l 99.1 2.6E-09 8.9E-14 123.3 21.6 154 126-307 58-212 (394)
405 3tm0_A Aminoglycoside 3'-phosp 99.0 3.9E-10 1.4E-14 122.3 9.9 147 816-971 9-212 (263)
406 4gt6_A Cell surface protein; l 99.0 9.8E-09 3.4E-13 118.4 20.8 134 558-698 256-389 (394)
407 2ra8_A Uncharacterized protein 98.9 3.4E-10 1.2E-14 127.8 3.4 165 99-266 131-321 (362)
408 1nd4_A Aminoglycoside 3'-phosp 98.9 1E-09 3.6E-14 118.8 6.9 137 821-971 20-213 (264)
409 3dxp_A Putative acyl-COA dehyd 98.8 7.5E-09 2.5E-13 117.8 11.2 143 825-972 42-248 (359)
410 2ra8_A Uncharacterized protein 98.8 1.6E-09 5.4E-14 122.3 4.4 182 107-291 107-322 (362)
411 3rw6_A Nuclear RNA export fact 98.7 1.1E-10 3.7E-15 124.8 -7.8 66 153-220 168-237 (267)
412 4h09_A Hypothetical leucine ri 98.7 6.6E-07 2.3E-11 102.4 21.9 40 368-408 210-249 (379)
413 3sg8_A APH(2'')-ID; antibiotic 98.7 9.7E-09 3.3E-13 113.9 4.8 186 826-1024 25-287 (304)
414 4h09_A Hypothetical leucine ri 98.6 2.1E-06 7.3E-11 98.2 22.0 121 562-686 235-355 (379)
415 1io0_A Tropomodulin; LRR prote 98.3 4E-08 1.4E-12 99.9 -1.0 119 98-216 27-164 (185)
416 3rw6_A Nuclear RNA export fact 98.3 4.4E-08 1.5E-12 104.6 -0.8 67 588-656 167-237 (267)
417 3r70_A Aminoglycoside phosphot 98.3 1.9E-06 6.4E-11 96.1 12.1 137 822-973 38-238 (320)
418 1io0_A Tropomodulin; LRR prote 98.3 2.6E-07 9E-12 93.9 3.7 61 229-289 94-164 (185)
419 3d1u_A Putative fructosamine-3 98.1 5.6E-06 1.9E-10 90.3 9.9 76 825-905 19-97 (288)
420 3tdw_A Gentamicin resistance p 98.1 2.2E-05 7.4E-10 86.7 13.6 136 826-972 24-224 (306)
421 4gkh_A Aminoglycoside 3'-phosp 98.1 1.6E-05 5.6E-10 86.0 12.2 135 828-972 31-223 (272)
422 3rfe_A Platelet glycoprotein I 98.0 4.1E-06 1.4E-10 79.2 4.5 67 643-732 12-79 (130)
423 3ovc_A Hygromycin-B 4-O-kinase 97.9 2.2E-05 7.5E-10 88.7 10.4 145 822-973 42-244 (362)
424 3ats_A Putative uncharacterize 97.8 1.9E-05 6.4E-10 89.5 6.2 81 826-906 25-121 (357)
425 3e4g_A ATP synthase subunit S, 97.5 2.1E-05 7.3E-10 77.7 1.5 34 108-141 62-95 (176)
426 3e4g_A ATP synthase subunit S, 97.5 4.1E-05 1.4E-09 75.6 2.6 83 180-262 62-149 (176)
427 3jr1_A Putative fructosamine-3 97.4 0.00061 2.1E-08 74.8 11.7 138 825-968 40-232 (312)
428 2olc_A MTR kinase, methylthior 97.4 0.00024 8.3E-09 81.5 8.8 76 826-903 35-120 (397)
429 2q83_A YTAA protein; 2635576, 97.4 0.00066 2.2E-08 76.0 12.2 139 827-971 38-251 (346)
430 2pyw_A Uncharacterized protein 97.4 0.00027 9.4E-09 81.7 8.4 78 941-1021 231-313 (420)
431 3f7w_A Putative fructosamine-3 97.2 0.00083 2.9E-08 73.2 9.9 79 822-905 16-97 (288)
432 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00016 5.4E-09 72.8 0.8 117 99-215 33-169 (197)
433 1pgv_A TMD-1, tropomodulin TMD 96.9 0.00041 1.4E-08 69.8 2.9 118 150-288 36-169 (197)
434 3csv_A Aminoglycoside phosphot 96.8 0.0042 1.4E-07 69.1 11.0 140 827-972 24-217 (333)
435 3rfe_A Platelet glycoprotein I 96.8 0.0016 5.3E-08 61.3 5.9 56 546-604 12-68 (130)
436 2yle_A Protein spire homolog 1 96.6 0.016 5.5E-07 58.5 12.1 102 904-1023 34-135 (229)
437 2ppq_A HSK, HK, homoserine kin 96.4 0.012 4.2E-07 64.9 11.3 158 810-971 6-216 (322)
438 1zyl_A Hypothetical protein YI 96.4 0.022 7.7E-07 62.9 13.3 158 810-972 10-223 (328)
439 3dxq_A Choline/ethanolamine ki 96.3 0.0049 1.7E-07 67.4 7.3 71 826-905 23-95 (301)
440 3feg_A Choline/ethanolamine ki 96.2 0.0084 2.9E-07 67.5 8.8 141 826-972 55-254 (379)
441 1nw1_A Choline kinase (49.2 KD 96.1 0.0048 1.6E-07 71.2 6.3 72 826-904 78-158 (429)
442 3c5i_A Choline kinase; choline 95.5 0.0096 3.3E-07 67.2 5.1 73 827-905 39-121 (369)
443 2qg7_A Ethanolamine kinase PV0 95.4 0.02 6.7E-07 66.3 7.4 74 826-905 113-188 (458)
444 3i1a_A Spectinomycin phosphotr 95.4 0.041 1.4E-06 61.2 9.6 31 942-972 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 94.5 0.068 2.3E-06 60.4 8.4 141 827-971 58-279 (401)
446 3mes_A Choline kinase; malaria 92.7 0.15 5.3E-06 58.0 7.3 140 826-972 75-291 (424)
447 3g15_A CK, chetk-alpha, cholin 87.5 1.2 4.2E-05 50.3 8.9 30 943-972 245-280 (401)
448 2ks1_B Epidermal growth factor 82.1 0.9 3.1E-05 32.8 2.7 29 760-788 12-40 (44)
449 4ann_A ESSB; membrane protein, 81.7 1.3 4.5E-05 44.6 4.8 123 868-1025 36-158 (215)
450 2l2t_A Receptor tyrosine-prote 79.3 0.99 3.4E-05 32.5 2.1 30 760-789 11-40 (44)
451 2k1k_A Ephrin type-A receptor 77.7 1 3.6E-05 31.4 1.8 28 759-786 11-38 (38)
452 4ano_A ESSB; membrane protein, 77.5 5 0.00017 40.5 7.6 115 876-1025 48-163 (219)
453 2jwa_A Receptor tyrosine-prote 73.6 1.4 4.7E-05 31.7 1.6 27 760-787 13-39 (44)
454 3cxl_A N-chimerin; SH2, RHO-GA 72.1 0.5 1.7E-05 54.6 -1.6 62 824-888 145-214 (463)
455 2knc_A Integrin alpha-IIB; tra 49.0 7.9 0.00027 29.2 1.8 28 758-785 9-36 (54)
456 2k1a_A Integrin alpha-IIB; sin 42.1 20 0.00067 25.6 2.9 31 758-788 7-37 (42)
457 2l8s_A Integrin alpha-1; trans 41.1 12 0.00041 28.1 1.8 26 760-785 8-33 (54)
458 1iij_A ERBB-2 receptor protein 29.1 9.2 0.00031 26.0 -0.5 7 780-786 28-34 (35)
459 3ls8_A Phosphatidylinositol 3- 28.5 3.7E+02 0.013 31.5 12.4 83 881-971 402-501 (614)
460 2lz0_A Uncharacterized protein 26.7 1.3E+02 0.0043 26.0 6.3 47 578-625 7-53 (100)
461 2l6w_A Beta-type platelet-deri 32.3 14 0.00048 25.5 0.0 25 765-789 12-36 (39)
462 2lz0_A Uncharacterized protein 24.9 56 0.0019 28.2 3.7 47 362-409 7-53 (100)
463 3ox7_P MH027; urokinase-type p 24.0 17 0.00057 21.0 0.0 9 34-42 6-14 (23)
464 1cja_A Protein (actin-fragmin 22.5 1.4E+02 0.0049 32.0 6.9 140 825-972 73-237 (342)
465 2x6h_A GH13170P, VPS34, phosph 21.7 3.3E+02 0.011 32.5 10.5 25 947-971 551-575 (696)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=8.8e-76 Score=742.09 Aligned_cols=651 Identities=30% Similarity=0.426 Sum_probs=426.2
Q ss_pred CChhhHHHHHHHHhhccCCCCcccCcCCCCCCCCceeeeEecCCCCeEEEEecCCCCCCCCCCccccccccccccccccc
Q 043720 3 KVLPEKTILLEFKNSVSDPSGILSSWQTNTSSHCSWFGVSCDSESRVVALNITGGDVSEGNSKPFFSCLMTAQFPFYGFG 82 (1103)
Q Consensus 3 ~~~~~~~aLl~~k~~~~d~~~~l~sW~~~~~~~C~W~GV~C~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1103)
..++|++|||+||+++.||. .++||+.+ .|||+|.||+|+ .+||+++++++..+.+... ..... +. .
T Consensus 9 ~~~~~~~all~~k~~~~~~~-~l~~W~~~-~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~-~l~~~-----l~----~ 75 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKN-LLPDWSSN-KNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFS-AVSSS-----LL----S 75 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTT-SSTTCCTT-SCGGGSTTEEEE-TTEEEEEECTTSCCCEEHH-HHHHH-----TT----T
T ss_pred CCHHHHHHHHHHHhhCCCcc-cccCCCCC-CCCcCCcceEEC-CCcEEEEECCCCCcCCccC-ccChh-----Hh----c
Confidence 46789999999999999998 99999854 589999999999 7899999998754321000 00000 00 0
Q ss_pred cccceeccCCCccccccCcccCCCCCCCEEEccCCCCcccCCc--cccCCCCCCEEEeecCCCCCCccccc-cCCCCCCE
Q 043720 83 MRRRTCLHGRGKLVGKLSPLVGGLSELRVLSLPFNGFSGEFPP--EIWSLEKLEVLDVEGNFLSGRLPNEF-VGLRNLRV 159 (1103)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~--~l~~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~ 159 (1103)
......++....-.-.+|+.++++++|++|+|++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++
T Consensus 76 L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 76 LTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp CTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred cCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 0000001101111112334455555555555555555554544 45555555555555555554444443 44555555
Q ss_pred EEccccccCCCCCCC---CCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECc
Q 043720 160 LNLAFNRIDGDIPFS---LRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLS 236 (1103)
Q Consensus 160 L~Ls~N~l~~~~p~~---l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~ 236 (1103)
|+|++|++++..|.. +.++++|++|++++|.+++.+|. +.+++|++|+|++|++++.+|. ++. +++|++|+|+
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~-l~~L~~L~Ls 231 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGD-CSALQHLDIS 231 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTT-CCSCCEEECC
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-ccc-CCCCCEEECc
Confidence 555555555444443 44455555555555555444332 4445555555555555544443 322 3445555555
Q ss_pred CCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCC-CCCCeEecccCcCccc
Q 043720 237 GNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNC-VELSVLVLSNLFDPLL 315 (1103)
Q Consensus 237 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~l~~~~~~~l 315 (1103)
+|++++.+|..++++++|++|++++|.+++.+|.. .+++|++|++++|+++|.+|..+... ++|+.|+++
T Consensus 232 ~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls------- 302 (768)
T 3rgz_A 232 GNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLS------- 302 (768)
T ss_dssp SSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECC-------
T ss_pred CCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECc-------
Confidence 55555444555555555555555555554444432 44555555555555555555544443 555555554
Q ss_pred cCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCCcc-ccccccCcEEEcCCcccccccchh
Q 043720 316 SGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSS-WGACESLEMLNLAQNVLRGDLIGV 394 (1103)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~~~~ 394 (1103)
.|.+.+.+|..++.+++|+.|++++|.+.+.+|.. +.++++|++|+|++|++++..|..
T Consensus 303 --------------------~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~ 362 (768)
T 3rgz_A 303 --------------------GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPES 362 (768)
T ss_dssp --------------------SSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTT
T ss_pred --------------------CCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHH
Confidence 46666677777777777777777777777777655 777777777777777777777777
Q ss_pred hhccC-CceEeecCCccccccccccc-c--ccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHH
Q 043720 395 FDRCK-KLHFIDLSSNELSGELDVKL-Q--VPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYF 470 (1103)
Q Consensus 395 ~~~l~-~L~~LdLs~N~l~~~~~~~~-~--~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1103)
+.+++ +|++|+|++|++++.++... . +++|+.|++++|+++|.+|....+ ...++...+..
T Consensus 363 l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~---l~~L~~L~Ls~------------ 427 (768)
T 3rgz_A 363 LTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN---CSELVSLHLSF------------ 427 (768)
T ss_dssp HHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGG---CTTCCEEECCS------------
T ss_pred HHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhc---CCCCCEEECcC------------
Confidence 77766 77777777777776554433 2 566777777777777766643211 11112111111
Q ss_pred HhhhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccccceeee-eccccccccCCcchhhhcccccccEEec
Q 043720 471 MSKARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFL-AGANKLTGSFPGSLFQACNEFHGMVANL 549 (1103)
Q Consensus 471 ~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lp~~~~~~~~~~~~~~l~l 549 (1103)
+......|..+..++.|..+++++|++++.+ +..+.....+..+ ...|++.+.+|..+ ..+.. ...|++
T Consensus 428 -N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~--L~~L~L 497 (768)
T 3rgz_A 428 -NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI------PQELMYVKTLETLILDFNDLTGEIPSGL-SNCTN--LNWISL 497 (768)
T ss_dssp -SEEESCCCGGGGGCTTCCEEECCSSCCCSCC------CGGGGGCTTCCEEECCSSCCCSCCCGGG-GGCTT--CCEEEC
T ss_pred -CcccCcccHHHhcCCCCCEEECCCCcccCcC------CHHHcCCCCceEEEecCCcccCcCCHHH-hcCCC--CCEEEc
Confidence 1112234555667778888888888888643 2223333333333 34556666777664 34444 458999
Q ss_pred CCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCccc------------------
Q 043720 550 SNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSL------------------ 611 (1103)
Q Consensus 550 s~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------------------ 611 (1103)
++|++++.+|.++..+ ++|++|+|++|++++.+|..+.++++|++|+|++|+++|.+|..+
T Consensus 498 ~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~ 576 (768)
T 3rgz_A 498 SNNRLTGEIPKWIGRL-ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYV 576 (768)
T ss_dssp CSSCCCSCCCGGGGGC-TTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEE
T ss_pred cCCccCCcCChHHhcC-CCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccc
Confidence 9999999999998876 899999999999999999999999999999999999887777543
Q ss_pred ----------------------------------------------------ccCccCcEEeccCcccCCCCCCcccCCC
Q 043720 612 ----------------------------------------------------HRLKYLRHLSLADNNLTGGIPSSIGELR 639 (1103)
Q Consensus 612 ----------------------------------------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 639 (1103)
..+++|+.|+|++|+++|.+|..|++++
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~ 656 (768)
T 3rgz_A 577 YIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 656 (768)
T ss_dssp EEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCT
T ss_pred ccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccc
Confidence 3457899999999999999999999999
Q ss_pred CCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCC--CccccccccccC
Q 043720 640 SLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPW--NVTTMNCSGVIG 717 (1103)
Q Consensus 640 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~--~~~~~~~~~l~~ 717 (1103)
+|++|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+..++.|+.||+++|+++|.+|. .+.++....+.|
T Consensus 657 ~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~g 736 (768)
T 3rgz_A 657 YLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLN 736 (768)
T ss_dssp TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCS
T ss_pred cCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999996 466778888999
Q ss_pred CCCCCCCC
Q 043720 718 NPFLDPCQ 725 (1103)
Q Consensus 718 Np~~c~C~ 725 (1103)
||..|.-.
T Consensus 737 N~~Lcg~~ 744 (768)
T 3rgz_A 737 NPGLCGYP 744 (768)
T ss_dssp CTEEESTT
T ss_pred CchhcCCC
Confidence 99998643
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.3e-60 Score=597.14 Aligned_cols=570 Identities=28% Similarity=0.371 Sum_probs=493.7
Q ss_pred ccccc---cCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccc--cccCCCCCCEEEccccccC
Q 043720 94 KLVGK---LSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPN--EFVGLRNLRVLNLAFNRID 168 (1103)
Q Consensus 94 ~~~g~---~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~--~l~~l~~L~~L~Ls~N~l~ 168 (1103)
.+.|. +|+.+++|++|+.++++.+++. .+|..++++++|++|||++|.++|.+|. .++.+++|++|+|++|.++
T Consensus 61 ~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~ 139 (768)
T 3rgz_A 61 PLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLD 139 (768)
T ss_dssp CCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEE
T ss_pred CcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccC
Confidence 46677 9999999999999999999886 5778999999999999999999999999 9999999999999999999
Q ss_pred CCCCCCC-CCCCCCCEEEccCCcCCCCCChh---cccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCcccccc
Q 043720 169 GDIPFSL-RNFESLEVLNLAGNQVKGVIPGF---LGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRI 244 (1103)
Q Consensus 169 ~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~---l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~ 244 (1103)
+.+|..+ .++++|++|+|++|++++..|.. ++++++|++|++++|++++.+|. ..+++|++|+|++|++++.+
T Consensus 140 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~ 216 (768)
T 3rgz_A 140 FPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGI 216 (768)
T ss_dssp CCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCC
T ss_pred CcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCC
Confidence 9999877 89999999999999999988877 88999999999999999987775 34688999999999999888
Q ss_pred CccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcc
Q 043720 245 PSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGEL 324 (1103)
Q Consensus 245 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~ 324 (1103)
|. ++++++|++|++++|.+++.+|.++..+++|++|+|++|++++.+|.. .+++|++|++++
T Consensus 217 ~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~--------------- 278 (768)
T 3rgz_A 217 PF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAE--------------- 278 (768)
T ss_dssp CB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCS---------------
T ss_pred cc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcC---------------
Confidence 87 999999999999999999999999999999999999999999988876 899999999985
Q ss_pred cccccCCCCCCCCcccccCchhhhcc-ccccccccCCccccccCCccccccccCcEEEcCCcccccccchh-hhccCCce
Q 043720 325 SVGQSDASNGEKNSFIGSIPMEITTL-SKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGV-FDRCKKLH 402 (1103)
Q Consensus 325 ~~~~~~~~~~~~n~~~~~ip~~~~~L-~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~ 402 (1103)
|.+.+.+|..+..+ ++|+.|++++|.+.+.+|..|+++++|++|+|++|++.+.+|.. |.++++|+
T Consensus 279 ------------n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~ 346 (768)
T 3rgz_A 279 ------------NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346 (768)
T ss_dssp ------------SEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCC
T ss_pred ------------CccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCC
Confidence 77888999999876 99999999999999999999999999999999999999777754 99999999
Q ss_pred EeecCCccccccccccc-ccc-ceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchh
Q 043720 403 FIDLSSNELSGELDVKL-QVP-CMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPL 480 (1103)
Q Consensus 403 ~LdLs~N~l~~~~~~~~-~~~-~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1103)
+|+|++|++++.+|... .++ +|+.|++++|+++|.+|...... ....++...+ ..+......|.
T Consensus 347 ~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~-~~~~L~~L~L-------------~~n~l~~~~p~ 412 (768)
T 3rgz_A 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN-PKNTLQELYL-------------QNNGFTGKIPP 412 (768)
T ss_dssp EEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCS-TTCCCCEEEC-------------CSSEEEEECCG
T ss_pred EEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhc-ccCCccEEEC-------------CCCccccccCH
Confidence 99999999998777654 566 89999999999999888643210 0011222111 11222223566
Q ss_pred hhhcccceEEEecCCCccccccccCCCCccccccccceeeee-ccccccccCCcchhhhcccccccEEecCCCcccccCC
Q 043720 481 LVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLA-GANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIP 559 (1103)
Q Consensus 481 ~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip 559 (1103)
.+..++.|+.+++++|++++.+ +..+........+. ..|.+.+.+|..+. .+. ..+.|++++|++++.+|
T Consensus 413 ~l~~l~~L~~L~Ls~N~l~~~~------p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~--~L~~L~L~~N~l~~~~p 483 (768)
T 3rgz_A 413 TLSNCSELVSLHLSFNYLSGTI------PSSLGSLSKLRDLKLWLNMLEGEIPQELM-YVK--TLETLILDFNDLTGEIP 483 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESCC------CGGGGGCTTCCEEECCSSCCCSCCCGGGG-GCT--TCCEEECCSSCCCSCCC
T ss_pred HHhcCCCCCEEECcCCcccCcc------cHHHhcCCCCCEEECCCCcccCcCCHHHc-CCC--CceEEEecCCcccCcCC
Confidence 7888899999999999998743 22233333333333 45666777887653 333 35689999999999999
Q ss_pred chhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcc----
Q 043720 560 LDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSI---- 635 (1103)
Q Consensus 560 ~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---- 635 (1103)
..+..+ ++|++|+|++|++++.+|.+|+.+++|++|+|++|++++.+|..+..+++|+.|+|++|+++|.+|..+
T Consensus 484 ~~l~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~ 562 (768)
T 3rgz_A 484 SGLSNC-TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 562 (768)
T ss_dssp GGGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTT
T ss_pred HHHhcC-CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhccc
Confidence 998876 999999999999999999999999999999999999999999999999999999999999998777543
Q ss_pred ------------------------------------------------------------------cCCCCCcEEeccCc
Q 043720 636 ------------------------------------------------------------------GELRSLEVLELSSN 649 (1103)
Q Consensus 636 ------------------------------------------------------------------~~l~~L~~L~Ls~N 649 (1103)
+.+++|++|||++|
T Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N 642 (768)
T 3rgz_A 563 GKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYN 642 (768)
T ss_dssp TCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSS
T ss_pred chhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCC
Confidence 34678999999999
Q ss_pred cccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCcc---ccccccccCCCCC
Q 043720 650 SLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNVT---TMNCSGVIGNPFL 721 (1103)
Q Consensus 650 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~---~~~~~~l~~Np~~ 721 (1103)
+++|.+|..++.+++|+.|+|++|+++|.+|..++++++|+.||+++|+++|.+|..+. .+..+++.+|+..
T Consensus 643 ~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 643 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp CCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred cccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 99999999999999999999999999999999999999999999999999999997655 4566679999775
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.7e-57 Score=568.01 Aligned_cols=564 Identities=21% Similarity=0.166 Sum_probs=424.6
Q ss_pred ccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCC
Q 043720 96 VGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSL 175 (1103)
Q Consensus 96 ~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l 175 (1103)
.+..+..++++++|++|+|++|.+++..|..++++++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..+
T Consensus 38 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 117 (680)
T 1ziw_A 38 RRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPF 117 (680)
T ss_dssp CCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTT
T ss_pred CCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHc
Confidence 33334468899999999999999999889999999999999999999995555579999999999999999997777889
Q ss_pred CCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHh-hcCcCcEEECcCCccccccCccccCCCCC
Q 043720 176 RNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGK-YCRYLEHLDLSGNSLVGRIPSSLGKCQQL 254 (1103)
Q Consensus 176 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~-~~~~L~~L~L~~N~l~~~~p~~l~~l~~L 254 (1103)
+++++|++|+|++|.+++..|..++++++|++|++++|++++..+..+.. .+++|++|++++|++++..|..+..+++|
T Consensus 118 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 197 (680)
T 1ziw_A 118 VKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRL 197 (680)
T ss_dssp TTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEE
T ss_pred cccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhh
Confidence 99999999999999999988888999999999999999999655554432 24679999999999998888888888888
Q ss_pred CEEeCCCccCCcccccccc---CCCCCCEEEccCCcCCCcCCccccCCCC--CCeEecccCcCccccCccccCccccccc
Q 043720 255 RTLLLFSNMLNDVIPRELG---WLRKLEVLDVSRNRLNGLIPTELGNCVE--LSVLVLSNLFDPLLSGRNIRGELSVGQS 329 (1103)
Q Consensus 255 ~~L~L~~N~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~l~~~~~~~l~~~~~~~~~~~~~~ 329 (1103)
+.|++++|.+.+.....+. ..++|+.|++++|.+++..|..+..++. |+.|++++
T Consensus 198 ~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~-------------------- 257 (680)
T 1ziw_A 198 FGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSY-------------------- 257 (680)
T ss_dssp CEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTT--------------------
T ss_pred hhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCC--------------------
Confidence 8888877776543222221 2467788888888887777777777654 88888874
Q ss_pred CCCCCCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCccccc---------ccchhhhccCC
Q 043720 330 DASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRG---------DLIGVFDRCKK 400 (1103)
Q Consensus 330 ~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---------~~~~~~~~l~~ 400 (1103)
|.+.+..|..++.+++|+.|++++|.+.+..|..|.++++|+.|+|++|...+ .....|..+++
T Consensus 258 -------n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~ 330 (680)
T 1ziw_A 258 -------NNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKC 330 (680)
T ss_dssp -------SCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTT
T ss_pred -------CCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCC
Confidence 44455556666677777777777777777777777777777777777665442 11125666777
Q ss_pred ceEeecCCccccccccc-cccccceeEEEecCCcccccc-CCCCcccccccccccccccccccCCCchhhHHHhhhhcCc
Q 043720 401 LHFIDLSSNELSGELDV-KLQVPCMALFDVSGNHMSGSI-PRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGM 478 (1103)
Q Consensus 401 L~~LdLs~N~l~~~~~~-~~~~~~L~~l~ls~N~l~g~i-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1103)
|++|+|++|++++..+. +..+++|+.|++++|.+++.. +...+..+
T Consensus 331 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~-------------------------------- 378 (680)
T 1ziw_A 331 LEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSL-------------------------------- 378 (680)
T ss_dssp CCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGG--------------------------------
T ss_pred CCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhccc--------------------------------
Confidence 77777777777765544 335677777777777654321 11100000
Q ss_pred hhhhhcccceEEEecCCCccccccccCCCCccccccccceeeee-ccccccccCCcchhhhcccccccEEecCCCccccc
Q 043720 479 PLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLA-GANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGH 557 (1103)
Q Consensus 479 ~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ 557 (1103)
....+..+++++|++++... ..+.....+..+. ..|.+.+.+|...|..+..+ ..+++++|++.+.
T Consensus 379 -----~~~~L~~L~L~~n~l~~~~~------~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L--~~L~Ls~n~l~~~ 445 (680)
T 1ziw_A 379 -----AHSPLHILNLTKNKISKIES------DAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENI--FEIYLSYNKYLQL 445 (680)
T ss_dssp -----TTSCCCEEECTTSCCCEECT------TTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTC--CEEECCSCSEEEC
T ss_pred -----ccCcCceEECCCCCCCeECh------hhhhCCCCCCEEeCCCCcCccccCcccccCcccc--cEEecCCCCccee
Confidence 01234455555555554211 1111112222222 23344455666666666554 5799999999866
Q ss_pred CCchhhhcCCCccEEECcCCcCC--CCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCC----
Q 043720 558 IPLDIGVMCKSLRVLDASHNQIS--GIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGI---- 631 (1103)
Q Consensus 558 ip~~~~~~~~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~---- 631 (1103)
.|..+.. +++|++|++++|.++ +.+|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|++++..
T Consensus 446 ~~~~~~~-~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 524 (680)
T 1ziw_A 446 TRNSFAL-VPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHAN 524 (680)
T ss_dssp CTTTTTT-CTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTS
T ss_pred Chhhhhc-CcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhc
Confidence 6666654 599999999999997 578999999999999999999999877788999999999999999998642
Q ss_pred ----CCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCC--
Q 043720 632 ----PSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPW-- 705 (1103)
Q Consensus 632 ----p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~-- 705 (1103)
+..|.++++|++|+|++|+|+.+.+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++++.+|.
T Consensus 525 ~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 604 (680)
T 1ziw_A 525 PGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVF 604 (680)
T ss_dssp TTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHH
T ss_pred cCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHh
Confidence 23478999999999999999966566799999999999999999977777889999999999999999998876
Q ss_pred --CccccccccccCCCCCCCCCC-CCCCCC
Q 043720 706 --NVTTMNCSGVIGNPFLDPCQM-YKDISS 732 (1103)
Q Consensus 706 --~~~~~~~~~l~~Np~~c~C~~-~~~~~~ 732 (1103)
.+..+..+.+.+|||.|||++ ..+..|
T Consensus 605 ~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~ 634 (680)
T 1ziw_A 605 GPAFRNLTELDMRFNPFDCTCESIAWFVNW 634 (680)
T ss_dssp HHHHTTCSEEECTTCCCCBCCCCCSSEECC
T ss_pred cccccccCEEEccCCCcccCCccHHHHHHH
Confidence 356788889999999999996 444444
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.6e-57 Score=557.06 Aligned_cols=493 Identities=20% Similarity=0.299 Sum_probs=333.5
Q ss_pred hhhHHHHHHHHhhccCC-CC-------cccCcCCCCCCCCce---eeeEecCCCCeEEEEecCCCCCCCCCCcccccccc
Q 043720 5 LPEKTILLEFKNSVSDP-SG-------ILSSWQTNTSSHCSW---FGVSCDSESRVVALNITGGDVSEGNSKPFFSCLMT 73 (1103)
Q Consensus 5 ~~~~~aLl~~k~~~~d~-~~-------~l~sW~~~~~~~C~W---~GV~C~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~ 73 (1103)
.+|++||.+||.++.++ +. ..++|+.+ .|||.| .||+|+..+||+++++.+.
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~---------------- 91 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGF---------------- 91 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTS----------------
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCc----------------
Confidence 46999999999998544 22 34589875 589999 9999998899999998764
Q ss_pred ccccccccccccceeccCCCccccccCcccCCCCCCCEEEccCCCC------cc------cCCccccCCCCCCEEEeecC
Q 043720 74 AQFPFYGFGMRRRTCLHGRGKLVGKLSPLVGGLSELRVLSLPFNGF------SG------EFPPEIWSLEKLEVLDVEGN 141 (1103)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~l~~L~~L~L~~n~l------~g------~~p~~l~~l~~L~~L~Ls~n 141 (1103)
.+.|.+|+++++|++|++|+|++|.+ .| .+|... +..|+ ++++.|
T Consensus 92 --------------------~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~ 148 (636)
T 4eco_A 92 --------------------GASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKT 148 (636)
T ss_dssp --------------------CCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHH
T ss_pred --------------------ccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHh
Confidence 35689999999999999999999976 33 555544 56677 888888
Q ss_pred CCCCCccccccCC-CCCCEEEccccccCCCCCCCCCCCCCCCEEEcc--CCcCCCCCChhcccCCCCcEeecccccCCCC
Q 043720 142 FLSGRLPNEFVGL-RNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLA--GNQVKGVIPGFLGSFLKLRVLFLSYNELNGS 218 (1103)
Q Consensus 142 ~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~--~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ 218 (1103)
.+.+.+|..+..+ ..+..+++....+. ......++.+++. +|+++| +|..++++++|++|+|++|+++|.
T Consensus 149 ~l~~~~~~~~~~~~~~l~~~~l~~~~~~------~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~ 221 (636)
T 4eco_A 149 FVDYDPREDFSDLIKDCINSDPQQKSIK------KSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAE 221 (636)
T ss_dssp HTCCCGGGGSCHHHHHHHHHCTTSCCCC------CCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGG
T ss_pred hhccCchhhHHHHHHHHhhcCccccccc------cccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccc
Confidence 8888888777632 33333333322222 1111222323232 456666 666666666666666666666654
Q ss_pred -----------------CChhHH--hhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCcc-CCc-cccccccCC--
Q 043720 219 -----------------IPSELG--KYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNM-LND-VIPRELGWL-- 275 (1103)
Q Consensus 219 -----------------ip~~~~--~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~l~~l-- 275 (1103)
+|..++ . +++|++|+|++|++.+.+|..++++++|++|++++|+ +++ .+|..++.+
T Consensus 222 ~~~~~~~~~~~~~~~~~ip~~l~~~~-l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~ 300 (636)
T 4eco_A 222 NICEAWENENSEYAQQYKTEDLKWDN-LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALAD 300 (636)
T ss_dssp GBSSSCSCTTSHHHHHHTTSCCCGGG-CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHH
T ss_pred cccccccccccchhcccCchhhhhcc-cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhc
Confidence 666665 4 3557777777777666677777777777777777776 666 666666655
Q ss_pred ----CCCCEEEccCCcCCCcCCc--cccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhc
Q 043720 276 ----RKLEVLDVSRNRLNGLIPT--ELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITT 349 (1103)
Q Consensus 276 ----~~L~~L~Ls~N~l~~~~p~--~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~ 349 (1103)
++|+.|+|++|+++ .+|. .++++++|+.|++++ |.+.|.+| .++.
T Consensus 301 ~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~---------------------------N~l~g~ip-~~~~ 351 (636)
T 4eco_A 301 APVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLY---------------------------NQLEGKLP-AFGS 351 (636)
T ss_dssp SGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCS---------------------------CCCEEECC-CCEE
T ss_pred cccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcC---------------------------CcCccchh-hhCC
Confidence 67777777777777 6666 677777777777763 55666677 6777
Q ss_pred cccccccccCCccccccCCcccccccc-CcEEEcCCcccccccchhhhccC--CceEeecCCccccccccccc-------
Q 043720 350 LSKLRIIWAPRLNLEGKLPSSWGACES-LEMLNLAQNVLRGDLIGVFDRCK--KLHFIDLSSNELSGELDVKL------- 419 (1103)
Q Consensus 350 L~~L~~L~l~~n~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~--~L~~LdLs~N~l~~~~~~~~------- 419 (1103)
+++|+.|++++|.+. .+|..+..+++ |++|+|++|+++ .+|..+..++ +|++|+|++|++++.+|...
T Consensus 352 l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~ 429 (636)
T 4eco_A 352 EIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTP 429 (636)
T ss_dssp EEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSC
T ss_pred CCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccccccc
Confidence 777777777777777 67777888887 888888888887 5566666544 78888888887776543221
Q ss_pred -cccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCcc
Q 043720 420 -QVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNF 498 (1103)
Q Consensus 420 -~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~ 498 (1103)
.+++|+
T Consensus 430 ~~~~~L~------------------------------------------------------------------------- 436 (636)
T 4eco_A 430 FKGINVS------------------------------------------------------------------------- 436 (636)
T ss_dssp CCCCCEE-------------------------------------------------------------------------
T ss_pred ccCCCCC-------------------------------------------------------------------------
Confidence 112222
Q ss_pred ccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCccEEECcCCc
Q 043720 499 TGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQ 578 (1103)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~ 578 (1103)
.|++++|++. .+|..++..+++|++|+|++|+
T Consensus 437 -----------------------------------------------~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~ 468 (636)
T 4eco_A 437 -----------------------------------------------SINLSNNQIS-KFPKELFSTGSPLSSINLMGNM 468 (636)
T ss_dssp -----------------------------------------------EEECCSSCCC-SCCTHHHHTTCCCSEEECCSSC
T ss_pred -----------------------------------------------EEECcCCccC-cCCHHHHccCCCCCEEECCCCC
Confidence 3445555554 4555555444666666666666
Q ss_pred CCCCCcccccCCC-------CCCEEEccCCcCCCCCCcccc--cCccCcEEeccCcccCCCCCCcccCCCCCcEEec---
Q 043720 579 ISGIVPQSLENLT-------SLVFLDLNGNKLQGEIPSSLH--RLKYLRHLSLADNNLTGGIPSSIGELRSLEVLEL--- 646 (1103)
Q Consensus 579 l~~~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L--- 646 (1103)
|+.+.+..+.... +|++|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|++|+|
T Consensus 469 l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 469 LTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp CSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred CCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 6633333333222 6777777777776 5666665 67777777777777775 6666677777777777
Q ss_pred ---cCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCC
Q 043720 647 ---SSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGP 702 (1103)
Q Consensus 647 ---s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~ 702 (1103)
++|++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.||+++|++...
T Consensus 547 ~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 547 RDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp BCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEE
T ss_pred cccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccc
Confidence 56777778888888888888888888888 46777655 7888888888877643
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-54 Score=553.87 Aligned_cols=498 Identities=22% Similarity=0.231 Sum_probs=367.0
Q ss_pred cCcccCCCCCCCEEEccCCCCcccC-CccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCC--C
Q 043720 99 LSPLVGGLSELRVLSLPFNGFSGEF-PPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFS--L 175 (1103)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~n~l~g~~-p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~--l 175 (1103)
.+..++++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++.+|.. +
T Consensus 40 ~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 119 (844)
T 3j0a_A 40 TASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYF 119 (844)
T ss_dssp CSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCC
T ss_pred ChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccc
Confidence 3455666677777777766555555 556666777777777777776666666777777777777777776655544 6
Q ss_pred CCCCCCCEEEccCCcCCCCCC-hhcccCCCCcEeecccccCCCCCChhHHhhc-CcCcEEECcCCccccccCccccCCCC
Q 043720 176 RNFESLEVLNLAGNQVKGVIP-GFLGSFLKLRVLFLSYNELNGSIPSELGKYC-RYLEHLDLSGNSLVGRIPSSLGKCQQ 253 (1103)
Q Consensus 176 ~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~-~~L~~L~L~~N~l~~~~p~~l~~l~~ 253 (1103)
+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..|..+.... ++|+.|++++|.+++..|..++.+++
T Consensus 120 ~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 199 (844)
T 3j0a_A 120 RNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMN 199 (844)
T ss_dssp SSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSC
T ss_pred cccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCC
Confidence 667777777777777665544 4566677777777777776655565554421 45677777777776666666555554
Q ss_pred ------CCEEeCCCccCCccccccccCC---CCCCEEEccC---------CcCCCcCCccccCC--CCCCeEecccCcCc
Q 043720 254 ------LRTLLLFSNMLNDVIPRELGWL---RKLEVLDVSR---------NRLNGLIPTELGNC--VELSVLVLSNLFDP 313 (1103)
Q Consensus 254 ------L~~L~L~~N~l~~~~p~~l~~l---~~L~~L~Ls~---------N~l~~~~p~~l~~l--~~L~~L~l~~~~~~ 313 (1103)
|+.|++++|.+++..+..+... .+++.|+++. |.+.+..+..+..+ ++|+.|++++
T Consensus 200 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~---- 275 (844)
T 3j0a_A 200 PFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSH---- 275 (844)
T ss_dssp TTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTT----
T ss_pred ccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCC----
Confidence 6777777776666655555432 4556666552 22333333334433 5677777774
Q ss_pred cccCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccch
Q 043720 314 LLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIG 393 (1103)
Q Consensus 314 ~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 393 (1103)
|.+.+..|..+..+++|+.|++++|.+.+..|..|.++++|++|+|++|++++..+.
T Consensus 276 -----------------------n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 332 (844)
T 3j0a_A 276 -----------------------GFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332 (844)
T ss_dssp -----------------------CCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC
T ss_pred -----------------------CcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH
Confidence 566667788889999999999999999999999999999999999999999999999
Q ss_pred hhhccCCceEeecCCccccccccc-cccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHh
Q 043720 394 VFDRCKKLHFIDLSSNELSGELDV-KLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMS 472 (1103)
Q Consensus 394 ~~~~l~~L~~LdLs~N~l~~~~~~-~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1103)
.|.++++|+.|+|++|++++..+. +..+++|+.|++++|++++ ++.
T Consensus 333 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~-------------------------------- 379 (844)
T 3j0a_A 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IHF-------------------------------- 379 (844)
T ss_dssp SCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CSS--------------------------------
T ss_pred HhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-ccC--------------------------------
Confidence 999999999999999999876654 4578999999999998873 111
Q ss_pred hhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCC
Q 043720 473 KARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNN 552 (1103)
Q Consensus 473 ~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n 552 (1103)
+..+ ..+++++|
T Consensus 380 ------------~~~L--------------------------------------------------------~~L~l~~N 391 (844)
T 3j0a_A 380 ------------IPSI--------------------------------------------------------PDIFLSGN 391 (844)
T ss_dssp ------------CCSC--------------------------------------------------------SEEEEESC
T ss_pred ------------CCCc--------------------------------------------------------chhccCCC
Confidence 0011 23556666
Q ss_pred cccccCCchhhhcCCCccEEECcCCcCCCCC-cccccCCCCCCEEEccCCcCCCCCCc-ccccCccCcEEeccCcccC--
Q 043720 553 NIIGHIPLDIGVMCKSLRVLDASHNQISGIV-PQSLENLTSLVFLDLNGNKLQGEIPS-SLHRLKYLRHLSLADNNLT-- 628 (1103)
Q Consensus 553 ~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~-- 628 (1103)
++. .+|.. ..+++.|++++|++++.. +..+.++++|+.|+|++|++++..+. .+..+++|+.|+|++|.++
T Consensus 392 ~l~-~l~~~----~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~ 466 (844)
T 3j0a_A 392 KLV-TLPKI----NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLA 466 (844)
T ss_dssp CCC-CCCCC----CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSS
T ss_pred Ccc-ccccc----ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccc
Confidence 665 45543 256888999999998642 23456889999999999999865433 4566889999999999987
Q ss_pred ---CCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCC
Q 043720 629 ---GGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPW 705 (1103)
Q Consensus 629 ---~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~ 705 (1103)
+..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..+. ++|+.||+++|+|++.+|.
T Consensus 467 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~ 544 (844)
T 3j0a_A 467 WETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD 544 (844)
T ss_dssp CCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC
T ss_pred cccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh
Confidence 44556788899999999999999988888899999999999999999977776665 8899999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCCCC
Q 043720 706 NVTTMNCSGVIGNPFLDPCQMYKDIS 731 (1103)
Q Consensus 706 ~~~~~~~~~l~~Np~~c~C~~~~~~~ 731 (1103)
.+..+..+.+.+|||.|+|++..+..
T Consensus 545 ~~~~L~~l~l~~Np~~C~c~~~~f~~ 570 (844)
T 3j0a_A 545 VFVSLSVLDITHNKFICECELSTFIN 570 (844)
T ss_dssp CCSSCCEEEEEEECCCCSSSCCSHHH
T ss_pred HhCCcCEEEecCCCcccccccHHHHH
Confidence 88888999999999999999865443
No 6
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.2e-55 Score=544.57 Aligned_cols=482 Identities=18% Similarity=0.207 Sum_probs=314.7
Q ss_pred ChhhHHHHHHHHhhccCCCCcccCcCCCC----CCC--Cce------------eeeEecCCCCeEEEEecCCCCCCCCCC
Q 043720 4 VLPEKTILLEFKNSVSDPSGILSSWQTNT----SSH--CSW------------FGVSCDSESRVVALNITGGDVSEGNSK 65 (1103)
Q Consensus 4 ~~~~~~aLl~~k~~~~d~~~~l~sW~~~~----~~~--C~W------------~GV~C~~~~~v~~l~l~~~~~~~~~~~ 65 (1103)
..+|++||++||+++.|| +|+.++ .+| |+| .||+|+..+||++|++++.
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~-------- 333 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGF-------- 333 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTT--------
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccC--------
Confidence 457999999999999887 886554 345 999 9999998899999999764
Q ss_pred ccccccccccccccccccccceeccCCCccccccCcccCCCCCCCEEEc-cCCCCcccCCcccc----------------
Q 043720 66 PFFSCLMTAQFPFYGFGMRRRTCLHGRGKLVGKLSPLVGGLSELRVLSL-PFNGFSGEFPPEIW---------------- 128 (1103)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~l~~L~~L~L-~~n~l~g~~p~~l~---------------- 128 (1103)
.+.|.+|+.+++|++|++|+| ++|.++|..|-...
T Consensus 334 ----------------------------~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~ 385 (876)
T 4ecn_A 334 ----------------------------GAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRM 385 (876)
T ss_dssp ----------------------------CCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHT
T ss_pred ----------------------------CCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHH
Confidence 456899999999999999999 88988887553211
Q ss_pred -----------------------------------CCCCCCEEEee--cCCCCCCccccccCCCCCCEEEccccccCC--
Q 043720 129 -----------------------------------SLEKLEVLDVE--GNFLSGRLPNEFVGLRNLRVLNLAFNRIDG-- 169 (1103)
Q Consensus 129 -----------------------------------~l~~L~~L~Ls--~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-- 169 (1103)
....++.+.+. .|+++| +|..|+++++|++|+|++|+|+|
T Consensus 386 ~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~ 464 (876)
T 4ecn_A 386 HYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDN 464 (876)
T ss_dssp HHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGG
T ss_pred hhhhhhhccCcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCc
Confidence 11122333333 377776 88888888888888888888887
Q ss_pred ---------------CCCCCCC--CCCCCCEEEccCCcCCCCCChhcccCCCCcEeeccccc-CCC-CCChhHHhhc---
Q 043720 170 ---------------DIPFSLR--NFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNE-LNG-SIPSELGKYC--- 227 (1103)
Q Consensus 170 ---------------~~p~~l~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~g-~ip~~~~~~~--- 227 (1103)
.+|..++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..++.+.
T Consensus 465 i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~ 544 (876)
T 4ecn_A 465 IAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDE 544 (876)
T ss_dssp BSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCT
T ss_pred ccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcc
Confidence 3788877 88888888888888888888888888888888888887 877 7887776642
Q ss_pred ---CcCcEEECcCCccccccCc--cccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCC-
Q 043720 228 ---RYLEHLDLSGNSLVGRIPS--SLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVE- 301 (1103)
Q Consensus 228 ---~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~- 301 (1103)
++|++|+|++|+++ .+|. .++++++|+.|+|++|.++ .+| .|+.+++|+.|+|++|+++ .+|..+.++++
T Consensus 545 ~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~ 620 (876)
T 4ecn_A 545 DTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQ 620 (876)
T ss_dssp TTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTT
T ss_pred cccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhcccc
Confidence 36777777777777 6776 7777777777777777777 466 6777777777777777777 66766777776
Q ss_pred CCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhcccc--ccccccCCccccccCCccc---c--cc
Q 043720 302 LSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSK--LRIIWAPRLNLEGKLPSSW---G--AC 374 (1103)
Q Consensus 302 L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~--L~~L~l~~n~l~~~~p~~~---~--~l 374 (1103)
|+.|++++ |.+. .+|..+..++. |+.|++++|.+.+.+|... . .+
T Consensus 621 L~~L~Ls~---------------------------N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~ 672 (876)
T 4ecn_A 621 VEGLGFSH---------------------------NKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKG 672 (876)
T ss_dssp CCEEECCS---------------------------SCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCC
T ss_pred CCEEECcC---------------------------CCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccC
Confidence 77777764 2222 34444444332 5555555555555443211 1 12
Q ss_pred ccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccccccceeEEEecCCccccccCCCCcccccccccccc
Q 043720 375 ESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSS 454 (1103)
Q Consensus 375 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~ 454 (1103)
++|+.|+|++|+++..+...+..+++ |+.|++++|+++ .+|......
T Consensus 673 ~~L~~L~Ls~N~L~~lp~~~~~~l~~-----------------------L~~L~Ls~N~L~-~ip~~~~~~--------- 719 (876)
T 4ecn_A 673 INASTVTLSYNEIQKFPTELFATGSP-----------------------ISTIILSNNLMT-SIPENSLKP--------- 719 (876)
T ss_dssp CCEEEEECCSSCCCSCCHHHHHTTCC-----------------------CSEEECCSCCCS-CCCTTSSSC---------
T ss_pred CCcCEEEccCCcCCccCHHHHccCCC-----------------------CCEEECCCCcCC-ccChHHhcc---------
Confidence 24445555555554333333344444 445555555444 333211000
Q ss_pred cccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcc
Q 043720 455 DLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGS 534 (1103)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 534 (1103)
. + .
T Consensus 720 ----------------------------------------------~------------------------------~-~ 722 (876)
T 4ecn_A 720 ----------------------------------------------K------------------------------D-G 722 (876)
T ss_dssp ----------------------------------------------T------------------------------T-S
T ss_pred ----------------------------------------------c------------------------------c-c
Confidence 0 0 0
Q ss_pred hhhhcccccccEEecCCCcccccCCchhh-hcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccC------CcCCCCC
Q 043720 535 LFQACNEFHGMVANLSNNNIIGHIPLDIG-VMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNG------NKLQGEI 607 (1103)
Q Consensus 535 ~~~~~~~~~~~~l~ls~n~~~~~ip~~~~-~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~ 607 (1103)
.+.+|. .+..|+|++|+++ .+|..++ ..+++|+.|+|++|+|++ +|..+.++++|+.|+|++ |++.+.+
T Consensus 723 ~l~nl~--~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~i 798 (876)
T 4ecn_A 723 NYKNTY--LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQW 798 (876)
T ss_dssp CCTTGG--GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCC
T ss_pred cccccC--CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccC
Confidence 000000 1234566666665 5666655 223677777777777775 566677777777777765 5566666
Q ss_pred CcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCc
Q 043720 608 PSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLS 676 (1103)
Q Consensus 608 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 676 (1103)
|..|..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+..+.....+..+.|.+|++.
T Consensus 799 p~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 799 PTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp CTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTS
T ss_pred hHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCcc
Confidence 66666666666666666666 35665554 46666666666666555555555555566666666554
No 7
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.5e-54 Score=530.05 Aligned_cols=526 Identities=18% Similarity=0.150 Sum_probs=421.0
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 78999999999999888889999999999999999999888889999999999999999999888999999999999999
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCC-CCChhHHhhcCcCcEEECcCCccccccCccccCCCCCC----EEeCCC
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNG-SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLR----TLLLFS 261 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g-~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~ 261 (1103)
++|++++..+..++++++|++|++++|++++ .+|..+.. +++|++|++++|++++..+..++.+++|+ +|++++
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSN-LTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGT-CTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhh-cCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 9999998887889999999999999999985 57888876 48899999999999988888888877665 899999
Q ss_pred ccCCccccccccCCCCCCEEEccCCcCC-CcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCccc
Q 043720 262 NMLNDVIPRELGWLRKLEVLDVSRNRLN-GLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFI 340 (1103)
Q Consensus 262 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~ 340 (1103)
|.+++..+..+... +|+.|++++|.++ +.+|..+.++++|+.+++..+...... . ...+.
T Consensus 191 n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~--------~----------l~~~~ 251 (606)
T 3vq2_A 191 NPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER--------N----------LEIFE 251 (606)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSC--------C----------CSCCC
T ss_pred CCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCC--------c----------ccccC
Confidence 99998666665554 8999999999997 467888999999999888632111000 0 01111
Q ss_pred ccCchhhhcccccccccc-CCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccc
Q 043720 341 GSIPMEITTLSKLRIIWA-PRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKL 419 (1103)
Q Consensus 341 ~~ip~~~~~L~~L~~L~l-~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~ 419 (1103)
...+..+..+ +++.+++ ..+.+.+.+|. +..+++|+.|++++|.+.... .+..+++|+.|++++|++ +.+|..
T Consensus 252 ~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l-~~lp~~- 325 (606)
T 3vq2_A 252 PSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQL-KQFPTL- 325 (606)
T ss_dssp GGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCC-SSCCCC-
T ss_pred hHHhhhhhhc-cHhheeccccccccccccc-cccCCCCCEEEecCccchhhh--hccccccCCEEEcccccC-cccccC-
Confidence 2223333333 3555555 56667777766 777888888888888876543 677777888888888887 556655
Q ss_pred cccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCccc
Q 043720 420 QVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNFT 499 (1103)
Q Consensus 420 ~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~ 499 (1103)
.+++|+.|++++|+..+.++ +..++.|..+++++|+++
T Consensus 326 ~l~~L~~L~l~~n~~~~~~~------------------------------------------~~~l~~L~~L~ls~n~l~ 363 (606)
T 3vq2_A 326 DLPFLKSLTLTMNKGSISFK------------------------------------------KVALPSLSYLDLSRNALS 363 (606)
T ss_dssp CCSSCCEEEEESCSSCEECC------------------------------------------CCCCTTCCEEECCSSCEE
T ss_pred CCCccceeeccCCcCccchh------------------------------------------hccCCCCCEEECcCCccC
Confidence 77778888888876554332 112345667777777776
Q ss_pred cccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCccEEECcCCcC
Q 043720 500 GPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQI 579 (1103)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l 579 (1103)
+..+ +|. .+..+. ....+++++|.+. .+|..+..+ ++|++|++++|++
T Consensus 364 ~~~~---------------------------~~~-~~~~~~--~L~~L~L~~n~l~-~~~~~~~~l-~~L~~L~l~~n~l 411 (606)
T 3vq2_A 364 FSGC---------------------------CSY-SDLGTN--SLRHLDLSFNGAI-IMSANFMGL-EELQHLDFQHSTL 411 (606)
T ss_dssp EEEE---------------------------CCH-HHHCCS--CCCEEECCSCSEE-EECCCCTTC-TTCCEEECTTSEE
T ss_pred CCcc---------------------------hhh-hhccCC--cccEeECCCCccc-cchhhccCC-CCCCeeECCCCcc
Confidence 5210 011 112222 2457899999987 477666654 8999999999999
Q ss_pred CCCCc-ccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCC-CCCCcccCCCCCcEEeccCccccCcChh
Q 043720 580 SGIVP-QSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTG-GIPSSIGELRSLEVLELSSNSLSGEVPE 657 (1103)
Q Consensus 580 ~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 657 (1103)
++..| ..|.++++|++|++++|.+++..|..+..+++|++|+|++|++++ .+|..|+.+++|++|+|++|++++..|.
T Consensus 412 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 491 (606)
T 3vq2_A 412 KRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWG 491 (606)
T ss_dssp ESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred CCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChh
Confidence 98877 789999999999999999998899999999999999999999997 4788999999999999999999988899
Q ss_pred hhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCC--Ccc-ccccccccCCCCCCCCCCCCCCCC
Q 043720 658 GVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPW--NVT-TMNCSGVIGNPFLDPCQMYKDISS 732 (1103)
Q Consensus 658 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~--~~~-~~~~~~l~~Np~~c~C~~~~~~~~ 732 (1103)
.+..+++|+.|+|++|++++.+|..+..+++|+.|++++|+++..++. .+. .+..+.+.+|||.|+|++..+..|
T Consensus 492 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~ 569 (606)
T 3vq2_A 492 VFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQW 569 (606)
T ss_dssp TTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTT
T ss_pred hhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHH
Confidence 999999999999999999988899999999999999999999965544 222 367778999999999998665544
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.6e-54 Score=529.97 Aligned_cols=528 Identities=17% Similarity=0.138 Sum_probs=429.1
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEcc
Q 043720 108 ELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLA 187 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (1103)
.+++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..++++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 68999999999998889999999999999999999998889999999999999999999998889999999999999999
Q ss_pred CCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCC--EEeCCCccCC
Q 043720 188 GNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLR--TLLLFSNMLN 265 (1103)
Q Consensus 188 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~--~L~L~~N~l~ 265 (1103)
+|++++..+..++++++|++|++++|++++..++.+.. +++|++|++++|++++..|..++.+++|+ .|++++|.++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFP-TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCC-CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccC-CcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999877888999999999999999999532233333 68899999999999988888899999999 8999999999
Q ss_pred ccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCch
Q 043720 266 DVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPM 345 (1103)
Q Consensus 266 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~ 345 (1103)
+..|..+.. .+|+.|++++|. .++..+..+.++....+.-..... .....+....+.
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~-------------------~~~~~i~~~~~~ 249 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFED-------------------MDDEDISPAVFE 249 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTT-------------------SCCCCCCGGGGG
T ss_pred ccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhcc-------------------ccccccChhHhc
Confidence 977766654 689999999987 345566666665544443111000 001112222222
Q ss_pred hhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCcccccccc-ccccccce
Q 043720 346 EITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELD-VKLQVPCM 424 (1103)
Q Consensus 346 ~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~-~~~~~~~L 424 (1103)
.+..+ +|+.|++++|.+.+..+..|..+++|++|+|++|+++ .+|..+.++++|++|+|++|++++..+ .+..+++|
T Consensus 250 ~l~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 327 (606)
T 3t6q_A 250 GLCEM-SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSL 327 (606)
T ss_dssp GGGGS-EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTC
T ss_pred hhhcC-ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcC
Confidence 22222 6888899999998888888999999999999999988 566678888999999999999887765 44578889
Q ss_pred eEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCcccccccc
Q 043720 425 ALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNFTGPICW 504 (1103)
Q Consensus 425 ~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~ 504 (1103)
+.|++++|++.+.+|.. .+..++.|..+++++|++++..+.
T Consensus 328 ~~L~l~~n~~~~~~~~~---------------------------------------~~~~l~~L~~L~l~~n~l~~~~~~ 368 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTG---------------------------------------CLENLENLRELDLSHDDIETSDCC 368 (606)
T ss_dssp SEEECCSCSSCCBCCSS---------------------------------------TTTTCTTCCEEECCSSCCCEEEES
T ss_pred CEEECCCCCcccccchh---------------------------------------hhhccCcCCEEECCCCccccccCc
Confidence 99999999888776642 123455677888888888753210
Q ss_pred CCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCc
Q 043720 505 LPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVP 584 (1103)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p 584 (1103)
|. .+..+. ....+++++|++.+..|..+... ++|++|++++|++++..+
T Consensus 369 ---------------------------~~-~~~~l~--~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~ 417 (606)
T 3t6q_A 369 ---------------------------NL-QLRNLS--HLQSLNLSYNEPLSLKTEAFKEC-PQLELLDLAFTRLKVKDA 417 (606)
T ss_dssp ---------------------------TT-TTTTCT--TCCEEECCSCSCEEECTTTTTTC-TTCSEEECTTCCEECCTT
T ss_pred ---------------------------ch-hcccCC--CCCEEECCCCcCCcCCHHHhcCC-ccCCeEECCCCcCCCccc
Confidence 00 011122 34578999999997777777655 899999999999997765
Q ss_pred c-cccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCC---CCCcccCCCCCcEEeccCccccCcChhhhh
Q 043720 585 Q-SLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGG---IPSSIGELRSLEVLELSSNSLSGEVPEGVV 660 (1103)
Q Consensus 585 ~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 660 (1103)
. .|..+++|++|++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|+|++|++++..|..+.
T Consensus 418 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 497 (606)
T 3t6q_A 418 QSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFT 497 (606)
T ss_dssp CCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTT
T ss_pred chhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhc
Confidence 4 489999999999999999988899999999999999999999862 346789999999999999999988899999
Q ss_pred hcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCC---ccccccccccCCCCCCCCCCCCCCCC
Q 043720 661 NLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWN---VTTMNCSGVIGNPFLDPCQMYKDISS 732 (1103)
Q Consensus 661 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~---~~~~~~~~l~~Np~~c~C~~~~~~~~ 732 (1103)
.+++|+.|+|++|++++..|..+..++.| .|++++|++++.+|.. +..+..+++.+|||.|+|++..+..|
T Consensus 498 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w 571 (606)
T 3t6q_A 498 SLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEW 571 (606)
T ss_dssp TCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHH
T ss_pred cccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHH
Confidence 99999999999999999999999999999 9999999999988864 44667788999999999997654443
No 9
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.5e-52 Score=518.17 Aligned_cols=549 Identities=19% Similarity=0.144 Sum_probs=440.4
Q ss_pred cccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCC
Q 043720 97 GKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLR 176 (1103)
Q Consensus 97 g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 176 (1103)
..+|..+. +++++|+|++|.+++..|..++++++|++|||++|.+++..|..|+++++|++|+|++|++++..+..|+
T Consensus 17 ~~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~ 94 (680)
T 1ziw_A 17 TQVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA 94 (680)
T ss_dssp SSCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhc
Confidence 45776654 7899999999999877777889999999999999999988888899999999999999999854445788
Q ss_pred CCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCcccc--CCCCC
Q 043720 177 NFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLG--KCQQL 254 (1103)
Q Consensus 177 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~--~l~~L 254 (1103)
++++|++|+|++|++++..|..|+++++|++|++++|.+++..|..+.. +++|++|++++|++++..+..++ .+++|
T Consensus 95 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 173 (680)
T 1ziw_A 95 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQ-LENLQELLLSNNKIQALKSEELDIFANSSL 173 (680)
T ss_dssp TCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSC-CTTCCEEECCSSCCCCBCHHHHGGGTTCEE
T ss_pred cCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcc-cccCCEEEccCCcccccCHHHhhccccccc
Confidence 9999999999999998777788899999999999999998666665554 57899999999999876666554 45889
Q ss_pred CEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCcccc---CCCCCCeEecccCcCccccCccccCcccccccCC
Q 043720 255 RTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELG---NCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDA 331 (1103)
Q Consensus 255 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~ 331 (1103)
+.|++++|.+++..|..+..+.+|+.|++++|.+.+.....+. ..++|+.|++++
T Consensus 174 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~---------------------- 231 (680)
T 1ziw_A 174 KKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSN---------------------- 231 (680)
T ss_dssp SEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTT----------------------
T ss_pred cEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccC----------------------
Confidence 9999999999988888888899999999998887643322221 347888888875
Q ss_pred CCCCCCcccccCchhhhcccc--ccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCc
Q 043720 332 SNGEKNSFIGSIPMEITTLSK--LRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSN 409 (1103)
Q Consensus 332 ~~~~~n~~~~~ip~~~~~L~~--L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N 409 (1103)
|.+.+..|..+..++. |+.|++++|.+.+..|..|+.+++|++|+|++|++.+..+..|.++++|+.|+|++|
T Consensus 232 -----n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~ 306 (680)
T 1ziw_A 232 -----SQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS 306 (680)
T ss_dssp -----SCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTC
T ss_pred -----CcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccch
Confidence 6677777888888865 999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccc-----cc-----ccccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCch
Q 043720 410 ELSGE-----LD-----VKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMP 479 (1103)
Q Consensus 410 ~l~~~-----~~-----~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1103)
...+. +| .+..+++|+.|++++|++++..|..
T Consensus 307 ~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~-------------------------------------- 348 (680)
T 1ziw_A 307 FTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNM-------------------------------------- 348 (680)
T ss_dssp BCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTT--------------------------------------
T ss_pred hhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhH--------------------------------------
Confidence 76542 23 3446789999999999998754431
Q ss_pred hhhhcccceEEEecCCCccccccccCCCCccccccccceeeeec-cccccccCCcchhhhcccccccEEecCCCcccccC
Q 043720 480 LLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAG-ANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHI 558 (1103)
Q Consensus 480 ~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~i 558 (1103)
+..+..|+.+++++|.+++....-... ..+ .......+.. .|++.+..| ..|..+.. ...|++++|.+.+.+
T Consensus 349 --~~~l~~L~~L~Ls~n~~~~~~l~~~~f-~~~-~~~~L~~L~L~~n~l~~~~~-~~~~~l~~--L~~L~L~~N~l~~~~ 421 (680)
T 1ziw_A 349 --FTGLINLKYLSLSNSFTSLRTLTNETF-VSL-AHSPLHILNLTKNKISKIES-DAFSWLGH--LEVLDLGLNEIGQEL 421 (680)
T ss_dssp --TTTCTTCCEEECTTCBSCCCEECTTTT-GGG-TTSCCCEEECTTSCCCEECT-TTTTTCTT--CCEEECCSSCCEEEC
T ss_pred --hccccCCcEEECCCCchhhhhcchhhh-ccc-ccCcCceEECCCCCCCeECh-hhhhCCCC--CCEEeCCCCcCcccc
Confidence 334566788899998865422110000 000 0112333333 344444444 44554544 458999999999989
Q ss_pred CchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCC--CCCCcccccCccCcEEeccCcccCCCCCCccc
Q 043720 559 PLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQ--GEIPSSLHRLKYLRHLSLADNNLTGGIPSSIG 636 (1103)
Q Consensus 559 p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 636 (1103)
|...+..+++|++|++++|++++..+..|..+++|+.|++++|.++ +.+|..|..+++|+.|+|++|++++..+..|.
T Consensus 422 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 501 (680)
T 1ziw_A 422 TGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE 501 (680)
T ss_dssp CSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhc
Confidence 8766666699999999999999888999999999999999999987 56899999999999999999999988888899
Q ss_pred CCCCCcEEeccCccccCcCh--------hhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCc-
Q 043720 637 ELRSLEVLELSSNSLSGEVP--------EGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNV- 707 (1103)
Q Consensus 637 ~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~- 707 (1103)
++++|++|+|++|++++..+ ..+..+++|+.|+|++|+|+...+..|.++++|+.|++++|++++.++..+
T Consensus 502 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 581 (680)
T 1ziw_A 502 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFN 581 (680)
T ss_dssp TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhC
Confidence 99999999999999986432 237889999999999999995555679999999999999999998877644
Q ss_pred --cccccccccCCCC
Q 043720 708 --TTMNCSGVIGNPF 720 (1103)
Q Consensus 708 --~~~~~~~l~~Np~ 720 (1103)
..+..+.+.+|..
T Consensus 582 ~l~~L~~L~L~~N~l 596 (680)
T 1ziw_A 582 NQVSLKSLNLQKNLI 596 (680)
T ss_dssp TCTTCCEEECTTSCC
T ss_pred CCCCCCEEECCCCcC
Confidence 5667777888855
No 10
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.4e-50 Score=498.17 Aligned_cols=483 Identities=20% Similarity=0.175 Sum_probs=407.9
Q ss_pred ccccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCC
Q 043720 94 KLVGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPF 173 (1103)
Q Consensus 94 ~~~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 173 (1103)
.+.+..|..++++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|.
T Consensus 44 ~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~ 123 (606)
T 3t6q_A 44 VLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFI 123 (606)
T ss_dssp CCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGS
T ss_pred ccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcc
Confidence 34444566899999999999999999999999999999999999999999988899999999999999999999976688
Q ss_pred CCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCc--EEECcCCccccccCccccCC
Q 043720 174 SLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLE--HLDLSGNSLVGRIPSSLGKC 251 (1103)
Q Consensus 174 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~--~L~L~~N~l~~~~p~~l~~l 251 (1103)
.++++++|++|++++|++++..+..+..+++|++|++++|++++..|..+.. +++|+ .|++++|++++..|..+..
T Consensus 124 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~l~L~l~~n~l~~~~~~~~~~- 201 (606)
T 3t6q_A 124 PLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSS-LQQATNLSLNLNGNDIAGIEPGAFDS- 201 (606)
T ss_dssp CCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHT-TTTCCSEEEECTTCCCCEECTTTTTT-
T ss_pred hhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhh-hcccceeEEecCCCccCccChhHhhh-
Confidence 8999999999999999999854444555999999999999999555655555 57799 8999999999877766554
Q ss_pred CCCCEEeCCCccCC--------------------------ccccccccCCC--CCCEEEccCCcCCCcCCccccCCCCCC
Q 043720 252 QQLRTLLLFSNMLN--------------------------DVIPRELGWLR--KLEVLDVSRNRLNGLIPTELGNCVELS 303 (1103)
Q Consensus 252 ~~L~~L~L~~N~l~--------------------------~~~p~~l~~l~--~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 303 (1103)
.+|+.|++++|... ...+..+..+. +|+.|++++|.+++..+..|+.+++|+
T Consensus 202 ~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 281 (606)
T 3t6q_A 202 AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQ 281 (606)
T ss_dssp CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCS
T ss_pred ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCC
Confidence 68999999887510 11122233332 789999999999998888899999999
Q ss_pred eEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcC
Q 043720 304 VLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLA 383 (1103)
Q Consensus 304 ~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls 383 (1103)
.|++++ |.+. .+|..+..+++|+.|++++|.+.+..|..+..+++|++|+++
T Consensus 282 ~L~l~~---------------------------n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 282 ELDLTA---------------------------THLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEECTT---------------------------SCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred EEeccC---------------------------CccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 999985 3333 688889999999999999999999999999999999999999
Q ss_pred Ccccccccc-hhhhccCCceEeecCCccccccc---cccccccceeEEEecCCccccccCCCCccccccccccccccccc
Q 043720 384 QNVLRGDLI-GVFDRCKKLHFIDLSSNELSGEL---DVKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQG 459 (1103)
Q Consensus 384 ~N~l~~~~~-~~~~~l~~L~~LdLs~N~l~~~~---~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~ 459 (1103)
+|.+.+..+ ..|..+++|++|++++|++++.. ..+..+++|+.|++++|++++..|..
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~------------------ 395 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEA------------------ 395 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTT------------------
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHH------------------
Confidence 999986554 56999999999999999998764 34568899999999999988654431
Q ss_pred ccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhc
Q 043720 460 YDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQAC 539 (1103)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~ 539 (1103)
+..++.
T Consensus 396 ----------------------~~~l~~---------------------------------------------------- 401 (606)
T 3t6q_A 396 ----------------------FKECPQ---------------------------------------------------- 401 (606)
T ss_dssp ----------------------TTTCTT----------------------------------------------------
T ss_pred ----------------------hcCCcc----------------------------------------------------
Confidence 111111
Q ss_pred ccccccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCC---CCcccccCcc
Q 043720 540 NEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGE---IPSSLHRLKY 616 (1103)
Q Consensus 540 ~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~ 616 (1103)
.+.+++++|++.+..|......+++|++|++++|.+++..|..|..+++|++|+|++|++++. .+..+..+++
T Consensus 402 ----L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~ 477 (606)
T 3t6q_A 402 ----LELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGR 477 (606)
T ss_dssp ----CSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTT
T ss_pred ----CCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCC
Confidence 235677777777776666444558999999999999988899999999999999999999862 3467899999
Q ss_pred CcEEeccCcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCC
Q 043720 617 LRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASF 696 (1103)
Q Consensus 617 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~ 696 (1103)
|+.|+|++|++++..|..|+.+++|++|+|++|++++..|..+..+++| .|+|++|++++.+|..+..+++|+.+++++
T Consensus 478 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 556 (606)
T 3t6q_A 478 LEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQ 556 (606)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTT
T ss_pred ccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCC
Confidence 9999999999998889999999999999999999999899999999999 999999999988888889999999999999
Q ss_pred CCCCCCC
Q 043720 697 NNLSGPF 703 (1103)
Q Consensus 697 N~l~~~~ 703 (1103)
|++...-
T Consensus 557 N~~~c~c 563 (606)
T 3t6q_A 557 NPLDCTC 563 (606)
T ss_dssp CCEECSG
T ss_pred CCccccC
Confidence 9998643
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-49 Score=491.10 Aligned_cols=503 Identities=19% Similarity=0.155 Sum_probs=416.6
Q ss_pred cccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCC
Q 043720 95 LVGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFS 174 (1103)
Q Consensus 95 ~~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 174 (1103)
+.+..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..
T Consensus 44 l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 123 (606)
T 3vq2_A 44 LKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFP 123 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSC
T ss_pred cCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccc
Confidence 44444557999999999999999999888999999999999999999999888999999999999999999999777789
Q ss_pred CCCCCCCCEEEccCCcCCC-CCChhcccCCCCcEeecccccCCCCCChhHHhhcCcC----cEEECcCCccccccCcccc
Q 043720 175 LRNFESLEVLNLAGNQVKG-VIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYL----EHLDLSGNSLVGRIPSSLG 249 (1103)
Q Consensus 175 l~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L----~~L~L~~N~l~~~~p~~l~ 249 (1103)
++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..|..+... .+| .+|++++|.+++..+..+.
T Consensus 124 ~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~~l~~L~l~~n~l~~~~~~~~~ 202 (606)
T 3vq2_A 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFL-RENPQVNLSLDMSLNPIDFIQDQAFQ 202 (606)
T ss_dssp CTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHH-HHCTTCCCEEECTTCCCCEECTTTTT
T ss_pred cCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhh-hccccccceeeccCCCcceeCccccc
Confidence 9999999999999999986 679999999999999999999997666666554 445 4899999999966555554
Q ss_pred CCCCCCEEeCCCccCCc-cccccccCCCCCCEEEccCCcCCCc------CCccccCCCC--CCeEecccCcCccccCccc
Q 043720 250 KCQQLRTLLLFSNMLND-VIPRELGWLRKLEVLDVSRNRLNGL------IPTELGNCVE--LSVLVLSNLFDPLLSGRNI 320 (1103)
Q Consensus 250 ~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~------~p~~l~~l~~--L~~L~l~~~~~~~l~~~~~ 320 (1103)
. .+|+.|++++|.+++ ..|..+..+++|+.+++..+.+.+. .+..+..+.. ++.+++.
T Consensus 203 ~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~------------ 269 (606)
T 3vq2_A 203 G-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT------------ 269 (606)
T ss_dssp T-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC------------
T ss_pred C-ceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc------------
Confidence 4 499999999999984 6788899999999999876655431 1122222222 2333332
Q ss_pred cCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCC
Q 043720 321 RGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKK 400 (1103)
Q Consensus 321 ~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 400 (1103)
..+.+.+.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+ +.+| .+ .+++
T Consensus 270 --------------~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~ 329 (606)
T 3vq2_A 270 --------------YTNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPF 329 (606)
T ss_dssp --------------CCTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSS
T ss_pred --------------ccccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCc
Confidence 14667777777 8999999999999999864 55 889999999999999999 4555 45 8999
Q ss_pred ceEeecCCccccccccccccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchh
Q 043720 401 LHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPL 480 (1103)
Q Consensus 401 L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1103)
|+.|++++|+..+.+ ....+++|+.|++++|++++..+ .+.
T Consensus 330 L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~~~~--------------------------------------~~~ 370 (606)
T 3vq2_A 330 LKSLTLTMNKGSISF-KKVALPSLSYLDLSRNALSFSGC--------------------------------------CSY 370 (606)
T ss_dssp CCEEEEESCSSCEEC-CCCCCTTCCEEECCSSCEEEEEE--------------------------------------CCH
T ss_pred cceeeccCCcCccch-hhccCCCCCEEECcCCccCCCcc--------------------------------------hhh
Confidence 999999999766555 45578999999999999885321 123
Q ss_pred hhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCc
Q 043720 481 LVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPL 560 (1103)
Q Consensus 481 ~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~ 560 (1103)
.+..++.|..+++++|.+++.+.. |..+. ....|++++|++.+..|.
T Consensus 371 ~~~~~~~L~~L~L~~n~l~~~~~~-------------------------------~~~l~--~L~~L~l~~n~l~~~~~~ 417 (606)
T 3vq2_A 371 SDLGTNSLRHLDLSFNGAIIMSAN-------------------------------FMGLE--ELQHLDFQHSTLKRVTEF 417 (606)
T ss_dssp HHHCCSCCCEEECCSCSEEEECCC-------------------------------CTTCT--TCCEEECTTSEEESTTTT
T ss_pred hhccCCcccEeECCCCccccchhh-------------------------------ccCCC--CCCeeECCCCccCCccCh
Confidence 345667788899999988752211 11122 245799999999988884
Q ss_pred hhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCC-CCCcccccCccCcEEeccCcccCCCCCCcccCCC
Q 043720 561 DIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQG-EIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELR 639 (1103)
Q Consensus 561 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 639 (1103)
.....+++|++|++++|.+++..|..|.++++|++|+|++|++++ .+|..|..+++|+.|+|++|++++..|..|.+++
T Consensus 418 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 497 (606)
T 3vq2_A 418 SAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLH 497 (606)
T ss_dssp TTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccc
Confidence 444455999999999999999999999999999999999999997 4799999999999999999999999999999999
Q ss_pred CCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCC-CCceEeCCCCCCCCCCC
Q 043720 640 SLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVT-SLSIFNASFNNLSGPFP 704 (1103)
Q Consensus 640 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~l~l~~N~l~~~~p 704 (1103)
+|++|+|++|++++..|..+..+++|+.|+|++|+|+ .+|..+..++ +|+.|++++|++...-+
T Consensus 498 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 498 RLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred cCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999999999988999999999999999999999 6777798887 59999999999987443
No 12
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.4e-50 Score=450.31 Aligned_cols=260 Identities=23% Similarity=0.400 Sum_probs=212.4
Q ss_pred cCCCCcceeccCCcccEEEEEEc------CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
++|.+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+.+..|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 35777889999999999999865 47889999997543 445688999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhhc-------------CCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC
Q 043720 895 LIYNYLPGGNLENFIKART-------------SRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN 961 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 961 (1103)
+|||||++|+|.++++... ...+++.++.+|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 9999999999999997642 23589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHH
Q 043720 962 AYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIIS 1039 (1103)
Q Consensus 962 ~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 1039 (1103)
+||+|||+|+........ ......||++|||||++.+..|+.++|||||||++|||+| |+.||.... ..+
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--------~~~ 268 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--------NTE 268 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--------HHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--------HHH
Confidence 999999999876443332 3345679999999999999999999999999999999999 899987321 112
Q ss_pred HHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1040 WASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
....... + .....+..+++++.+++.+||+.||++||||+||+++|+.+.++|
T Consensus 269 ~~~~i~~-g---------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 269 AIDCITQ-G---------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp HHHHHHH-T---------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred HHHHHHc-C---------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 2222211 1 123345677889999999999999999999999999999998887
No 13
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.1e-50 Score=447.64 Aligned_cols=257 Identities=25% Similarity=0.363 Sum_probs=216.3
Q ss_pred CCCCcceeccCCcccEEEEEEc------CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 822 DFNTSNCIGSGGFGTTYKAEIS------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
++++.+.||+|+||+||+|.+. +++.||||+++........++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4667889999999999999863 4688999999876666667889999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhhc--------------CCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC
Q 043720 896 IYNYLPGGNLENFIKART--------------SRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN 961 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 961 (1103)
|||||++|+|.++++... ...+++.++.+|+.|||+||+|||++ +||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 999999999999997542 23589999999999999999999999 9999999999999999999
Q ss_pred EEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHH
Q 043720 962 AYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIIS 1039 (1103)
Q Consensus 962 ~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 1039 (1103)
+||+|||+|+........ ......||++|||||++.+..|+.++|||||||++|||+| |+.||.... ..+
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~--------~~~ 255 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--------NQD 255 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--------HHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--------HHH
Confidence 999999999876443332 3445689999999999999999999999999999999999 888986321 112
Q ss_pred HHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1040 WASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1040 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
....+ .. ....+.+..++..+.+++.+||+.||++||||+||+++|+.+.
T Consensus 256 ~~~~i-~~---------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 256 VVEMI-RN---------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHHHH-HT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHHH-Hc---------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 22221 11 1223446678889999999999999999999999999999763
No 14
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.5e-50 Score=445.10 Aligned_cols=258 Identities=24% Similarity=0.419 Sum_probs=216.2
Q ss_pred cCCCCcceeccCCcccEEEEEEc------CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
++|.+.+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++..|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 46888899999999999999764 47889999997643 345678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhhc-----------CCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEE
Q 043720 895 LIYNYLPGGNLENFIKART-----------SRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAY 963 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 963 (1103)
+|||||++|+|.++++... ...+++.++.+|+.|||+||+|||++ +|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 9999999999999997642 24699999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCcc-ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHH
Q 043720 964 LSDFGLSRLLGTSETHA-TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWA 1041 (1103)
Q Consensus 964 i~Dfgla~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1041 (1103)
|+|||+|+......... .....||++|||||++.+..|+.++|||||||++|||+| |+.||.... ..+..
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--------~~~~~ 240 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNEVI 240 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------HHHHH
Confidence 99999998765443332 334568999999999999999999999999999999999 899987321 11222
Q ss_pred HHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1042 SMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.... .+ .....+..++.++.+++.+||+.||++||||+||.+.|+++.+
T Consensus 241 ~~i~-~~---------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~ 289 (299)
T 4asz_A 241 ECIT-QG---------RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK 289 (299)
T ss_dssp HHHH-HT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHH-cC---------CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 2221 11 1223456678899999999999999999999999999999854
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-49 Score=434.86 Aligned_cols=262 Identities=27% Similarity=0.436 Sum_probs=209.7
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEccccc-chhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGR-FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.+++++.+.||+|+||+||+|++++ .||||+++... ..+..+.|.+|+.++++++|||||+++|++.+ +.+|+|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 3578889999999999999998763 59999997543 34456789999999999999999999999865 56899999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC-
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE- 977 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~- 977 (1103)
||++|+|.++++... ..+++.++.+|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+......
T Consensus 112 y~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 112 WCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred cCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999998653 4599999999999999999999999 99999999999999999999999999998764332
Q ss_pred CccccCCcccccccCcccccc---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 978 THATTGVAGTFGYVAPEYALT---CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
.......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||..... ..........+..
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~--------~~~~~~~~~~~~~---- 255 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--------RDQIIFMVGRGYA---- 255 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------HHHHHHHHHTTCC----
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh--------HHHHHHHHhcCCC----
Confidence 233455689999999999863 4689999999999999999999999973221 1122222222211
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
.+. ....+..++..+.++|.+||+.||++||||+||+++|+.++.+
T Consensus 256 ~p~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 256 SPD-LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CCC-STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred CCC-cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 111 1223456778899999999999999999999999999988754
No 16
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.5e-49 Score=479.37 Aligned_cols=311 Identities=15% Similarity=0.127 Sum_probs=239.0
Q ss_pred ccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCC
Q 043720 98 KLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRN 177 (1103)
Q Consensus 98 ~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 177 (1103)
.+|+.+. ++|++|+|++|.+++..|..+.++++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..+++
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 96 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP 96 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc
Confidence 3555443 78999999999999988999999999999999999999888899999999999999999999777777999
Q ss_pred CCCCCEEEccCCcCCC-CCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCE
Q 043720 178 FESLEVLNLAGNQVKG-VIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRT 256 (1103)
Q Consensus 178 l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 256 (1103)
+++|++|+|++|.+++ ..|..++++++|++|++++|++.+.+|...+..+++|++|++++|++++.+|..++.+++|++
T Consensus 97 l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 176 (549)
T 2z81_A 97 LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176 (549)
T ss_dssp CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred CCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCce
Confidence 9999999999999997 367789999999999999999666787654455688999999999999999999999999999
Q ss_pred EeCCCccCCccccccccCCCCCCEEEccCCcCCCcC--C-ccccCCCCCCeEecccCcCccccCccccCcccccccCCCC
Q 043720 257 LLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLI--P-TELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASN 333 (1103)
Q Consensus 257 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~--p-~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 333 (1103)
|+++.|.++......+..+++|++|++++|++++.. | .....+++|+.|++++
T Consensus 177 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~------------------------ 232 (549)
T 2z81_A 177 LTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRG------------------------ 232 (549)
T ss_dssp EEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEES------------------------
T ss_pred EecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccc------------------------
Confidence 999999987643333467999999999999999742 2 2335678899999985
Q ss_pred CCCCccccc----CchhhhccccccccccCCccccccC------CccccccccCcEEEcCCccccccc-----chhhhcc
Q 043720 334 GEKNSFIGS----IPMEITTLSKLRIIWAPRLNLEGKL------PSSWGACESLEMLNLAQNVLRGDL-----IGVFDRC 398 (1103)
Q Consensus 334 ~~~n~~~~~----ip~~~~~L~~L~~L~l~~n~l~~~~------p~~~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~l 398 (1103)
+.+.+. ++..+..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+.... +..+..+
T Consensus 233 ---n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~ 309 (549)
T 2z81_A 233 ---SVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLL 309 (549)
T ss_dssp ---CEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHS
T ss_pred ---cccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhc
Confidence 334443 3334456677888888888776632 123456677777777777665421 2233445
Q ss_pred CCceEeecCCccccccccccc-cccceeEEEecCCccccc
Q 043720 399 KKLHFIDLSSNELSGELDVKL-QVPCMALFDVSGNHMSGS 437 (1103)
Q Consensus 399 ~~L~~LdLs~N~l~~~~~~~~-~~~~L~~l~ls~N~l~g~ 437 (1103)
++|+.|++++|+++..+.... .+++|+.|++++|++++.
T Consensus 310 ~~L~~L~l~~n~l~~ip~~~~~~l~~L~~L~Ls~N~l~~~ 349 (549)
T 2z81_A 310 EKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEE 349 (549)
T ss_dssp TTCCEEEEESSCCCCCCHHHHHHCTTCCEEECCSSCCCHH
T ss_pred ccceEEEeccCccccCCHHHHhcCccccEEEccCCccccc
Confidence 667777777776653222221 456666666666665543
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.8e-48 Score=472.20 Aligned_cols=505 Identities=19% Similarity=0.183 Sum_probs=374.3
Q ss_pred cccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCC
Q 043720 97 GKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLR 176 (1103)
Q Consensus 97 g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 176 (1103)
..+|..+. +.+++|+|++|.+++..+..|.++++|++|||++|++++..|..|+++++|++|+|++|++++..|..|+
T Consensus 20 ~~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 97 (570)
T 2z63_A 20 YKIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 97 (570)
T ss_dssp SSCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT
T ss_pred cccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhc
Confidence 35665443 5789999999999988888899999999999999999977778899999999999999999877778899
Q ss_pred CCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCC-CCChhHHhhcCcCcEEECcCCccccccCccccCCCCC-
Q 043720 177 NFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNG-SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQL- 254 (1103)
Q Consensus 177 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g-~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L- 254 (1103)
++++|++|++++|++++..+..++++++|++|++++|.+++ .+|..+.. +++|++|++++|++++..+..++.+++|
T Consensus 98 ~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 176 (570)
T 2z63_A 98 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN-LTNLEHLDLSSNKIQSIYCTDLRVLHQMP 176 (570)
T ss_dssp TCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGG-CTTCCEEECTTSCCCEECGGGGHHHHTCT
T ss_pred CccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcc-cCCCCEEeCcCCccceecHHHccchhccc
Confidence 99999999999999987666678899999999999999985 47887776 4789999999999988777888888888
Q ss_pred ---CEEeCCCccCCccccccccCCCCCCEEEccCCcCCC-cCCccccCCCCCCeEecccCcCccccCccccCcccccccC
Q 043720 255 ---RTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNG-LIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSD 330 (1103)
Q Consensus 255 ---~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~ 330 (1103)
+.|++++|.+++..|..+..+ +|+.|++++|.... .++..+..+++++.+.+...... .
T Consensus 177 ~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~--------~-------- 239 (570)
T 2z63_A 177 LLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR--------N-------- 239 (570)
T ss_dssp TCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECC--------C--------
T ss_pred hhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeecccccc--------C--------
Confidence 889999999998877777765 79999999886543 45667778888877666421000 0
Q ss_pred CCCCCCCcccccCchhhhccc--cccccccCCc-cccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecC
Q 043720 331 ASNGEKNSFIGSIPMEITTLS--KLRIIWAPRL-NLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLS 407 (1103)
Q Consensus 331 ~~~~~~n~~~~~ip~~~~~L~--~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 407 (1103)
...+...-...+..+. .++.+++.++ .+.+..|..+..+++|+.|++++|.+.+ +|..+..+ +|+.|+++
T Consensus 240 -----~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~ 312 (570)
T 2z63_A 240 -----EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELV 312 (570)
T ss_dssp -----CSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEE
T ss_pred -----chhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeec
Confidence 0011111111222222 2556666666 6777888888888889999998888884 56667777 88888888
Q ss_pred CccccccccccccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccc
Q 043720 408 SNELSGELDVKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARF 487 (1103)
Q Consensus 408 ~N~l~~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (1103)
+|++. .+|. ..+++|+.|++++|.+.+.++.. .++.
T Consensus 313 ~n~~~-~l~~-~~l~~L~~L~l~~n~~~~~~~~~------------------------------------------~~~~ 348 (570)
T 2z63_A 313 NCKFG-QFPT-LKLKSLKRLTFTSNKGGNAFSEV------------------------------------------DLPS 348 (570)
T ss_dssp SCBCS-SCCB-CBCSSCCEEEEESCBSCCBCCCC------------------------------------------BCTT
T ss_pred cCccc-ccCc-ccccccCEEeCcCCccccccccc------------------------------------------cCCC
Confidence 88887 4443 46788888888888876544320 1112
Q ss_pred eEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccC--Cchhhhc
Q 043720 488 MVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHI--PLDIGVM 565 (1103)
Q Consensus 488 l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~i--p~~~~~~ 565 (1103)
|. .+++++|++.+.. |..+...
T Consensus 349 L~--------------------------------------------------------~L~l~~n~l~~~~~~~~~~~~~ 372 (570)
T 2z63_A 349 LE--------------------------------------------------------FLDLSRNGLSFKGCCSQSDFGT 372 (570)
T ss_dssp CC--------------------------------------------------------EEECCSSCCBEEEEEEHHHHTC
T ss_pred CC--------------------------------------------------------EEeCcCCccCcccccccccccc
Confidence 22 4555555555332 3444433
Q ss_pred CCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCC-cccccCccCcEEeccCcccCCCCCCcccCCCCCcEE
Q 043720 566 CKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIP-SSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVL 644 (1103)
Q Consensus 566 ~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 644 (1103)
++|++|++++|.+++..+. +..+++|++|++++|.+.+..| ..+..+++|++|+|++|++++..|..|.++++|++|
T Consensus 373 -~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 373 -TSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp -SCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred -CccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 7788888888887754443 7777888888888887776554 467777888888888888877777777778888888
Q ss_pred eccCcccc-CcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCc---cccccccccCCCC
Q 043720 645 ELSSNSLS-GEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNV---TTMNCSGVIGNPF 720 (1103)
Q Consensus 645 ~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~---~~~~~~~l~~Np~ 720 (1103)
+|++|+++ +.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|++++.+|..+ ..+..+++.+|||
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~ 530 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPW 530 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcc
Confidence 88888876 4577777778888888888888877777777778888888888888877766543 4556667889999
Q ss_pred CCCCCCCCCC
Q 043720 721 LDPCQMYKDI 730 (1103)
Q Consensus 721 ~c~C~~~~~~ 730 (1103)
.|+|+...+.
T Consensus 531 ~~~~~~~~~~ 540 (570)
T 2z63_A 531 DCSCPRIDYL 540 (570)
T ss_dssp CCCTTTTHHH
T ss_pred cCCCcchHHH
Confidence 9999876544
No 18
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.3e-49 Score=442.99 Aligned_cols=271 Identities=24% Similarity=0.354 Sum_probs=224.2
Q ss_pred CCCHHHHHHHhcCCCCcceeccCCcccEEEEEEcC------CcEEEEEEcccccchhhHHHHHHHHHHHhcCCC-CceeE
Q 043720 810 PLTYESIIRATGDFNTSNCIGSGGFGTTYKAEISP------GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRH-PNLVT 882 (1103)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~ 882 (1103)
|+...+++...++|++.+.||+|+||+||+|.+.. ++.||||++.........+.|.+|+.+++++.| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 34444455556789999999999999999997653 367999999877766677889999999999965 99999
Q ss_pred EEeEEec-CCeEEEEEeecCCCChHHHHHhhcC--------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccC
Q 043720 883 LIGYRAS-GNEMFLIYNYLPGGNLENFIKARTS--------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHR 947 (1103)
Q Consensus 883 l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~ 947 (1103)
++|+|.+ ++.+|+|||||++|+|.++++.... ..+++.++..++.|||+||+|||++ +||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 9999966 4678999999999999999986432 3489999999999999999999999 99999
Q ss_pred CCCCCcEEECCCCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 043720 948 DVKPSNILLDDDFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALD 1025 (1103)
Q Consensus 948 Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~ 1025 (1103)
||||+|||+++++.+||+|||+|+........ ......||++|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999876544333 3445678999999999999999999999999999999998 899986
Q ss_pred CCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1026 PSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.... .......+..+ .+...+..+++++.++|.+||+.||++||||+||+++|+++.+
T Consensus 290 ~~~~--------~~~~~~~i~~g---------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 290 GVKI--------DEEFCRRLKEG---------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp TCCC--------SHHHHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCH--------HHHHHHHHHcC---------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 3221 11122222222 2234456677889999999999999999999999999999754
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.1e-48 Score=435.14 Aligned_cols=252 Identities=23% Similarity=0.396 Sum_probs=208.7
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
++|++.+.||+|+||+||+|+.. +|+.||||++..... ....+.+.+|+.++++++|||||++++++.+.+.+|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 58999999999999999999764 689999999976543 3456789999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
||++|+|.++++......+++.+++.|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+..... .
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~ 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-V 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-H
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC-c
Confidence 99999999999877666789999999999999999999999 9999999999999999999999999999876422 1
Q ss_pred ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 979 HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+.... .
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~-~-------- 242 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--------MKNLVLKIISGS-F-------- 242 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTC-C--------
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcCC-C--------
Confidence 22345679999999999999999999999999999999999999997321 222222222221 1
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+.++.++|.+||+.||++|||++|++++
T Consensus 243 -~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 243 -PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 12234566789999999999999999999999874
No 20
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-46 Score=480.03 Aligned_cols=498 Identities=21% Similarity=0.166 Sum_probs=408.7
Q ss_pred ccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCc-cccccCCCCCCEEEccccccCCCCCCCCC
Q 043720 98 KLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRL-PNEFVGLRNLRVLNLAFNRIDGDIPFSLR 176 (1103)
Q Consensus 98 ~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 176 (1103)
.+|. ..++|++|+|++|.+++..|..|.++++|++|||++|.+.+.+ |..|+++++|++|+|++|++++..|..|+
T Consensus 18 ~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~ 94 (844)
T 3j0a_A 18 QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ 94 (844)
T ss_dssp CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC
T ss_pred CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc
Confidence 3555 4579999999999999999999999999999999999777777 78899999999999999999988899999
Q ss_pred CCCCCCEEEccCCcCCCCCChh--cccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCC--C
Q 043720 177 NFESLEVLNLAGNQVKGVIPGF--LGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKC--Q 252 (1103)
Q Consensus 177 ~l~~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l--~ 252 (1103)
++++|++|+|++|.+++.+|.. |+++++|++|+|++|.+++..+...+..+++|++|+|++|.+++..+..++.+ +
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~ 174 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGK 174 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHC
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCC
Confidence 9999999999999999877765 99999999999999999966554444456889999999999999889999888 8
Q ss_pred CCCEEeCCCccCCccccccccCCCC------CCEEEccCCcCCCcCCccccCC---CCCCeEecccCcCccccCccccCc
Q 043720 253 QLRTLLLFSNMLNDVIPRELGWLRK------LEVLDVSRNRLNGLIPTELGNC---VELSVLVLSNLFDPLLSGRNIRGE 323 (1103)
Q Consensus 253 ~L~~L~L~~N~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~l~~~~~~~l~~~~~~~~ 323 (1103)
+|+.|++++|.+++..|..++.+.+ |+.|++++|.+++.+|..+... .++..|.++++....
T Consensus 175 ~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~--------- 245 (844)
T 3j0a_A 175 TLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGA--------- 245 (844)
T ss_dssp SSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBC---------
T ss_pred ccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccc---------
Confidence 9999999999999988887777665 9999999999999888887654 567777776322110
Q ss_pred ccccccCCCCCCCCcccccCchhhhcc--ccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCc
Q 043720 324 LSVGQSDASNGEKNSFIGSIPMEITTL--SKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKL 401 (1103)
Q Consensus 324 ~~~~~~~~~~~~~n~~~~~ip~~~~~L--~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 401 (1103)
....+++.+..+..+..+ ++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..+..|.++++|
T Consensus 246 ---------~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 316 (844)
T 3j0a_A 246 ---------GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNL 316 (844)
T ss_dssp ---------SSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSC
T ss_pred ---------cccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCC
Confidence 001122333333444443 789999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCcccccccc-ccccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchh
Q 043720 402 HFIDLSSNELSGELD-VKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPL 480 (1103)
Q Consensus 402 ~~LdLs~N~l~~~~~-~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1103)
++|+|++|++++..+ .+..+++|+.|++++|++++..+..
T Consensus 317 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~--------------------------------------- 357 (844)
T 3j0a_A 317 QVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQT--------------------------------------- 357 (844)
T ss_dssp CEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSC---------------------------------------
T ss_pred CEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhh---------------------------------------
Confidence 999999999987755 4457889999999999886433321
Q ss_pred hhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCc
Q 043720 481 LVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPL 560 (1103)
Q Consensus 481 ~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~ 560 (1103)
+..++. +..|++++|.+. .++.
T Consensus 358 -~~~l~~--------------------------------------------------------L~~L~Ls~N~l~-~i~~ 379 (844)
T 3j0a_A 358 -FKFLEK--------------------------------------------------------LQTLDLRDNALT-TIHF 379 (844)
T ss_dssp -SCSCCC--------------------------------------------------------CCEEEEETCCSC-CCSS
T ss_pred -hcCCCC--------------------------------------------------------CCEEECCCCCCC-cccC
Confidence 011111 235677777776 3333
Q ss_pred hhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCC-CcccccCccCcEEeccCcccCCCCCC-cccCC
Q 043720 561 DIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEI-PSSLHRLKYLRHLSLADNNLTGGIPS-SIGEL 638 (1103)
Q Consensus 561 ~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l 638 (1103)
+++|+.|++++|+++ .+|.. ..+++.|++++|++++.. +..+..+++|+.|+|++|++++..+. .+..+
T Consensus 380 -----~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 450 (844)
T 3j0a_A 380 -----IPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSEN 450 (844)
T ss_dssp -----CCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSC
T ss_pred -----CCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccC
Confidence 488999999999999 44543 568999999999999532 22456899999999999999965543 46678
Q ss_pred CCCcEEeccCcccc-----CcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCc-ccccc
Q 043720 639 RSLEVLELSSNSLS-----GEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNV-TTMNC 712 (1103)
Q Consensus 639 ~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~-~~~~~ 712 (1103)
++|++|+|++|.++ +..+..|..+++|+.|+|++|+|++.+|..|..+++|+.|++++|+|++.+|..+ ..+..
T Consensus 451 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~ 530 (844)
T 3j0a_A 451 PSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEI 530 (844)
T ss_dssp TTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCE
T ss_pred CccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccE
Confidence 99999999999997 3445678899999999999999999999999999999999999999999887654 46777
Q ss_pred ccccCCCCCC
Q 043720 713 SGVIGNPFLD 722 (1103)
Q Consensus 713 ~~l~~Np~~c 722 (1103)
+++.+|....
T Consensus 531 L~Ls~N~l~~ 540 (844)
T 3j0a_A 531 LDISRNQLLA 540 (844)
T ss_dssp EEEEEECCCC
T ss_pred EECCCCcCCC
Confidence 8888887754
No 21
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-47 Score=427.83 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=210.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
..|+..+.||+|+||+||+|... +|+.||||++...... ..+.+.+|+.++++++|||||++++++.+.+.+|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 46888999999999999999765 6899999999765433 346688999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
|++|+|.++++.. .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+... ..
T Consensus 153 ~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-~~ 225 (346)
T 4fih_A 153 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VP 225 (346)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-SC
T ss_pred CCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC-CC
Confidence 9999999999764 399999999999999999999999 9999999999999999999999999999876433 23
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELW 1059 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1103)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+. .... ..
T Consensus 226 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~-~~~~-------~~ 289 (346)
T 4fih_A 226 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIR-DNLP-------PR 289 (346)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHH-HSSC-------CC
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHH-cCCC-------CC
Confidence 3456789999999999999999999999999999999999999997321 111122211 1110 11
Q ss_pred CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1060 ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1060 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.......+.++.++|.+||+.||++|||++|++++
T Consensus 290 ~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 290 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12234566789999999999999999999999875
No 22
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.1e-46 Score=468.20 Aligned_cols=525 Identities=18% Similarity=0.157 Sum_probs=368.8
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
+.+++|+|++|.|++..|.+|.++++|++|||++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999777788999999999999999999777778999999999999999999666677999999999999
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCCC-CChhHHhhcCcCcEEECcCCccccccCccccCCCCCC----EEeCCC
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNGS-IPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLR----TLLLFS 261 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~-ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~ 261 (1103)
++|++++..+..|+++++|++|+|++|++++. +|..+.. +++|++|+|++|++++..+..+..+.+++ .++++.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN-LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGG-CTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhcc-chhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 99999987778899999999999999999753 5555554 57899999999999988888887665544 688999
Q ss_pred ccCCccccccccCCCCCCEEEccCCcCCCc-CCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCccc
Q 043720 262 NMLNDVIPRELGWLRKLEVLDVSRNRLNGL-IPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFI 340 (1103)
Q Consensus 262 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~ 340 (1103)
|.++...+..+ ....++.+++++|..... .+..+..+..++...+..+.... ...+.
T Consensus 211 n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~---------------------~~~l~ 268 (635)
T 4g8a_A 211 NPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRN---------------------EGNLE 268 (635)
T ss_dssp CCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTT---------------------SCCCS
T ss_pred CcccccCcccc-cchhhhhhhhhcccccccccchhhcCCccccccccccccccc---------------------ccccc
Confidence 99988555444 445678899998876643 34556777777776664211100 01111
Q ss_pred ccCchhhhccccccccccCCcc---ccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccc
Q 043720 341 GSIPMEITTLSKLRIIWAPRLN---LEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDV 417 (1103)
Q Consensus 341 ~~ip~~~~~L~~L~~L~l~~n~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~ 417 (1103)
...+..+..+..+....+..+. .....+..+..+.+++.+++.+|.+.... .+....+|+.|++++|.+.+..+
T Consensus 269 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~- 345 (635)
T 4g8a_A 269 KFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT- 345 (635)
T ss_dssp CCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC-
T ss_pred cccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc-
Confidence 1112222333333333332221 11223344555666666666666655433 24445566666666666654322
Q ss_pred cccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCc
Q 043720 418 KLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNN 497 (1103)
Q Consensus 418 ~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~ 497 (1103)
..+..|+.+++++|...+..+. ..+..+..+++++|.
T Consensus 346 -~~l~~L~~l~l~~n~~~~~~~~------------------------------------------~~l~~L~~L~ls~n~ 382 (635)
T 4g8a_A 346 -LKLKSLKRLTFTSNKGGNAFSE------------------------------------------VDLPSLEFLDLSRNG 382 (635)
T ss_dssp -CBCTTCCEEEEESCCSCCBCCC------------------------------------------CBCTTCCEEECCSSC
T ss_pred -ccchhhhhcccccccCCCCccc------------------------------------------ccccccccchhhccc
Confidence 2345566666666655432211 012234455556555
Q ss_pred cccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCccEEECcCC
Q 043720 498 FTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHN 577 (1103)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N 577 (1103)
+.... ..|... ........++++.|.+.+ ++..+.. +++|+.++++.|
T Consensus 383 l~~~~---------------------------~~~~~~---~~~~~L~~L~~~~~~~~~-~~~~~~~-l~~L~~l~l~~~ 430 (635)
T 4g8a_A 383 LSFKG---------------------------CCSQSD---FGTISLKYLDLSFNGVIT-MSSNFLG-LEQLEHLDFQHS 430 (635)
T ss_dssp CBEEE---------------------------ECCHHH---HSCSCCCEEECCSCSEEE-ECSCCTT-CTTCCEEECTTS
T ss_pred ccccc---------------------------ccccch---hhhhhhhhhhcccccccc-ccccccc-cccccchhhhhc
Confidence 54211 001111 111223456777777663 3344443 378888888888
Q ss_pred cCCCCCc-ccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccC-CCCCCcccCCCCCcEEeccCccccCcC
Q 043720 578 QISGIVP-QSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLT-GGIPSSIGELRSLEVLELSSNSLSGEV 655 (1103)
Q Consensus 578 ~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 655 (1103)
++....+ ..|..+++++.+++++|.+.+..+..+..++.|+.|+|++|++. +.+|..|..+++|++|+|++|+|++..
T Consensus 431 ~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~ 510 (635)
T 4g8a_A 431 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 510 (635)
T ss_dssp EEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcC
Confidence 7765443 56778888888888888888777888888888888888888754 457788888888888888888888888
Q ss_pred hhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCcc----ccccccccCCCCCCCCCCCCCCC
Q 043720 656 PEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNVT----TMNCSGVIGNPFLDPCQMYKDIS 731 (1103)
Q Consensus 656 ~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~----~~~~~~l~~Np~~c~C~~~~~~~ 731 (1103)
|..|..+++|++|+|++|+|++..|..|..+++|++||+++|+|++.+|..+. .+..+++.+|||.|||++..+..
T Consensus 511 ~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~ 590 (635)
T 4g8a_A 511 PTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQ 590 (635)
T ss_dssp TTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHH
T ss_pred hHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHH
Confidence 88888888888888888888877788888888888888888888888876543 45667899999999999876655
Q ss_pred C
Q 043720 732 S 732 (1103)
Q Consensus 732 ~ 732 (1103)
|
T Consensus 591 w 591 (635)
T 4g8a_A 591 W 591 (635)
T ss_dssp H
T ss_pred H
Confidence 4
No 23
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.1e-47 Score=423.72 Aligned_cols=273 Identities=23% Similarity=0.298 Sum_probs=206.2
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC----eEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN----EMFLI 896 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lV 896 (1103)
.+|.+.+.||+|+||+||+|++. |+.||||++...... ...++.|+..+.+++|||||+++|++.+.+ .+|+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~--~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER--SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh--hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 35778899999999999999885 899999998654322 233456777778899999999999997653 68999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC-----CCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQC-----APRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
||||++|+|.++++... ++++.+.+++.|+++||+|||+++ .++|+||||||+|||++.++.+||+|||+|+
T Consensus 80 ~Ey~~~gsL~~~l~~~~---l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCCCCcHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 99999999999998653 899999999999999999999762 4589999999999999999999999999998
Q ss_pred ccCCCCCc---cccCCcccccccCccccccC------CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC------cc
Q 043720 972 LLGTSETH---ATTGVAGTFGYVAPEYALTC------RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDG------FN 1036 (1103)
Q Consensus 972 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~------~~ 1036 (1103)
........ .....+||++|||||++.+. .++.++|||||||++|||+||+.||.......... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 76443322 23346799999999998754 46779999999999999999998875432211110 01
Q ss_pred hHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1037 IISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
.................+... ....+++..+.+++.+||+.||++||||+||++.|++|.++.
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNR---WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGG---GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHhcccCCCCCCcc---ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 111111111111111111111 113356778999999999999999999999999999997653
No 24
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=5.8e-47 Score=474.10 Aligned_cols=400 Identities=17% Similarity=0.235 Sum_probs=303.7
Q ss_pred CcCCCCCChhcccCCCCcEeecccccCCC-CCChhHHhhcCcCcEEECcCCccccccCcccc--CCCCCCEEeCCCccCC
Q 043720 189 NQVKGVIPGFLGSFLKLRVLFLSYNELNG-SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLG--KCQQLRTLLLFSNMLN 265 (1103)
Q Consensus 189 n~l~~~~p~~l~~l~~L~~L~L~~N~l~g-~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~ 265 (1103)
|++++ +|..|+++++|++|+|++|+++| .+|..+ +.++.|.++|.+|..++ ++++|++|+|++|.+.
T Consensus 435 N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~---------~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~ 504 (876)
T 4ecn_A 435 NRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDW---------EDANSDYAKQYENEELSWSNLKDLTDVELYNCPNM 504 (876)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSC---------SCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTC
T ss_pred Ccccc-hhHHHhcCCCCCEEECcCCcCCCCcccccc---------cccccccccccCChhhhhccCCCCCEEECcCCCCC
Confidence 55555 56566666666666666666664 122111 01122334446788877 8888888888888888
Q ss_pred ccccccccCCCCCCEEEccCCc-CCC-cCCccccCCC-------CCCeEecccCcCccccCccccCcccccccCCCCCCC
Q 043720 266 DVIPRELGWLRKLEVLDVSRNR-LNG-LIPTELGNCV-------ELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEK 336 (1103)
Q Consensus 266 ~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~l~~l~-------~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 336 (1103)
+.+|..|+++++|+.|+|++|+ ++| .+|..+++++ +|+.|++++
T Consensus 505 ~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~--------------------------- 557 (876)
T 4ecn_A 505 TQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGY--------------------------- 557 (876)
T ss_dssp CSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCS---------------------------
T ss_pred ccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeC---------------------------
Confidence 8888888888888888888887 777 7777666665 888888874
Q ss_pred CcccccCch--hhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCC-ceEeecCCccccc
Q 043720 337 NSFIGSIPM--EITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKK-LHFIDLSSNELSG 413 (1103)
Q Consensus 337 n~~~~~ip~--~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~LdLs~N~l~~ 413 (1103)
|.+. .+|. .++++++|+.|++++|.+. .+| .|+.+++|+.|+|++|+++ .+|..+.++++ |+.|+|++|+++
T Consensus 558 N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~- 632 (876)
T 4ecn_A 558 NNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK- 632 (876)
T ss_dssp SCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-
T ss_pred CcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-
Confidence 4445 6777 7888888888888888888 777 8889999999999999998 67778888988 999999999988
Q ss_pred cccccc-cc--cceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEE
Q 043720 414 ELDVKL-QV--PCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVI 490 (1103)
Q Consensus 414 ~~~~~~-~~--~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 490 (1103)
.+|... .. ++|+.|++++|+++|.+|.+....
T Consensus 633 ~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l--------------------------------------------- 667 (876)
T 4ecn_A 633 YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSM--------------------------------------------- 667 (876)
T ss_dssp SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCT---------------------------------------------
T ss_pred cCchhhhccccCCCCEEECcCCcCCCccccchhhh---------------------------------------------
Confidence 455443 33 349999999999998777542000
Q ss_pred EecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCcc
Q 043720 491 HNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLR 570 (1103)
Q Consensus 491 ~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~ 570 (1103)
.......+..|+|++|++. .+|..++..+++|+
T Consensus 668 ----------------------------------------------~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~ 700 (876)
T 4ecn_A 668 ----------------------------------------------DDYKGINASTVTLSYNEIQ-KFPTELFATGSPIS 700 (876)
T ss_dssp ----------------------------------------------TTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCS
T ss_pred ----------------------------------------------ccccCCCcCEEEccCCcCC-ccCHHHHccCCCCC
Confidence 0000012346788888888 78888887678999
Q ss_pred EEECcCCcCCCCCcccccC-C-------CCCCEEEccCCcCCCCCCcccc--cCccCcEEeccCcccCCCCCCcccCCCC
Q 043720 571 VLDASHNQISGIVPQSLEN-L-------TSLVFLDLNGNKLQGEIPSSLH--RLKYLRHLSLADNNLTGGIPSSIGELRS 640 (1103)
Q Consensus 571 ~L~L~~N~l~~~~p~~~~~-l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 640 (1103)
+|+|++|+|+ .+|..+.. . ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..+++
T Consensus 701 ~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~ 777 (876)
T 4ecn_A 701 TIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQ 777 (876)
T ss_dssp EEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTT
T ss_pred EEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCC
Confidence 9999999999 44544333 2 38999999999999 7888887 99999999999999996 7889999999
Q ss_pred CcEEeccC------ccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCcc---ccc
Q 043720 641 LEVLELSS------NSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNVT---TMN 711 (1103)
Q Consensus 641 L~~L~Ls~------N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~---~~~ 711 (1103)
|+.|+|++ |++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.||+++|++....+..+. ...
T Consensus 778 L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~ 854 (876)
T 4ecn_A 778 LKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAG 854 (876)
T ss_dssp CCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTT
T ss_pred CCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccch
Confidence 99999976 888889999999999999999999999 58888765 6999999999999876554332 234
Q ss_pred cccccCCCCCC--CCCCCC
Q 043720 712 CSGVIGNPFLD--PCQMYK 728 (1103)
Q Consensus 712 ~~~l~~Np~~c--~C~~~~ 728 (1103)
...+.+|++.| .|+..+
T Consensus 855 ~~~L~~n~~~~I~gC~~L~ 873 (876)
T 4ecn_A 855 MYVLLYDKTQDIRGCDALG 873 (876)
T ss_dssp CCEEECCTTSEEESCGGGC
T ss_pred heeecCCCccccCCCCCcc
Confidence 45688999987 887644
No 25
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-46 Score=459.71 Aligned_cols=482 Identities=21% Similarity=0.211 Sum_probs=396.9
Q ss_pred ccccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCC
Q 043720 94 KLVGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPF 173 (1103)
Q Consensus 94 ~~~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 173 (1103)
.+.+..+..++++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+.
T Consensus 39 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~ 118 (570)
T 2z63_A 39 PLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENF 118 (570)
T ss_dssp CCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTC
T ss_pred ccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCc
Confidence 34444455799999999999999999988888999999999999999999987889999999999999999999965556
Q ss_pred CCCCCCCCCEEEccCCcCCC-CCChhcccCCCCcEeecccccCCCCCChhHHhhcCcC----cEEECcCCccccccCccc
Q 043720 174 SLRNFESLEVLNLAGNQVKG-VIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYL----EHLDLSGNSLVGRIPSSL 248 (1103)
Q Consensus 174 ~l~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L----~~L~L~~N~l~~~~p~~l 248 (1103)
.++++++|++|++++|.+++ .+|..|+++++|++|++++|++++..|..+.. +++| ++|++++|.+++..|..+
T Consensus 119 ~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~~~~~L~l~~n~l~~~~~~~~ 197 (570)
T 2z63_A 119 PIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV-LHQMPLLNLSLDLSLNPMNFIQPGAF 197 (570)
T ss_dssp SCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHH-HHTCTTCCCEEECTTCCCCEECTTTT
T ss_pred cccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccc-hhccchhhhhcccCCCCceecCHHHh
Confidence 89999999999999999997 47999999999999999999999655666655 4667 899999999998888777
Q ss_pred cCCCCCCEEeCCCccCCc-cccccccCCCCCCEEEccCCcCCC------cCCccccCCCCC--CeEecccCcCccccCcc
Q 043720 249 GKCQQLRTLLLFSNMLND-VIPRELGWLRKLEVLDVSRNRLNG------LIPTELGNCVEL--SVLVLSNLFDPLLSGRN 319 (1103)
Q Consensus 249 ~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~------~~p~~l~~l~~L--~~L~l~~~~~~~l~~~~ 319 (1103)
..+ +|+.|++++|.... .++..+..+++++.+.+..+.+.. .....+..+.++ +.+++++
T Consensus 198 ~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~---------- 266 (570)
T 2z63_A 198 KEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY---------- 266 (570)
T ss_dssp TTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE----------
T ss_pred ccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc----------
Confidence 766 89999999986543 356778888888887765443321 222233333333 3344432
Q ss_pred ccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccC
Q 043720 320 IRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCK 399 (1103)
Q Consensus 320 ~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 399 (1103)
...+.+.+|..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|.+...+. ..++
T Consensus 267 ----------------~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~---~~l~ 325 (570)
T 2z63_A 267 ----------------LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPT---LKLK 325 (570)
T ss_dssp ----------------TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCB---CBCS
T ss_pred ----------------chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCc---cccc
Confidence 12567788999999999999999999998 588889888 99999999999995443 4789
Q ss_pred CceEeecCCccccccccccccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCch
Q 043720 400 KLHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMP 479 (1103)
Q Consensus 400 ~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1103)
+|+.|++++|.+.+..+. ..+++|+.|++++|++++... .+
T Consensus 326 ~L~~L~l~~n~~~~~~~~-~~~~~L~~L~l~~n~l~~~~~--------------------------------------~~ 366 (570)
T 2z63_A 326 SLKRLTFTSNKGGNAFSE-VDLPSLEFLDLSRNGLSFKGC--------------------------------------CS 366 (570)
T ss_dssp SCCEEEEESCBSCCBCCC-CBCTTCCEEECCSSCCBEEEE--------------------------------------EE
T ss_pred ccCEEeCcCCcccccccc-ccCCCCCEEeCcCCccCcccc--------------------------------------cc
Confidence 999999999999887666 788999999999999874310 01
Q ss_pred hhhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCC
Q 043720 480 LLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIP 559 (1103)
Q Consensus 480 ~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip 559 (1103)
..+..++.| +.+++++|++.+ +|
T Consensus 367 ~~~~~~~~L--------------------------------------------------------~~L~l~~n~l~~-~~ 389 (570)
T 2z63_A 367 QSDFGTTSL--------------------------------------------------------KYLDLSFNGVIT-MS 389 (570)
T ss_dssp HHHHTCSCC--------------------------------------------------------CEEECCSCSEEE-EE
T ss_pred ccccccCcc--------------------------------------------------------CEEECCCCcccc-cc
Confidence 111122222 356666776663 34
Q ss_pred chhhhcCCCccEEECcCCcCCCCCc-ccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccC-CCCCCcccC
Q 043720 560 LDIGVMCKSLRVLDASHNQISGIVP-QSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLT-GGIPSSIGE 637 (1103)
Q Consensus 560 ~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~ 637 (1103)
..+.. +++|++|++++|.+++..| ..+.++++|++|++++|.+.+..|..|..+++|+.|+|++|+++ +.+|..|..
T Consensus 390 ~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~ 468 (570)
T 2z63_A 390 SNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE 468 (570)
T ss_dssp EEEET-CTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred ccccc-cCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhc
Confidence 44443 4899999999999997766 57899999999999999999888999999999999999999998 578999999
Q ss_pred CCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCC
Q 043720 638 LRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPW 705 (1103)
Q Consensus 638 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~ 705 (1103)
+++|++|+|++|++++..|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|++++..|.
T Consensus 469 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 469 LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999988899999999999999999999988888899999999999999999987764
No 26
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-47 Score=421.51 Aligned_cols=248 Identities=22% Similarity=0.346 Sum_probs=211.3
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|+.. +++.||||++.+... ....+.+.+|++++++++|||||++++++.+.+.+|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999664 689999999976532 334678999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++|+|.+++++.. .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999998754 499999999999999999999999 99999999999999999999999999999875433
Q ss_pred C-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 978 T-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 978 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+....
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~-------- 250 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EGLIFAKIIKLE-------- 250 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC--------
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC--------
Confidence 2 33456789999999999999999999999999999999999999997321 122222222211
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVV 1092 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 1092 (1103)
...+...+.++.++|.+||+.||++|||++|+.
T Consensus 251 ---~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 251 ---YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ---CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ---CCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 122345567899999999999999999999864
No 27
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.9e-47 Score=471.96 Aligned_cols=453 Identities=20% Similarity=0.202 Sum_probs=327.1
Q ss_pred CCCCEEEeecCCCCCCccccccCCCCCCEEEccccccC------C------CCCCCCCCCCCCCEEEccCCcCCCCCChh
Q 043720 131 EKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRID------G------DIPFSLRNFESLEVLNLAGNQVKGVIPGF 198 (1103)
Q Consensus 131 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~------~------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 198 (1103)
.+++.|+|++|.++|.+|++++.|++|++|+|++|.+. | .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 46889999999999999999999999999999999773 1 122211 22333 444444444444443
Q ss_pred ccc-CCCCcEeecccccCCCCCChhHHhhcCcCcEEEC--cCCccccccCccccCCCCCCEEeCCCccCCcc--------
Q 043720 199 LGS-FLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDL--SGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDV-------- 267 (1103)
Q Consensus 199 l~~-l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L--~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-------- 267 (1103)
++. +..+..+++....+... ....++.+.+ .+|+++| +|..++++++|++|+|++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~-------~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 229 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKS-------SRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCC-------CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred HHHHHHHHhhcCccccccccc-------cccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence 331 11111222221111100 0001122222 2577777 777788888888888888887775
Q ss_pred ---------cccccc--CCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCC
Q 043720 268 ---------IPRELG--WLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEK 336 (1103)
Q Consensus 268 ---------~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 336 (1103)
+|..++ ++++|++|+|++|++.+.+|..++++++|+.|++++
T Consensus 230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~--------------------------- 282 (636)
T 4eco_A 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVAC--------------------------- 282 (636)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTT---------------------------
T ss_pred cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcC---------------------------
Confidence 777777 788888888888888778888888888888888874
Q ss_pred Cc-ccc-cCchhhhcc------ccccccccCCccccccCCc--cccccccCcEEEcCCcccccccchhhhccCCceEeec
Q 043720 337 NS-FIG-SIPMEITTL------SKLRIIWAPRLNLEGKLPS--SWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDL 406 (1103)
Q Consensus 337 n~-~~~-~ip~~~~~L------~~L~~L~l~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdL 406 (1103)
|. +.| .+|..++.+ ++|+.|++++|++. .+|. .++++++|++|+|++|+++|.+| .|..+++|++|+|
T Consensus 283 n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L 360 (636)
T 4eco_A 283 NRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNL 360 (636)
T ss_dssp CTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEEC
T ss_pred CCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEEC
Confidence 44 666 677777776 77888888888777 6777 77788888888888888877666 7777788888888
Q ss_pred CCccccccccccccccc-eeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcc
Q 043720 407 SSNELSGELDVKLQVPC-MALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAA 485 (1103)
Q Consensus 407 s~N~l~~~~~~~~~~~~-L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (1103)
++|+++..+..+..+++ |+.|++++|+++ .+|.... .
T Consensus 361 ~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~----------------------------------------~- 398 (636)
T 4eco_A 361 AYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFD----------------------------------------A- 398 (636)
T ss_dssp CSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCC----------------------------------------T-
T ss_pred CCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhh----------------------------------------h-
Confidence 88887743344556777 777777777776 4553210 0
Q ss_pred cceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhh--
Q 043720 486 RFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIG-- 563 (1103)
Q Consensus 486 ~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~-- 563 (1103)
........+++++|++.+.+|..+.
T Consensus 399 -----------------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~l~~~ 425 (636)
T 4eco_A 399 -----------------------------------------------------KSVSVMSAIDFSYNEIGSVDGKNFDPL 425 (636)
T ss_dssp -----------------------------------------------------TCSSCEEEEECCSSCTTTTTTCSSCTT
T ss_pred -----------------------------------------------------cccCccCEEECcCCcCCCcchhhhccc
Confidence 0000123456666666666665554
Q ss_pred -----hcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCccccc-C-------ccCcEEeccCcccCCC
Q 043720 564 -----VMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHR-L-------KYLRHLSLADNNLTGG 630 (1103)
Q Consensus 564 -----~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l-------~~L~~L~L~~N~l~~~ 630 (1103)
.. ++|++|+|++|+|+++.+..+..+++|++|+|++|+++ .+|..+.. . ++|+.|+|++|+++ .
T Consensus 426 ~~~~~~~-~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 502 (636)
T 4eco_A 426 DPTPFKG-INVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-K 502 (636)
T ss_dssp CSSCCCC-CCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-B
T ss_pred ccccccC-CCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-c
Confidence 33 68999999999999665666778999999999999999 67664433 2 39999999999999 7
Q ss_pred CCCccc--CCCCCcEEeccCccccCcChhhhhhccccccccc------ccccCcCCCCccccCCCCCceEeCCCCCCCCC
Q 043720 631 IPSSIG--ELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLL------DNNKLSGHLPSGLANVTSLSIFNASFNNLSGP 702 (1103)
Q Consensus 631 ~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L------~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~ 702 (1103)
+|..+. .+++|++|+|++|+|++ +|..+..+++|+.|+| ++|++.+.+|..+..+++|+.|++++|++...
T Consensus 503 lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~i 581 (636)
T 4eco_A 503 LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKV 581 (636)
T ss_dssp CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBC
T ss_pred cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCcc
Confidence 888887 99999999999999997 8999999999999999 56888899999999999999999999999555
Q ss_pred CCCCccccccccccCCCCCC
Q 043720 703 FPWNVTTMNCSGVIGNPFLD 722 (1103)
Q Consensus 703 ~p~~~~~~~~~~l~~Np~~c 722 (1103)
+......+..+++.+||+.|
T Consensus 582 p~~~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 582 NEKITPNISVLDIKDNPNIS 601 (636)
T ss_dssp CSCCCTTCCEEECCSCTTCE
T ss_pred CHhHhCcCCEEECcCCCCcc
Confidence 44455678888999999987
No 28
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.8e-47 Score=425.71 Aligned_cols=252 Identities=21% Similarity=0.263 Sum_probs=207.8
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
+.|+..++||+|+||+||+|.+. +|+.||||+++..... .+|+.++++++|||||++++++.+++.+|+||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~------~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR------VEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC------THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH------HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45778889999999999999765 5899999999765332 3699999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC-CEEEeecccccccCCCCC
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF-NAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~ki~Dfgla~~~~~~~~ 978 (1103)
|++|+|.+++++.. .+++.++..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.......
T Consensus 132 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 99999999998754 499999999999999999999999 999999999999999987 699999999987754322
Q ss_pred c----cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 979 H----ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 979 ~----~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||...... ... ..+.....
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~-----~~~---~~i~~~~~----- 273 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRG-----PLC---LKIASEPP----- 273 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCS-----CCH---HHHHHSCC-----
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-----HHH---HHHHcCCC-----
Confidence 1 223457999999999999999999999999999999999999999743221 111 11111110
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
.....+..++..+.++|.+||+.||++|||++|++++|.+..
T Consensus 274 ---~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 274 ---PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp ---GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 011234566788999999999999999999999999988754
No 29
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-46 Score=410.19 Aligned_cols=248 Identities=23% Similarity=0.381 Sum_probs=199.5
Q ss_pred CCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEec----CCeEEEEE
Q 043720 824 NTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS----GNEMFLIY 897 (1103)
Q Consensus 824 ~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 897 (1103)
++.+.||+|+||+||+|.+. +++.||||++..... ....+.|.+|+.++++++|||||++++++.+ .+.+|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56678999999999999765 588999999976543 3456789999999999999999999999865 35689999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC-CCCEEEeecccccccCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD-DFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~ki~Dfgla~~~~~~ 976 (1103)
|||++|+|.+++++.. .+++..+..++.||+.||+|||++ .++|+||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 9999999999998754 489999999999999999999998 122999999999999984 78999999999986432
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... ....... +..+... .
T Consensus 185 --~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-------~~~~~~~-i~~~~~~----~ 249 (290)
T 3fpq_A 185 --SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRR-VTSGVKP----A 249 (290)
T ss_dssp --TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHH-HTTTCCC----G
T ss_pred --CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-------HHHHHHH-HHcCCCC----C
Confidence 23345689999999998865 699999999999999999999999963211 1111111 1111110 0
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..+...++++.++|.+||+.||++|||++|++++
T Consensus 250 ----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 250 ----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1122344678999999999999999999999874
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=456.53 Aligned_cols=458 Identities=20% Similarity=0.242 Sum_probs=293.0
Q ss_pred CEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCC
Q 043720 110 RVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGN 189 (1103)
Q Consensus 110 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 189 (1103)
++|++++|+++ .+|..+. ++|++|||++|.+++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46777777777 5776665 67777777777777666677777777777777777777666777777777777777777
Q ss_pred cCCCCCChhcccCCCCcEeecccccCCC-CCChhHHhhcCcCcEEECcCCccccccCccccCCCCC--CEEeCCCccC--
Q 043720 190 QVKGVIPGFLGSFLKLRVLFLSYNELNG-SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQL--RTLLLFSNML-- 264 (1103)
Q Consensus 190 ~l~~~~p~~l~~l~~L~~L~L~~N~l~g-~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l-- 264 (1103)
+++ .+|.. .+++|++|+|++|++++ .+|..++. +++|++|++++|++++ ..++.+++| +.|++++|.+
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~-l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGN-MSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGG-CTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhcc-CCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 777 34544 56677777777777664 35555554 3556666666666654 234555555 6666666666
Q ss_pred CccccccccCCC-CCCEEEccCCcCCCcCCc-cccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCccccc
Q 043720 265 NDVIPRELGWLR-KLEVLDVSRNRLNGLIPT-ELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGS 342 (1103)
Q Consensus 265 ~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ 342 (1103)
++..|..+..+. +...+++++|++.+.++. .+.++++|+.|+++
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~---------------------------------- 198 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIK---------------------------------- 198 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEE----------------------------------
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccc----------------------------------
Confidence 555555555443 223445555555544332 34445555555544
Q ss_pred CchhhhccccccccccCCcc-------ccccCCccccccccCcEEEcCCcccccccchhhh---ccCCceEeecCCcccc
Q 043720 343 IPMEITTLSKLRIIWAPRLN-------LEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFD---RCKKLHFIDLSSNELS 412 (1103)
Q Consensus 343 ip~~~~~L~~L~~L~l~~n~-------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~LdLs~N~l~ 412 (1103)
+|. +.+.+| .++.+++|+.|+|++|.+.+..+..+. .+++|++|++++|+++
T Consensus 199 -----------------~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~ 260 (520)
T 2z7x_B 199 -----------------CVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQ 260 (520)
T ss_dssp -----------------ECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEE
T ss_pred -----------------ccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeeccccc
Confidence 333 333333 455566666666666665543322211 1346666666666666
Q ss_pred cccccc------ccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhccc
Q 043720 413 GELDVK------LQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAAR 486 (1103)
Q Consensus 413 ~~~~~~------~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (1103)
+.+|.. ..++.|+.+++++|.+ .+|..
T Consensus 261 ~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~--------------------------------------------- 293 (520)
T 2z7x_B 261 GQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQS--------------------------------------------- 293 (520)
T ss_dssp SCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTH---------------------------------------------
T ss_pred CccccchhhcccccCceeEeccccccce--ecchh---------------------------------------------
Confidence 554433 3455666666666655 33310
Q ss_pred ceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcC
Q 043720 487 FMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMC 566 (1103)
Q Consensus 487 ~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~ 566 (1103)
.++..........+++++|++.+.. +...+
T Consensus 294 -----------------------------------------------~~~~~~~~~~L~~L~l~~n~l~~~~---~~~~l 323 (520)
T 2z7x_B 294 -----------------------------------------------YIYEIFSNMNIKNFTVSGTRMVHML---CPSKI 323 (520)
T ss_dssp -----------------------------------------------HHHHHHHTCCCSEEEEESSCCCCCC---CCSSC
T ss_pred -----------------------------------------------hhhcccccCceeEEEcCCCcccccc---chhhC
Confidence 0000001111234555555554221 11234
Q ss_pred CCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCC--CCCcccccCccCcEEeccCcccCCCCCC-cccCCCCCcE
Q 043720 567 KSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQG--EIPSSLHRLKYLRHLSLADNNLTGGIPS-SIGELRSLEV 643 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~ 643 (1103)
++|++|+|++|++++..|..+..+++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|. .+..+++|++
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~ 403 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLS 403 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCE
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCE
Confidence 778888888888887778888888888888888888875 4556778888888888888888864554 4777888888
Q ss_pred EeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCC---CccccccccccCCCC
Q 043720 644 LELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPW---NVTTMNCSGVIGNPF 720 (1103)
Q Consensus 644 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~---~~~~~~~~~l~~Np~ 720 (1103)
|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|++++|+|++.++. .+..+..+++.+|||
T Consensus 404 L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~ 480 (520)
T 2z7x_B 404 LNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPW 480 (520)
T ss_dssp EECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCC
Confidence 88888888776666553 67888888888888 6777777888888888888888865554 234566677999999
Q ss_pred CCCCCCCCC
Q 043720 721 LDPCQMYKD 729 (1103)
Q Consensus 721 ~c~C~~~~~ 729 (1103)
.|+|++..+
T Consensus 481 ~c~c~~~~~ 489 (520)
T 2z7x_B 481 DCSCPRIDY 489 (520)
T ss_dssp CCCHHHHHH
T ss_pred cccCCchHH
Confidence 999998554
No 31
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.2e-46 Score=408.52 Aligned_cols=247 Identities=25% Similarity=0.402 Sum_probs=194.9
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +|+.||||++..... ....+.+.+|+.++++++|||||++++++.+.+.+|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999764 689999999976533 234567999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+ +|+|.+++.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 999 689999998654 499999999999999999999999 9999999999999999999999999999865432
Q ss_pred CccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
......+||+.|||||++.+..| +.++||||+||++|||++|+.||... ........... +.
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~--------~~~~~~~~i~~-~~------- 228 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE--------SIPVLFKNISN-GV------- 228 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS--------SHHHHHHHHHH-TC-------
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC--------CHHHHHHHHHc-CC-------
Confidence 23345689999999999998876 57999999999999999999999732 11222222221 11
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...++++.+++.+||+.||++|||++|++++
T Consensus 229 ---~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 ---YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 12234456789999999999999999999999875
No 32
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.6e-46 Score=429.49 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=210.8
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
+.|+..+.||+|+||+||+|... +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+.+.+|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 46999999999999999999765 5899999999765433 346688999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
|++|+|.++++... +++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+... ..
T Consensus 230 ~~gG~L~~~i~~~~---l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~-~~ 302 (423)
T 4fie_A 230 LEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-VP 302 (423)
T ss_dssp CTTEEHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS-CC
T ss_pred CCCCcHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC-Cc
Confidence 99999999997643 99999999999999999999999 9999999999999999999999999999876433 23
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELW 1059 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1103)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.... .......+. .... . .
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~-~~~~-----~--~ 366 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--------PLKAMKMIR-DNLP-----P--R 366 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHH-HSCC-----C--C
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHH-cCCC-----C--C
Confidence 3456789999999999999999999999999999999999999997321 111122211 1110 0 1
Q ss_pred CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1060 ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1060 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.......+.++.+||.+||+.||++|||++|++++
T Consensus 367 ~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 367 LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 12234556789999999999999999999999875
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-46 Score=414.41 Aligned_cols=248 Identities=24% Similarity=0.325 Sum_probs=201.0
Q ss_pred cCCCCcceeccCCcccEEEEEEc----CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS----PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
++|++.+.||+|+||+||+|+.. .++.||||++..... ......+.+|+.++++++|||||++++++.+.+.+|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46999999999999999999753 468899999976532 2234568899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
|||||+||+|.+++++.. .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999998754 499999999999999999999999 999999999999999999999999999986533
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.... .......+....
T Consensus 179 ~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~------- 242 (304)
T 3ubd_A 179 HE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------RKETMTMILKAK------- 242 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-------
T ss_pred CC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--------HHHHHHHHHcCC-------
Confidence 22 23445789999999999999999999999999999999999999997321 122222222111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTM-----KQVVQ 1093 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 1093 (1103)
...+...++++.+++.+||+.||++|||+ +|+++
T Consensus 243 ----~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 243 ----LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred ----CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 12344567789999999999999999984 57764
No 34
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=4.3e-45 Score=404.16 Aligned_cols=251 Identities=24% Similarity=0.404 Sum_probs=192.0
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC--------
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN-------- 891 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 891 (1103)
++|++.+.||+|+||+||+|... +|+.||||++.....+...+.+.+|+.++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35889999999999999999765 689999999987766666778999999999999999999999886543
Q ss_pred ----eEEEEEeecCCCChHHHHHhhcC-CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEee
Q 043720 892 ----EMFLIYNYLPGGNLENFIKARTS-RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSD 966 (1103)
Q Consensus 892 ----~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 966 (1103)
..|+|||||++|+|.++++.... ...++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEcc
Confidence 47999999999999999986543 2345677889999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCC-----------ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCc
Q 043720 967 FGLSRLLGTSET-----------HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGF 1035 (1103)
Q Consensus 967 fgla~~~~~~~~-----------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~ 1035 (1103)
||+|+....... ......+||+.|||||++.+..|+.++|||||||++|||++ ||... .
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~-------~ 231 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQ-------M 231 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSH-------H
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCc-------c
Confidence 999987643322 12234679999999999999999999999999999999996 66421 0
Q ss_pred chHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1036 NIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
........ ....... +......+.+.+++.+||+.||++|||+.|++++
T Consensus 232 ~~~~~~~~-~~~~~~p---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 232 ERVRTLTD-VRNLKFP---------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHH-HHTTCCC---------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHH-HhcCCCC---------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111111 1111110 0112334557789999999999999999999873
No 35
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-44 Score=438.88 Aligned_cols=442 Identities=20% Similarity=0.203 Sum_probs=345.5
Q ss_pred ccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCC
Q 043720 98 KLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRN 177 (1103)
Q Consensus 98 ~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 177 (1103)
.+|+.+. ++|++|+|++|.+++..|..+.++++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+|.. .
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~ 88 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--P 88 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--C
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--c
Confidence 4776665 89999999999999888889999999999999999999888999999999999999999999 78877 8
Q ss_pred CCCCCEEEccCCcCCC-CCChhcccCCCCcEeecccccCCCCCChhHHhhcCcC--cEEECcCCcc--ccccCccccCCC
Q 043720 178 FESLEVLNLAGNQVKG-VIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYL--EHLDLSGNSL--VGRIPSSLGKCQ 252 (1103)
Q Consensus 178 l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L--~~L~L~~N~l--~~~~p~~l~~l~ 252 (1103)
+++|++|+|++|++++ .+|..|+++++|++|++++|++++ ..+.. +++| ++|++++|.+ ++..|..+..+.
T Consensus 89 l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~-l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~ 164 (520)
T 2z7x_B 89 TVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLP-IAHLNISKVLLVLGETYGEKEDPEGLQDFN 164 (520)
T ss_dssp CCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGG-GTTSCEEEEEEEECTTTTSSCCTTTTTTCC
T ss_pred cCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccc-cccceeeEEEeecccccccccccccccccc
Confidence 9999999999999997 578999999999999999999985 23333 4668 9999999999 888888888776
Q ss_pred -CCCEEeCCCccCCcccc-ccccCCCCCCEEEccCCc-------CCCcCCccccCCCCCCeEecccCcCccccCccccCc
Q 043720 253 -QLRTLLLFSNMLNDVIP-RELGWLRKLEVLDVSRNR-------LNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGE 323 (1103)
Q Consensus 253 -~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~-------l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~ 323 (1103)
+...+++++|.+.+.++ ..+..+++|+.|++++|. +.+.+| .++.+++|+.|++++|
T Consensus 165 ~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~------------- 230 (520)
T 2z7x_B 165 TESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNI------------- 230 (520)
T ss_dssp EEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEE-------------
T ss_pred cceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccc-------------
Confidence 45577899999888655 467889999999999998 776666 7888888999888753
Q ss_pred ccccccCCCCCCCCcccccCchhhh---ccccccccccCCccccccCCccc-----cccccCcEEEcCCcccccccchhh
Q 043720 324 LSVGQSDASNGEKNSFIGSIPMEIT---TLSKLRIIWAPRLNLEGKLPSSW-----GACESLEMLNLAQNVLRGDLIGVF 395 (1103)
Q Consensus 324 ~~~~~~~~~~~~~n~~~~~ip~~~~---~L~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~~~~~~ 395 (1103)
.+.+..+..+. ..++|+.|++++|.+.|.+|..+ +.+++|+.+++++|.+ ..+...+
T Consensus 231 --------------~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~ 295 (520)
T 2z7x_B 231 --------------ETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF-GFPQSYI 295 (520)
T ss_dssp --------------EEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-CSCTHHH
T ss_pred --------------ccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-ecchhhh
Confidence 22222221111 13467777777777777777766 6677777777777766 2222444
Q ss_pred hcc---CCceEeecCCccccccccccccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHh
Q 043720 396 DRC---KKLHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMS 472 (1103)
Q Consensus 396 ~~l---~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1103)
..+ .+|+.|++++|.+.... ....+++|+
T Consensus 296 ~~~~~~~~L~~L~l~~n~l~~~~-~~~~l~~L~----------------------------------------------- 327 (520)
T 2z7x_B 296 YEIFSNMNIKNFTVSGTRMVHML-CPSKISPFL----------------------------------------------- 327 (520)
T ss_dssp HHHHHTCCCSEEEEESSCCCCCC-CCSSCCCCC-----------------------------------------------
T ss_pred hcccccCceeEEEcCCCcccccc-chhhCCccc-----------------------------------------------
Confidence 443 45666666666654211 001223333
Q ss_pred hhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCC
Q 043720 473 KARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNN 552 (1103)
Q Consensus 473 ~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n 552 (1103)
.|++++|
T Consensus 328 -------------------------------------------------------------------------~L~Ls~n 334 (520)
T 2z7x_B 328 -------------------------------------------------------------------------HLDFSNN 334 (520)
T ss_dssp -------------------------------------------------------------------------EEECCSS
T ss_pred -------------------------------------------------------------------------EEEeECC
Confidence 4555555
Q ss_pred cccccCCchhhhcCCCccEEECcCCcCCC--CCcccccCCCCCCEEEccCCcCCCCCCc-ccccCccCcEEeccCcccCC
Q 043720 553 NIIGHIPLDIGVMCKSLRVLDASHNQISG--IVPQSLENLTSLVFLDLNGNKLQGEIPS-SLHRLKYLRHLSLADNNLTG 629 (1103)
Q Consensus 553 ~~~~~ip~~~~~~~~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~ 629 (1103)
++.+.+|..+..+ ++|++|+|++|+|++ .+|..+..+++|++|+|++|++++.+|. .+..+++|++|+|++|++++
T Consensus 335 ~l~~~~~~~~~~l-~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 335 LLTDTVFENCGHL-TELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp CCCTTTTTTCCCC-SSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred ccChhhhhhhccC-CCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 5555555555544 789999999999986 4567788999999999999999975665 47888999999999999988
Q ss_pred CCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCc-cccCCCCCceEeCCCCCCCCCC
Q 043720 630 GIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPS-GLANVTSLSIFNASFNNLSGPF 703 (1103)
Q Consensus 630 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~l~l~~N~l~~~~ 703 (1103)
.+|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +|. .+..+++|+.|++++|++++..
T Consensus 414 ~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 414 TIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp GGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred chhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccC
Confidence 7777665 78999999999998 678777799999999999999994 555 4888999999999999998743
No 36
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.4e-44 Score=436.41 Aligned_cols=182 Identities=22% Similarity=0.235 Sum_probs=150.3
Q ss_pred ccccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCC--CCcccccCccCcE
Q 043720 542 FHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGE--IPSSLHRLKYLRH 619 (1103)
Q Consensus 542 ~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~ 619 (1103)
.....+++++|++.... +...+++|++|+|++|++++.+|..+.++++|++|+|++|++++. +|..|..+++|++
T Consensus 331 ~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~ 407 (562)
T 3a79_B 331 MNIKMLSISDTPFIHMV---CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLET 407 (562)
T ss_dssp CCCSEEEEESSCCCCCC---CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCE
T ss_pred CcceEEEccCCCccccc---CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCE
Confidence 34557888888875322 113448899999999999998999999999999999999999952 3467899999999
Q ss_pred EeccCcccCCCCCC-cccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCC
Q 043720 620 LSLADNNLTGGIPS-SIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNN 698 (1103)
Q Consensus 620 L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~ 698 (1103)
|+|++|++++.+|. .+..+++|++|+|++|++++..|..+. ++|+.|+|++|+|+ .+|..+..+++|+.|++++|+
T Consensus 408 L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~ 484 (562)
T 3a79_B 408 LDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQ 484 (562)
T ss_dssp EECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSC
T ss_pred EECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCC
Confidence 99999999984554 588999999999999999877766543 79999999999999 677777799999999999999
Q ss_pred CCCCCCC---CccccccccccCCCCCCCCCCCCC
Q 043720 699 LSGPFPW---NVTTMNCSGVIGNPFLDPCQMYKD 729 (1103)
Q Consensus 699 l~~~~p~---~~~~~~~~~l~~Np~~c~C~~~~~ 729 (1103)
|++.++. .+..+..+++.+|||.|+|++..+
T Consensus 485 l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 485 LKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp CCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred CCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 9976664 344667778999999999998654
No 37
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.2e-44 Score=433.86 Aligned_cols=460 Identities=22% Similarity=0.183 Sum_probs=360.2
Q ss_pred ccccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCC-CCC
Q 043720 94 KLVGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDG-DIP 172 (1103)
Q Consensus 94 ~~~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p 172 (1103)
.+.+..|..++++++|++|+|++|.+++..|..|+++++|++|||++|.+++..|..|+.+++|++|+|++|++++ .+|
T Consensus 37 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 116 (549)
T 2z81_A 37 KITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVT 116 (549)
T ss_dssp CCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSS
T ss_pred ccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchh
Confidence 3455556789999999999999999999888999999999999999999998888889999999999999999996 467
Q ss_pred CCCCCCCCCCEEEccCCcCCCCCC-hhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCcc-ccC
Q 043720 173 FSLRNFESLEVLNLAGNQVKGVIP-GFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSS-LGK 250 (1103)
Q Consensus 173 ~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~-l~~ 250 (1103)
..++++++|++|++++|.+.+.+| ..|+++++|++|++++|++++.+|..+.. +++|++|++++|.+.. +|.. +..
T Consensus 117 ~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~l~~n~~~~-~~~~~~~~ 194 (549)
T 2z81_A 117 SLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS-IRDIHHLTLHLSESAF-LLEIFADI 194 (549)
T ss_dssp CSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT-CSEEEEEEEECSBSTT-HHHHHHHS
T ss_pred hhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc-cccCceEecccCcccc-cchhhHhh
Confidence 889999999999999999555555 68999999999999999999888988876 4789999999999874 4444 467
Q ss_pred CCCCCEEeCCCccCCccc--cc-cccCCCCCCEEEccCCcCCCcCC----ccccCCCCCCeEecccCcCccccCccccCc
Q 043720 251 CQQLRTLLLFSNMLNDVI--PR-ELGWLRKLEVLDVSRNRLNGLIP----TELGNCVELSVLVLSNLFDPLLSGRNIRGE 323 (1103)
Q Consensus 251 l~~L~~L~L~~N~l~~~~--p~-~l~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~ 323 (1103)
+++|++|++++|++++.. |. ....+++|+.|++++|.+++..+ ..+..+++|+.+++++|....+..
T Consensus 195 l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~------ 268 (549)
T 2z81_A 195 LSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGD------ 268 (549)
T ss_dssp TTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSC------
T ss_pred cccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccccc------
Confidence 999999999999999842 22 23457899999999999987544 445678999999998754322110
Q ss_pred ccccccCCCCCCCCcccccCchhhhccccccccccCCcccccc-----CCccccccccCcEEEcCCcccccccchhhhcc
Q 043720 324 LSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGK-----LPSSWGACESLEMLNLAQNVLRGDLIGVFDRC 398 (1103)
Q Consensus 324 ~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 398 (1103)
+.......+..+.+|+.|.+.++.+... ++..+....+|+.|++++|++...+...+.++
T Consensus 269 ---------------~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l 333 (549)
T 2z81_A 269 ---------------FNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHL 333 (549)
T ss_dssp ---------------CCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHC
T ss_pred ---------------ccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcC
Confidence 0001112345567788888887765532 22334456789999999999986665666789
Q ss_pred CCceEeecCCccccccccc----cccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhh
Q 043720 399 KKLHFIDLSSNELSGELDV----KLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKA 474 (1103)
Q Consensus 399 ~~L~~LdLs~N~l~~~~~~----~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1103)
++|++|+|++|++++.++. ...+++|+.|++++|++++..+.
T Consensus 334 ~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---------------------------------- 379 (549)
T 2z81_A 334 KSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKT---------------------------------- 379 (549)
T ss_dssp TTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHH----------------------------------
T ss_pred ccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccc----------------------------------
Confidence 9999999999999986542 34677788888888877531000
Q ss_pred hcCchhhhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcc
Q 043720 475 RLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNI 554 (1103)
Q Consensus 475 ~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~ 554 (1103)
T Consensus 380 -------------------------------------------------------------------------------- 379 (549)
T 2z81_A 380 -------------------------------------------------------------------------------- 379 (549)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCc
Q 043720 555 IGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSS 634 (1103)
Q Consensus 555 ~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 634 (1103)
......+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|..+ .++|+.|+|++|++++.+
T Consensus 380 -----~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~--- 447 (549)
T 2z81_A 380 -----GEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS--- 447 (549)
T ss_dssp -----HHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC---
T ss_pred -----hhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc---
Confidence 001112367889999999998 56788888899999999999988 455544 258899999999988642
Q ss_pred ccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCcccccccc
Q 043720 635 IGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNVTTMNCSG 714 (1103)
Q Consensus 635 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~ 714 (1103)
..+++|++|+|++|+|+ .+|. ...+++|+.|+|++|+|++.+|..+..+++|+.|+
T Consensus 448 -~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~--------------------- 503 (549)
T 2z81_A 448 -LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIW--------------------- 503 (549)
T ss_dssp -CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEE---------------------
T ss_pred -ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEE---------------------
Confidence 57888999999999998 5665 46788899999999999888888888888888775
Q ss_pred ccCCCCCCCCCC
Q 043720 715 VIGNPFLDPCQM 726 (1103)
Q Consensus 715 l~~Np~~c~C~~ 726 (1103)
+.+|||.|+|+.
T Consensus 504 l~~N~~~~~~~~ 515 (549)
T 2z81_A 504 LHTNPWDCSCPR 515 (549)
T ss_dssp CCSSCBCCCHHH
T ss_pred ecCCCccCCCcc
Confidence 456688899874
No 38
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.1e-42 Score=386.35 Aligned_cols=268 Identities=29% Similarity=0.498 Sum_probs=214.4
Q ss_pred CCCChhhHHHHHHHHhhccCCCCcccCcCCCCCCCCc--eeeeEecCC---CCeEEEEecCCCCCCCCCCcccccccccc
Q 043720 1 SGKVLPEKTILLEFKNSVSDPSGILSSWQTNTSSHCS--WFGVSCDSE---SRVVALNITGGDVSEGNSKPFFSCLMTAQ 75 (1103)
Q Consensus 1 ~~~~~~~~~aLl~~k~~~~d~~~~l~sW~~~~~~~C~--W~GV~C~~~---~~v~~l~l~~~~~~~~~~~~~~~~~~~~~ 75 (1103)
++|.+.|++||++||+++.||. .+++|+.+ .|||. |.||+|+.. ++|+.+++.+..
T Consensus 1 ~~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~-~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~----------------- 61 (313)
T 1ogq_A 1 ELCNPQDKQALLQIKKDLGNPT-TLSSWLPT-TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN----------------- 61 (313)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCG-GGTTCCTT-SCTTTTCSTTEEECCSSSCCCEEEEEEECCC-----------------
T ss_pred CCCCHHHHHHHHHHHHhcCCcc-cccCCCCC-CCCCcCCCcceEeCCCCCCceEEEEECCCCC-----------------
Confidence 4799999999999999999987 79999764 48998 999999864 688888876542
Q ss_pred ccccccccccceeccCCCcccc--ccCcccCCCCCCCEEEccC-CCCcccCCccccCCCCCCEEEeecCCCCCCcccccc
Q 043720 76 FPFYGFGMRRRTCLHGRGKLVG--KLSPLVGGLSELRVLSLPF-NGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFV 152 (1103)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~g--~~~~~l~~l~~L~~L~L~~-n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~ 152 (1103)
+.| .+|+.++++++|++|+|++ |.+.+.+|..++++++|++|+|++|.+++.+|..|+
T Consensus 62 -------------------l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~ 122 (313)
T 1ogq_A 62 -------------------LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS 122 (313)
T ss_dssp -------------------CSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGG
T ss_pred -------------------ccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHh
Confidence 234 5777788888888888884 888888888888888888888888888888888888
Q ss_pred CCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCC-CCcEeecccccCCCCCChhHHhhcCcCc
Q 043720 153 GLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFL-KLRVLFLSYNELNGSIPSELGKYCRYLE 231 (1103)
Q Consensus 153 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~L~~N~l~g~ip~~~~~~~~~L~ 231 (1103)
.+++|++|+|++|++++.+|..+.++++|++|+|++|++++.+|..++.++ +|++|++++|++++.+|..+... + |+
T Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l-~-L~ 200 (313)
T 1ogq_A 123 QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-N-LA 200 (313)
T ss_dssp GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGC-C-CS
T ss_pred CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCC-c-cc
Confidence 888888888888888888888888888888888888888878888888777 78888888888887777777654 4 88
Q ss_pred EEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEeccc
Q 043720 232 HLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSN 309 (1103)
Q Consensus 232 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~ 309 (1103)
+|+|++|++++..|..++.+++|+.|+|++|.+++.+|. +..+++|++|+|++|++++.+|..+.++++|+.|++++
T Consensus 201 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~ 277 (313)
T 1ogq_A 201 FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277 (313)
T ss_dssp EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCS
T ss_pred EEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcC
Confidence 888888888777777777788888888888887775554 66777777777777777777777777777777777763
No 39
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=9.5e-43 Score=394.98 Aligned_cols=291 Identities=37% Similarity=0.694 Sum_probs=253.0
Q ss_pred CCCCHHHHHHHhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEe
Q 043720 809 VPLTYESIIRATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRA 888 (1103)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 888 (1103)
..+++.++..+.++|++.+.||+|+||+||+|...+++.||||++...........+.+|+.+++.++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 45788999999999999999999999999999888899999999987655444457899999999999999999999999
Q ss_pred cCCeEEEEEeecCCCChHHHHHhhcC--CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEee
Q 043720 889 SGNEMFLIYNYLPGGNLENFIKARTS--RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSD 966 (1103)
Q Consensus 889 ~~~~~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 966 (1103)
..+..++||||+++|+|.++++.... ..+++..+..++.|++.||+|||+++.++|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 99999999999999999999987543 3489999999999999999999998777999999999999999999999999
Q ss_pred cccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHh
Q 043720 967 FGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLR 1046 (1103)
Q Consensus 967 fgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1103)
||+++..............||+.|+|||++.+..++.++||||||+++|||++|+.||+..............|......
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 99998876555555566679999999999988889999999999999999999999997544444455566677766666
Q ss_pred cCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1047 QGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
........+.......+...+..+.+++.+||+.||++|||++||+++|++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 66677777777777778889999999999999999999999999999998753
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=396.72 Aligned_cols=262 Identities=21% Similarity=0.328 Sum_probs=202.5
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEec------CCe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS------GNE 892 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 892 (1103)
++|++.+.||+|+||+||+|... +|+.||||+++.... ....+.+.+|+.+|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999764 699999999976543 3345778899999999999999999998754 367
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.|+|||||+ |+|.+++.... .+++.++..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 68999997643 599999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC---CccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcC
Q 043720 973 LGTSE---THATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQG 1048 (1103)
Q Consensus 973 ~~~~~---~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1103)
+.... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||..... ......+.......
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~-----~~~l~~I~~~~g~p 282 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY-----VHQLQLIMMVLGTP 282 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH-----HHHHHHHHHHHCCC
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCH-----HHHHHHHHHhcCCC
Confidence 64332 2234567899999999998775 468999999999999999999999974321 11111111110000
Q ss_pred ccccccc-----------ccc--cCC-----CChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1049 QVKDVFN-----------AEL--WAS-----GPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1049 ~~~~~~~-----------~~~--~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. ..... ... ... .......++.+|+.+||..||++|||++|++++
T Consensus 283 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 283 S-PAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp C-GGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred C-hHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0 00000 000 000 011235678999999999999999999999874
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=4e-42 Score=390.99 Aligned_cols=199 Identities=25% Similarity=0.404 Sum_probs=171.0
Q ss_pred HHhcCCCCcceeccCCcccEEEEEEc----CCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCe
Q 043720 818 RATGDFNTSNCIGSGGFGTTYKAEIS----PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNE 892 (1103)
Q Consensus 818 ~~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 892 (1103)
...++|++.+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++++.+ .|||||++++++.+.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 45678999999999999999999653 46889999986543 335678999999998 69999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC-CCEEEeeccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD-FNAYLSDFGLSR 971 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~ki~Dfgla~ 971 (1103)
+|+||||+++|+|.++++ .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 999999999999999984 288999999999999999999999 99999999999999876 799999999998
Q ss_pred ccCCCCC---------------------------ccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCC
Q 043720 972 LLGTSET---------------------------HATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKA 1023 (1103)
Q Consensus 972 ~~~~~~~---------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p 1023 (1103)
....... ......+||+.|+|||++.+. .|+.++||||+||++|||++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 6543211 112345799999999999775 589999999999999999999999
Q ss_pred CCCC
Q 043720 1024 LDPS 1027 (1103)
Q Consensus 1024 ~~~~ 1027 (1103)
|...
T Consensus 247 f~~~ 250 (361)
T 4f9c_A 247 FYKA 250 (361)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9743
No 42
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.4e-42 Score=418.66 Aligned_cols=485 Identities=19% Similarity=0.197 Sum_probs=332.1
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
...+++++++|+++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..|.++++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 34478899998888 4887665 78889999999888777788888888999999988888777888888888888888
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCC-CCChhHHhhcCcCcEEECcCCccccccCccccCCCCC--CEEeCCCcc
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNG-SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQL--RTLLLFSNM 263 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g-~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~ 263 (1103)
++|+++ .+|.. .+++|++|+|++|++++ .+|..+.. +++|++|+|++|++++. .+..+++| ++|++++|.
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~-l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGN-LTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGG-CTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESS
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcc-cCcccEEecCCCccccC---chhhhhhceeeEEEeeccc
Confidence 888888 55655 78888888888888874 33456655 47788888888888753 34445555 888888888
Q ss_pred C--CccccccccCCC--CCCEEEccCCcCCCcCCc-cccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCc
Q 043720 264 L--NDVIPRELGWLR--KLEVLDVSRNRLNGLIPT-ELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNS 338 (1103)
Q Consensus 264 l--~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~ 338 (1103)
+ ++..|.++..+. .+ .+++++|.+.+.++. .+.++++|+.|++++|... ...
T Consensus 181 l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~----------------------~~~ 237 (562)
T 3a79_B 181 YHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDEN----------------------CQR 237 (562)
T ss_dssp CCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTT----------------------HHH
T ss_pred ccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccc----------------------cch
Confidence 8 777777777654 33 557778887765554 3556777777777643100 000
Q ss_pred ccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchh---hhccCCceEeecCCccccccc
Q 043720 339 FIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGV---FDRCKKLHFIDLSSNELSGEL 415 (1103)
Q Consensus 339 ~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~---~~~l~~L~~LdLs~N~l~~~~ 415 (1103)
+.+ .+..+. .+++|+.|+|+++.+.+..... ....++|++|++++|++++.+
T Consensus 238 l~~-~~~~l~------------------------~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~i 292 (562)
T 3a79_B 238 LMT-FLSELT------------------------RGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERI 292 (562)
T ss_dssp HHH-HHHHHH------------------------SCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCC
T ss_pred HHH-HHHHHh------------------------ccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccc
Confidence 111 112233 3444444444444443321110 112235666666666666554
Q ss_pred ccc------ccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceE
Q 043720 416 DVK------LQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMV 489 (1103)
Q Consensus 416 ~~~------~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 489 (1103)
|.. ..+..|+.++++.|.+ .+|... +. .......+.
T Consensus 293 p~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~------------------------~~------------~~~~~~~L~ 334 (562)
T 3a79_B 293 DREEFTYSETALKSLMIEHVKNQVF--LFSKEA------------------------LY------------SVFAEMNIK 334 (562)
T ss_dssp CCCCCCCCSCSCCEEEEEEEEECCC--SSCHHH------------------------HH------------HHHHTCCCS
T ss_pred cchhhhcccccchheehhhccccee--ecChhh------------------------hh------------hhhccCcce
Confidence 432 2344455555555544 222100 00 000012344
Q ss_pred EEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCc
Q 043720 490 IHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSL 569 (1103)
Q Consensus 490 ~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L 569 (1103)
.+++++|++....+ + . .......+++++|++.+.+|..+..+ ++|
T Consensus 335 ~L~l~~n~~~~~~~--~------------------------------~--~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L 379 (562)
T 3a79_B 335 MLSISDTPFIHMVC--P------------------------------P--SPSSFTFLNFTQNVFTDSVFQGCSTL-KRL 379 (562)
T ss_dssp EEEEESSCCCCCCC--C------------------------------S--SCCCCCEEECCSSCCCTTTTTTCCSC-SSC
T ss_pred EEEccCCCcccccC--c------------------------------c--CCCCceEEECCCCccccchhhhhccc-CCC
Confidence 55566665543110 0 0 01123478999999998888888765 899
Q ss_pred cEEECcCCcCCCCC--cccccCCCCCCEEEccCCcCCCCCCc-ccccCccCcEEeccCcccCCCCCCcccCCCCCcEEec
Q 043720 570 RVLDASHNQISGIV--PQSLENLTSLVFLDLNGNKLQGEIPS-SLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLEL 646 (1103)
Q Consensus 570 ~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 646 (1103)
++|+|++|+|+++. |..|.++++|++|+|++|++++.+|. .+..+++|++|+|++|++++.+|..+. ++|++|+|
T Consensus 380 ~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L 457 (562)
T 3a79_B 380 QTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDL 457 (562)
T ss_dssp CEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEEC
T ss_pred CEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEEC
Confidence 99999999999743 56799999999999999999975665 588999999999999999988777665 79999999
Q ss_pred cCccccCcChhhhhhcccccccccccccCcCCCCcc-ccCCCCCceEeCCCCCCCCCCCC-C----cccccccccc----
Q 043720 647 SSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSG-LANVTSLSIFNASFNNLSGPFPW-N----VTTMNCSGVI---- 716 (1103)
Q Consensus 647 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~l~l~~N~l~~~~p~-~----~~~~~~~~l~---- 716 (1103)
++|+|+ .+|..+..+++|+.|+|++|+|+ .+|.. +..+++|+.|++++|++.+..+. . +.......+.
T Consensus 458 ~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~~~~~~~~~~~~~~~~ 535 (562)
T 3a79_B 458 HNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLSEWINKHSGVVRNSAG 535 (562)
T ss_dssp CSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHHHHHHHHHHHHTTTTEECSSS
T ss_pred CCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcchHHHHHHHHHhcCCccccccc
Confidence 999999 67777779999999999999999 45554 89999999999999999875432 1 1111112233
Q ss_pred -CCCCCCCCCC
Q 043720 717 -GNPFLDPCQM 726 (1103)
Q Consensus 717 -~Np~~c~C~~ 726 (1103)
+.|+.+.|..
T Consensus 536 ~~~~~~~~C~~ 546 (562)
T 3a79_B 536 SVAPDSAKCSG 546 (562)
T ss_dssp SBCSSSSCBSS
T ss_pred CCCCCCCccCC
Confidence 7788888876
No 43
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.4e-41 Score=381.17 Aligned_cols=283 Identities=34% Similarity=0.602 Sum_probs=241.5
Q ss_pred HHHHHHHhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCe
Q 043720 813 YESIIRATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNE 892 (1103)
Q Consensus 813 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 892 (1103)
+.++..++++|+..+.||+|+||+||+|...+++.||||++..... ...+.+.+|+.+++.++||||+++++++...+.
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 109 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-QGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCe
Confidence 3444556789999999999999999999988899999999876543 356789999999999999999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcC--CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTS--RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLS 970 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla 970 (1103)
.++||||+++|+|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 186 (321)
T 2qkw_B 110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGIS 186 (321)
T ss_dssp CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccc
Confidence 9999999999999999875432 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc
Q 043720 971 RLLGTSET-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ 1049 (1103)
Q Consensus 971 ~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1103)
+....... .......|++.|+|||++.+..++.++||||||+++|||++|+.||...... .......|.......+.
T Consensus 187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS--SCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH--HHHHHHHHhhhcccccc
Confidence 86543222 2234456899999999999889999999999999999999999999754432 23345566655566666
Q ss_pred ccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1050 VKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
....+++......+...+..+.+++.+||+.||++||+++|++++|+.+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 6677777766667788899999999999999999999999999999988654
No 44
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.4e-41 Score=403.03 Aligned_cols=250 Identities=23% Similarity=0.339 Sum_probs=203.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHH---HHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQ---FHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~---~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
++|++.+.||+|+||+||+|+.. +|+.||||++.+... ...... ...++.+++.++|||||++++++.+.+.+|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 46999999999999999999765 589999999975432 112222 334567788889999999999999999999
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccC
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~ 974 (1103)
+|||||+||+|.+++++.. .+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 269 lVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 9999999999999998754 499999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
.. .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||...... .............
T Consensus 344 ~~---~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~-----~~~~i~~~i~~~~----- 410 (689)
T 3v5w_A 344 KK---KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEIDRMTLTMA----- 410 (689)
T ss_dssp SC---CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC-----CHHHHHHHHHHCC-----
T ss_pred CC---CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHhhcCCC-----
Confidence 32 2345689999999999964 57999999999999999999999999743221 1111111111111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPT-----MKQVVQC 1094 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 1094 (1103)
...+...+.++.++|.+||+.||++|++ ++||++|
T Consensus 411 ------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 411 ------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 1234456678999999999999999998 6787653
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.8e-41 Score=395.84 Aligned_cols=273 Identities=22% Similarity=0.198 Sum_probs=167.2
Q ss_pred cccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCC-------------CEEEcccccc
Q 043720 101 PLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNL-------------RVLNLAFNRI 167 (1103)
Q Consensus 101 ~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L-------------~~L~Ls~N~l 167 (1103)
|.-.+.++|++|++++|.+ |.+|++++++++|++|++++|.++|.+|..++.+++| ++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 3334568999999999999 7999999999999999999999999999999998875 8888888888
Q ss_pred CCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCcc
Q 043720 168 DGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSS 247 (1103)
Q Consensus 168 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~ 247 (1103)
++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|+++ .+|.. .++|++|++++|++++ +| .
T Consensus 84 ~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~----~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 84 SS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDL----PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp SC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSC----CTTCCEEECCSSCCSS-CC-C
T ss_pred cc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCC----CCCCCEEECcCCCCCC-Cc-c
Confidence 84 5542 3678888888888886 5643 378888888888888 45432 2568888888888885 66 5
Q ss_pred ccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCccccc
Q 043720 248 LGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVG 327 (1103)
Q Consensus 248 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~ 327 (1103)
++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|+.|++++|.
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~---------------- 206 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNS---------------- 206 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSC----------------
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCc----------------
Confidence 8888888888888888887 55443 588888888888886 45 57888888888887532
Q ss_pred ccCCCCCCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecC
Q 043720 328 QSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLS 407 (1103)
Q Consensus 328 ~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs 407 (1103)
+.+ +|... ++|+.|++++|.+. .+| .++.+++|++|++++|++++.+ . .+++|+.|+++
T Consensus 207 -----------l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~-~---~~~~L~~L~l~ 265 (454)
T 1jl5_A 207 -----------LKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLP-D---LPPSLEALNVR 265 (454)
T ss_dssp -----------CSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCC-S---CCTTCCEEECC
T ss_pred -----------CCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCccc-c---cccccCEEECC
Confidence 221 22211 35666666666665 444 3566666666666666665422 1 12555666666
Q ss_pred CccccccccccccccceeEEEecCCccc
Q 043720 408 SNELSGELDVKLQVPCMALFDVSGNHMS 435 (1103)
Q Consensus 408 ~N~l~~~~~~~~~~~~L~~l~ls~N~l~ 435 (1103)
+|++++. |.. .++|+.|++++|+++
T Consensus 266 ~N~l~~l-~~~--~~~L~~L~ls~N~l~ 290 (454)
T 1jl5_A 266 DNYLTDL-PEL--PQSLTFLDVSENIFS 290 (454)
T ss_dssp SSCCSCC-CCC--CTTCCEEECCSSCCS
T ss_pred CCccccc-Ccc--cCcCCEEECcCCccC
Confidence 6665542 211 244555555555444
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.1e-40 Score=388.68 Aligned_cols=377 Identities=23% Similarity=0.251 Sum_probs=262.0
Q ss_pred CCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCC-ChhcccCCCCcEeecc
Q 043720 133 LEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVI-PGFLGSFLKLRVLFLS 211 (1103)
Q Consensus 133 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~L~ 211 (1103)
-+.++.+++.++ .+|. + .++|++|+|++|++++..|..++++++|++|+|++|.+.+.+ +..|+++++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 346777777777 6665 3 277888888888888777778888888888888888877555 4567777788888888
Q ss_pred cccCCCCCChhHHhhcCcCcEEECcCCccccccCcc--ccCCCCCCEEeCCCccCCcccccc-ccCCCCCCEEEccCCcC
Q 043720 212 YNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSS--LGKCQQLRTLLLFSNMLNDVIPRE-LGWLRKLEVLDVSRNRL 288 (1103)
Q Consensus 212 ~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l 288 (1103)
+|++++..|..+.. +++|++|+|++|++++.++.. ++.+++|++|+|++|.+++..|.. +..+++|++|++++|++
T Consensus 88 ~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l 166 (455)
T 3v47_A 88 YNQFLQLETGAFNG-LANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV 166 (455)
T ss_dssp TCTTCEECTTTTTT-CTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCB
T ss_pred CCccCccChhhccC-cccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcc
Confidence 88777555655554 466777777777777644443 677777777777777777766655 66777777777777777
Q ss_pred CCcCCccccCC--CCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCcccccc
Q 043720 289 NGLIPTELGNC--VELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGK 366 (1103)
Q Consensus 289 ~~~~p~~l~~l--~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~ 366 (1103)
++..|..+..+ .+|+.|+++ +|.+.+.
T Consensus 167 ~~~~~~~l~~l~~~~L~~L~l~---------------------------------------------------~n~l~~~ 195 (455)
T 3v47_A 167 KSICEEDLLNFQGKHFTLLRLS---------------------------------------------------SITLQDM 195 (455)
T ss_dssp SCCCTTTSGGGTTCEEEEEECT---------------------------------------------------TCBCTTC
T ss_pred cccChhhhhccccccccccccc---------------------------------------------------cCccccc
Confidence 76666665554 344444444 3333322
Q ss_pred CCc--------cccccccCcEEEcCCcccccccchhhhcc---CCceEeecCCccccccccccccccceeEEEecCCccc
Q 043720 367 LPS--------SWGACESLEMLNLAQNVLRGDLIGVFDRC---KKLHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMS 435 (1103)
Q Consensus 367 ~p~--------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~ 435 (1103)
.+. .+..+++|++|+|++|++++..+..+..+ ++|+.|++++|.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~----------------------- 252 (455)
T 3v47_A 196 NEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNM----------------------- 252 (455)
T ss_dssp STTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTT-----------------------
T ss_pred chhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccc-----------------------
Confidence 221 12344566666666666666665555443 45555555555433
Q ss_pred cccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccc
Q 043720 436 GSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRR 515 (1103)
Q Consensus 436 g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~ 515 (1103)
+.... .+++.+.
T Consensus 253 ~~~~~------------------------------------------------------~~~~~~~-------------- 264 (455)
T 3v47_A 253 GSSFG------------------------------------------------------HTNFKDP-------------- 264 (455)
T ss_dssp SCCTT------------------------------------------------------CCSSCCC--------------
T ss_pred ccccc------------------------------------------------------hhhhccC--------------
Confidence 21100 0000000
Q ss_pred cceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCE
Q 043720 516 TDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVF 595 (1103)
Q Consensus 516 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 595 (1103)
....+.+ ...++|++|++++|++++..|..|..+++|++
T Consensus 265 ----------------------------------~~~~~~~-------~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 303 (455)
T 3v47_A 265 ----------------------------------DNFTFKG-------LEASGVKTCDLSKSKIFALLKSVFSHFTDLEQ 303 (455)
T ss_dssp ----------------------------------CTTTTGG-------GTTSCCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred ----------------------------------ccccccc-------ccccCceEEEecCccccccchhhcccCCCCCE
Confidence 0000000 01267899999999999888889999999999
Q ss_pred EEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccC
Q 043720 596 LDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKL 675 (1103)
Q Consensus 596 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 675 (1103)
|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++|++|+|++|+|
T Consensus 304 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 383 (455)
T 3v47_A 304 LTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQL 383 (455)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcc
Confidence 99999999987788899999999999999999888888899999999999999999888788899999999999999999
Q ss_pred cCCCCccccCCCCCceEeCCCC
Q 043720 676 SGHLPSGLANVTSLSIFNASFN 697 (1103)
Q Consensus 676 ~~~~p~~l~~l~~L~~l~l~~N 697 (1103)
++..+..+..+++|+.|++++|
T Consensus 384 ~~~~~~~~~~l~~L~~L~l~~N 405 (455)
T 3v47_A 384 KSVPDGIFDRLTSLQKIWLHTN 405 (455)
T ss_dssp SCCCTTTTTTCTTCCEEECCSS
T ss_pred ccCCHhHhccCCcccEEEccCC
Confidence 8766677788888888765544
No 47
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.8e-39 Score=403.32 Aligned_cols=499 Identities=21% Similarity=0.187 Sum_probs=384.3
Q ss_pred EEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcC
Q 043720 112 LSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQV 191 (1103)
Q Consensus 112 L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l 191 (1103)
.+-++-+++ .+|+.+. +++++|||++|+|++..|..|.++++|++|||++|+|++..|.+|.++++|++|+|++|+|
T Consensus 36 ~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l 112 (635)
T 4g8a_A 36 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 112 (635)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcC
Confidence 344445565 6787663 5799999999999977778999999999999999999977777899999999999999999
Q ss_pred CCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCcccc-ccCccccCCCCCCEEeCCCccCCccccc
Q 043720 192 KGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVG-RIPSSLGKCQQLRTLLLFSNMLNDVIPR 270 (1103)
Q Consensus 192 ~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 270 (1103)
++..+..|+++++|++|+|++|+++ .+|...+..+++|++|+|++|++++ .+|..++.+++|++|+|++|++++..+.
T Consensus 113 ~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 113 QSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 9887888999999999999999999 5666544556889999999999975 4688899999999999999999998888
Q ss_pred cccCCCCC----CEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchh
Q 043720 271 ELGWLRKL----EVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPME 346 (1103)
Q Consensus 271 ~l~~l~~L----~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~ 346 (1103)
.+..+.++ ..++++.|.++...+..+ ....+..+++.+|.. .....+..
T Consensus 192 ~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~--------------------------~~~~~~~~ 244 (635)
T 4g8a_A 192 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFD--------------------------SLNVMKTC 244 (635)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCS--------------------------SHHHHHHH
T ss_pred cccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccc--------------------------cccccchh
Confidence 88776554 478999999986555444 444566777764311 11223344
Q ss_pred hhccccccccccCCc------cccccCCccccccccCcEEEcCCccccc---ccchhhhccCCceEeecCCccccccccc
Q 043720 347 ITTLSKLRIIWAPRL------NLEGKLPSSWGACESLEMLNLAQNVLRG---DLIGVFDRCKKLHFIDLSSNELSGELDV 417 (1103)
Q Consensus 347 ~~~L~~L~~L~l~~n------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~LdLs~N~l~~~~~~ 417 (1103)
+..+..++...+..+ .+.......+..+..+..+++..+.... .....+..+.+++.+++.+|.+... +.
T Consensus 245 ~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~-~~ 323 (635)
T 4g8a_A 245 IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV-KD 323 (635)
T ss_dssp HHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC-GG
T ss_pred hcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc-cc
Confidence 556666665554322 2333445566777778777776665443 3345677788999999999988753 33
Q ss_pred cccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCc
Q 043720 418 KLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNN 497 (1103)
Q Consensus 418 ~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~ 497 (1103)
......++.|++++|++.+..+. ....+..+.+.+|.
T Consensus 324 ~~~~~~L~~L~l~~~~~~~~~~~-------------------------------------------~l~~L~~l~l~~n~ 360 (635)
T 4g8a_A 324 FSYNFGWQHLELVNCKFGQFPTL-------------------------------------------KLKSLKRLTFTSNK 360 (635)
T ss_dssp GGSCCCCSEEEEESCEESSCCCC-------------------------------------------BCTTCCEEEEESCC
T ss_pred cccchhhhhhhcccccccCcCcc-------------------------------------------cchhhhhccccccc
Confidence 44566789999999988643221 11223344555555
Q ss_pred cccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccc--cCCchhhhcCCCccEEECc
Q 043720 498 FTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIG--HIPLDIGVMCKSLRVLDAS 575 (1103)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~--~ip~~~~~~~~~L~~L~L~ 575 (1103)
..+++... .......+++++|.+.. ..|...... .+|++|+++
T Consensus 361 ~~~~~~~~----------------------------------~l~~L~~L~ls~n~l~~~~~~~~~~~~~-~~L~~L~~~ 405 (635)
T 4g8a_A 361 GGNAFSEV----------------------------------DLPSLEFLDLSRNGLSFKGCCSQSDFGT-ISLKYLDLS 405 (635)
T ss_dssp SCCBCCCC----------------------------------BCTTCCEEECCSSCCBEEEECCHHHHSC-SCCCEEECC
T ss_pred CCCCcccc----------------------------------cccccccchhhccccccccccccchhhh-hhhhhhhcc
Confidence 54422111 11124578999998853 455555544 899999999
Q ss_pred CCcCCCCCcccccCCCCCCEEEccCCcCCCCCC-cccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccCccc-cC
Q 043720 576 HNQISGIVPQSLENLTSLVFLDLNGNKLQGEIP-SSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSL-SG 653 (1103)
Q Consensus 576 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~ 653 (1103)
.|.+.. .+..+..+++|+.+++++|.+....+ ..|..+.+++.+++++|.+++..+..+..++.|++|+|++|.+ .+
T Consensus 406 ~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~ 484 (635)
T 4g8a_A 406 FNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 484 (635)
T ss_dssp SCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG
T ss_pred cccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccc
Confidence 999984 56678899999999999988775544 5688999999999999999999999999999999999999985 44
Q ss_pred cChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCc---cccccccccCCCCC
Q 043720 654 EVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNV---TTMNCSGVIGNPFL 721 (1103)
Q Consensus 654 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~---~~~~~~~l~~Np~~ 721 (1103)
..|..|..+++|+.|+|++|+|++.+|..|.++++|+.|++++|+|++.+|..+ ..++.+++.+|...
T Consensus 485 ~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 555 (635)
T 4g8a_A 485 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 555 (635)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCC
T ss_pred cCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCC
Confidence 578889999999999999999999999999999999999999999999888644 46677789998764
No 48
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.5e-40 Score=389.96 Aligned_cols=204 Identities=22% Similarity=0.233 Sum_probs=176.4
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCc-cccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEE
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRL-PNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLN 185 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (1103)
++|++|+|++|.+++..|..++++++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..++++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999888999999999999999999998776 56799999999999999999988899999999999999
Q ss_pred ccCCcCCCCCChh--cccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCC--CCCCEEeCCC
Q 043720 186 LAGNQVKGVIPGF--LGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKC--QQLRTLLLFS 261 (1103)
Q Consensus 186 L~~n~l~~~~p~~--l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L~~ 261 (1103)
|++|++++.++.. ++.+++|++|+|++|++++..|..++..+++|++|++++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866554 89999999999999999977787755567889999999999998888888876 6899999999
Q ss_pred ccCCcccccc--------ccCCCCCCEEEccCCcCCCcCCccccCC---CCCCeEecccC
Q 043720 262 NMLNDVIPRE--------LGWLRKLEVLDVSRNRLNGLIPTELGNC---VELSVLVLSNL 310 (1103)
Q Consensus 262 N~l~~~~p~~--------l~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~l~~~ 310 (1103)
|.+++..+.. +..+++|+.|++++|++++.+|..+..+ ++|+.|++++|
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~ 249 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNS 249 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTC
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccc
Confidence 9998865443 3356789999999999988877777654 67777777753
No 49
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-40 Score=402.09 Aligned_cols=252 Identities=23% Similarity=0.300 Sum_probs=209.0
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
++|++.+.||+|+||+||+|..+ +|+.||||++...... ..+.+.+|+.+|+.++|||||++++++.+.+.+|+||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~-~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES-DKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH-HHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchh-hHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 57999999999999999999665 6899999998765433 457789999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC--CCEEEeecccccccCCCC
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD--FNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~--~~~ki~Dfgla~~~~~~~ 977 (1103)
|++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~ 311 (573)
T 3uto_A 236 MSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ 311 (573)
T ss_dssp CCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred cCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence 99999999996543 3599999999999999999999999 99999999999999854 899999999999875332
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
.....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.... . .+...
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--------~~~~~~i~~~~-~--~~~~~ 378 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--------DETLRNVKSCD-W--NMDDS 378 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTC-C--CCCSG
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHhCC-C--CCCcc
Confidence 33455899999999999999999999999999999999999999973221 11122221111 0 01111
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.....+..+.+||.+||+.||++||++.|+++|
T Consensus 379 ----~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 379 ----AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ----GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 123445778999999999999999999999875
No 50
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.9e-40 Score=379.25 Aligned_cols=259 Identities=24% Similarity=0.413 Sum_probs=217.0
Q ss_pred hcCCCCcceeccCCcccEEEEEEc--------CCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecC
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS--------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASG 890 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 890 (1103)
.++|++.+.||+|+||+||+|... ++..||||+++........+.+.+|+.+++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 357899999999999999999753 35679999998776666778899999999999 899999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhhcC--------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE
Q 043720 891 NEMFLIYNYLPGGNLENFIKARTS--------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL 956 (1103)
Q Consensus 891 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll 956 (1103)
+..|+||||+++|+|.++++.... ..+++.++..++.||+.||+|||++ +|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999987532 3478999999999999999999999 99999999999999
Q ss_pred CCCCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 043720 957 DDDFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDG 1034 (1103)
Q Consensus 957 ~~~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~ 1034 (1103)
+.++.+||+|||+++........ ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~----- 311 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 311 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-----
Confidence 99999999999999876543322 2334567889999999999999999999999999999999 8888863211
Q ss_pred cchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1035 FNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
. ..... ... ......+..++..+.+++.+||+.||++||+++|+++.|+++.
T Consensus 312 ~---~~~~~-~~~---------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 312 E---ELFKL-LKE---------GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp G---GHHHH-HHT---------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H---HHHHH-Hhc---------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1 11111 111 1122334566788999999999999999999999999999975
No 51
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-39 Score=385.03 Aligned_cols=404 Identities=24% Similarity=0.275 Sum_probs=220.2
Q ss_pred CCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCC-------------CEEEccCCcCCCCC
Q 043720 129 SLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESL-------------EVLNLAGNQVKGVI 195 (1103)
Q Consensus 129 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L-------------~~L~L~~n~l~~~~ 195 (1103)
+.++|++|++++|.+ |.+|++++++++|++|++++|+++|.+|.+++++++| ++|++++|.+++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 468999999999999 7999999999999999999999999999999998875 777777777775 3
Q ss_pred ChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCC
Q 043720 196 PGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWL 275 (1103)
Q Consensus 196 p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 275 (1103)
|.. .++|++|++++|++++ +|.. .++|++|++++|++++ +|.. .++|++|++++|++++ +| +++.+
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l 152 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNS 152 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTC
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCC
Confidence 332 2577777777777774 6643 2567777777777764 3321 1567777777777776 55 47777
Q ss_pred CCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhccccccc
Q 043720 276 RKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRI 355 (1103)
Q Consensus 276 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~ 355 (1103)
++|++|++++|++++ +|..+ .+|++|++++ |.+.+ +| .++.+++|+.
T Consensus 153 ~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~---------------------------n~l~~-l~-~~~~l~~L~~ 199 (454)
T 1jl5_A 153 SFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGN---------------------------NQLEE-LP-ELQNLPFLTA 199 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCCC---TTCCEEECCS---------------------------SCCSS-CC-CCTTCTTCCE
T ss_pred CCCCEEECCCCcCcc-cCCCc---ccccEEECcC---------------------------CcCCc-Cc-cccCCCCCCE
Confidence 777777777777774 45433 3666666664 22222 34 3556666666
Q ss_pred cccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccccccceeEEEecCCccc
Q 043720 356 IWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMS 435 (1103)
Q Consensus 356 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~ 435 (1103)
|++++|.+.+ +|... ++|++|++++|+++. +| .|..+++|++|++++|++++. |. .+++|+.|++++|+++
T Consensus 200 L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~l-~~--~~~~L~~L~l~~N~l~ 270 (454)
T 1jl5_A 200 IYADNNSLKK-LPDLP---LSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLKTL-PD--LPPSLEALNVRDNYLT 270 (454)
T ss_dssp EECCSSCCSS-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CS--CCTTCCEEECCSSCCS
T ss_pred EECCCCcCCc-CCCCc---CcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcCCcc-cc--cccccCEEECCCCccc
Confidence 6666666654 33222 356666666666653 23 255666666666666666542 21 1245555555555554
Q ss_pred cccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccc
Q 043720 436 GSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRR 515 (1103)
Q Consensus 436 g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~ 515 (1103)
+ +|.. +
T Consensus 271 ~-l~~~---------------------------------------------------------------~---------- 276 (454)
T 1jl5_A 271 D-LPEL---------------------------------------------------------------P---------- 276 (454)
T ss_dssp C-CCCC---------------------------------------------------------------C----------
T ss_pred c-cCcc---------------------------------------------------------------c----------
Confidence 3 2210 0
Q ss_pred cceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCC-CCCC
Q 043720 516 TDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENL-TSLV 594 (1103)
Q Consensus 516 ~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l-~~L~ 594 (1103)
.....+++++|++++ +|. ..++|++|++++|+++++ + .+ ++|+
T Consensus 277 --------------------------~~L~~L~ls~N~l~~-l~~----~~~~L~~L~l~~N~l~~i-~----~~~~~L~ 320 (454)
T 1jl5_A 277 --------------------------QSLTFLDVSENIFSG-LSE----LPPNLYYLNASSNEIRSL-C----DLPPSLE 320 (454)
T ss_dssp --------------------------TTCCEEECCSSCCSE-ESC----CCTTCCEEECCSSCCSEE-C----CCCTTCC
T ss_pred --------------------------CcCCEEECcCCccCc-ccC----cCCcCCEEECcCCcCCcc-c----CCcCcCC
Confidence 012356777777765 221 115788999999998853 2 23 5899
Q ss_pred EEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccCccccC--cChhhhhhccccccccccc
Q 043720 595 FLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSLSG--EVPEGVVNLRNLTALLLDN 672 (1103)
Q Consensus 595 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~ 672 (1103)
+|++++|++++ +|.. +++|+.|+|++|+++ .+|. .+++|++|++++|++++ .+|..+..+ +.
T Consensus 321 ~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~ 384 (454)
T 1jl5_A 321 ELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RM 384 (454)
T ss_dssp EEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------EC
T ss_pred EEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hh
Confidence 99999999985 6654 578999999999998 4665 47889999999999987 566655433 34
Q ss_pred ccCcCCCCccccCCCCCceEeCCCCCCCC--CCCCCccccccccccCCCCCC
Q 043720 673 NKLSGHLPSGLANVTSLSIFNASFNNLSG--PFPWNVTTMNCSGVIGNPFLD 722 (1103)
Q Consensus 673 N~l~~~~p~~l~~l~~L~~l~l~~N~l~~--~~p~~~~~~~~~~l~~Np~~c 722 (1103)
|.+.+.+|.. +++|+.|++++|++++ .+|.. +..+.+.+|.+.|
T Consensus 385 n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s---l~~L~~~~~~~~~ 430 (454)
T 1jl5_A 385 NSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES---VEDLRMNSERVVD 430 (454)
T ss_dssp CC--------------------------------------------------
T ss_pred cccccccccc---cCcCCEEECCCCcCCccccchhh---HhheeCcCcccCC
Confidence 6666666653 4678888888888887 44433 3444555555544
No 52
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=373.58 Aligned_cols=261 Identities=26% Similarity=0.427 Sum_probs=216.7
Q ss_pred cCCCCcceeccCCcccEEEEEEc----CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS----PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
++|++.+.||+|+||+||+|... .+..||||++.........+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 56888999999999999999774 35569999998776666678899999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++|+|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 129 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred eeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999997653 3589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCc--cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 977 ETH--ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 977 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ........
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~~~~~-------- 268 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--------RDVISSVE-------- 268 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--------HHHHHHHH--------
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHH--------
Confidence 222 2233456788999999998899999999999999999999 9999863211 11111111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCCC
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSPN 1103 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 1103 (1103)
.......+..++..+.+++.+||+.||++||+++||++.|+++.++|+
T Consensus 269 --~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 269 --EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp --TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred --cCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 111223345667889999999999999999999999999999987764
No 53
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.9e-39 Score=360.50 Aligned_cols=283 Identities=33% Similarity=0.582 Sum_probs=230.4
Q ss_pred CCCCHHHHHHHhcCCCCc------ceeccCCcccEEEEEEcCCcEEEEEEccccc---chhhHHHHHHHHHHHhcCCCCc
Q 043720 809 VPLTYESIIRATGDFNTS------NCIGSGGFGTTYKAEISPGILVAVKKLAVGR---FQHGVQQFHAEIKTLGNVRHPN 879 (1103)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~------~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~n 879 (1103)
..+++.++..++++|... +.||+|+||+||+|.. +++.||||++.... .....+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457899999999998887 8999999999999986 48899999987542 2345678999999999999999
Q ss_pred eeEEEeEEecCCeEEEEEeecCCCChHHHHHhhc-CCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC
Q 043720 880 LVTLIGYRASGNEMFLIYNYLPGGNLENFIKART-SRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD 958 (1103)
Q Consensus 880 iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~ 958 (1103)
|+++++++.+.+..++||||+++++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999997543 34589999999999999999999999 9999999999999999
Q ss_pred CCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcch
Q 043720 959 DFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNI 1037 (1103)
Q Consensus 959 ~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~ 1037 (1103)
++.+||+|||++......... ......|++.|+|||.+.+ .++.++||||||+++|||++|+.||...... ...
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~ 243 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP----QLL 243 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS----SBT
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch----HHH
Confidence 999999999999876443222 2334578999999998865 4789999999999999999999999754321 122
Q ss_pred HHHHHHHHhcC-cccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1038 ISWASMLLRQG-QVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1038 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
..+........ .....++... ...+...+..+.+++.+||+.||++||++++++++|+++.+|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s 307 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred HHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence 22322222211 1222223222 334667788999999999999999999999999999999864
No 54
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=371.33 Aligned_cols=252 Identities=25% Similarity=0.388 Sum_probs=202.6
Q ss_pred HhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
..++|++.+.||+|+||+||+|.. .+|+.||||++.........+.+.+|+.++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 356899999999999999999975 5689999999977665555667899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++|+|.+++.... .+++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997754 399999999999999999999999 99999999999999999999999999998765444
Q ss_pred CccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... ............
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-------- 226 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--------VMALYKKIMRGK-------- 226 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC--------
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCC--------
Confidence 444556689999999999988775 889999999999999999999997321 122222222111
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 227 ---~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 227 ---YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ---CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 12233456778999999999999999999999975
No 55
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.7e-40 Score=360.67 Aligned_cols=257 Identities=24% Similarity=0.389 Sum_probs=217.3
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEeec
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNYL 900 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 900 (1103)
++|++.+.||+|+||+||+|...+++.||||++...... .+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 468899999999999999999988999999999765433 467899999999999999999999999999999999999
Q ss_pred CCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCcc
Q 043720 901 PGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETHA 980 (1103)
Q Consensus 901 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 980 (1103)
++++|.++++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++..........
T Consensus 88 ~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp TTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 9999999997644 4589999999999999999999999 99999999999999999999999999998765444344
Q ss_pred ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccccc
Q 043720 981 TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELW 1059 (1103)
Q Consensus 981 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1103)
.....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||.... .......... ...
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~--------~~~~~~~~~~----------~~~ 225 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDIST----------GFR 225 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHT----------TCC
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHHhc----------Ccc
Confidence 455667889999999998999999999999999999999 888886321 1111111111 111
Q ss_pred CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1060 ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1060 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
...+...+..+.+++.+||+.||++||+++|++++|+++..+
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 226 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 222344567899999999999999999999999999998754
No 56
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=365.64 Aligned_cols=259 Identities=27% Similarity=0.423 Sum_probs=213.7
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
++|.+.+.||+|+||+||+|... +++.||+|++... .....+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 56889999999999999999765 5899999988553 344567899999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 99999999998743 4589999999999999999999999 9999999999999999999999999999876433221
Q ss_pred c-------------ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHh
Q 043720 980 A-------------TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLR 1046 (1103)
Q Consensus 980 ~-------------~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1103)
. .....||+.|+|||++.+..++.++||||||+++|||++|..|+..............
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------- 236 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV-------- 236 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH--------
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh--------
Confidence 1 1245799999999999999999999999999999999999999875433221111100
Q ss_pred cCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1047 QGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
........+..++..+.+++.+||+.||++|||++|+++.|+++++
T Consensus 237 --------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 237 --------RGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp --------HHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------hccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0001111234455678999999999999999999999999999864
No 57
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.5e-40 Score=367.40 Aligned_cols=262 Identities=28% Similarity=0.434 Sum_probs=208.4
Q ss_pred HHhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 818 RATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 818 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
...++|++.+.||+|+||+||+|... ++.||||++..... ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 34567999999999999999999874 88999999876543 34467899999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcC-CcccHHHHHHHHHHHHHHHHHHHhCCCCC--cccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 897 YNYLPGGNLENFIKARTS-RAVDWKILHKIALDVASALAYLHDQCAPR--VLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
|||+++|+|.++++.... ..+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 999999999999986432 3489999999999999999999999 8 999999999999999999999999999754
Q ss_pred CCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 974 GTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 974 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... ........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ..........
T Consensus 190 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--------~~~~~~~~~~------ 254 (309)
T 3p86_A 190 AST-FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP--------AQVVAAVGFK------ 254 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--------HHHHHHHHHS------
T ss_pred ccc-ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhc------
Confidence 322 2233456789999999999999999999999999999999999999973211 1111111101
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
......+...+..+.+++.+||+.||++|||++|+++.|+.+.++
T Consensus 255 ---~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 255 ---CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp ---CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred ---CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 111233455667899999999999999999999999999998654
No 58
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.9e-40 Score=377.43 Aligned_cols=260 Identities=25% Similarity=0.459 Sum_probs=206.3
Q ss_pred cCCCCcceeccCCcccEEEEEEc----CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS----PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
++|++.+.||+|+||+||+|... .+..||||+++........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 47999999999999999999765 57789999998766666678899999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999998643 4589999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCc--cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 977 ETH--ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 977 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--------~~~~~~---------- 262 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--------QDVIKA---------- 262 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--------HHHHHH----------
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH----------
Confidence 221 1222345778999999999999999999999999999998 9999863211 111111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
+........+..++..+.+++.+||+.||++||+++||++.|+++.+.|
T Consensus 263 i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 1112223344566788999999999999999999999999999987654
No 59
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.2e-40 Score=381.36 Aligned_cols=259 Identities=24% Similarity=0.356 Sum_probs=215.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|.+. +++.||||++.........+.+.+|+.++++++||||+++++++...+..|+|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356888999999999999999876 6899999999866555556778999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|+++|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp CCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred cCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999998653 3489999999999999999999999 999999999999999999999999999986543222
Q ss_pred ccc-cCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 979 HAT-TGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 979 ~~~-~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
... ....+++.|+|||.+....++.++||||||+++|||++ |..||..... .. ...... .
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--------~~-~~~~~~---------~ 330 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--------QQ-TREFVE---------K 330 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--------HH-HHHHHH---------T
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HH-HHHHHH---------c
Confidence 211 12345778999999998889999999999999999998 8888863211 11 111111 1
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
......+..++..+.+++.+||+.||++|||++++++.|+++++
T Consensus 331 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 331 GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 12223455667889999999999999999999999999999875
No 60
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.4e-39 Score=357.77 Aligned_cols=258 Identities=24% Similarity=0.428 Sum_probs=217.5
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
.++|++.+.||+|+||+||+|+..++..||||++...... .+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 3578999999999999999999998889999999765433 46789999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++++|.++++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.........
T Consensus 85 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 85 ISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp CTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred cCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 99999999998753 3589999999999999999999999 9999999999999999999999999999877555444
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ........ .. .
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~-~~---------~ 222 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--------SEVVLKVS-QG---------H 222 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHH-TT---------C
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh--------HHHHHHHH-cC---------C
Confidence 4455667889999999998889999999999999999999 9999863211 11111111 11 1
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
....+...+..+.+++.+||+.||++|||++|++++|++++..
T Consensus 223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 223 RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 1122334567799999999999999999999999999999764
No 61
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.3e-39 Score=362.92 Aligned_cols=249 Identities=27% Similarity=0.410 Sum_probs=210.4
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|.. .+|+.||||++..... ....+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45799999999999999999976 5799999999976543 345677899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 9999999999998754 389999999999999999999999 9999999999999999999999999999876433
Q ss_pred CccccCCcccccccCccccccCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVS-DKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
......+||+.|+|||++.+..++ .++||||+||++|||++|+.||.... ............
T Consensus 168 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~-------- 230 (328)
T 3fe3_A 168 -GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------LKELRERVLRGK-------- 230 (328)
T ss_dssp -CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC--------
T ss_pred -CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC--------
Confidence 234556899999999999888765 78999999999999999999997321 122222222111
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 231 ---~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 ---YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ---CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ---CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 12234456778999999999999999999999875
No 62
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.8e-39 Score=358.92 Aligned_cols=251 Identities=24% Similarity=0.393 Sum_probs=210.4
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++...+..|+|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc-HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 35799999999999999999975 56899999998765433 35678999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|+++|+|.++++... +++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~~L~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 170 (297)
T 3fxz_A 98 YLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (297)
T ss_dssp CCTTCBHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred CCCCCCHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc-
Confidence 999999999998653 89999999999999999999999 99999999999999999999999999998764332
Q ss_pred ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 979 HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
.......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ............ .
T Consensus 171 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~~~~~~~--------~ 234 (297)
T 3fxz_A 171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--------LRALYLIATNGT--------P 234 (297)
T ss_dssp CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHHHHCS--------C
T ss_pred cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCC--------C
Confidence 234456799999999999999999999999999999999999999973211 111111111111 0
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....+...+..+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 235 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 112244566789999999999999999999999874
No 63
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3.2e-39 Score=364.95 Aligned_cols=272 Identities=27% Similarity=0.410 Sum_probs=212.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC----eEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN----EMFL 895 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l 895 (1103)
.++|++.+.||+|+||+||+|+.. ++.||||++..... ....+.+|+.++++++||||+++++++.... .+++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK--QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch--HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 457999999999999999999877 89999999875432 3455667999999999999999999987743 4799
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC-------CCCcccCCCCCCcEEECCCCCEEEeecc
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQC-------APRVLHRDVKPSNILLDDDFNAYLSDFG 968 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------~~~ivH~Dlk~~NIll~~~~~~ki~Dfg 968 (1103)
||||+++|+|.++++... +++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||
T Consensus 100 v~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp EEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEecCCCCCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999997643 999999999999999999999752 3389999999999999999999999999
Q ss_pred cccccCCCCCc-cccCCcccccccCcccccc-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCc-------
Q 043720 969 LSRLLGTSETH-ATTGVAGTFGYVAPEYALT-----CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGF------- 1035 (1103)
Q Consensus 969 la~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~------- 1035 (1103)
+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 99876543322 2344679999999999976 3556688999999999999999999975443222111
Q ss_pred -chHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1036 -NIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1036 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
....+.... ............. .....+..+.+++.+||+.||++|||++||++.|++|++.
T Consensus 257 ~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 257 PSLEDMQEVV-VHKKKRPVLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp CCHHHHHHHH-TTSCCCCCCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred Cchhhhhhhh-hcccCCCCccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111111111 1111111111111 1235667799999999999999999999999999998753
No 64
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7.4e-39 Score=356.94 Aligned_cols=262 Identities=24% Similarity=0.433 Sum_probs=210.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57999999999999999999754 689999999865432 344678999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++++|.++++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp ECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999998764 489999999999999999999999 99999999999999999999999999998765444
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
........||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ........... .. .
T Consensus 166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~~-~~-----~ 231 (294)
T 4eqm_A 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA--------VSIAIKHIQDS-VP-----N 231 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH--------HHHHHHHHSSC-CC-----C
T ss_pred ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhhcc-CC-----C
Confidence 4444556799999999999999999999999999999999999999974321 11111111111 10 1
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhcC
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRP-TMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~ 1101 (1103)
.........+..+.+++.+|++.||++|| +++++.+.|+++.+.
T Consensus 232 ~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~ 276 (294)
T 4eqm_A 232 VTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHE 276 (294)
T ss_dssp HHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSS
T ss_pred cchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhh
Confidence 11112344567899999999999999999 999999999987654
No 65
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.3e-39 Score=385.60 Aligned_cols=257 Identities=23% Similarity=0.415 Sum_probs=216.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
.++|++.+.||+|+||+||+|.+.++..||||+++.... ..+.+.+|+.++++++||||+++++++. .+..|+||||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~ 263 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEF 263 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEee
Confidence 346888999999999999999998899999999976542 4678999999999999999999999986 5678999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++|+|.++++......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 264 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 340 (454)
T 1qcf_A 264 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT 340 (454)
T ss_dssp CTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee
Confidence 9999999999876544588999999999999999999999 9999999999999999999999999999876443333
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
......+++.|+|||++....++.++|||||||++|||++ |+.||.... ......... ...
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--------~~~~~~~i~----------~~~ 402 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--------NPEVIRALE----------RGY 402 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHHHHH----------HTC
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHH----------cCC
Confidence 3344556889999999998899999999999999999999 999986321 111111111 112
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
....+..++..+.++|.+||+.||++|||+++|++.|+++..
T Consensus 403 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 403 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 223455677889999999999999999999999999999864
No 66
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.8e-40 Score=376.39 Aligned_cols=271 Identities=23% Similarity=0.358 Sum_probs=221.4
Q ss_pred CCCHHHHHHHhcCCCCcceeccCCcccEEEEEE------cCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeE
Q 043720 810 PLTYESIIRATGDFNTSNCIGSGGFGTTYKAEI------SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVT 882 (1103)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 882 (1103)
|+...+++...++|++.+.||+|+||+||+|.+ .+++.||||++.........+.+.+|+.+++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 455566666778999999999999999999964 245889999998776666678899999999999 7999999
Q ss_pred EEeEEecCC-eEEEEEeecCCCChHHHHHhhcC-----------------------------------------------
Q 043720 883 LIGYRASGN-EMFLIYNYLPGGNLENFIKARTS----------------------------------------------- 914 (1103)
Q Consensus 883 l~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~----------------------------------------------- 914 (1103)
+++++.+.+ ..++||||+++|+|.++++....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999988754 58999999999999999986542
Q ss_pred -----------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 915 -----------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 915 -----------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1288999999999999999999999 99999999999999999999999999998664333
Q ss_pred C-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 978 T-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 978 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
. .......||+.|+|||++.+..++.++||||||+++|||++ |+.||...... ..........
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------~~~~~~~~~~------- 312 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------EEFCRRLKEG------- 312 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS--------HHHHHHHHHT-------
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh--------HHHHHHHHcC-------
Confidence 2 23345678899999999999999999999999999999998 99998633211 1111111111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.....+...+..+.+++.+||+.||++||+++|++++|+++.+
T Consensus 313 --~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 313 --TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 1122344556789999999999999999999999999999864
No 67
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=374.62 Aligned_cols=261 Identities=21% Similarity=0.340 Sum_probs=215.8
Q ss_pred cCCCCcceeccCCcccEEEEEEc------CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
++|++.+.||+|+||+||+|.+. +++.||||++...........+.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56889999999999999999753 467899999987666666778999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhhcC-----CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC---CEEEee
Q 043720 895 LIYNYLPGGNLENFIKARTS-----RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF---NAYLSD 966 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~D 966 (1103)
+||||+++|+|.++++.... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 99999999999999987542 3589999999999999999999999 999999999999999555 599999
Q ss_pred cccccccCCCCC-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHH
Q 043720 967 FGLSRLLGTSET-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASML 1044 (1103)
Q Consensus 967 fgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1103)
||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ........
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--------~~~~~~~i 299 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--------NQEVLEFV 299 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHHHH
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH
Confidence 999976532222 22334567899999999999999999999999999999998 888886321 11112111
Q ss_pred HhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1045 LRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
... .....+..++..+.+++.+||+.||++||+++||+++|+.+.+.|
T Consensus 300 ~~~----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 300 TSG----------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HTT----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HcC----------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 111 112234456678999999999999999999999999999987654
No 68
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3e-39 Score=358.36 Aligned_cols=258 Identities=26% Similarity=0.415 Sum_probs=214.2
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
.++|++.+.||+|+||+||+|.+.++..||||++...... .+++.+|+.++++++||||+++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC--HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 4578899999999999999999998899999999765433 46789999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++++|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT 176 (283)
T ss_dssp CTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccccccc
Confidence 99999999998643 3489999999999999999999999 9999999999999999999999999999876544333
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... ........ . ..
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~~-~---------~~ 238 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--------SETAEHIA-Q---------GL 238 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHH-T---------TC
T ss_pred cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh--------hHHHHHHh-c---------cc
Confidence 4445567889999999998899999999999999999998 9999873211 11111111 1 11
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
....+...+..+.+++.+||+.||++||+++|++++|+++...
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 239 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1222344567899999999999999999999999999998643
No 69
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3e-39 Score=386.11 Aligned_cols=258 Identities=24% Similarity=0.428 Sum_probs=218.7
Q ss_pred cCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
.+|++.+.||+|+||+||+|.+.. +..||||+++.... ..+.|.+|+.++++++||||+++++++...+..|+||||
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 468889999999999999998775 88999999976533 357899999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++|+|.++++......+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 9999999999876666699999999999999999999999 9999999999999999999999999999876544333
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
......+++.|+|||++....++.++|||||||++|||++ |+.||..... .... . .+....
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~-----~~~~---~----------~~~~~~ 436 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVY---E----------LLEKDY 436 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHH---H----------HHHTTC
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH-----HHHH---H----------HHHcCC
Confidence 3445567789999999998899999999999999999999 8888863221 1111 1 111122
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
....+..++..+.++|.+||+.||++||++++|++.|+++.+.
T Consensus 437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 2334566778899999999999999999999999999998654
No 70
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=372.27 Aligned_cols=260 Identities=25% Similarity=0.414 Sum_probs=218.2
Q ss_pred hcCCCCcceeccCCcccEEEEEEc--------CCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecC
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS--------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASG 890 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 890 (1103)
.++|.+.+.||+|+||+||+|... .+..||||++.........+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357889999999999999999753 24679999998776666778899999999999 899999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhhcC--------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE
Q 043720 891 NEMFLIYNYLPGGNLENFIKARTS--------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL 956 (1103)
Q Consensus 891 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll 956 (1103)
+..++||||+++|+|.++++.... ..+++.++++++.|++.||+|||++ +|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999987542 3589999999999999999999999 99999999999999
Q ss_pred CCCCCEEEeecccccccCCCCC-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 043720 957 DDDFNAYLSDFGLSRLLGTSET-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDG 1034 (1103)
Q Consensus 957 ~~~~~~ki~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~ 1034 (1103)
++++.+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~------ 298 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP------ 298 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC------
Confidence 9999999999999987654332 23344567889999999999999999999999999999999 998886321
Q ss_pred cchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1035 FNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
........ ..+ .....+..++.++.+++.+||+.||++||+++||+++|+++.+
T Consensus 299 --~~~~~~~~-~~~---------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 299 --VEELFKLL-KEG---------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp --HHHHHHHH-HTT---------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHHHH-HcC---------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11122111 111 1222344567789999999999999999999999999999854
No 71
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-39 Score=367.75 Aligned_cols=262 Identities=26% Similarity=0.422 Sum_probs=217.6
Q ss_pred HhcCCCCcceeccCCcccEEEEEEc------CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCe
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEIS------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNE 892 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 892 (1103)
..++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.++++++||||+++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 3568999999999999999999775 3488999999876666667889999999999999999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcC----------------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCC
Q 043720 893 MFLIYNYLPGGNLENFIKARTS----------------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVK 950 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk 950 (1103)
.++||||+++|+|.++++.... ..+++.+++.++.||++||+|||++ +|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCC
Confidence 9999999999999999987421 4589999999999999999999999 99999999
Q ss_pred CCcEEECCCCCEEEeecccccccCCCCC-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 043720 951 PSNILLDDDFNAYLSDFGLSRLLGTSET-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSF 1028 (1103)
Q Consensus 951 ~~NIll~~~~~~ki~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~ 1028 (1103)
|+||+++.++.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999987643322 22334567899999999998899999999999999999999 888986321
Q ss_pred CCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1029 SSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
....... ...+. ....+..++..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 282 --------~~~~~~~-~~~~~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 282 --------HEEVIYY-VRDGN---------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp --------HHHHHHH-HHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred --------hHHHHHH-HhCCC---------cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 1111111 11111 1123445667899999999999999999999999999998754
No 72
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.5e-39 Score=363.55 Aligned_cols=261 Identities=25% Similarity=0.393 Sum_probs=218.1
Q ss_pred hcCCCCcceeccCCcccEEEEEE------cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI------SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM 893 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 893 (1103)
.++|.+.+.||+|+||+||+|.. .+++.||||++.........+.+.+|+.++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45789999999999999999975 235889999998766666678899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhhcC----------------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCC
Q 043720 894 FLIYNYLPGGNLENFIKARTS----------------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKP 951 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~ 951 (1103)
++||||+++++|.++++.... ..+++.+++.++.|++.||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999987532 3489999999999999999999999 999999999
Q ss_pred CcEEECCCCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCC
Q 043720 952 SNILLDDDFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFS 1029 (1103)
Q Consensus 952 ~NIll~~~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~ 1029 (1103)
+||+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999876443322 2334467889999999998889999999999999999999 9999863321
Q ss_pred CCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1030 SHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
... . ...... .....+..++..+.+++.+||+.||++||+++|++++|+++...
T Consensus 259 -----~~~---~-~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 -----ERL---F-NLLKTG---------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp -----GGH---H-HHHHTT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----HHH---H-HHhhcC---------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 111 1 111111 11223445678899999999999999999999999999998653
No 73
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.7e-38 Score=358.05 Aligned_cols=249 Identities=23% Similarity=0.291 Sum_probs=209.4
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEccccc--chhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGR--FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|+.. +++.||||++.... .....+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57899999999999999999765 58999999997653 2334677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp ECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 9999999999998654 489999999999999999999999 9999999999999999999999999999864322
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ............
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~--------- 221 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILMEE--------- 221 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC---------
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--------HHHHHHHHHcCC---------
Confidence 223445689999999999999999999999999999999999999997321 111222221111
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRP-----TMKQVVQC 1094 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++|| +++|++++
T Consensus 222 --~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 --IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 123445667899999999999999999 89999865
No 74
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.5e-38 Score=356.02 Aligned_cols=263 Identities=23% Similarity=0.322 Sum_probs=216.1
Q ss_pred CCCCCHHHHHHHhcC----------CCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCC
Q 043720 808 GVPLTYESIIRATGD----------FNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR 876 (1103)
Q Consensus 808 ~~~~~~~~~~~~~~~----------~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 876 (1103)
..+++++++..+++. |+..+.||+|+||+||+|... +|+.||||++..... ...+.+.+|+.++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~ 100 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQ 100 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CSHHHHHHHHHHHTTCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch-hHHHHHHHHHHHHHhCC
Confidence 356788888887764 666789999999999999876 699999999875543 34677889999999999
Q ss_pred CCceeEEEeEEecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE
Q 043720 877 HPNLVTLIGYRASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL 956 (1103)
Q Consensus 877 h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll 956 (1103)
||||+++++++...+..++||||+++++|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll 174 (321)
T 2c30_A 101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILL 174 (321)
T ss_dssp CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEE
T ss_pred CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEE
Confidence 999999999999999999999999999999998753 489999999999999999999999 99999999999999
Q ss_pred CCCCCEEEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcc
Q 043720 957 DDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFN 1036 (1103)
Q Consensus 957 ~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~ 1036 (1103)
+.++.+||+|||++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 175 ~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-------- 245 (321)
T 2c30_A 175 TLDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-------- 245 (321)
T ss_dssp CTTCCEEECCCTTCEECCSSS-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------
T ss_pred CCCCcEEEeeeeeeeecccCc-cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------
Confidence 999999999999998764332 23345679999999999999999999999999999999999999997321
Q ss_pred hHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1037 IISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.......... .... . .......+..+.+++.+||+.||++||+++|++++
T Consensus 246 ~~~~~~~~~~-~~~~-----~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 246 PVQAMKRLRD-SPPP-----K--LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HHHHHHHHHH-SSCC-----C--CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHhc-CCCC-----C--cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111111 1100 0 11223456779999999999999999999999975
No 75
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.6e-39 Score=355.72 Aligned_cols=258 Identities=25% Similarity=0.381 Sum_probs=202.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEcC----CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISP----GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
.++|++.+.||+|+||+||+|.... +..||+|++.........+.+.+|+..+++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3578999999999999999997643 46799999887666666788999999999999999999999985 457899
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+++++|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999998653 3589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
..........+++.|+|||++....++.++||||||+++|||++ |..||..... .. ...... ..
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~~---~~~~i~-~~------ 233 (281)
T 1mp8_A 169 STYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----ND---VIGRIE-NG------ 233 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GG---HHHHHH-TT------
T ss_pred ccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----HH---HHHHHH-cC------
Confidence 44333444567889999999998899999999999999999997 8888874321 11 111111 11
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.....+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 234 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 234 ---ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1122345667889999999999999999999999999999854
No 76
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.7e-39 Score=364.43 Aligned_cols=259 Identities=25% Similarity=0.445 Sum_probs=206.4
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCc----EEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGI----LVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
++|++.+.||+|+||+||+|.+. +++ .||+|++.........+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46899999999999999999754 343 468888876655556788999999999999999999999998765 789
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
|+||+.+|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999998754 4589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 976 SETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 976 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
.... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ... ...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~----~~~--------- 231 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEI----SSI--------- 231 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGH----HHH---------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----HHH----HHH---------
Confidence 3332 2334456889999999999999999999999999999999 9999874321 111 111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
+........+..++..+.+++.+||+.||++||+++|++++|+++.+.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 232 LEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 1111122334556778999999999999999999999999999987643
No 77
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.1e-38 Score=377.22 Aligned_cols=252 Identities=26% Similarity=0.418 Sum_probs=211.7
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC-eEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN-EMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lV~E~ 899 (1103)
++|++.+.||+|+||+||+|.+. ++.||||+++... ..+.+.+|+.++++++||||+++++++.... ..|+||||
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 46888999999999999999887 7899999997654 3577999999999999999999999987654 79999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++|+|.++++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 9999999999987655679999999999999999999999 9999999999999999999999999999854321
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
.....+++.|+|||++.+..++.++||||||+++|||++ |+.||...... . .... +. ...
T Consensus 343 -~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~---~~~~-i~---------~~~ 403 (450)
T 1k9a_A 343 -QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----D---VVPR-VE---------KGY 403 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT-----T---HHHH-HH---------TTC
T ss_pred -ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----H---HHHH-HH---------cCC
Confidence 122356889999999999999999999999999999998 99998643211 1 1111 11 112
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
....+..++..+.++|.+||+.||++||+++++++.|++|...
T Consensus 404 ~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 404 KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 2334566788999999999999999999999999999998754
No 78
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=7.9e-39 Score=357.23 Aligned_cols=267 Identities=24% Similarity=0.428 Sum_probs=210.4
Q ss_pred cCCCCcceeccCCcccEEEEEE-----cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecC--CeE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-----SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG--NEM 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 893 (1103)
++|++.+.||+|+||+||+|.+ .+++.||||++.... ....+.+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 5789999999999999999974 358899999987543 34567899999999999999999999998553 568
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
++||||+++|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 99999999999999998754 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC--ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcC---
Q 043720 974 GTSET--HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQG--- 1048 (1103)
Q Consensus 974 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 1048 (1103)
..... .......++..|+|||.+.+..++.++||||||+++|||++|..|+..... .+........
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~---------~~~~~~~~~~~~~ 235 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA---------EFMRMIGNDKQGQ 235 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH---------HHHHHHCTTCCTH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH---------HHHhhhcCccccc
Confidence 43322 122344577889999999999999999999999999999999998863211 0000000000
Q ss_pred ----cccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1049 ----QVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1049 ----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
...+.+........+..++..+.+++.+||+.||++|||++|+++.|++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 236 MIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 00011111222334566778899999999999999999999999999998754
No 79
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.1e-39 Score=380.95 Aligned_cols=257 Identities=26% Similarity=0.432 Sum_probs=209.6
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEeec
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNYL 900 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 900 (1103)
++|++.+.||+|+||+||+|.+..+..||||+++.... ..+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 46888999999999999999999888999999976543 34679999999999999999999999876 6789999999
Q ss_pred CCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCcc
Q 043720 901 PGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETHA 980 (1103)
Q Consensus 901 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 980 (1103)
++|+|.++++...+..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.........
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 337 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 337 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceec
Confidence 999999999875555689999999999999999999999 99999999999999999999999999998765433333
Q ss_pred ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccccc
Q 043720 981 TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELW 1059 (1103)
Q Consensus 981 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1103)
.....+++.|+|||.+....++.++||||||+++|||++ |+.||..... ....... .. ...
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i-~~---------~~~ 399 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQV-ER---------GYR 399 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHH-HT---------TCC
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH-Hc---------CCC
Confidence 445567889999999998899999999999999999999 8888863211 1111111 11 122
Q ss_pred CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1060 ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1060 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
...+..++..+.++|.+||+.||++|||++++++.|+++..+
T Consensus 400 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 234556778899999999999999999999999999998643
No 80
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.7e-38 Score=353.94 Aligned_cols=262 Identities=23% Similarity=0.381 Sum_probs=202.1
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhc--CCCCceeEEEeEEec----CCeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGN--VRHPNLVTLIGYRAS----GNEM 893 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~----~~~~ 893 (1103)
.++|++.+.||+|+||+||+|.. +++.||||++... ....+.+|.+++.. ++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 45799999999999999999987 5899999998654 23445555555555 799999999998644 3568
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHH--------hCCCCCcccCCCCCCcEEECCCCCEEEe
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLH--------DQCAPRVLHRDVKPSNILLDDDFNAYLS 965 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~ki~ 965 (1103)
++||||+++|+|.++++.. .+++..+.+++.|++.||+||| +. +|+||||||+||+++.++.+||+
T Consensus 82 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEEC
T ss_pred EEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEe
Confidence 9999999999999999653 4999999999999999999999 77 99999999999999999999999
Q ss_pred ecccccccCCCCCcc---ccCCcccccccCccccccC------CCCCcchhHHHHHHHHHHHhC----------CCCCCC
Q 043720 966 DFGLSRLLGTSETHA---TTGVAGTFGYVAPEYALTC------RVSDKADVYSYGVVLLELISD----------KKALDP 1026 (1103)
Q Consensus 966 Dfgla~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslGvil~elltg----------~~p~~~ 1026 (1103)
|||+++......... .....||+.|+|||++.+. .++.++||||||+++|||++| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 999997664333221 2345799999999999876 455789999999999999999 777754
Q ss_pred CCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1027 SFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
...... .... ................. ......+..+.+++.+||+.||++|||++||++.|++|.
T Consensus 236 ~~~~~~---~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 236 VVPNDP---SFED-MRKVVCVDQQRPNIPNR---WFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp TSCSSC---CHHH-HHHHHTTSCCCCCCCGG---GGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred cCCCCc---chhh-hhHHHhccCCCCCCChh---hccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 332211 1111 11111111111111111 123457788999999999999999999999999999873
No 81
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.2e-38 Score=350.86 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=211.3
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecC--CeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG--NEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... ++.||||++..... ....+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46999999999999999999886 89999999986543 34567799999999999999999999999887 7889999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCC--cccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPR--VLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||+++|+|.++++......+++.++..++.|++.||+|||++ + |+||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 999999999999876655689999999999999999999998 7 9999999999999999999999999875432
Q ss_pred CCCccccCCcccccccCccccccCCCCC---cchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSD---KADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKD 1052 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1103)
.....||+.|+|||.+.+..++. ++||||||+++|||++|+.||.... ...........
T Consensus 165 -----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~----- 226 (271)
T 3kmu_A 165 -----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS--------NMEIGMKVALE----- 226 (271)
T ss_dssp -----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC--------HHHHHHHHHHS-----
T ss_pred -----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC--------hHHHHHHHHhc-----
Confidence 22346799999999998765544 7999999999999999999997321 11111111111
Q ss_pred cccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1053 VFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
......+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 227 ----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 227 ----GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11223345567789999999999999999999999999999874
No 82
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=353.51 Aligned_cols=269 Identities=19% Similarity=0.225 Sum_probs=216.3
Q ss_pred cCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC--eEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN--EMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|.... ++.||||++.........+.+.+|+.++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 468999999999999999997664 89999999987665556788899999999999999999999987755 789999
Q ss_pred eecCCCChHHHHHhhcC-CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE----CCCCCEEEeecccccc
Q 043720 898 NYLPGGNLENFIKARTS-RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL----DDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~ki~Dfgla~~ 972 (1103)
||+++++|.++++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999987543 3389999999999999999999999 99999999999999 7888899999999987
Q ss_pred cCCCCCccccCCcccccccCccccc--------cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHH
Q 043720 973 LGTSETHATTGVAGTFGYVAPEYAL--------TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASML 1044 (1103)
Q Consensus 973 ~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1103)
..... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.+..... .........
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~ 239 (319)
T 4euu_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR----RNKEVMYKI 239 (319)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG----GCHHHHHHH
T ss_pred cCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc----hhHHHHHHH
Confidence 64332 233457899999999986 5678899999999999999999999997443221 112222222
Q ss_pred HhcCcccc---c---c--------cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 043720 1045 LRQGQVKD---V---F--------NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQI 1098 (1103)
Q Consensus 1045 ~~~~~~~~---~---~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1098 (1103)
........ . . +.......+...+..+.+++.+||+.||++||+++|++++..+.
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 22111000 0 0 00111123467788899999999999999999999999998865
No 83
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.2e-38 Score=363.84 Aligned_cols=258 Identities=19% Similarity=0.291 Sum_probs=207.0
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 895 (1103)
.++|++.+.||+|+||+||+|+.+ +++.||||+++.... ....+.+.+|..++.++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357999999999999999999766 478999999976543 22345678899999887 89999999999999999999
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+++|+|.++++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999998754 499999999999999999999999 999999999999999999999999999985322
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||.........................
T Consensus 206 -~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------ 278 (396)
T 4dc2_A 206 -PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------ 278 (396)
T ss_dssp -TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC------
T ss_pred -CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc------
Confidence 2233456789999999999999999999999999999999999999997443222211112222222221111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTM------KQVVQ 1093 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 1093 (1103)
...+...+..+.+++.+||+.||++||++ +||++
T Consensus 279 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 279 ----IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred ----cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 12344566789999999999999999985 56654
No 84
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=6.1e-38 Score=351.65 Aligned_cols=262 Identities=27% Similarity=0.425 Sum_probs=206.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|.+.+.||+|+||+||+|.... .+|+|+++.... ....+.+.+|+.++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 3579999999999999999997653 589998876433 3456789999999999999999999998754 55889999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC-C
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS-E 977 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~-~ 977 (1103)
|+++++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... .
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999997543 4589999999999999999999999 9999999999999999999999999999765322 2
Q ss_pred CccccCCcccccccCccccc---cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 978 THATTGVAGTFGYVAPEYAL---TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
........||+.|+|||++. +..++.++||||||+++|||++|+.||..... ..........+...
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~--------~~~~~~~~~~~~~~--- 256 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--------RDQIIFMVGRGYAS--- 256 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--------HHHHHHHHHHTCCC---
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc--------HHHHHHHHhcCCCC---
Confidence 22334557899999999986 66788899999999999999999999973321 11111111111110
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
+ ........++..+.+++.+||+.+|++||++.|++++|+.++++
T Consensus 257 -~-~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 257 -P-DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp -C-CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred -c-chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 1 11122345668899999999999999999999999999998764
No 85
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.5e-39 Score=351.02 Aligned_cols=257 Identities=25% Similarity=0.390 Sum_probs=215.9
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEeec
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNYL 900 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 900 (1103)
++|++.+.||+|+||+||+|...+++.||+|++...... .+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 468889999999999999999988999999999765433 367899999999999999999999999999999999999
Q ss_pred CCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCcc
Q 043720 901 PGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETHA 980 (1103)
Q Consensus 901 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~ 980 (1103)
++++|.++++... ..+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++..........
T Consensus 86 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 161 (267)
T ss_dssp TTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccccccc
Confidence 9999999998653 4589999999999999999999999 99999999999999999999999999998764433333
Q ss_pred ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccccc
Q 043720 981 TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELW 1059 (1103)
Q Consensus 981 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1103)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||.... ......... .+ ..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~i~-~~---------~~ 223 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDIS-TG---------FR 223 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHH-TT---------CC
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--------HHHHHHHHh-cC---------Cc
Confidence 345567889999999998889999999999999999999 888886321 111111111 11 11
Q ss_pred CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1060 ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1060 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
...+...+..+.+++.+||+.||++||+++|++++|+++.++
T Consensus 224 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 224 LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 122344567899999999999999999999999999998754
No 86
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6e-39 Score=356.88 Aligned_cols=259 Identities=25% Similarity=0.418 Sum_probs=219.6
Q ss_pred HhcCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
..++|++.+.||+|+||+||+|.... +..||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 45679999999999999999997764 8899999987543 34678899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++++|.++++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999999999886666799999999999999999999999 99999999999999999999999999998776554
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
........+++.|+|||++.+..++.++||||+|+++|+|++ |..||..... .. .... +..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~-----~~---~~~~----------~~~ 227 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQ---VYEL----------LEK 227 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GG---HHHH----------HHT
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HH---HHHH----------Hhc
Confidence 444555667889999999998899999999999999999999 8888863221 11 1111 111
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
......+..++..+.+++.+|++.||++||+++|+++.|+++.+
T Consensus 228 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~ 271 (288)
T 3kfa_A 228 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271 (288)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence 12223345667889999999999999999999999999998753
No 87
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.2e-39 Score=360.37 Aligned_cols=261 Identities=26% Similarity=0.406 Sum_probs=217.3
Q ss_pred hcCCCCcceeccCCcccEEEEEE------cCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI------SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNE 892 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 892 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++.........+.+.+|+.+++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45799999999999999999975 346889999998766655678899999999999 89999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcC----------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE
Q 043720 893 MFLIYNYLPGGNLENFIKARTS----------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL 956 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll 956 (1103)
.++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 9999999999999999987543 2489999999999999999999999 99999999999999
Q ss_pred CCCCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 043720 957 DDDFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDG 1034 (1103)
Q Consensus 957 ~~~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~ 1034 (1103)
+.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~ 254 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----D 254 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS----S
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc----h
Confidence 99999999999999876544332 2334567889999999999899999999999999999999 9988864321 1
Q ss_pred cchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1035 FNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
......... ......+...+..+.+++.+||+.||++||+++|++++|+++..
T Consensus 255 ----~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 255 ----SKFYKMIKE---------GFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp ----HHHHHHHHH---------TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----hHHHHHhcc---------CCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 111111111 11122234566789999999999999999999999999998754
No 88
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-39 Score=367.48 Aligned_cols=263 Identities=22% Similarity=0.348 Sum_probs=212.8
Q ss_pred HhcCCCCcceeccCCcccEEEEEE------cCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCC
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEI------SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGN 891 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 891 (1103)
..++|++.+.||+|+||+||+|.. ..+..||||++.........+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 456799999999999999999975 246789999998665555567899999999999 8999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhhcC---------------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCC
Q 043720 892 EMFLIYNYLPGGNLENFIKARTS---------------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVK 950 (1103)
Q Consensus 892 ~~~lV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk 950 (1103)
..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCC
Confidence 99999999999999999986542 2378999999999999999999999 99999999
Q ss_pred CCcEEECCCCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 043720 951 PSNILLDDDFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSF 1028 (1103)
Q Consensus 951 ~~NIll~~~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~ 1028 (1103)
|+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999999876433322 2334567889999999998899999999999999999998 999986432
Q ss_pred CCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1029 SSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
. . ......... ......+...+..+.+++.+||+.||++||++.|++++|+.+.+.
T Consensus 280 ~----~----~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 280 V----D----ANFYKLIQN---------GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp C----S----HHHHHHHHT---------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred c----H----HHHHHHHhc---------CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 1 1 111111111 112223445678899999999999999999999999999998664
No 89
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.2e-38 Score=358.44 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=208.5
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchh-----hHHHHHHHHHHHhcCCCCceeEEEeEEecCCeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQH-----GVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM 893 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 893 (1103)
.++|++.+.||+|+||+||+|... +|+.||||++....... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457999999999999999999765 58999999997654321 357899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC----CEEEeeccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF----NAYLSDFGL 969 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~ki~Dfgl 969 (1103)
|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 99999999999999997643 499999999999999999999999 999999999999998877 799999999
Q ss_pred ccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc
Q 043720 970 SRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ 1049 (1103)
Q Consensus 970 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1103)
+...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||.... .......+....
T Consensus 166 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--------~~~~~~~i~~~~- 234 (361)
T 2yab_A 166 AHEIEDG--VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITAVS- 234 (361)
T ss_dssp CEECCTT--CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTC-
T ss_pred ceEcCCC--CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhcC-
Confidence 9876432 22345679999999999999999999999999999999999999997321 111222211111
Q ss_pred ccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1050 VKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. .++... ....+..+.++|.+||..||++|||+.|++++
T Consensus 235 ~--~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 235 Y--DFDEEF----FSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp C--CCCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred C--CCCchh----ccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 111111 12345678999999999999999999999863
No 90
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=6.7e-39 Score=362.05 Aligned_cols=253 Identities=26% Similarity=0.377 Sum_probs=204.8
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.+++.++||||+++++++.+++..|+||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57999999999999999999766 68999999997665554557789999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC-
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET- 978 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~- 978 (1103)
+++|+|.++++... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..+.....
T Consensus 87 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 87 CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999987543 489999999999999999999999 999999999999999999999999999986543222
Q ss_pred ccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 979 HATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ......+ ... .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~~~----~~~---------~ 225 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDW----KEK---------K 225 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT---SHHHHHH----HTT---------C
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHH----hcc---------c
Confidence 22345679999999999987765 77899999999999999999999743221 1111111 111 1
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.........+..+.+++.+||+.||++|||++|++++
T Consensus 226 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 226 TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1111123456778999999999999999999999875
No 91
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.3e-38 Score=355.80 Aligned_cols=257 Identities=20% Similarity=0.295 Sum_probs=207.4
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 896 (1103)
++|++.+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+.++.++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46899999999999999999775 588999999976543 33456788999999988 899999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++|+|.++++... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999998754 489999999999999999999999 9999999999999999999999999999854222
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||.........................
T Consensus 164 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------- 235 (345)
T 3a8x_A 164 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------- 235 (345)
T ss_dssp -TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-------
T ss_pred -CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-------
Confidence 223445689999999999999999999999999999999999999997432221111111111111111111
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTM------KQVVQ 1093 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 1093 (1103)
...+...+..+.+++.+||+.||++||++ +|+++
T Consensus 236 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 236 ---IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred ---CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 12344566789999999999999999996 56654
No 92
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=2.9e-38 Score=355.14 Aligned_cols=264 Identities=23% Similarity=0.365 Sum_probs=204.8
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|...+++.||||++...... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 3679999999999999999999888999999999765433 235678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|++ ++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 100 FME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp CCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred CCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 997 58888887643 4589999999999999999999999 99999999999999999999999999998764332
Q ss_pred ccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccc------
Q 043720 979 HATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVK------ 1051 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 1051 (1103)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ................
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-----DQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-----THHHHHHHHHCCCCTTTSGGGT
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHHCCCChHHhhhhh
Confidence 23344578999999999876 56899999999999999999999999743221 1111111111111000
Q ss_pred ----------ccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1052 ----------DVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1052 ----------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..++...+.........++.+++.+|++.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0000000011112345678999999999999999999999974
No 93
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.7e-39 Score=364.48 Aligned_cols=266 Identities=24% Similarity=0.398 Sum_probs=217.8
Q ss_pred HHHHHhcCCCCcceeccCCcccEEEEEEcC------CcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEE
Q 043720 815 SIIRATGDFNTSNCIGSGGFGTTYKAEISP------GILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYR 887 (1103)
Q Consensus 815 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 887 (1103)
+++...++|++.+.||+|+||+||+|.... ...||+|++.........+.+.+|+.+++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344456789999999999999999997653 2479999998776666678899999999999 899999999999
Q ss_pred ecCCeEEEEEeecCCCChHHHHHhhc------------CCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEE
Q 043720 888 ASGNEMFLIYNYLPGGNLENFIKART------------SRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNIL 955 (1103)
Q Consensus 888 ~~~~~~~lV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIl 955 (1103)
...+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 99999999999999999999997643 23478999999999999999999999 9999999999999
Q ss_pred ECCCCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCC
Q 043720 956 LDDDFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGD 1033 (1103)
Q Consensus 956 l~~~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~ 1033 (1103)
++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---- 272 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV---- 272 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS----
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch----
Confidence 999999999999999866433222 2334567889999999998899999999999999999999 8888863221
Q ss_pred CcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1034 GFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
. .......... .....+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 273 ~----~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 273 N----SKFYKLVKDG---------YQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp S----HHHHHHHHHT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred h----HHHHHHHhcC---------CCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 1 1111111111 1122234456789999999999999999999999999998754
No 94
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.9e-38 Score=349.95 Aligned_cols=258 Identities=24% Similarity=0.355 Sum_probs=209.7
Q ss_pred hcCCCCcceeccCCcccEEEEEEcC----CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISP----GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
.++|++.+.||+|+||+||+|.... +..||||++.........+.+.+|+.++++++||||+++++++.++ ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4578999999999999999997543 3469999998776666678899999999999999999999998754 5689
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+++++|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999997653 4589999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
..........+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ... ..... ..
T Consensus 166 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----~~~---~~~~~-~~------ 230 (281)
T 3cc6_A 166 EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----KDV---IGVLE-KG------ 230 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----GGH---HHHHH-HT------
T ss_pred ccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----HHH---HHHHh-cC------
Confidence 44444445567889999999998899999999999999999998 9999863221 111 11111 11
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.....+..++..+.+++.+||+.||++||+++|++++|+++.+
T Consensus 231 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 231 ---DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 1122334456789999999999999999999999999998764
No 95
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.6e-38 Score=350.15 Aligned_cols=255 Identities=27% Similarity=0.435 Sum_probs=198.1
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc---hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF---QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|... ++.||||++..... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357899999999999999999876 89999999876533 22357789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC--------CCCEEEeecc
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD--------DFNAYLSDFG 968 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~--------~~~~ki~Dfg 968 (1103)
|||+++++|.++++.. .+++..+..++.|++.|++|||++...+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 9999999999998643 4899999999999999999999991112999999999999986 6789999999
Q ss_pred cccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcC
Q 043720 969 LSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQG 1048 (1103)
Q Consensus 969 la~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1103)
++....... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ........ ..
T Consensus 162 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~-~~ 229 (271)
T 3dtc_A 162 LAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG--------LAVAYGVA-MN 229 (271)
T ss_dssp C----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH--------HHHHHHHH-TS
T ss_pred ccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHhhh-cC
Confidence 998654322 2245689999999999998999999999999999999999999973211 11111111 11
Q ss_pred cccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 043720 1049 QVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQI 1098 (1103)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1098 (1103)
......+..++..+.+++.+||+.||++|||++|++++|++|
T Consensus 230 --------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 --------KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp --------CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred --------CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 112223455678899999999999999999999999999875
No 96
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=359.68 Aligned_cols=249 Identities=24% Similarity=0.337 Sum_probs=203.6
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l 895 (1103)
.++|++.+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999765 589999999976532 33456788999999988 69999999999999999999
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+++|+|.++++... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999998764 399999999999999999999999 999999999999999999999999999975422
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
........+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 177 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~------- 240 (353)
T 3txo_A 177 -NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAILNDE------- 240 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-------
T ss_pred -CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC-------
Confidence 2233445689999999999999999999999999999999999999997321 112222222111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCH------HHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTM------KQVVQ 1093 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 1093 (1103)
...+...+..+.+++.+|++.||++||++ .|+++
T Consensus 241 ----~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 241 ----VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ----CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 12334456779999999999999999998 77765
No 97
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-37 Score=351.71 Aligned_cols=272 Identities=24% Similarity=0.366 Sum_probs=207.2
Q ss_pred HHHhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcC--CCCceeEEEeEEecC----
Q 043720 817 IRATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV--RHPNLVTLIGYRASG---- 890 (1103)
Q Consensus 817 ~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~---- 890 (1103)
....++|++.+.||+|+||+||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 344568999999999999999999876 8999999986432 23444555555554 899999999999877
Q ss_pred CeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC-----CCCcccCCCCCCcEEECCCCCEEEe
Q 043720 891 NEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQC-----APRVLHRDVKPSNILLDDDFNAYLS 965 (1103)
Q Consensus 891 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~ki~ 965 (1103)
...++||||+++|+|.++++.. .+++..++.++.|++.||+|||+++ .++|+||||||+||+++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 7899999999999999999764 3899999999999999999999752 3489999999999999999999999
Q ss_pred ecccccccCCCCCc---cccCCcccccccCccccccCCCCCc------chhHHHHHHHHHHHhCC----------CCCCC
Q 043720 966 DFGLSRLLGTSETH---ATTGVAGTFGYVAPEYALTCRVSDK------ADVYSYGVVLLELISDK----------KALDP 1026 (1103)
Q Consensus 966 Dfgla~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~------sDvwslGvil~elltg~----------~p~~~ 1026 (1103)
|||+++........ ......||+.|+|||++.+..++.+ +|||||||++|||++|. .||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 99999776433322 1234579999999999987776665 99999999999999994 44432
Q ss_pred CCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCCC
Q 043720 1027 SFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSPN 1103 (1103)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 1103 (1103)
..... ..................+.... ....++..+.+++.+||+.||++||+++||+++|+++.++.+
T Consensus 265 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 265 LVPSD----PSYEDMREIVCIKKLRPSFPNRW---SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp TSCSS----CCHHHHHHHHTTSCCCCCCCGGG---GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred hcCCC----CchhhhHHHHhhhccCccccccc---hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 22111 11111222221121111111111 123678889999999999999999999999999999987753
No 98
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.1e-38 Score=357.31 Aligned_cols=263 Identities=21% Similarity=0.360 Sum_probs=199.0
Q ss_pred HhcCCCCcceeccCCcccEEEEEEcCCc----EEEEEEccccc-chhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEISPGI----LVAVKKLAVGR-FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM 893 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~----~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 893 (1103)
..++|++.+.||+|+||+||+|...... .||||++.... .....+.+.+|+.++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 3467999999999999999999765432 79999997653 234567899999999999999999999999877655
Q ss_pred ------EEEEeecCCCChHHHHHhhcC----CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEE
Q 043720 894 ------FLIYNYLPGGNLENFIKARTS----RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAY 963 (1103)
Q Consensus 894 ------~lV~E~~~~gsL~~~l~~~~~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 963 (1103)
++||||+++|+|.+++..... ..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 999999999999999976432 2489999999999999999999999 999999999999999999999
Q ss_pred EeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHH
Q 043720 964 LSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWA 1041 (1103)
Q Consensus 964 i~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1041 (1103)
|+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... . ...
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~---~~~ 249 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----A---EIY 249 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----G---GHH
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----H---HHH
Confidence 9999999876443322 2234456789999999999999999999999999999999 8888873321 1 111
Q ss_pred HHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1042 SMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
...... .....+...+..+.+++.+||+.||++|||+.|+++.|+++...|
T Consensus 250 ~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 250 NYLIGG----------NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHTT----------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHhcC----------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111111 112234456678999999999999999999999999999987654
No 99
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-37 Score=366.58 Aligned_cols=174 Identities=20% Similarity=0.178 Sum_probs=112.0
Q ss_pred cccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCC
Q 043720 97 GKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLR 176 (1103)
Q Consensus 97 g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 176 (1103)
+..+..++++++|++|+|++|.+++ +| .++.+++|++|+|++|.+++ +| ++.+++|++|+|++|++++ +| ++
T Consensus 32 ~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~ 103 (457)
T 3bz5_A 32 ATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VT 103 (457)
T ss_dssp TTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CT
T ss_pred cccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cC
Confidence 3344566777777777777777775 34 57777777777777777775 33 6777777777777777774 33 66
Q ss_pred CCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCE
Q 043720 177 NFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRT 256 (1103)
Q Consensus 177 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 256 (1103)
++++|++|++++|++++ +| ++.+++|++|++++|++++ ++ +.. +++|++|++++|+..+.+ .++.+++|++
T Consensus 104 ~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~-l~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 174 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSH-NTQLTELDCHLNKKITKL--DVTPQTQLTT 174 (457)
T ss_dssp TCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTT-CTTCCEEECTTCSCCCCC--CCTTCTTCCE
T ss_pred CCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--ccc-CCcCCEEECCCCCccccc--ccccCCcCCE
Confidence 77777777777777775 33 6667777777777777763 33 222 355666666666544444 3555666666
Q ss_pred EeCCCccCCccccccccCCCCCCEEEccCCcCCC
Q 043720 257 LLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNG 290 (1103)
Q Consensus 257 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 290 (1103)
|++++|++++ +| ++.+++|+.|++++|++++
T Consensus 175 L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~ 205 (457)
T 3bz5_A 175 LDCSFNKITE-LD--VSQNKLLNRLNCDTNNITK 205 (457)
T ss_dssp EECCSSCCCC-CC--CTTCTTCCEEECCSSCCSC
T ss_pred EECCCCccce-ec--cccCCCCCEEECcCCcCCe
Confidence 6666666655 23 5555666666666666554
No 100
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.8e-38 Score=359.38 Aligned_cols=260 Identities=24% Similarity=0.425 Sum_probs=215.8
Q ss_pred hcCCCCcceeccCCcccEEEEEEc--------CCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecC
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS--------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASG 890 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 890 (1103)
.++|++.+.||+|+||+||+|... ++..||||++.........+.+.+|+.+++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467999999999999999999763 46789999998776666678899999999999 899999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhhcC--------------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE
Q 043720 891 NEMFLIYNYLPGGNLENFIKARTS--------------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL 956 (1103)
Q Consensus 891 ~~~~lV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll 956 (1103)
+..++||||+++|+|.++++.... ..+++.+++.++.|++.||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 999999999999999999986542 3488999999999999999999999 99999999999999
Q ss_pred CCCCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCC
Q 043720 957 DDDFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDG 1034 (1103)
Q Consensus 957 ~~~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~ 1034 (1103)
+.++.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~------ 264 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 264 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC------
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC------
Confidence 99999999999999876543322 2334457889999999998889999999999999999999 998886321
Q ss_pred cchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1035 FNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
......... .. .....+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 265 --~~~~~~~~~-~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 265 --VEELFKLLK-EG---------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp --HHHHHHHHH-HT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHh-cC---------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111111111 11 1122344566789999999999999999999999999999853
No 101
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-38 Score=356.93 Aligned_cols=260 Identities=24% Similarity=0.435 Sum_probs=208.3
Q ss_pred cCCCCcceeccCCcccEEEEEEcC-----CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISP-----GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
.+|+..+.||+|+||+||+|.... +..||||++...........+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 457778999999999999997653 246999999876656567789999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+++|+|.++++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999998643 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCc--cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccc
Q 043720 976 SETH--ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKD 1052 (1103)
Q Consensus 976 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1103)
.... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ........ .
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~~~-~----- 265 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKAIN-D----- 265 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHH-T-----
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHH-C-----
Confidence 3221 2223346789999999998899999999999999999999 9999863211 11111111 1
Q ss_pred cccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1053 VFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
......+..++..+.+++.+||+.||++||+++|+++.|+++.+.+
T Consensus 266 ----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 266 ----GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp ----TCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred ----CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 1112234456788999999999999999999999999999986554
No 102
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.8e-38 Score=359.08 Aligned_cols=252 Identities=23% Similarity=0.383 Sum_probs=202.1
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC-------
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN------- 891 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 891 (1103)
.++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356899999999999999999876 789999999987666666788999999999999999999999885543
Q ss_pred --------------------------------------------------eEEEEEeecCCCChHHHHHhhcC-CcccHH
Q 043720 892 --------------------------------------------------EMFLIYNYLPGGNLENFIKARTS-RAVDWK 920 (1103)
Q Consensus 892 --------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~-~~l~~~ 920 (1103)
..++||||+++++|.++++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 38999999999999999987543 335666
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC-----------ccccCCccccc
Q 043720 921 ILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET-----------HATTGVAGTFG 989 (1103)
Q Consensus 921 ~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~-----------~~~~~~~g~~~ 989 (1103)
.++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 7899999999999999999 999999999999999999999999999987754321 22344579999
Q ss_pred ccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHH
Q 043720 990 YVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLED 1069 (1103)
Q Consensus 990 y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1103)
|+|||++.+..++.++||||||+++|||++|..|+.. ..... ........ ..........
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~----------~~~~~-~~~~~~~~---------~~~~~~~~~~ 301 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME----------RVRII-TDVRNLKF---------PLLFTQKYPQ 301 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH----------HHHHH-HHHHTTCC---------CHHHHHHCHH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH----------HHHHH-HHhhccCC---------CcccccCChh
Confidence 9999999999999999999999999999998765320 00011 11111100 0012334567
Q ss_pred HHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1070 MLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1070 l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
+.+++.+||+.||++||+++|++++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCCCCcCCCHHHHhhc
Confidence 7999999999999999999999874
No 103
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=349.56 Aligned_cols=246 Identities=26% Similarity=0.389 Sum_probs=207.9
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +|+.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56899999999999999999765 689999999976532 234577889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++|+|.++++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp CCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 9999999999998754 489999999999999999999999 999999999999999999999999999986532
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~--------- 219 (318)
T 1fot_A 159 --VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKILNAE--------- 219 (318)
T ss_dssp --CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHCC---------
T ss_pred --ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC---------
Confidence 2335679999999999999999999999999999999999999997321 112222222111
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRP-----TMKQVVQC 1094 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 1094 (1103)
...+...+.++.+++.+|++.||++|| +++|++++
T Consensus 220 --~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 220 --LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 122344567899999999999999999 88888854
No 104
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1.8e-38 Score=358.12 Aligned_cols=271 Identities=23% Similarity=0.370 Sum_probs=220.9
Q ss_pred CCCHHHHHHHhcCCCCcceeccCCcccEEEEEE------cCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeE
Q 043720 810 PLTYESIIRATGDFNTSNCIGSGGFGTTYKAEI------SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVT 882 (1103)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 882 (1103)
+....+.....++|++.+.||+|+||+||+|.. .+++.||||++.........+.+.+|+.+++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 445555556678899999999999999999964 346889999998776666677899999999999 7999999
Q ss_pred EEeEEecCC-eEEEEEeecCCCChHHHHHhhcCC--------------cccHHHHHHHHHHHHHHHHHHHhCCCCCcccC
Q 043720 883 LIGYRASGN-EMFLIYNYLPGGNLENFIKARTSR--------------AVDWKILHKIALDVASALAYLHDQCAPRVLHR 947 (1103)
Q Consensus 883 l~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~--------------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~ 947 (1103)
+++++...+ ..++||||+++|+|.+++...... .+++..+..++.|++.||+|||++ +|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 999987654 589999999999999999875432 288999999999999999999999 99999
Q ss_pred CCCCCcEEECCCCCEEEeecccccccCCCCC-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 043720 948 DVKPSNILLDDDFNAYLSDFGLSRLLGTSET-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALD 1025 (1103)
Q Consensus 948 Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~ 1025 (1103)
||||+||+++.++.+||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999987644332 22334567889999999999999999999999999999998 999886
Q ss_pred CCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1026 PSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.... . .... .....+. ....+...+..+.+++.+||+.||++||+++|++++|+++.+
T Consensus 253 ~~~~----~---~~~~-~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 253 GVKI----D---EEFC-RRLKEGT---------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp TCCC----S---HHHH-HHHHHTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccch----h---HHHH-HHhccCc---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 3221 1 1111 1111111 112234456789999999999999999999999999999864
No 105
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.8e-38 Score=355.61 Aligned_cols=248 Identities=24% Similarity=0.377 Sum_probs=206.4
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|.+.+.||+|+||+||+|.. .+++.||||++..... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999976 5689999999875432 22346788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+ +|+|.+++.... .+++.++..++.|++.|++|||++ +|+||||||+||++++++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 789999987654 399999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||....... ....+.
T Consensus 162 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------------------~~~~i~ 221 (336)
T 3h4j_B 162 --NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN------------------LFKKVN 221 (336)
T ss_dssp --BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT------------------CBCCCC
T ss_pred --cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH------------------HHHHHH
Confidence 22345579999999999988776 679999999999999999999997433211 000011
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.. ....+...+..+.+++.+||+.||++|||++|++++
T Consensus 222 ~~-~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 222 SC-VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SS-CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred cC-CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 11 112344566789999999999999999999999865
No 106
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.4e-38 Score=360.34 Aligned_cols=259 Identities=22% Similarity=0.389 Sum_probs=207.9
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcE----EEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGIL----VAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
++|++.+.||+|+||+||+|.+. +++. ||+|++.........+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46889999999999999999765 3443 78888765544444566788999999999999999999986 456899
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+.+|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 92 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999998653 3589999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 976 SETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 976 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
.... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... . ..... ...
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~---~~~~~-~~~------ 232 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----A---EVPDL-LEK------ 232 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----T---HHHHH-HHT------
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----H---HHHHH-HHc------
Confidence 4332 2344567889999999999999999999999999999999 9999874321 1 11111 111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
......+..++..+.+++.+||+.||++||+++|++++|+++.+.|
T Consensus 233 ---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 233 ---GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp ---TCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred ---CCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 1112223345567899999999999999999999999999987653
No 107
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=9.9e-39 Score=360.34 Aligned_cols=269 Identities=23% Similarity=0.380 Sum_probs=214.5
Q ss_pred CCCcceeccCCcccEEEEEEc-----CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEec--CCeEEE
Q 043720 823 FNTSNCIGSGGFGTTYKAEIS-----PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS--GNEMFL 895 (1103)
Q Consensus 823 ~~~~~~lg~G~fg~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l 895 (1103)
|++.+.||+|+||+||++.+. +++.||||++.........+.+.+|+.++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999988653 5889999999877666667889999999999999999999999987 467899
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+++|+|.++++... +++.+++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 113 v~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999997653 89999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCc--cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 976 SETH--ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 976 ~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
.... ......+++.|+|||++.+..++.++||||||+++|||++|+.||....... .....+...........+.
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF---LELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH---HHHHCSCCHHHHHHHHHHH
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh---hhhhcccccchhHHHHHHH
Confidence 3321 2334567889999999998889999999999999999999999986321100 0000000000000111122
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
+........+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 22233334456677889999999999999999999999999998853
No 108
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.9e-38 Score=358.88 Aligned_cols=266 Identities=20% Similarity=0.351 Sum_probs=218.5
Q ss_pred HHHHHHhcCCCCcceeccCCcccEEEEEEc------CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEE
Q 043720 814 ESIIRATGDFNTSNCIGSGGFGTTYKAEIS------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYR 887 (1103)
Q Consensus 814 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 887 (1103)
++.....++|++.+.||+|+||+||+|... +++.||||++...........+.+|+.++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 334445678999999999999999999654 36889999998766666677899999999999999999999999
Q ss_pred ecCCeEEEEEeecCCCChHHHHHhhcC--------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC
Q 043720 888 ASGNEMFLIYNYLPGGNLENFIKARTS--------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD 959 (1103)
Q Consensus 888 ~~~~~~~lV~E~~~~gsL~~~l~~~~~--------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~ 959 (1103)
.+.+..++||||+++|+|.++++.... ..+++..+++++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCC
Confidence 999999999999999999999976432 3468899999999999999999999 99999999999999999
Q ss_pred CCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcch
Q 043720 960 FNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNI 1037 (1103)
Q Consensus 960 ~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~ 1037 (1103)
+.+||+|||+++........ ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~ 246 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--------N 246 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--------H
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC--------H
Confidence 99999999999865433222 2234457889999999998899999999999999999999 788876321 1
Q ss_pred HHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1038 ISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
........ .+. ....+..++..+.+++.+||+.||++||++.|++++|+++..
T Consensus 247 ~~~~~~~~-~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 247 EQVLRFVM-EGG---------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHHHH-TTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHH-cCC---------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11222111 111 112344566789999999999999999999999999998753
No 109
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-38 Score=372.57 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=212.0
Q ss_pred HHHHHHhcCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecC
Q 043720 814 ESIIRATGDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG 890 (1103)
Q Consensus 814 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 890 (1103)
.++....++|++.+.||+|+||+||+|+... ++.||||++..... ....+.+.+|+.++..++||||+++++++.+.
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 3444456889999999999999999998764 78999999975432 12234488999999999999999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccc
Q 043720 891 NEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLS 970 (1103)
Q Consensus 891 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla 970 (1103)
+..|+||||+++|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999998742 3499999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCccccCCcccccccCccccc-----cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHH
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYAL-----TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLL 1045 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1103)
+.............+||+.|+|||++. ...++.++|||||||++|||++|+.||.... .......+.
T Consensus 223 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~--------~~~~~~~i~ 294 (437)
T 4aw2_A 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETYGKIM 294 (437)
T ss_dssp EECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHH
T ss_pred hhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC--------hhHHHHhhh
Confidence 876554444455678999999999987 5678999999999999999999999997321 111111111
Q ss_pred hcCcccccccccccCCCChhHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 043720 1046 RQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLST--RPTMKQVVQC 1094 (1103)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 1094 (1103)
..... . .........+..+.++|.+|+..+|++ ||+++|++++
T Consensus 295 ~~~~~--~----~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 295 NHKER--F----QFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp THHHH--C----CCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred hcccc--c----cCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 11000 0 001111235678999999999888888 9999999864
No 110
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=7.1e-39 Score=371.46 Aligned_cols=259 Identities=22% Similarity=0.310 Sum_probs=210.8
Q ss_pred HHHHHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC
Q 043720 815 SIIRATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN 891 (1103)
Q Consensus 815 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 891 (1103)
++....++|++.+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999776 488999999875322 122345789999999999999999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 892 EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 892 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
..|+||||+++|+|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 999999999999999999764 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccccCCcccccccCccccccCC----CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc
Q 043720 972 LLGTSETHATTGVAGTFGYVAPEYALTCR----VSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ 1047 (1103)
Q Consensus 972 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1103)
.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... .......+...
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~i~~~ 288 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSKIMNH 288 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTH
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC--------hhhHHHHHHhc
Confidence 77544433445678999999999997655 7889999999999999999999997321 11112221111
Q ss_pred CcccccccccccCCCChhHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 043720 1048 GQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLST--RPTMKQVVQC 1094 (1103)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 1094 (1103)
.. ....+.....+..+.++|.+|+..+|++ ||+++||+++
T Consensus 289 ~~-------~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 289 KN-------SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HH-------HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cc-------cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 10 0111112245678999999999999998 9999999875
No 111
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.3e-38 Score=352.34 Aligned_cols=257 Identities=25% Similarity=0.422 Sum_probs=214.2
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
.++|++.+.||+|+||+||+|...++..||||++..... ..+.+.+|+.++++++||||+++++++.. +..++||||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 88 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEY 88 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc--cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEec
Confidence 357889999999999999999988888999999875432 35778999999999999999999999874 468999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++++|.++++...+..+++.++..++.|++.||+|||++ +|+||||||+||++++++.+||+|||++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 9999999999765444589999999999999999999999 9999999999999999999999999999877544433
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ......... .+ .
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~-~~---------~ 227 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------NPEVIQNLE-RG---------Y 227 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHHHH-TT---------C
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC--------HHHHHHHHh-cc---------c
Confidence 4445567889999999998889999999999999999999 888886321 111111111 11 1
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
....+...+..+.+++.+|++.||++||+++++++.|+++..
T Consensus 228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 122344566789999999999999999999999999998753
No 112
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=356.49 Aligned_cols=259 Identities=25% Similarity=0.432 Sum_probs=206.5
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcE----EEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGIL----VAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
++|++.+.||+|+||+||+|.+. +++. ||+|.+.........+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 57999999999999999999754 3443 57777766555556788999999999999999999999998765 789
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
|+||+.+|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999998754 3589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 976 SET-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 976 ~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .. ... .
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~---~~~-~--------- 231 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SE---ISS-I--------- 231 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GG---HHH-H---------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HH---HHH-H---------
Confidence 322 22334456889999999999999999999999999999999 9999874321 11 111 1
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
+........+..++..+.+++.+||+.||++||+++|+++.|+++.+.|
T Consensus 232 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 232 LEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 1111122334556778999999999999999999999999999987654
No 113
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=357.03 Aligned_cols=250 Identities=24% Similarity=0.375 Sum_probs=206.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46999999999999999999765 488999999875432 334678899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+.+|+|.++++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp CCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 9999999999998653 499999999999999999999999 9999999999999999999999999999876432
Q ss_pred CccccCCcccccccCcccccc---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 978 THATTGVAGTFGYVAPEYALT---CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||...... ........... .
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~~~~~~~-~------ 235 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST-----SSKEIVHTFET-T------ 235 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS-----CHHHHHHHHHH-C------
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhh-c------
Confidence 33455689999999999864 45889999999999999999999999743221 11111111111 1
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPT-MKQVVQ 1093 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 1093 (1103)
....+...+..+.+++.+||+.||++||+ ++++.+
T Consensus 236 ----~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 ----VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ----ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 12234456678999999999999999998 666654
No 114
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.3e-37 Score=345.87 Aligned_cols=253 Identities=26% Similarity=0.497 Sum_probs=206.7
Q ss_pred cCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhh------HHHHHHHHHHHhcCCCCceeEEEeEEecCCeE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHG------VQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 893 (1103)
++|++.+.||+|+||+||+|.. .+++.||||++........ .+.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5799999999999999999976 4689999999876543221 267899999999999999999999997765
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCC--cccCCCCCCcEEECCCCC-----EEEee
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPR--VLHRDVKPSNILLDDDFN-----AYLSD 966 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivH~Dlk~~NIll~~~~~-----~ki~D 966 (1103)
++||||+++|+|.+++.... ..+++..+..++.|++.|++|||++ + |+||||||+||+++.++. +||+|
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 69999999999999987643 4589999999999999999999999 8 999999999999988776 99999
Q ss_pred cccccccCCCCCccccCCcccccccCcccc--ccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHH
Q 043720 967 FGLSRLLGTSETHATTGVAGTFGYVAPEYA--LTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASML 1044 (1103)
Q Consensus 967 fgla~~~~~~~~~~~~~~~g~~~y~aPE~~--~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1103)
||+++.... ......|++.|+|||++ ....++.++||||+|+++|||++|+.||..... ....+....
T Consensus 173 fg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~~~~ 242 (287)
T 4f0f_A 173 FGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY------GKIKFINMI 242 (287)
T ss_dssp CTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC------CHHHHHHHH
T ss_pred CCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc------cHHHHHHHH
Confidence 999975432 33456789999999998 455678899999999999999999999974321 111111111
Q ss_pred HhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 043720 1045 LRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQI 1098 (1103)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 1098 (1103)
... ......+..++..+.+++.+||+.||++||+++|+++.|+++
T Consensus 243 ~~~---------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 REE---------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHS---------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hcc---------CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 111 112233456678899999999999999999999999999875
No 115
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=383.66 Aligned_cols=258 Identities=26% Similarity=0.425 Sum_probs=216.0
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
.++|++.+.||+|+||+||+|.+..+..||||+++.... ..+.|.+|+.++++++||||+++++++.+ +..|+||||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 456888999999999999999999888999999976543 34679999999999999999999999876 678999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++|+|.++++......+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++........
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 419 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 419 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee
Confidence 9999999999875555689999999999999999999999 9999999999999999999999999999876433222
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
......++..|+|||++....++.++|||||||++|||++ |+.||.... ........ .. ..
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--------~~~~~~~i-~~---------~~ 481 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQV-ER---------GY 481 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--------HHHHHHHH-HT---------TC
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHH-Hc---------CC
Confidence 3344567889999999998899999999999999999999 888886321 11111111 11 11
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
....+..++..+.++|.+||+.||++||++++|++.|+++..+
T Consensus 482 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 482 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 2233456778899999999999999999999999999998543
No 116
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.7e-37 Score=362.78 Aligned_cols=255 Identities=17% Similarity=0.121 Sum_probs=214.7
Q ss_pred CCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCC
Q 043720 116 FNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVI 195 (1103)
Q Consensus 116 ~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 195 (1103)
.....+..+..++++++|++|||++|.+++ +| .++.+++|++|+|++|++++ +| ++++++|++|++++|++++.
T Consensus 27 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~- 100 (457)
T 3bz5_A 27 AFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL- 100 (457)
T ss_dssp HTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-
T ss_pred hcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-
Confidence 345566677789999999999999999996 46 79999999999999999996 45 89999999999999999975
Q ss_pred ChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCC
Q 043720 196 PGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWL 275 (1103)
Q Consensus 196 p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 275 (1103)
+ ++++++|++|++++|++++ +| +. .+++|++|++++|++++. + ++.+++|++|++++|...+.+ .+..+
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~-l~--~~-~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l 169 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTK-LD--VS-QNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQ 169 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSC-CC--CT-TCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTC
T ss_pred e--cCCCCcCCEEECCCCcCCe-ec--CC-CCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccC
Confidence 4 8999999999999999995 66 44 458899999999999974 3 889999999999999766655 48899
Q ss_pred CCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhccccccc
Q 043720 276 RKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRI 355 (1103)
Q Consensus 276 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~ 355 (1103)
++|+.|++++|++++ +| ++.+++|+.|++++| .+.+. .++.+++|+.
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N---------------------------~l~~~---~l~~l~~L~~ 216 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTN---------------------------NITKL---DLNQNIQLTF 216 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSS---------------------------CCSCC---CCTTCTTCSE
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCC---------------------------cCCee---ccccCCCCCE
Confidence 999999999999997 45 899999999999863 33332 3778899999
Q ss_pred cccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccccccceeEEEecCCccc
Q 043720 356 IWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMS 435 (1103)
Q Consensus 356 L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~ 435 (1103)
|++++|++.+ +| ++.+++|+.|+|++|++++.+ +..+++|+.|++++|+++ .|++++|++.
T Consensus 217 L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~L~-------------~L~l~~n~~~ 277 (457)
T 3bz5_A 217 LDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTDLL-------------EIDLTHNTQL 277 (457)
T ss_dssp EECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCCCS-------------CCCCTTCTTC
T ss_pred EECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCCCC-------------EEECCCCccC
Confidence 9999999998 55 889999999999999999875 456778888998887653 4566666655
Q ss_pred cccC
Q 043720 436 GSIP 439 (1103)
Q Consensus 436 g~ip 439 (1103)
|.+|
T Consensus 278 ~~~~ 281 (457)
T 3bz5_A 278 IYFQ 281 (457)
T ss_dssp CEEE
T ss_pred Cccc
Confidence 5443
No 117
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=363.18 Aligned_cols=255 Identities=22% Similarity=0.270 Sum_probs=207.9
Q ss_pred HhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
..++|++.+.||+|+||+||+|.. .+|+.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 346799999999999999999965 4689999999976543 33456789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC---CCCCEEEeeccccccc
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD---DDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~ki~Dfgla~~~ 973 (1103)
|||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||++...
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999998754 489999999999999999999999 999999999999998 5678999999999876
Q ss_pred CCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 974 GTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 974 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... ........||+.|+|||++.+..++.++||||+||++|+|++|..||.... ........ ..+...
T Consensus 164 ~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--------~~~~~~~i-~~~~~~-- 231 (444)
T 3soa_A 164 EGE-QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--------QHRLYQQI-KAGAYD-- 231 (444)
T ss_dssp CTT-CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHH-HHTCCC--
T ss_pred cCC-CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHH-HhCCCC--
Confidence 432 223345689999999999999999999999999999999999999996321 11111111 111110
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.........+..+.+++.+||+.||++|||++|++++
T Consensus 232 ----~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 ----FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ----CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ----CCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0011123456789999999999999999999999874
No 118
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.9e-37 Score=353.27 Aligned_cols=246 Identities=20% Similarity=0.295 Sum_probs=208.5
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +|+.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 47999999999999999999765 689999999976532 234677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++|+|.++++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999998754 389999999999999999999999 9999999999999999999999999999876432
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+....
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~--------- 254 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVSGK--------- 254 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC---------
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--------HHHHHHHHHcCC---------
Confidence 334678999999999999999999999999999999999999997321 112222222111
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRPT-----MKQVVQC 1094 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++||+ ++||+++
T Consensus 255 --~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 --VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp --CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1233455678999999999999999998 8888754
No 119
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.1e-38 Score=351.96 Aligned_cols=265 Identities=21% Similarity=0.377 Sum_probs=211.8
Q ss_pred cCCCCcceeccCCcccEEEEEE-----cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecC--CeE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-----SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG--NEM 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 893 (1103)
.+|++.+.||+|+||+||+|.+ .+++.||||++.........+.+.+|+.++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3588899999999999999984 358999999998766555678899999999999999999999999876 678
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
++||||+++++|.++++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccc
Confidence 99999999999999997654 3489999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCC--ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-------CCCCCcchHHHHHHH
Q 043720 974 GTSET--HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFS-------SHGDGFNIISWASML 1044 (1103)
Q Consensus 974 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~ 1044 (1103)
..... .......+|..|+|||++.+..++.++||||+|+++|||++|+.|+..... ............
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 253 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV--- 253 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH---
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH---
Confidence 54432 223445678899999999998899999999999999999999988642210 000000000011
Q ss_pred HhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1045 LRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
..+........+..++..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 254 -------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 254 -------NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp -------HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------HHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 111111223345566788999999999999999999999999999875
No 120
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.5e-37 Score=350.49 Aligned_cols=265 Identities=22% Similarity=0.381 Sum_probs=194.0
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457999999999999999999765 5899999999876555455778899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcC----CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccC
Q 043720 899 YLPGGNLENFIKARTS----RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~ 974 (1103)
|++ |+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 699999976532 3589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc---c
Q 043720 975 TSETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ---V 1050 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 1050 (1103)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ............... .
T Consensus 160 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 160 IPV-NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND-----EEQLKLIFDIMGTPNESLW 233 (317)
T ss_dssp SCC-CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCTTTC
T ss_pred CCc-ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhCCCChhHh
Confidence 322 22334578999999999876 4689999999999999999999999973321 111111111100000 0
Q ss_pred ccc-----cccc------------ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 KDV-----FNAE------------LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 ~~~-----~~~~------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... .... .........+..+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000 0000 0001112345679999999999999999999999864
No 121
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-37 Score=345.74 Aligned_cols=263 Identities=23% Similarity=0.353 Sum_probs=202.7
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
++|++.+.||+|+||+||+|...+++.||||++...... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 478899999999999999998888999999999765432 2346788999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV-R 155 (288)
T ss_dssp CSE-EHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc-c
Confidence 975 9999987643 4589999999999999999999999 99999999999999999999999999998764322 2
Q ss_pred cccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc---ccc---
Q 043720 980 ATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ---VKD--- 1052 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--- 1052 (1103)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ............... ...
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSE-----ADQLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHHCCCChhhchhhhc
Confidence 2334568999999999876 4589999999999999999999999973211 111111111100000 000
Q ss_pred --cccccc-------cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1053 --VFNAEL-------WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1053 --~~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..++.. +.......+..+.+++.+||+.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 111123456788999999999999999999999874
No 122
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-38 Score=348.55 Aligned_cols=257 Identities=24% Similarity=0.402 Sum_probs=212.6
Q ss_pred cCCCCcc-eeccCCcccEEEEEEc---CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 821 GDFNTSN-CIGSGGFGTTYKAEIS---PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 821 ~~~~~~~-~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
++|.+.+ .||+|+||+||+|... ++..||||++.........+.+.+|+.++++++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3455665 8999999999999753 57889999998776666778899999999999999999999999 45678999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++++|.+++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 9999999999999754 34589999999999999999999999 9999999999999999999999999999877543
Q ss_pred CCc--cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 977 ETH--ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 977 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ....... ..+
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~~i-~~~----- 229 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PEVMAFI-EQG----- 229 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--------HHHHHHH-HTT-----
T ss_pred cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHH-hcC-----
Confidence 322 2233456889999999988889999999999999999998 9999863321 1111111 111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.....+..++..+.+++.+||+.||++||++.|++++|+++..
T Consensus 230 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 230 ----KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1123345667889999999999999999999999999999854
No 123
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-38 Score=361.41 Aligned_cols=258 Identities=28% Similarity=0.437 Sum_probs=199.6
Q ss_pred CCCCcceeccCCcccEEEEEEcC----CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEec-CCeEEEE
Q 043720 822 DFNTSNCIGSGGFGTTYKAEISP----GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS-GNEMFLI 896 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lV 896 (1103)
.|++.+.||+|+||+||+|...+ +..||||++.........+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 46677899999999999997542 246899998776666677889999999999999999999998754 5678999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++|+|.++++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999997643 4588999999999999999999999 9999999999999999999999999999866433
Q ss_pred CCc---cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCcccc
Q 043720 977 ETH---ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKD 1052 (1103)
Q Consensus 977 ~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1103)
... ......+++.|+|||++.+..++.++||||||+++|||++ |..||..... ..... ... .+
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-----~~~~~---~~~-~~---- 312 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITV---YLL-QG---- 312 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-----SCHHH---HHH-TT----
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-----HHHHH---HHH-cC----
Confidence 221 2234567889999999999999999999999999999999 5555542211 11111 111 11
Q ss_pred cccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1053 VFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
.....+..++..+.+++.+||+.||++||+++|+++.|+++..+
T Consensus 313 -----~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 313 -----RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11123445677899999999999999999999999999998653
No 124
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8e-38 Score=355.16 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=207.2
Q ss_pred HHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeE
Q 043720 818 RATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEM 893 (1103)
Q Consensus 818 ~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 893 (1103)
...++|++.+.||+|+||+||+|+.+ +++.||||+++.... ....+.+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999775 589999999976532 33456788899999876 899999999999999999
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
|+||||+++|+|.++++... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999998754 389999999999999999999999 9999999999999999999999999999754
Q ss_pred CCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 974 GTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 974 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 169 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~----- 234 (345)
T 1xjd_A 169 MLG-DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--------EEELFHSIRMDN----- 234 (345)
T ss_dssp CCT-TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-----
T ss_pred ccC-CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHhCC-----
Confidence 322 223445689999999999999999999999999999999999999997321 111111111111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMK-QVVQ 1093 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 1093 (1103)
...+...+..+.+++.+||+.||++||++. |+++
T Consensus 235 ------~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 235 ------PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ------CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 122344567899999999999999999997 6653
No 125
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.3e-38 Score=348.40 Aligned_cols=251 Identities=25% Similarity=0.421 Sum_probs=208.8
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEec---------
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS--------- 889 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 889 (1103)
.++|++.+.||+|+||.||+|... +++.||||++.... +.+.+|+.++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 356999999999999999999776 68999999987543 346789999999999999999998754
Q ss_pred -------CCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCE
Q 043720 890 -------GNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNA 962 (1103)
Q Consensus 890 -------~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 962 (1103)
....++||||+++++|.++++......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCE
Confidence 44689999999999999999876666799999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHH
Q 043720 963 YLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWAS 1042 (1103)
Q Consensus 963 ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1042 (1103)
||+|||++....... ......|++.|+|||.+.+..++.++||||||+++|||++|..|+... ..+..
T Consensus 162 kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----------~~~~~ 229 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET----------SKFFT 229 (284)
T ss_dssp EECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH----------HHHHH
T ss_pred EECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH----------HHHHH
Confidence 999999998764332 233456899999999999999999999999999999999999876410 11111
Q ss_pred HHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCCC
Q 043720 1043 MLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSPN 1103 (1103)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~ 1103 (1103)
. .... ..+...+..+.+++.+||+.||++||++.|++++|+.++++++
T Consensus 230 ~-~~~~------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 230 D-LRDG------------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp H-HHTT------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred H-hhcc------------cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 1 1111 1123345678999999999999999999999999999988764
No 126
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=352.41 Aligned_cols=252 Identities=23% Similarity=0.325 Sum_probs=207.1
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch-----hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-----HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 46889999999999999999765 5899999999765432 13678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC----CEEEeecccc
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF----NAYLSDFGLS 970 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~ki~Dfgla 970 (1103)
+||||+++++|.+++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||++
T Consensus 91 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 999999999999999764 3489999999999999999999999 999999999999999887 7999999999
Q ss_pred cccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 166 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~~~~~~-~ 234 (326)
T 2y0a_A 166 HKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANVSAVN-Y 234 (326)
T ss_dssp EECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHHTC-C
T ss_pred eECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--------HHHHHHHHhcC-C
Confidence 8764322 23345789999999999999999999999999999999999999963211 11111111111 0
Q ss_pred cccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 KDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.+.... ....+..+.+++.+||+.||++|||++|++++
T Consensus 235 --~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 235 --EFEDEY----FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp --CCCHHH----HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred --CcCccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 001111 12345678999999999999999999999974
No 127
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.6e-37 Score=352.10 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=208.2
Q ss_pred HhcCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccc--hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRF--QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 894 (1103)
..++|++.+.||+|+||+||+|+... ++.||||++..... ....+.+.+|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 34689999999999999999997764 78999999976532 23467788999999988 7999999999999999999
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccC
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~ 974 (1103)
+||||+++|+|.++++... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999998754 389999999999999999999999 99999999999999999999999999998542
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
.. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+....
T Consensus 173 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~------ 237 (353)
T 2i0e_A 173 WD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHN------ 237 (353)
T ss_dssp CT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC------
T ss_pred cC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCC------
Confidence 22 223445689999999999999999999999999999999999999997321 112222222111
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPT-----MKQVVQC 1094 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++||+ ++|++++
T Consensus 238 -----~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 238 -----VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -----CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1234456678999999999999999995 5777654
No 128
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.8e-37 Score=355.75 Aligned_cols=253 Identities=22% Similarity=0.328 Sum_probs=208.0
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999765 589999999976543 335677899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC---CEEEeecccccccC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF---NAYLSDFGLSRLLG 974 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~Dfgla~~~~ 974 (1103)
||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||++....
T Consensus 108 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp CCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 9999999999997643 489999999999999999999999 999999999999998654 59999999998764
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ......... .+... +
T Consensus 183 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--------~~~~~~~i~-~~~~~--~ 249 (362)
T 2bdw_A 183 DS--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYAQIK-AGAYD--Y 249 (362)
T ss_dssp TC--CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HTCCC--C
T ss_pred CC--cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-hCCCC--C
Confidence 32 22345679999999999999999999999999999999999999997321 111122111 11110 0
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.. ......+..+.+++.+||+.||++||++.|++++
T Consensus 250 ~~----~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PS----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CT----TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred Cc----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 1113456789999999999999999999999865
No 129
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.6e-38 Score=351.55 Aligned_cols=251 Identities=23% Similarity=0.344 Sum_probs=199.1
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch-------------------------hhHHHHHHHHHHHh
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-------------------------HGVQQFHAEIKTLG 873 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~ 873 (1103)
.++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 357999999999999999999764 5889999998754321 12356889999999
Q ss_pred cCCCCceeEEEeEEec--CCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCC
Q 043720 874 NVRHPNLVTLIGYRAS--GNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKP 951 (1103)
Q Consensus 874 ~l~h~niv~l~~~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~ 951 (1103)
+++||||+++++++.+ .+..|+||||+++++|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 9999999999999986 5689999999999999887543 3589999999999999999999999 999999999
Q ss_pred CcEEECCCCCEEEeecccccccCCCCCccccCCcccccccCccccccCC---CCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 043720 952 SNILLDDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCR---VSDKADVYSYGVVLLELISDKKALDPSF 1028 (1103)
Q Consensus 952 ~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~sDvwslGvil~elltg~~p~~~~~ 1028 (1103)
+||+++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||....
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSD-ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSS-CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHEEECCCCCEEEecCCCcccccccc-ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999998764332 2234567999999999997655 3678999999999999999999997321
Q ss_pred CCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1029 SSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...... .. ...+.....+..+.+++.+||+.||++||+++|++++
T Consensus 245 --------~~~~~~~~~~-~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 --------IMCLHSKIKS-QA--------LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp --------HHHHHHHHHH-CC--------CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred --------HHHHHHHHhc-cc--------CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1112221111 11 1111123456789999999999999999999999864
No 130
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.3e-37 Score=351.17 Aligned_cols=259 Identities=18% Similarity=0.235 Sum_probs=209.2
Q ss_pred cCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
++|++.+.||+|+||+||+|.. .+++.||||++...... +.+.+|+.+++++ +||||+++++++..++..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA---PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS---CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch---HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 5799999999999999999975 56899999998755332 4578899999999 89999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC-----EEEeeccccccc
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN-----AYLSDFGLSRLL 973 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~ki~Dfgla~~~ 973 (1103)
|+ +++|.++++.. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.+
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999865 34599999999999999999999999 9999999999999998887 999999999876
Q ss_pred CCCCCc------cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc
Q 043720 974 GTSETH------ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ 1047 (1103)
Q Consensus 974 ~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1103)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~-----~~~~~~~~~i~~~ 235 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-----DTLKERYQKIGDT 235 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-----SSHHHHHHHHHHH
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc-----ccHHHHHHHHHhh
Confidence 443321 12456799999999999999999999999999999999999999974321 1111111111110
Q ss_pred CcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1048 GQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
.. ...... .....+ .+.+++.+||+.||++||++++|.+.|+++.
T Consensus 236 ~~---~~~~~~---~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 236 KR---ATPIEV---LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HH---HSCHHH---HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred hc---cCCHHH---HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 00 000000 011234 8999999999999999999999999998874
No 131
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.2e-37 Score=357.30 Aligned_cols=253 Identities=25% Similarity=0.293 Sum_probs=197.5
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|... +++.||||++...... .+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 467999999999999999999776 6899999999764432 3568899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC--EEEeecccccccCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN--AYLSDFGLSRLLGTS 976 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~ki~Dfgla~~~~~~ 976 (1103)
|+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~- 170 (361)
T 3uc3_A 97 YASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL- 170 (361)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred eCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccc-
Confidence 999999999997654 389999999999999999999999 9999999999999987765 99999999974322
Q ss_pred CCccccCCcccccccCccccccCCCCCc-chhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDK-ADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~-sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
........||+.|+|||++.+..++.+ +||||+||++|||++|+.||...... .............
T Consensus 171 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~----~~~~~~~~~~~~~-------- 237 (361)
T 3uc3_A 171 -HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP----RDYRKTIQRILSV-------- 237 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C----CCHHHHHHHHHTT--------
T ss_pred -cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH----HHHHHHHHHHhcC--------
Confidence 222344578999999999988887665 89999999999999999999743221 1122222221111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....+.....+..+.+++.+||+.||++|||+.|++++
T Consensus 238 -~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 238 -KYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -CCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -CCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 11111222345778999999999999999999999976
No 132
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=366.31 Aligned_cols=262 Identities=20% Similarity=0.230 Sum_probs=209.9
Q ss_pred HHHHHHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecC
Q 043720 814 ESIIRATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG 890 (1103)
Q Consensus 814 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 890 (1103)
.+.....++|++.+.||+|+||+||+|+.+ +++.||||++..... ....+.+.+|..++..++||||+++++++.+.
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 344445678999999999999999999775 689999999975432 22345588999999999999999999999999
Q ss_pred CeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccc
Q 043720 891 NEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLS 970 (1103)
Q Consensus 891 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla 970 (1103)
+..|+||||+++|+|.+++++.. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 134 ~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 134 NYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999998653 3589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCccccCCcccccccCccccc-------cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYAL-------TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
+.............+||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......
T Consensus 210 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--------~~~~~~ 281 (412)
T 2vd5_A 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST--------AETYGK 281 (412)
T ss_dssp EECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHH
T ss_pred eeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 877544443445568999999999987 45789999999999999999999999973211 111111
Q ss_pred HHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCC---CCHHHHHHH
Q 043720 1044 LLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTR---PTMKQVVQC 1094 (1103)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 1094 (1103)
+...... ..........+.++.++|.+|+. +|++| |+++|++++
T Consensus 282 i~~~~~~------~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 282 IVHYKEH------LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHTHHHH------CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred HHhcccC------cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 1111000 00011123456789999999999 99998 689998764
No 133
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-38 Score=352.06 Aligned_cols=252 Identities=20% Similarity=0.258 Sum_probs=207.6
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|... +++.||+|++.... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 467999999999999999999765 58899999987543 345678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC--CCCEEEeecccccccCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD--DFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~ki~Dfgla~~~~~~ 976 (1103)
|+++|+|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++......
T Consensus 82 ~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~ 157 (321)
T 1tki_A 82 FISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG 157 (321)
T ss_dssp CCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred eCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence 999999999997543 3589999999999999999999999 9999999999999987 789999999999876433
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
. ......|++.|+|||++.+..++.++||||+|+++|||++|..||.... .............. ++.
T Consensus 158 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~---~~~ 224 (321)
T 1tki_A 158 D--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--------NQQIIENIMNAEYT---FDE 224 (321)
T ss_dssp C--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCC---CCH
T ss_pred C--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHcCCCC---CCh
Confidence 2 2334578999999999999889999999999999999999999997321 11222222211110 011
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.. ....+.++.+++.+|++.||++|||+.|++++
T Consensus 225 ~~----~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 225 EA----FKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HH----HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hh----hccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11 12345778999999999999999999999975
No 134
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.3e-37 Score=343.51 Aligned_cols=264 Identities=21% Similarity=0.300 Sum_probs=204.8
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47899999999999999999765 5899999999765443 345778899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|+++ ++.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..... .
T Consensus 82 ~~~~-~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP-V 155 (292)
T ss_dssp CCSE-EHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC-C
T ss_pred cCCC-CHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc-c
Confidence 9965 6766665532 4599999999999999999999999 9999999999999999999999999999876432 2
Q ss_pred ccccCCcccccccCccccccCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccc---ccc
Q 043720 979 HATTGVAGTFGYVAPEYALTCR-VSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVK---DVF 1054 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 1054 (1103)
.......||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... .................. ...
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~ 231 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND----VDDQLKRIFRLLGTPTEEQWPSMT 231 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS----HHHHHHHHHHHHCCCCTTTCTTGG
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC----HHHHHHHHHHHhCCCChhhhhhhc
Confidence 2334557899999999997765 79999999999999999999988753321 111111111111000000 000
Q ss_pred ------------cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1055 ------------NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1055 ------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
............+..+.+++.+|++.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 232 KLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp GSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000111123456788999999999999999999999874
No 135
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1e-37 Score=348.69 Aligned_cols=260 Identities=29% Similarity=0.445 Sum_probs=208.1
Q ss_pred cCCCCcceeccCCcccEEEEEEcC----CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEe-cCCeEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISP----GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRA-SGNEMFL 895 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~l 895 (1103)
.+|++.+.||+|+||+||+|.... ...||||++.........+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 468888999999999999997543 23689999887666667788999999999999999999999864 4567899
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+++|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999997643 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCC---ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccc
Q 043720 976 SET---HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKD 1052 (1103)
Q Consensus 976 ~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1103)
... .......+++.|+|||.+.+..++.++||||+|+++|||++|+.|+...... .. ....... .
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----~~---~~~~~~~-~---- 248 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FD---ITVYLLQ-G---- 248 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT----TT---HHHHHHT-T----
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH----HH---HHHHHhc-C----
Confidence 322 2234456788999999999999999999999999999999965554322111 11 1111111 1
Q ss_pred cccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1053 VFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
.....+..++..+.+++.+||+.||++||+++|+++.|+++..+
T Consensus 249 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 249 -----RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122344567899999999999999999999999999998653
No 136
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.8e-37 Score=344.35 Aligned_cols=262 Identities=21% Similarity=0.288 Sum_probs=204.1
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++...+..|+|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999765 688999999976543 23357789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++++|.++++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999998754 489999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.........|++.|+|||.+.+..++.++||||||+++|||++|+.||.... ............. .
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---------~~~~~~~~~~~~~----~- 253 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---------LSVMGAHINQAIP----R- 253 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---------HHHHHHHHHSCCC----C-
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---------HHHHHHHhccCCC----C-
Confidence 3334445678999999999999999999999999999999999999987321 1111111111110 0
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhhcCC
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRP-TMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~ 1102 (1103)
....+...+..+.+++.+||+.||++|| +++++++.|++..+.+
T Consensus 254 --~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 254 --PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp --GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred --ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0112345567799999999999999999 9999999999876543
No 137
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-37 Score=346.96 Aligned_cols=258 Identities=28% Similarity=0.415 Sum_probs=209.7
Q ss_pred CCCCcceeccCCcccEEEEEEcC----CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeE-EEE
Q 043720 822 DFNTSNCIGSGGFGTTYKAEISP----GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM-FLI 896 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lV 896 (1103)
.|...+.||+|+||+||+|.+.+ +..||+|++.........+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45567899999999999997543 2379999998766666778899999999999999999999999776655 999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+.+|+|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 99999999999997643 4589999999999999999999999 9999999999999999999999999999865433
Q ss_pred CC---ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 977 ET---HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 977 ~~---~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
.. .......+++.|+|||.+.+..++.++||||||+++|||++|+.|+..... ... ...... .
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~----~~~---~~~~~~-~------ 243 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID----PFD---LTHFLA-Q------ 243 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----GGG---HHHHHH-T------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC----HHH---HHHHhh-c------
Confidence 21 223345678999999999999999999999999999999997766543221 111 111111 1
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
......+...+..+.+++.+||+.||++|||++++++.|+++..
T Consensus 244 ---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 244 ---GRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp ---TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11122344566789999999999999999999999999999753
No 138
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-37 Score=356.14 Aligned_cols=254 Identities=24% Similarity=0.361 Sum_probs=206.2
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch----hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ----HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 46999999999999999999765 6899999998654321 236789999999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhhc--CCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC---EEEeecccc
Q 043720 896 IYNYLPGGNLENFIKART--SRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN---AYLSDFGLS 970 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~Dfgla 970 (1103)
||||+++++|.+++.... +..+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 999999999998886543 23589999999999999999999999 9999999999999986654 999999999
Q ss_pred cccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
....... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ........... .
T Consensus 181 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~~~-~ 249 (351)
T 3c0i_A 181 IQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIKGK-Y 249 (351)
T ss_dssp EECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHHTC-C
T ss_pred eEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHcCC-C
Confidence 8765432 22345679999999999999999999999999999999999999997321 11111111111 1
Q ss_pred cccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 KDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. ..+..+ ...+..+.+++.+||+.||++||++.|++++
T Consensus 250 ~--~~~~~~----~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 250 K--MNPRQW----SHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp C--CCHHHH----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred C--CCcccc----ccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 111111 2345778999999999999999999999864
No 139
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3.1e-37 Score=349.16 Aligned_cols=249 Identities=23% Similarity=0.340 Sum_probs=197.5
Q ss_pred cCCCCcceeccCCcccEEEEEE----cCCcEEEEEEcccccc---hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI----SPGILVAVKKLAVGRF---QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 893 (1103)
++|++.+.||+|+||+||+|+. .+++.||||++..... ......+.+|+.+++.++||||+++++++...+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5799999999999999999976 4689999999976532 23456688999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
|+||||+++++|.++++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 99999999999999998654 388999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 974 GTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 974 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... ........||+.|+|||++.+..++.++||||||+++|||++|+.||.... ............
T Consensus 172 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~----- 237 (327)
T 3a62_A 172 IHD-GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--------RKKTIDKILKCK----- 237 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTC-----
T ss_pred ccC-CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhCC-----
Confidence 322 222345678999999999999999999999999999999999999997321 111222221111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRP-----TMKQVVQC 1094 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++|| ++.|++++
T Consensus 238 ------~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 238 ------LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ------CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ------CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 122345567899999999999999999 77788764
No 140
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.4e-37 Score=344.04 Aligned_cols=261 Identities=26% Similarity=0.447 Sum_probs=200.2
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|.... .||||+++.... ....+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence 4679999999999999999997653 599999976543 345678999999999999999999999764 556899999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC-
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE- 977 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~- 977 (1103)
|+++++|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999996543 4589999999999999999999999 99999999999999999999999999997654322
Q ss_pred CccccCCcccccccCccccc---cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 978 THATTGVAGTFGYVAPEYAL---TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
........|++.|+|||++. ...++.++||||||+++|||++|+.||..... ... ............
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~-~~~~~~~~~~~~-- 245 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINN-------RDQ-IIEMVGRGSLSP-- 245 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCC-------HHH-HHHHHHHTSCCC--
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccch-------HHH-HHHHhcccccCc--
Confidence 22234457899999999986 56788899999999999999999999973221 111 112222221111
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
. .......++..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 246 --~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 246 --D-LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --C-TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --c-hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 0 111234566889999999999999999999999999999875
No 141
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.8e-37 Score=357.75 Aligned_cols=268 Identities=19% Similarity=0.264 Sum_probs=207.3
Q ss_pred hcCCCCcceeccC--CcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEE
Q 043720 820 TGDFNTSNCIGSG--GFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 820 ~~~~~~~~~lg~G--~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 895 (1103)
.++|++.+.||+| +||+||+|... +++.||||++..... ....+.+.+|+.+++.++|||||++++++.+.+..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4579999999999 99999999776 689999999976543 3345678899999999999999999999999999999
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999887556699999999999999999999999 999999999999999999999999998865421
Q ss_pred CC------CccccCCcccccccCcccccc--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHH--
Q 043720 976 SE------THATTGVAGTFGYVAPEYALT--CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLL-- 1045 (1103)
Q Consensus 976 ~~------~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 1045 (1103)
.. ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... ..........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~~~~~ 256 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ----MLLEKLNGTVPC 256 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTT----HHHHC-------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHhcCCCCc
Confidence 11 112223478999999999987 678999999999999999999999997432211 0000000000
Q ss_pred --h------------------cCcccccc---------cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1046 --R------------------QGQVKDVF---------NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1046 --~------------------~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. .....+.. ........+...+..+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 0 00000000 0000011233456779999999999999999999999875
No 142
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=4.8e-37 Score=343.31 Aligned_cols=262 Identities=17% Similarity=0.219 Sum_probs=211.3
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+..++.+ +|++++++++++......++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD---APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT---SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc---cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 35799999999999999999975 5689999999865433 24577899999999 7999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC-----EEEeecccccc
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN-----AYLSDFGLSRL 972 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~ki~Dfgla~~ 972 (1103)
||+ +++|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 86 e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 999 999999998653 4589999999999999999999999 9999999999999987776 99999999987
Q ss_pred cCCCCCc------cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHh
Q 043720 973 LGTSETH------ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLR 1046 (1103)
Q Consensus 973 ~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1103)
....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~ 235 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAAT-----NKQKYERIGE 235 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCC-----HHHHHHHHHH
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccc-----cHHHHHHHHh
Confidence 6543321 2345679999999999999999999999999999999999999997432211 1111111111
Q ss_pred cCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1047 QGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
..... .... ....++..+.+++.+||+.||++||++++|++.|+++.+
T Consensus 236 ~~~~~--~~~~----~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 236 KKQST--PLRE----LCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp HHHHS--CHHH----HTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred hccCc--cHHH----HHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 10000 0000 112456789999999999999999999999999999754
No 143
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1e-37 Score=345.06 Aligned_cols=252 Identities=25% Similarity=0.407 Sum_probs=203.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecC-CeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG-NEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|+.. ++.||||++.... ..+.+.+|+.++++++||||+++++++... +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 357999999999999999999876 8899999987543 457789999999999999999999987554 47899999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|+++++|.+++.......+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 99999999999876544578999999999999999999999 9999999999999999999999999998765322
Q ss_pred ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 979 HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ....... ...
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~~~~~~~----------~~~ 230 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPRV----------EKG 230 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--------GGHHHHH----------TTT
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH----------hcC
Confidence 223356889999999998899999999999999999998 9998863211 1111111 111
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.....+...+..+.+++.+||+.||++||+++|+++.|++++.
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 231 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 1223345567889999999999999999999999999999864
No 144
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9.7e-38 Score=353.87 Aligned_cols=262 Identities=21% Similarity=0.351 Sum_probs=211.1
Q ss_pred hcCCCCcceeccCCcccEEEEEE------cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI------SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM 893 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 893 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++...........+.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35799999999999999999974 346789999997665566677899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhhcC-----CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC---CCCEEEe
Q 043720 894 FLIYNYLPGGNLENFIKARTS-----RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD---DFNAYLS 965 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~ 965 (1103)
|+||||+++++|.++++.... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999987542 3488999999999999999999999 9999999999999984 4469999
Q ss_pred ecccccccCCCCC-ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHH
Q 043720 966 DFGLSRLLGTSET-HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 966 Dfgla~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
|||++........ .......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--------~~~~~~~ 257 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--------NQEVLEF 257 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--------HHHHHHH
Confidence 9999976533322 22234467889999999998899999999999999999998 888886321 1111111
Q ss_pred HHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1044 LLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
.. .. .....+..++..+.+++.+||+.||++||+++|++++|+.+.+.+
T Consensus 258 ~~-~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 258 VT-SG---------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HH-TT---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred Hh-cC---------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 11 11 111233456678999999999999999999999999999987654
No 145
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=348.76 Aligned_cols=254 Identities=26% Similarity=0.415 Sum_probs=200.9
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEeec
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNYL 900 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 900 (1103)
++|++.+.||+|+||+||+|.+. ++.||||++... ...+.+.+|+.++++++||||+++++++.+ ..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 46888999999999999999876 788999998643 345788999999999999999999998874 478999999
Q ss_pred CCCChHHHHHhhcC-CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC-EEEeecccccccCCCCC
Q 043720 901 PGGNLENFIKARTS-RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN-AYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 901 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~-~ki~Dfgla~~~~~~~~ 978 (1103)
++|+|.++++.... ..+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999986543 24788999999999999999999932229999999999999998887 799999999765322
Q ss_pred ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccc
Q 043720 979 HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAEL 1058 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1058 (1103)
.....|++.|+|||++.+..++.++||||||+++|||++|+.||..... .......... .. .
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~-~~---------~ 221 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG------PAFRIMWAVH-NG---------T 221 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCS------SHHHHHHHHH-TT---------C
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCc------cHHHHHHHHh-cC---------C
Confidence 2234689999999999999999999999999999999999999973221 1111111111 11 1
Q ss_pred cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1059 WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1059 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
........+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 222 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 222 RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 112234556789999999999999999999999999998864
No 146
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=9.9e-39 Score=357.86 Aligned_cols=264 Identities=23% Similarity=0.355 Sum_probs=191.0
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhc--CCCCceeEEEeEEecCC----eEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGN--VRHPNLVTLIGYRASGN----EMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 894 (1103)
++|++.+.||+|+||+||+|... ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 57999999999999999999876 899999998643 34567778888887 78999999999998766 789
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHH--------hCCCCCcccCCCCCCcEEECCCCCEEEee
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLH--------DQCAPRVLHRDVKPSNILLDDDFNAYLSD 966 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 966 (1103)
+||||+++|+|.++++.. .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999999764 3888999999999999999999 77 999999999999999999999999
Q ss_pred cccccccCCCCCc---cccCCcccccccCccccccC------CCCCcchhHHHHHHHHHHHhC----------CCCCCCC
Q 043720 967 FGLSRLLGTSETH---ATTGVAGTFGYVAPEYALTC------RVSDKADVYSYGVVLLELISD----------KKALDPS 1027 (1103)
Q Consensus 967 fgla~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslGvil~elltg----------~~p~~~~ 1027 (1103)
||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++| +.||...
T Consensus 152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 9999766433322 12344789999999998776 344689999999999999999 5555432
Q ss_pred CCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1028 FSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
.......... .. ............... ....++..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 232 ~~~~~~~~~~---~~-~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 232 VPSDPSVEEM---RK-VVCEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CC-CCCCC-C---HH-HHTTSCCCCCCCGGG---GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCCccHHHH---HH-HHHHhhcCCCccccc---cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 2211111111 11 111111111111111 12367788999999999999999999999999999998653
No 147
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-37 Score=357.41 Aligned_cols=268 Identities=16% Similarity=0.262 Sum_probs=208.2
Q ss_pred hcCCCCcceeccCCcccEEEEEEcC------CcEEEEEEcccccchh----------hHHHHHHHHHHHhcCCCCceeEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISP------GILVAVKKLAVGRFQH----------GVQQFHAEIKTLGNVRHPNLVTL 883 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~------~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l 883 (1103)
.++|++.+.||+|+||+||+|.+.. ++.||||++....... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999997765 4789999987653211 01234557778888999999999
Q ss_pred EeEEecC----CeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC--
Q 043720 884 IGYRASG----NEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD-- 957 (1103)
Q Consensus 884 ~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~-- 957 (1103)
++++... ...|+||||+ +++|.++++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 9998764 4589999999 99999999874 34599999999999999999999999 999999999999999
Q ss_pred CCCCEEEeecccccccCCCCCc------cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 043720 958 DDFNAYLSDFGLSRLLGTSETH------ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSH 1031 (1103)
Q Consensus 958 ~~~~~ki~Dfgla~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~ 1031 (1103)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~-- 266 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK-- 266 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT--
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc--
Confidence 8899999999999876433221 12344599999999999999999999999999999999999999974221
Q ss_pred CCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1032 GDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
............ .......++..+. ...++..+.+++..||+.||++||++++|++.|+++..
T Consensus 267 --~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 267 --DPKYVRDSKIRY-RENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp --CHHHHHHHHHHH-HHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHh-hhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 111111111111 1122222222221 23456789999999999999999999999999998754
No 148
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=379.57 Aligned_cols=254 Identities=23% Similarity=0.388 Sum_probs=206.3
Q ss_pred CCCcc-eeccCCcccEEEEEEc---CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 823 FNTSN-CIGSGGFGTTYKAEIS---PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 823 ~~~~~-~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
+.+.+ .||+|+||+||+|.+. ++..||||+++........+.+.+|+.++++++|||||++++++.. +..++|||
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E 415 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME 415 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEE
Confidence 34444 7999999999999764 4677999999877666677899999999999999999999999976 56899999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|+++|+|.+++... ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 416 ~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 416 MAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp CCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred eCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 99999999999754 34589999999999999999999999 999999999999999999999999999987643332
Q ss_pred cc--ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 979 HA--TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 979 ~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
.. .....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ...... +..
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~~-i~~-------- 554 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PEVMAF-IEQ-------- 554 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--------HHHHHH-HHT--------
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--------HHHHHH-HHc--------
Confidence 21 223345689999999999999999999999999999998 9999874321 111111 111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
......+..++..+.++|.+||+.||++||++++|++.|+.+.
T Consensus 555 -~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 555 -GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp -TCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred -CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 1123345567789999999999999999999999999999864
No 149
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=354.98 Aligned_cols=253 Identities=19% Similarity=0.316 Sum_probs=201.1
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCC--CceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRH--PNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|...+++.||||++..... ....+.+.+|+.++++++| +||+++++++...+..|+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 356899999999999999999888899999999876543 3445788999999999976 9999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
||+ .+++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++.....
T Consensus 88 ~e~-~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp ECC-CSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EeC-CCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 995 5889999998754 489999999999999999999999 999999999999997 578999999999876433
Q ss_pred CCc-cccCCcccccccCcccccc-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHH
Q 043720 977 ETH-ATTGVAGTFGYVAPEYALT-----------CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASML 1044 (1103)
Q Consensus 977 ~~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1103)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .......
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~- 232 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHA- 232 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHH-
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHHHH-
Confidence 322 2345679999999999864 6788899999999999999999999963211 1111111
Q ss_pred HhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 043720 1045 LRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCL 1095 (1103)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1095 (1103)
.++.......+...+..+.+++.+||+.||++|||++|++++-
T Consensus 233 --------~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 233 --------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp --------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --------HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 1122222233444456789999999999999999999998763
No 150
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2e-37 Score=351.33 Aligned_cols=258 Identities=26% Similarity=0.424 Sum_probs=207.7
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcE--EEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGIL--VAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 896 (1103)
++|++.+.||+|+||+||+|... ++.. ||||++.........+.+.+|+.+++++ +||||+++++++.+.+..|+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57999999999999999999654 4554 4999987655555667899999999999 899999999999999999999
Q ss_pred EeecCCCChHHHHHhhc--------------CCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCE
Q 043720 897 YNYLPGGNLENFIKART--------------SRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNA 962 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 962 (1103)
|||+++|+|.++++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999998653 24589999999999999999999999 99999999999999999999
Q ss_pred EEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHH
Q 043720 963 YLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWA 1041 (1103)
Q Consensus 963 ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1041 (1103)
||+|||+++.... ........+++.|+|||++.+..++.++||||||+++|||++ |+.||.... .....
T Consensus 182 kL~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~~~~ 251 (327)
T 1fvr_A 182 KIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAELY 251 (327)
T ss_dssp EECCTTCEESSCE--ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHH
T ss_pred EEcccCcCccccc--cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc--------HHHHH
Confidence 9999999974321 122233456889999999998889999999999999999998 999986321 11111
Q ss_pred HHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1042 SMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
.. . ........+...+..+.+++.+||+.||++||+++|++++|+++...
T Consensus 252 ~~-~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 252 EK-L---------PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HH-G---------GGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HH-h---------hcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11 1 11112233445678899999999999999999999999999987543
No 151
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=358.62 Aligned_cols=271 Identities=18% Similarity=0.233 Sum_probs=217.3
Q ss_pred cCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC--eEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN--EMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lV~ 897 (1103)
++|.+.+.||+|+||+||+|.... ++.||||++.........+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 468999999999999999997664 89999999987665556788899999999999999999999987755 789999
Q ss_pred eecCCCChHHHHHhhcC-CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE----CCCCCEEEeecccccc
Q 043720 898 NYLPGGNLENFIKARTS-RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL----DDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~ki~Dfgla~~ 972 (1103)
||+++|+|.++++.... ..+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 99999999999986543 3389999999999999999999999 99999999999999 7778899999999987
Q ss_pred cCCCCCccccCCcccccccCcccccc--------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHH
Q 043720 973 LGTSETHATTGVAGTFGYVAPEYALT--------CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASML 1044 (1103)
Q Consensus 973 ~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1103)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+....... .......
T Consensus 166 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~----~~~~~~~ 239 (396)
T 4eut_A 166 LEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN----KEVMYKI 239 (396)
T ss_dssp CCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC----HHHHHHH
T ss_pred ccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch----HHHHHHH
Confidence 64332 2334678999999999865 56778999999999999999999999754332221 2222222
Q ss_pred HhcCccccc------c--------cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1045 LRQGQVKDV------F--------NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1045 ~~~~~~~~~------~--------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
......... . +.......+...+..+.+++.+||+.||++||+++|+++.++++..
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 222111000 0 0011112346778889999999999999999999999999998754
No 152
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=348.47 Aligned_cols=246 Identities=27% Similarity=0.325 Sum_probs=196.4
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +++.||||++..... ......+..|+..+.++ +||||+++++++.+++..|+||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999776 689999998765432 23344555666665555 8999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+ +++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred ecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC-
Confidence 999 679999987754 4599999999999999999999999 9999999999999999999999999999876432
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
.......||++|+|||++.+ .++.++|||||||++|||++|+.|+... ..| ....... ....
T Consensus 211 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----------~~~--~~~~~~~----~~~~ 272 (311)
T 3p1a_A 211 -GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----------EGW--QQLRQGY----LPPE 272 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----------HHH--HHHTTTC----CCHH
T ss_pred -CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----------cHH--HHHhccC----CCcc
Confidence 22344568999999999876 7899999999999999999998776521 111 1111111 1111
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.+...+..+.+++.+||+.||++|||++|++++
T Consensus 273 ----~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 273 ----FTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ----cccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 122345789999999999999999999999874
No 153
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.7e-37 Score=339.21 Aligned_cols=248 Identities=27% Similarity=0.423 Sum_probs=204.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch--hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ--HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|... +++.||||++...... .....+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 457999999999999999999665 4678999998654322 2356788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~- 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence 99999999999998754 389999999999999999999999 999999999999999999999999999865432
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.......|++.|+|||.+.+..++.++||||+|+++|||++|+.||.... ..........
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~---------- 221 (279)
T 3fdn_A 162 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISR---------- 221 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHH----------
T ss_pred --ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--------HHHHHHHHHh----------
Confidence 22334578999999999999999999999999999999999999987321 1111111111
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.....+...+..+.+++.+||+.||++||+++|++++
T Consensus 222 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 222 -VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1112344456788999999999999999999999975
No 154
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.4e-36 Score=346.81 Aligned_cols=271 Identities=23% Similarity=0.334 Sum_probs=212.3
Q ss_pred HHHHHHhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhc--CCCCceeEEEeEEecCC
Q 043720 814 ESIIRATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGN--VRHPNLVTLIGYRASGN 891 (1103)
Q Consensus 814 ~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~ 891 (1103)
.......++|++.+.||+|+||+||+|... ++.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 35 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 35 LVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 333445678999999999999999999875 899999998643 34567788888877 78999999999998876
Q ss_pred ----eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHH--------hCCCCCcccCCCCCCcEEECCC
Q 043720 892 ----EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLH--------DQCAPRVLHRDVKPSNILLDDD 959 (1103)
Q Consensus 892 ----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH--------~~~~~~ivH~Dlk~~NIll~~~ 959 (1103)
..++||||+++|+|.++++.. .+++.+++.++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred CccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 899999999999999999764 3899999999999999999999 77 99999999999999999
Q ss_pred CCEEEeecccccccCCCCCc---cccCCcccccccCccccccCC------CCCcchhHHHHHHHHHHHhC----------
Q 043720 960 FNAYLSDFGLSRLLGTSETH---ATTGVAGTFGYVAPEYALTCR------VSDKADVYSYGVVLLELISD---------- 1020 (1103)
Q Consensus 960 ~~~ki~Dfgla~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~------~~~~sDvwslGvil~elltg---------- 1020 (1103)
+.+||+|||++......... ......|++.|+|||++.+.. ++.++||||||+++|||++|
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 99999999999876443322 234557899999999987652 33689999999999999999
Q ss_pred CCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1021 KKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1021 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
..||....... .....+.... ........+.... ....++..+.+++.+||+.||++||++.||+++|+++.+
T Consensus 264 ~~p~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~ 336 (342)
T 1b6c_B 264 QLPYYDLVPSD---PSVEEMRKVV-CEQKLRPNIPNRW---QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 336 (342)
T ss_dssp CCTTTTTSCSS---CCHHHHHHHH-TTSCCCCCCCGGG---GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCccccCcCc---ccHHHHHHHH-HHHHhCCCCcccc---cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 56665332211 1112222221 1111111111111 134677889999999999999999999999999999976
Q ss_pred CC
Q 043720 1101 SP 1102 (1103)
Q Consensus 1101 ~~ 1102 (1103)
+.
T Consensus 337 ~~ 338 (342)
T 1b6c_B 337 QE 338 (342)
T ss_dssp TT
T ss_pred Hh
Confidence 53
No 155
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=348.69 Aligned_cols=263 Identities=21% Similarity=0.306 Sum_probs=207.9
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEe----cCCeEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRA----SGNEMF 894 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~----~~~~~~ 894 (1103)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 35799999999999999999976 568999999986543 345678899999999999999999999986 345789
Q ss_pred EEEeecCCCChHHHHHhh--cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 895 LIYNYLPGGNLENFIKAR--TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
+||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999999864 235589999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCCc--------cccCCcccccccCccccccCC---CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHH
Q 043720 973 LGTSETH--------ATTGVAGTFGYVAPEYALTCR---VSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWA 1041 (1103)
Q Consensus 973 ~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~---~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 1041 (1103)
....... ......|++.|+|||++.... ++.++||||||+++|||++|+.||........ . .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~----~ 256 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD---S----V 256 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTS---C----H
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccc---h----h
Confidence 5321111 112335789999999987543 68899999999999999999999863111100 0 0
Q ss_pred HHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcCC
Q 043720 1042 SMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHSP 1102 (1103)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 1102 (1103)
.... ......+.....+..+.+++.+||+.||++||+++|++++|+++...+
T Consensus 257 ~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 257 ALAV---------QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp HHHH---------HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred hHHh---------hccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 0000 111112223455678999999999999999999999999999987543
No 156
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.6e-38 Score=356.51 Aligned_cols=266 Identities=23% Similarity=0.358 Sum_probs=213.7
Q ss_pred cCCCCcceeccCCcccEEEEEE-----cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEe--cCCeE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-----SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRA--SGNEM 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~ 893 (1103)
++|++.+.||+|+||+||+|.+ .+++.||||++.... ....+.+.+|+.++++++||||+++++++. +....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 4789999999999999999984 358899999987653 334677999999999999999999999886 45678
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
++||||+++++|.++++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999999998743 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCC------CCCCcchHHHHHHHH
Q 043720 974 GTSETH--ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSS------HGDGFNIISWASMLL 1045 (1103)
Q Consensus 974 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~ 1045 (1103)
...... ......+++.|+|||++.+..++.++||||||+++|||++|+.||...... .........
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~------ 251 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALS------ 251 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHH------
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHH------
Confidence 543322 233456788999999999888999999999999999999999998632110 000000000
Q ss_pred hcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1046 RQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
...+.+........+..++..+.+++.+||+.||++||+++|++++|+++..
T Consensus 252 ---~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 252 ---RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp ---HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred ---HHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111112222334456677889999999999999999999999999998754
No 157
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6e-37 Score=361.67 Aligned_cols=248 Identities=27% Similarity=0.421 Sum_probs=207.8
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|.+.+.||+|+||+||+|... +|+.||||++..... ....+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999776 689999999976532 234567899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999754 3489999999999999999999999 99999999999999999999999999998764322
Q ss_pred CccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||+.... ......... +.
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~i~~-~~------- 232 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--------PTLFKKICD-GI------- 232 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------HHHHHHHHT-TC-------
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhc-CC-------
Confidence 2345579999999999988765 6799999999999999999999973221 112222211 11
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 233 ---~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 233 ---FYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---cCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 11233455779999999999999999999999974
No 158
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=350.25 Aligned_cols=251 Identities=23% Similarity=0.298 Sum_probs=191.2
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|... +++.||||++.... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 457999999999999999999776 47889999987543 34568899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC---CCCEEEeecccccccCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD---DFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~Dfgla~~~~~ 975 (1103)
|+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 999999999997643 489999999999999999999999 9999999999999975 88999999999986543
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......... .....
T Consensus 204 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~~i~-~~~~~---- 269 (349)
T 2w4o_A 204 Q--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG-------DQFMFRRIL-NCEYY---- 269 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC-------HHHHHHHHH-TTCCC----
T ss_pred c--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc-------cHHHHHHHH-hCCCc----
Confidence 2 223345789999999999999999999999999999999999999973321 011111111 11110
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.........+..+.+++.+||+.||++||++.|++++
T Consensus 270 --~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 270 --FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp --CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011123456789999999999999999999999874
No 159
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.5e-37 Score=366.96 Aligned_cols=255 Identities=23% Similarity=0.318 Sum_probs=211.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356889999999999999999775 689999999976532 23456788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++|+|.+++.......+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 9999999999999876656699999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............ .
T Consensus 340 ~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~----~~~~~i~~~i~~-~-------- 404 (576)
T 2acx_A 340 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKREEVERLVKE-V-------- 404 (576)
T ss_dssp C--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC----CCHHHHHHHHHH-C--------
T ss_pred c--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc----hhHHHHHHHhhc-c--------
Confidence 2 234458999999999999989999999999999999999999999743221 111111111111 1
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRP-----TMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 1094 (1103)
....+...+..+.+++.+||+.||++|| +++||+++
T Consensus 405 --~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 405 --PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred --cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 1123345667899999999999999999 78888764
No 160
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.7e-37 Score=364.18 Aligned_cols=250 Identities=23% Similarity=0.277 Sum_probs=198.7
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEccccc--chhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGR--FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|... +++.||||++.... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 357999999999999999999754 58999999997642 233456788999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHh-CCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHD-QCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997754 48999999999999999999998 8 999999999999999999999999999975432
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............
T Consensus 302 ~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~------- 365 (446)
T 4ejn_A 302 D-GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILMEE------- 365 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-------
T ss_pred C-CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHHhCC-------
Confidence 2 223445689999999999999999999999999999999999999997321 111222221111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRP-----TMKQVVQC 1094 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++|| +++|++++
T Consensus 366 ----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 ----IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 123345567899999999999999999 99999863
No 161
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.8e-37 Score=357.84 Aligned_cols=251 Identities=19% Similarity=0.317 Sum_probs=200.8
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCC--CCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVR--HPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.+|++.+.||+|+||+||+|....++.||||++..... ....+.+.+|+.++++++ ||||+++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 45999999999999999999888899999999976543 345678999999999996 599999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
| +.+++|.++++... .+++.++..++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 55889999998754 488899999999999999999999 999999999999996 5799999999998764332
Q ss_pred Cc-cccCCcccccccCcccccc-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHH
Q 043720 978 TH-ATTGVAGTFGYVAPEYALT-----------CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLL 1045 (1103)
Q Consensus 978 ~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1103)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~~~- 280 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHAI- 280 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHHH-
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHHHH-
Confidence 22 2345679999999999865 4688899999999999999999999963211 11111111
Q ss_pred hcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1046 RQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
++.......+...+..+.+++.+||+.||++||+++|++++
T Consensus 281 --------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 281 --------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp --------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --------hCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11122222233345678999999999999999999999865
No 162
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.4e-37 Score=348.31 Aligned_cols=267 Identities=21% Similarity=0.386 Sum_probs=204.3
Q ss_pred HHHHHHHhcCCCCcceeccCCcccEEEEEEc----CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEE
Q 043720 813 YESIIRATGDFNTSNCIGSGGFGTTYKAEIS----PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYR 887 (1103)
Q Consensus 813 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 887 (1103)
..++....++|.+.+.||+|+||+||+|... .++.||||++..... ....+.+.+|+.++++++||||+++++++
T Consensus 26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 3344445577999999999999999999654 345899999976543 34567799999999999999999999998
Q ss_pred ecCC-----eEEEEEeecCCCChHHHHHhh----cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC
Q 043720 888 ASGN-----EMFLIYNYLPGGNLENFIKAR----TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD 958 (1103)
Q Consensus 888 ~~~~-----~~~lV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~ 958 (1103)
...+ ..++||||+++|+|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~ 182 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRD 182 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECT
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcC
Confidence 7755 359999999999999999642 235689999999999999999999999 9999999999999999
Q ss_pred CCCEEEeecccccccCCCCCc-cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcc
Q 043720 959 DFNAYLSDFGLSRLLGTSETH-ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFN 1036 (1103)
Q Consensus 959 ~~~~ki~Dfgla~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~ 1036 (1103)
++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ..
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~ 257 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-----HE 257 (313)
T ss_dssp TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GG
T ss_pred CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----HH
Confidence 999999999999876433322 2234457889999999999999999999999999999999 8888763221 11
Q ss_pred hHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1037 IISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1037 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
........ .....+..++..+.+++.+||+.||++||++++++++|+++.+
T Consensus 258 ---~~~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~ 308 (313)
T 3brb_A 258 ---MYDYLLHG----------HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308 (313)
T ss_dssp ---HHHHHHTT----------CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHcC----------CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111111 1122345566789999999999999999999999999999754
No 163
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.7e-37 Score=351.77 Aligned_cols=245 Identities=26% Similarity=0.336 Sum_probs=195.1
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHH-HhcCCCCceeEEEeEEecCCeEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKT-LGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
++|++.+.||+|+||+||+|+.+ +++.||||++..... ....+.+.+|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 46999999999999999999776 478899999976543 2234556777776 5778999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++|+|.+++++.. .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 118 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999998754 488999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+....
T Consensus 193 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~-------- 255 (373)
T 2r5t_A 193 -NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKP-------- 255 (373)
T ss_dssp -CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--------HHHHHHHHHHSC--------
T ss_pred -CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhcc--------
Confidence 223445689999999999999999999999999999999999999997321 112222222111
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQ 1090 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 1090 (1103)
...+...+..+.+++.+||+.||++||++.+
T Consensus 256 ---~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 256 ---LQLKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ---CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ---cCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 1123345678999999999999999999854
No 164
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6e-37 Score=338.22 Aligned_cols=247 Identities=25% Similarity=0.389 Sum_probs=184.5
Q ss_pred cCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|.. .+++.||+|++..... .+..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5799999999999999999975 4689999999876532 234567899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+ ++++.+++.... .+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 778988887654 489999999999999999999999 99999999999999999999999999997654322
Q ss_pred CccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
......|++.|+|||.+.+..+ +.++||||+|+++|||++|+.||.... ......... ...
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~-~~~------- 228 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNIS-NGV------- 228 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HTC-------
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-hCC-------
Confidence 2234568999999999987765 689999999999999999999997321 111111111 111
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 229 ---~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 ---YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 12234456779999999999999999999999864
No 165
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=353.80 Aligned_cols=271 Identities=24% Similarity=0.368 Sum_probs=202.0
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHH--HHHHHHhcCCCCceeEEEeEEec-----CCe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFH--AEIKTLGNVRHPNLVTLIGYRAS-----GNE 892 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~l~~~~~~-----~~~ 892 (1103)
.++|++.+.||+|+||+||+|+. +++.||||++.... ...+. .|+..+..++||||+++++++.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 35799999999999999999976 48999999987543 23333 44444556899999999985532 336
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC------CCCcccCCCCCCcEEECCCCCEEEee
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQC------APRVLHRDVKPSNILLDDDFNAYLSD 966 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------~~~ivH~Dlk~~NIll~~~~~~ki~D 966 (1103)
+++||||+++|+|.++++... .++..+.+++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~D 163 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECC
T ss_pred EEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEee
Confidence 799999999999999997654 688999999999999999999863 33899999999999999999999999
Q ss_pred cccccccCCCC-------CccccCCcccccccCcccccc-------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 043720 967 FGLSRLLGTSE-------THATTGVAGTFGYVAPEYALT-------CRVSDKADVYSYGVVLLELISDKKALDPSFSSHG 1032 (1103)
Q Consensus 967 fgla~~~~~~~-------~~~~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~ 1032 (1103)
||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+......
T Consensus 164 FG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~ 243 (336)
T 3g2f_A 164 FGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPE 243 (336)
T ss_dssp CTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCC
T ss_pred ccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhH
Confidence 99998764322 122334579999999999976 4566789999999999999999888765443221
Q ss_pred CCcchH---------HHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1033 DGFNII---------SWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1033 ~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
...... ...............+... ......++..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 244 YQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA--WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT--CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhhhcccCCCchHHHHHhhhcccccCCCCCcc--cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 111110 0111111111111111111 11233467789999999999999999999999999999864
No 166
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=344.98 Aligned_cols=265 Identities=24% Similarity=0.311 Sum_probs=202.1
Q ss_pred HhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccch----hhHHHHHHHHHHHhcCC---CCceeEEEeEEecC
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQ----HGVQQFHAEIKTLGNVR---HPNLVTLIGYRASG 890 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 890 (1103)
..++|++.+.||+|+||+||+|.. .+++.||||++...... .....+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999975 46899999998754321 12345667777777664 99999999999775
Q ss_pred C-----eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEe
Q 043720 891 N-----EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLS 965 (1103)
Q Consensus 891 ~-----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~ 965 (1103)
. ..++||||+. ++|.++++......+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 5899999996 6999999887666699999999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHH
Q 043720 966 DFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLL 1045 (1103)
Q Consensus 966 Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1103)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 163 Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~ 235 (308)
T 3g33_A 163 DFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----ADQLGKIFDLI 235 (308)
T ss_dssp SCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH-----HHHHHHHHHHH
T ss_pred eCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHh
Confidence 99999865432 223456789999999999999999999999999999999999999974221 11111111111
Q ss_pred hcCccccc---c---ccccc-------CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1046 RQGQVKDV---F---NAELW-------ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1046 ~~~~~~~~---~---~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
........ . ..... .......+..+.+++.+|++.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 236 GLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 00000000 0 00000 00012345778999999999999999999999875
No 167
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.5e-37 Score=338.81 Aligned_cols=252 Identities=26% Similarity=0.364 Sum_probs=201.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
++|.+.+.||+|+||+||+|... ++..||+|++.........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46999999999999999999764 58899999998776666678899999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhh--cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE---CCCCCEEEeecccccccC
Q 043720 900 LPGGNLENFIKAR--TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL---DDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 900 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~Dfgla~~~~ 974 (1103)
+++|+|.+++... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999998654 235699999999999999999999999 99999999999999 456789999999998654
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
.. .......|++.|+|||++. ..++.++||||+|+++|||++|+.||.... ..............
T Consensus 179 ~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~---- 243 (285)
T 3is5_A 179 SD--EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS--------LEEVQQKATYKEPN---- 243 (285)
T ss_dssp ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCC----
T ss_pred Cc--ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC--------HHHHHhhhccCCcc----
Confidence 32 2234457899999999886 468899999999999999999999997321 11111111111100
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. .......+..+.+++.+||+.||++||+++|++++
T Consensus 244 ---~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 244 ---Y-AVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp ---C-CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred ---c-ccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00112245678999999999999999999999864
No 168
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.9e-37 Score=340.99 Aligned_cols=254 Identities=26% Similarity=0.372 Sum_probs=208.8
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 357899999999999999999765 6899999999776655567889999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|+++++|.++++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+........
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999998654 3489999999999999999999999 999999999999999999999999999986543221
Q ss_pred -ccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 979 -HATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 979 -~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||...... ......| . ...
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~----~-~~~------- 225 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS---CQEYSDW----K-EKK------- 225 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT---SHHHHHH----H-TTC-------
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH---HHHHHHh----h-hcc-------
Confidence 22345678999999999987665 67899999999999999999999743221 1111111 1 110
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.........+..+.+++.+||+.||++|||++|++++
T Consensus 226 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 226 -TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0011123456778999999999999999999999874
No 169
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=2.5e-37 Score=344.30 Aligned_cols=257 Identities=25% Similarity=0.332 Sum_probs=206.9
Q ss_pred hcCCCCcc-eeccCCcccEEEEEEc---CCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 820 TGDFNTSN-CIGSGGFGTTYKAEIS---PGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 820 ~~~~~~~~-~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
.++|++.+ .||+|+||+||+|... .++.||||++...... ...+.+.+|+.+++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34677777 8999999999999543 3688999999765432 3467899999999999999999999999 566789
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccC
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~ 974 (1103)
+||||+++++|.++++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 94 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 9999999999999998753 489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCcc--ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccc
Q 043720 975 TSETHA--TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVK 1051 (1103)
Q Consensus 975 ~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1103)
...... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ..... .....
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~-~~~~~--- 236 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTA-MLEKG--- 236 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHH-HHHTT---
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHH-HHHcC---
Confidence 443322 223346789999999988888999999999999999999 9999873211 11111 11111
Q ss_pred ccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1052 DVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.....+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 237 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 237 ------ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1122345667889999999999999999999999999998743
No 170
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-37 Score=352.57 Aligned_cols=253 Identities=20% Similarity=0.243 Sum_probs=207.6
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|... +++.||+|++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 357999999999999999999765 588999999876533 245678999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC--CCCEEEeecccccccCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD--DFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~ki~Dfgla~~~~~~ 976 (1103)
|+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 129 FLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp CCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred cCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 999999999987543 3589999999999999999999999 9999999999999974 567999999999876533
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 205 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--------~~~~~~~i~~~~~------- 267 (387)
T 1kob_A 205 EI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--------DLETLQNVKRCDW------- 267 (387)
T ss_dssp SC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHCCC-------
T ss_pred cc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCC-------
Confidence 22 233478999999999999999999999999999999999999997321 1111222111110
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..........+..+.+++.+||+.||++||++.|++++
T Consensus 268 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 268 EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 01111223456789999999999999999999999875
No 171
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.7e-37 Score=347.49 Aligned_cols=259 Identities=23% Similarity=0.347 Sum_probs=198.8
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC----e
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN----E 892 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~ 892 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++..... ......+.+|+.++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35799999999999999999975 5689999999976533 334567899999999999999999999886643 3
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.|+||||+++++|.++++... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 499999999999999998654 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 973 LGTSET--HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 973 ~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
...... .......|++.|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~--------~~~~~~~~~~~~~ 237 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP--------VSVAYQHVREDPI 237 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHhcCCCC
Confidence 643322 223345789999999999999999999999999999999999999973221 1111111111110
Q ss_pred cccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHH-HHHHhh
Q 043720 1051 KDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVV-QCLKQI 1098 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~L~~i 1098 (1103)
. .. ......+.++.+++.+||+.||++||++.+++ +.+.++
T Consensus 238 ~----~~---~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 238 P----PS---ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp C----HH---HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred C----cc---cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0 00 01223567799999999999999999666554 555554
No 172
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.1e-37 Score=344.58 Aligned_cols=262 Identities=25% Similarity=0.378 Sum_probs=203.1
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEccccc--chhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGR--FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++.... .....+.+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35799999999999999999976 468999999987532 234567789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhh--cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccC
Q 043720 897 YNYLPGGNLENFIKAR--TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~ 974 (1103)
|||+++++|.++++.. ....+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999999753 235589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.... ........... .....
T Consensus 188 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-~~~~~--- 256 (310)
T 2wqm_A 188 SKT-TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIE-QCDYP--- 256 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHHH-TTCSC---
T ss_pred CCC-ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc------hhHHHHHHHhh-cccCC---
Confidence 322 22334568999999999999999999999999999999999999986321 11122222211 11111
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.......+..+.+++.+||+.||++||++++|++.|+++++
T Consensus 257 -----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 257 -----PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp -----CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 11123456789999999999999999999999999999865
No 173
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.6e-37 Score=351.19 Aligned_cols=262 Identities=23% Similarity=0.284 Sum_probs=205.2
Q ss_pred HHHHHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEccccc----chhhHHHHHHHHHHHhcCCCCceeEEEeEEec
Q 043720 815 SIIRATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGR----FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS 889 (1103)
Q Consensus 815 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 889 (1103)
++....++|++.+.||+|+||+||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34556778999999999999999999764 57899999987543 23456789999999999999999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhhc--------------------------------------CCcccHHHHHHHHHHHHH
Q 043720 890 GNEMFLIYNYLPGGNLENFIKART--------------------------------------SRAVDWKILHKIALDVAS 931 (1103)
Q Consensus 890 ~~~~~lV~E~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~ia~ 931 (1103)
.+..++||||+++|+|.++++... ...+++..++.++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 999999999999999999985210 122467888999999999
Q ss_pred HHHHHHhCCCCCcccCCCCCCcEEECCCC--CEEEeecccccccCCCC---CccccCCcccccccCcccccc--CCCCCc
Q 043720 932 ALAYLHDQCAPRVLHRDVKPSNILLDDDF--NAYLSDFGLSRLLGTSE---THATTGVAGTFGYVAPEYALT--CRVSDK 1004 (1103)
Q Consensus 932 gL~~LH~~~~~~ivH~Dlk~~NIll~~~~--~~ki~Dfgla~~~~~~~---~~~~~~~~g~~~y~aPE~~~~--~~~~~~ 1004 (1103)
||+|||++ +|+||||||+||+++.++ .+||+|||+++.+.... ........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 99999999 999999999999998776 89999999998653322 223345678999999999865 678899
Q ss_pred chhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCC
Q 043720 1005 ADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLST 1084 (1103)
Q Consensus 1005 sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 1084 (1103)
+||||||+++|||++|+.||..... ............. .........+..+.+++.+||+.||++
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVND--------ADTISQVLNKKLC-------FENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCC-------TTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCh--------HHHHHHHHhcccc-------cCCcccccCCHHHHHHHHHHcCCChhH
Confidence 9999999999999999999973221 1122222211110 000111235678999999999999999
Q ss_pred CCCHHHHHHH
Q 043720 1085 RPTMKQVVQC 1094 (1103)
Q Consensus 1085 RPs~~evl~~ 1094 (1103)
||++.|++++
T Consensus 322 Rps~~~~l~h 331 (345)
T 3hko_A 322 RFDAMRALQH 331 (345)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHhcC
Confidence 9999999874
No 174
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5e-37 Score=341.56 Aligned_cols=251 Identities=20% Similarity=0.307 Sum_probs=204.1
Q ss_pred cCCCCcceeccCCcccEEEEEEcC-C-------cEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISP-G-------ILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNE 892 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 892 (1103)
++|++.+.||+|+||+||+|.... + ..||+|++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 468899999999999999996553 3 579999986543 3356789999999999999999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC--------EEE
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN--------AYL 964 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~--------~ki 964 (1103)
.++||||+++|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeee
Confidence 999999999999999998753 3489999999999999999999999 9999999999999998887 999
Q ss_pred eecccccccCCCCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH
Q 043720 965 SDFGLSRLLGTSETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 965 ~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
+|||++...... ....+++.|+|||++.+ ..++.++||||||+++|||++|+.|+..... .......
T Consensus 163 ~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-------~~~~~~~ 230 (289)
T 4fvq_A 163 SDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-------SQRKLQF 230 (289)
T ss_dssp CCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-------HHHHHHH
T ss_pred ccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-------hHHHHHH
Confidence 999998754321 23457889999999987 7789999999999999999997666542211 1111111
Q ss_pred HHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1044 LLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.... ...+...+..+.+++.+||+.||++|||++|++++|+++..
T Consensus 231 ~~~~------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 231 YEDR------------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HHTT------------CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred hhcc------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 1110 11122334568999999999999999999999999999864
No 175
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.9e-36 Score=335.92 Aligned_cols=253 Identities=23% Similarity=0.330 Sum_probs=208.0
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999765 588999999976543 344677889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC---EEEeecccccccC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN---AYLSDFGLSRLLG 974 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~Dfgla~~~~ 974 (1103)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 9999999999987754 489999999999999999999999 9999999999999986655 9999999998764
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ....... ..+...
T Consensus 160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--------~~~~~~~-~~~~~~--- 225 (284)
T 3kk8_A 160 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQI-KAGAYD--- 225 (284)
T ss_dssp SSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHH-HHTCCC---
T ss_pred cCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--------hHHHHHH-Hhcccc---
Confidence 322 23446789999999999999999999999999999999999999963211 1111111 111110
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.........+..+.+++.+|++.||++||+++|++++
T Consensus 226 ---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 226 ---YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp ---CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ---CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0011123456779999999999999999999999874
No 176
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.7e-37 Score=351.97 Aligned_cols=208 Identities=25% Similarity=0.342 Sum_probs=182.1
Q ss_pred CCCCHHHHHHHhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-----CCceeE
Q 043720 809 VPLTYESIIRATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-----HPNLVT 882 (1103)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~ 882 (1103)
..+++.+.....++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+..|+.+++.++ ||||++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 3455555555678999999999999999999976 46889999998743 234566788999999886 999999
Q ss_pred EEeEEecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC----
Q 043720 883 LIGYRASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD---- 958 (1103)
Q Consensus 883 l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~---- 958 (1103)
+++++...+..++||||+ +++|.+++.......+++.++..++.||+.||+|||++ +|+||||||+||+++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccc
Confidence 999999999999999999 89999999887666799999999999999999999999 9999999999999975
Q ss_pred ---------------------CCCEEEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHH
Q 043720 959 ---------------------DFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLEL 1017 (1103)
Q Consensus 959 ---------------------~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~el 1017 (1103)
++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCC----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 78899999999986432 22345789999999999999999999999999999999
Q ss_pred HhCCCCCCC
Q 043720 1018 ISDKKALDP 1026 (1103)
Q Consensus 1018 ltg~~p~~~ 1026 (1103)
++|+.||..
T Consensus 253 l~g~~pf~~ 261 (360)
T 3llt_A 253 YTGSLLFRT 261 (360)
T ss_dssp HHSSCSCCC
T ss_pred HHCCCCCCC
Confidence 999999974
No 177
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=350.83 Aligned_cols=243 Identities=23% Similarity=0.336 Sum_probs=204.4
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccch-------hhHHHHHHHHHHHhcCCCCceeEEEeEEecCC
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQ-------HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN 891 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 891 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++...... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45799999999999999999965 46899999999765421 13345778999999999999999999999999
Q ss_pred eEEEEEeecCCC-ChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccc
Q 043720 892 EMFLIYNYLPGG-NLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLS 970 (1103)
Q Consensus 892 ~~~lV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla 970 (1103)
..++||||+.+| +|.++++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 999999999777 9999998654 499999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ 1049 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1103)
....... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....
T Consensus 178 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------------------- 235 (335)
T 3dls_A 178 AYLERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-------------------- 235 (335)
T ss_dssp EECCTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------------
T ss_pred eECCCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------------
Confidence 8764332 2334578999999999988776 7789999999999999999999963111
Q ss_pred ccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1050 VKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..... ...+...+..+.+++.+||+.||++||+++|++++
T Consensus 236 ---~~~~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 ---TVEAA--IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---GTTTC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---HHhhc--cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 11233356779999999999999999999999986
No 178
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=9.5e-37 Score=344.66 Aligned_cols=253 Identities=22% Similarity=0.310 Sum_probs=208.0
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchh-----hHHHHHHHHHHHhcCCCCceeEEEeEEecCCeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQH-----GVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM 893 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 893 (1103)
.++|++.+.||+|+||+||+|... +++.||||++....... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356999999999999999999765 58999999997654322 367899999999999999999999999999999
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC----CEEEeeccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF----NAYLSDFGL 969 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~ki~Dfgl 969 (1103)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999764 3489999999999999999999999 999999999999999888 799999999
Q ss_pred ccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc
Q 043720 970 SRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ 1049 (1103)
Q Consensus 970 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1103)
+....... ......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 166 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~- 234 (321)
T 2a2a_A 166 AHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANITSVS- 234 (321)
T ss_dssp CEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTC-
T ss_pred ceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhcc-
Confidence 98764332 23445789999999999999999999999999999999999999963211 11111111111
Q ss_pred ccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1050 VKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+... ....+..+.+++.+|++.||++|||++|++++
T Consensus 235 --~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 235 --YDFDEEF----FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp --CCCCHHH----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred --cccChhh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0011111 12345678999999999999999999999874
No 179
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-37 Score=352.35 Aligned_cols=255 Identities=24% Similarity=0.343 Sum_probs=208.0
Q ss_pred cCCCCcceeccCCcccEEEEEE----cCCcEEEEEEcccccc---hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI----SPGILVAVKKLAVGRF---QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNE 892 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 892 (1103)
++|++.+.||+|+||+||+|+. .+++.||||+++.... ....+.+.+|+.+++.+ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5799999999999999999977 3689999999875432 22345677899999999 69999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred EEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999998754 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCccccCCcccccccCcccccc--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 973 LGTSETHATTGVAGTFGYVAPEYALT--CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 973 ~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .............
T Consensus 209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~~~--- 281 (355)
T 1vzo_A 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK----NSQAEISRRILKS--- 281 (355)
T ss_dssp CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC----CCHHHHHHHHHHC---
T ss_pred cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc----chHHHHHHHHhcc---
Confidence 65444444455679999999999985 45788999999999999999999999743221 1112222222111
Q ss_pred cccccccccCCCChhHHHHHHHHHHHccccCCCCCC-----CHHHHHHHH
Q 043720 1051 KDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRP-----TMKQVVQCL 1095 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 1095 (1103)
....+...+..+.+++.+||+.||++|| +++|++++.
T Consensus 282 --------~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 --------EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp --------CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred --------CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1123445667899999999999999999 999998764
No 180
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.7e-37 Score=350.28 Aligned_cols=249 Identities=25% Similarity=0.351 Sum_probs=204.2
Q ss_pred cCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
+.|+..+.||+|+||+||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3488889999999999999975 5689999999875432 334567899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+. |++.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 134 e~~~-g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp ECCS-EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred ecCC-CCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 9996 68988886543 4589999999999999999999999 999999999999999999999999999976532
Q ss_pred CccccCCcccccccCccccc---cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 978 THATTGVAGTFGYVAPEYAL---TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||.... .............
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~--------~~~~~~~~~~~~~----- 270 (348)
T 1u5q_A 207 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNES----- 270 (348)
T ss_dssp ---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSCC-----
T ss_pred ---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHhcCC-----
Confidence 23457899999999984 5678999999999999999999999986321 1111222221111
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLK 1096 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 1096 (1103)
....+...+..+.+++.+||+.||++|||+++++++-.
T Consensus 271 ----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 271 ----PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 01112345677899999999999999999999987644
No 181
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.7e-37 Score=337.99 Aligned_cols=251 Identities=24% Similarity=0.416 Sum_probs=187.3
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35689999999999999999976 4689999999865432 22357789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++++|.++++... ..+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999998643 4589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||........ .......
T Consensus 166 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----------------~~~~~~~ 227 (278)
T 3cok_A 166 HE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----------------LNKVVLA 227 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCSS
T ss_pred CC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----------------HHHHhhc
Confidence 22 22345789999999999998899999999999999999999999974322110 0000001
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. ...+...+..+.+++.+||+.||++||+++|++++
T Consensus 228 ~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 228 D--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp C--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred c--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 1 11234456789999999999999999999999874
No 182
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=349.80 Aligned_cols=248 Identities=23% Similarity=0.285 Sum_probs=198.3
Q ss_pred CcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEeecCCC
Q 043720 825 TSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNYLPGG 903 (1103)
Q Consensus 825 ~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~g 903 (1103)
..+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++...+..++||||++++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3567999999999999764 689999999876543 34678999999999999999999999999999999999999999
Q ss_pred ChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE--CCCCCEEEeecccccccCCCCCccc
Q 043720 904 NLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL--DDDFNAYLSDFGLSRLLGTSETHAT 981 (1103)
Q Consensus 904 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll--~~~~~~ki~Dfgla~~~~~~~~~~~ 981 (1103)
+|.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++...... ..
T Consensus 172 ~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~--~~ 245 (373)
T 2x4f_A 172 ELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE--KL 245 (373)
T ss_dssp EEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--BC
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--cc
Confidence 9999987643 3489999999999999999999999 99999999999999 667889999999998764332 23
Q ss_pred cCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccCC
Q 043720 982 TGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWAS 1061 (1103)
Q Consensus 982 ~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1061 (1103)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............. +...
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~~~~~~---~~~~---- 310 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--------DAETLNNILACRWD---LEDE---- 310 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCC---SCSG----
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhccCC---CChh----
Confidence 34578999999999999999999999999999999999999997321 11122222211110 0011
Q ss_pred CChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1062 GPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1062 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.....+..+.+++.+||+.||++||+++|++++
T Consensus 311 ~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 311 EFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 112446789999999999999999999999973
No 183
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.6e-36 Score=361.74 Aligned_cols=254 Identities=26% Similarity=0.343 Sum_probs=210.1
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +|+.||||++..... ....+.+.+|+.++++++||||+++++++...+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888999999999999999775 589999999976533 234577899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhc--CCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 898 NYLPGGNLENFIKART--SRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||+++|+|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999997644 34599999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...............
T Consensus 342 ~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~----~~~~~~~~~~i~~~~------- 409 (543)
T 3c4z_A 342 GQ-TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE----KVENKELKQRVLEQA------- 409 (543)
T ss_dssp TC-CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC----CCCHHHHHHHHHHCC-------
T ss_pred CC-cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc----chhHHHHHHHHhhcc-------
Confidence 32 223446899999999999999999999999999999999999999974321 111122222222111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTM-----KQVVQ 1093 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 1093 (1103)
...+...+..+.+++.+||+.||++||++ ++|++
T Consensus 410 ----~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 ----VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ----cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 12344567889999999999999999965 66664
No 184
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.8e-37 Score=350.65 Aligned_cols=265 Identities=17% Similarity=0.221 Sum_probs=202.5
Q ss_pred cCCCCcceeccCCcccEEEEEEc----CCcEEEEEEcccccchh----------hHHHHHHHHHHHhcCCCCceeEEEeE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS----PGILVAVKKLAVGRFQH----------GVQQFHAEIKTLGNVRHPNLVTLIGY 886 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~h~niv~l~~~ 886 (1103)
++|++.+.||+|+||+||+|... .+..||||++....... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57999999999999999999775 57889999987653211 12346788999999999999999999
Q ss_pred Eec----CCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC--
Q 043720 887 RAS----GNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF-- 960 (1103)
Q Consensus 887 ~~~----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~-- 960 (1103)
+.. ....|+||||+ +++|.++++... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCC
Confidence 887 77899999999 999999997654 599999999999999999999999 999999999999998877
Q ss_pred CEEEeecccccccCCCCC------ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 043720 961 NAYLSDFGLSRLLGTSET------HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDG 1034 (1103)
Q Consensus 961 ~~ki~Dfgla~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~ 1034 (1103)
.+||+|||+++.+..... .......|++.|+|||++.+..++.++|||||||++|||++|+.||..... .
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~ 266 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK----D 266 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT----C
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc----c
Confidence 999999999987643221 112456789999999999999999999999999999999999999963211 1
Q ss_pred cchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1035 FNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
.............. ........ ......+..+.+++.+||+.||++||++++|++.|+++.
T Consensus 267 ~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 267 PVAVQTAKTNLLDE-LPQSVLKW---APSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHHHHT-TTHHHHHH---SCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred cHHHHHHHHhhccc-ccHHHHhh---ccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 11111111111111 11111000 011245678999999999999999999999999999864
No 185
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-36 Score=353.57 Aligned_cols=265 Identities=25% Similarity=0.370 Sum_probs=193.9
Q ss_pred HHhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEccccc-chhhHHHHHHHHHHHhcCC-CCceeEEEeEEecCC--e
Q 043720 818 RATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGR-FQHGVQQFHAEIKTLGNVR-HPNLVTLIGYRASGN--E 892 (1103)
Q Consensus 818 ~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~ 892 (1103)
...++|++.+.||+|+||+||+|.. .+++.||||++.... .....+.+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3457899999999999999999965 468999999986542 2345677889999999997 999999999997543 7
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.|+||||++ ++|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 899999996 6999999764 389999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC--------------------CccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 043720 973 LGTSE--------------------THATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSH 1031 (1103)
Q Consensus 973 ~~~~~--------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~ 1031 (1103)
..... .......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-- 236 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST-- 236 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH--
Confidence 53211 112344679999999999876 6789999999999999999999999974321
Q ss_pred CCCcchHHHHHHHHhcCc-----------------------------cccccc----ccccCCCChhHHHHHHHHHHHcc
Q 043720 1032 GDGFNIISWASMLLRQGQ-----------------------------VKDVFN----AELWASGPHDDLEDMLHLALRCT 1078 (1103)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~----~~~~~~~~~~~~~~l~~li~~cl 1078 (1103)
.....-+........ ....+. ..........++..+.+++.+||
T Consensus 237 ---~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 237 ---MNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLL 313 (388)
T ss_dssp ---HHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHC
T ss_pred ---HHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhh
Confidence 100000000000000 000000 00000011134567899999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 043720 1079 VETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1079 ~~dP~~RPs~~evl~~ 1094 (1103)
+.||++|||++|++++
T Consensus 314 ~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 314 QFNPNKRISANDALKH 329 (388)
T ss_dssp CSSGGGSCCHHHHTTS
T ss_pred ccCcccCCCHHHHhCC
Confidence 9999999999999987
No 186
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.4e-36 Score=352.93 Aligned_cols=253 Identities=21% Similarity=0.265 Sum_probs=193.7
Q ss_pred cCCCCc-ceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHh-cCCCCceeEEEeEEec----CCeE
Q 043720 821 GDFNTS-NCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLG-NVRHPNLVTLIGYRAS----GNEM 893 (1103)
Q Consensus 821 ~~~~~~-~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~-~l~h~niv~l~~~~~~----~~~~ 893 (1103)
++|.+. +.||+|+||+||+|... +++.||||++... ..+.+|+.++. ..+||||+++++++.. .+..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 456665 68999999999999765 5889999998632 34667888774 4589999999998865 5678
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC---CCCEEEeecccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD---DFNAYLSDFGLS 970 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~Dfgla 970 (1103)
|+||||+++|+|.+++.......+++.++..++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999999999876556699999999999999999999999 9999999999999997 788999999999
Q ss_pred cccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
+..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........... . .. .+..+..
T Consensus 212 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~---~~-~i~~~~~ 284 (400)
T 1nxk_A 212 KETTSH--NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-M---KT-RIRMGQY 284 (400)
T ss_dssp EECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS-H---HH-HHHHTCC
T ss_pred cccCCC--CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH-H---HH-HHHcCcc
Confidence 865422 223456789999999999999999999999999999999999999975433221111 1 11 1111111
Q ss_pred cccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 043720 1051 KDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCL 1095 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1095 (1103)
. .........+.++.++|.+||+.||++|||++|++++-
T Consensus 285 ~------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 285 E------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp C------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred c------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0 00011134567899999999999999999999999863
No 187
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-37 Score=346.19 Aligned_cols=266 Identities=24% Similarity=0.421 Sum_probs=212.1
Q ss_pred cCCCCcceeccCCcccEEEEEE-----cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC--eE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-----SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN--EM 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 893 (1103)
++|++.+.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 4688999999999999999974 368999999987643 345678999999999999999999999986644 78
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
++||||+++++|.++++... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 99999999999999998753 3589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-------CCCCCcchHHHHHHH
Q 043720 974 GTSETH--ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFS-------SHGDGFNIISWASML 1044 (1103)
Q Consensus 974 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~-------~~~~~~~~~~~~~~~ 1044 (1103)
...... ......++..|+|||.+.+..++.++||||||+++|||++|..|+..... .............
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 273 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI-- 273 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH--
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH--
Confidence 543322 12334567889999999988899999999999999999999988763210 0000000000000
Q ss_pred HhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1045 LRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
+.+........+..++..+.+++.+||+.||++||+++|+++.|+++++
T Consensus 274 -------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 274 -------ELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp -------HHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111111223345677889999999999999999999999999999864
No 188
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.2e-37 Score=340.01 Aligned_cols=246 Identities=22% Similarity=0.312 Sum_probs=201.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|++.+.||+|+||+||+|... +++.||||++..... ......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 457999999999999999999776 689999999876533 33467788999999999 899999999999999999999
Q ss_pred EeecCCCChHHHHHhhcC--CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC---------------
Q 043720 897 YNYLPGGNLENFIKARTS--RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD--------------- 959 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~--------------- 959 (1103)
|||+++++|.++++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999986532 4589999999999999999999999 99999999999999844
Q ss_pred ----CCEEEeecccccccCCCCCccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 043720 960 ----FNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDG 1034 (1103)
Q Consensus 960 ----~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~ 1034 (1103)
..+||+|||.+...... ....|++.|+|||.+.+. .++.++||||||+++|||++|.+++...
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------- 234 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG------- 234 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS-------
T ss_pred cCCceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch-------
Confidence 47999999999876432 223589999999999765 5667999999999999999998765421
Q ss_pred cchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1035 FNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..+. ....+. ....+...+..+.+++.+||+.||++||+++|++++
T Consensus 235 ---~~~~--~~~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 235 ---DQWH--EIRQGR---------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp ---HHHH--HHHTTC---------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ---hHHH--HHHcCC---------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0111 111111 122334556789999999999999999999999875
No 189
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.2e-37 Score=342.78 Aligned_cols=250 Identities=22% Similarity=0.374 Sum_probs=210.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
+.|+..+.||+|+||+||+|... +++.||||++.........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 46889999999999999999654 68999999998776666678899999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++++|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....... .
T Consensus 102 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 174 (303)
T 3a7i_A 102 LGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-I 174 (303)
T ss_dssp CTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-C
T ss_pred CCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc-c
Confidence 9999999999753 489999999999999999999999 99999999999999999999999999998764332 2
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccccc
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELW 1059 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1103)
......|++.|+|||++.+..++.++||||||+++|||++|+.||.... ......... ... .
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~-~~~---------~ 236 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH--------PMKVLFLIP-KNN---------P 236 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHH-HSC---------C
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC--------HHHHHHHhh-cCC---------C
Confidence 3345678999999999999999999999999999999999999986321 111111111 111 1
Q ss_pred CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 043720 1060 ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCL 1095 (1103)
Q Consensus 1060 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 1095 (1103)
...+...+..+.+++.+||+.||++||++.|++++.
T Consensus 237 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 237 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 112334567799999999999999999999998764
No 190
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.1e-37 Score=343.32 Aligned_cols=263 Identities=24% Similarity=0.361 Sum_probs=188.7
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 568999999999999999999654 6889999999776555566788999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhh------cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 899 YLPGGNLENFIKAR------TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
|+++++|.++++.. ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 99999999999752 234589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC----ccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc
Q 043720 973 LGTSET----HATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ 1047 (1103)
Q Consensus 973 ~~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1103)
...... .......|++.|+|||++.+ ..++.++||||||+++|||++|+.||...... . .......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~---~~~~~~~- 241 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM-----K---VLMLTLQ- 241 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG-----G---HHHHHHT-
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh-----h---HHHHHhc-
Confidence 643221 12234578999999999876 56899999999999999999999999743211 1 1111111
Q ss_pred CcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1048 GQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...................+..+.+++.+||+.||++||+++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp SSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11111100001111223455779999999999999999999999874
No 191
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.1e-36 Score=340.36 Aligned_cols=263 Identities=24% Similarity=0.315 Sum_probs=200.2
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57999999999999999999775 4899999998665443 335678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|+++++|.++++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp CCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 999999999887543 489999999999999999999999 99999999999999999999999999998764322
Q ss_pred ccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHH-----------h
Q 043720 979 HATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLL-----------R 1046 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-----------~ 1046 (1103)
.......|++.|+|||++.+ ..++.++||||+|+++|||++|+.||..... ........... .
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 231 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD-----VDQLYLIRKTLGDLIPRHQQVFS 231 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCHHHHHHHH
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhcccccccccccc
Confidence 22334578999999999875 6789999999999999999999999974321 11111111100 0
Q ss_pred cCcccc---cccccccC---CCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1047 QGQVKD---VFNAELWA---SGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1047 ~~~~~~---~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...... ..++.... ......+..+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000 00000000 0012356678999999999999999999999864
No 192
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.5e-37 Score=342.11 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=208.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEe--cCCeEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRA--SGNEMFL 895 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 895 (1103)
.++|++.+.||+|+||+||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 357899999999999999999765 689999999976543 345677999999999999999999999874 4678999
Q ss_pred EEeecCCCChHHHHHhhc--CCcccHHHHHHHHHHHHHHHHHHHhCCCCC-----cccCCCCCCcEEECCCCCEEEeecc
Q 043720 896 IYNYLPGGNLENFIKART--SRAVDWKILHKIALDVASALAYLHDQCAPR-----VLHRDVKPSNILLDDDFNAYLSDFG 968 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-----ivH~Dlk~~NIll~~~~~~ki~Dfg 968 (1103)
||||+++++|.+++.... ...+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999997643 24489999999999999999999998 7 9999999999999999999999999
Q ss_pred cccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcC
Q 043720 969 LSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQG 1048 (1103)
Q Consensus 969 la~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1103)
+++....... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.... ....... ...+
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~-i~~~ 231 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--------QKELAGK-IREG 231 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH-HHHT
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--------HHHHHHH-Hhhc
Confidence 9987643221 2233468999999999999899999999999999999999999987321 1111111 1111
Q ss_pred cccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1049 QVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.. ...+...+..+.+++.+||+.||++||+++|+++++..-..
T Consensus 232 ~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 232 KF---------RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp CC---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred cc---------ccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 11 12234566789999999999999999999999998765543
No 193
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.5e-37 Score=344.39 Aligned_cols=262 Identities=22% Similarity=0.274 Sum_probs=198.7
Q ss_pred cCCCCc-ceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTS-NCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~-~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
+.|++. +.||+|+||+||+|... +++.||||++.... ....+.+.+|+.++.++ .||||+++++++.+.+..|+||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 467774 78999999999999754 68999999997653 33467889999999885 7999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC---EEEeecccccccC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN---AYLSDFGLSRLLG 974 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~Dfgla~~~~ 974 (1103)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++....
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 9999999999998754 489999999999999999999999 9999999999999998776 9999999987653
Q ss_pred CCCC------ccccCCcccccccCcccccc-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCc---ch---
Q 043720 975 TSET------HATTGVAGTFGYVAPEYALT-----CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGF---NI--- 1037 (1103)
Q Consensus 975 ~~~~------~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~---~~--- 1037 (1103)
.... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||........... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 245 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence 2211 12224468999999999875 5688999999999999999999999975432211100 00
Q ss_pred HHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1038 ISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1038 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.......+...... +.... ....+..+.+++.+||+.||++|||++|++++
T Consensus 246 ~~~~~~~i~~~~~~--~~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 246 QNMLFESIQEGKYE--FPDKD----WAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHCCCC--CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHhccCcc--cCchh----cccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00011111111100 00000 01345679999999999999999999999975
No 194
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=353.85 Aligned_cols=262 Identities=15% Similarity=0.233 Sum_probs=207.4
Q ss_pred cCCCCcceeccCCcccEEEEEEcC---------CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeE---------
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISP---------GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVT--------- 882 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 882 (1103)
++|++.+.||+|+||+||+|.... ++.||||++... +.+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 579999999999999999997764 789999998754 35778999999999999987
Q ss_pred ------EEeEEec-CCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEE
Q 043720 883 ------LIGYRAS-GNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNIL 955 (1103)
Q Consensus 883 ------l~~~~~~-~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIl 955 (1103)
+++++.. .+..|+||||+ +++|.++++......+++.++..++.|++.||+|||++ +|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6777765 77899999999 99999999876455699999999999999999999999 9999999999999
Q ss_pred ECCCC--CEEEeecccccccCCCCCc------cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 043720 956 LDDDF--NAYLSDFGLSRLLGTSETH------ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPS 1027 (1103)
Q Consensus 956 l~~~~--~~ki~Dfgla~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~ 1027 (1103)
++.++ .+||+|||+++........ ......|++.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 8999999999876433221 123457899999999999999999999999999999999999999743
Q ss_pred CCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1028 FSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1028 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.. ............. . ......+.. ......+..+.+++.+||+.||++||+++++++.|+++.+
T Consensus 272 ~~---~~~~~~~~~~~~~-~-~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 272 LP---NTEDIMKQKQKFV-D-KPGPFVGPC---GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp TT---CHHHHHHHHHHHH-H-SCCCEECTT---SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred Cc---CHHHHHHHHHhcc-C-Chhhhhhhc---cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 21 1111111111111 1 111111111 0112345789999999999999999999999999999864
No 195
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1e-36 Score=336.82 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=204.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|.... +..||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 4579999999999999999997654 678999998765433 46789999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE---CCCCCEEEeecccccccCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL---DDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~Dfgla~~~~~ 975 (1103)
|+++++|.+++.... .+++.++..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~ 161 (277)
T 3f3z_A 87 LCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 161 (277)
T ss_dssp CCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred ccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence 999999999998754 389999999999999999999999 99999999999999 7888999999999987643
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
.. ......|++.|+|||.+.+. ++.++||||+|+++|||++|+.||..... ........ .+... ..
T Consensus 162 ~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~-~~~~~--~~ 227 (277)
T 3f3z_A 162 GK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD--------SEVMLKIR-EGTFT--FP 227 (277)
T ss_dssp TS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHH-HCCCC--CC
T ss_pred cc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHH-hCCCC--CC
Confidence 32 23445789999999998764 89999999999999999999999973221 11111111 11100 00
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... ....+..+.+++.+|++.||++||++.|++++
T Consensus 228 ~~~----~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 228 EKD----WLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred chh----hhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 01345779999999999999999999999863
No 196
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.9e-36 Score=338.01 Aligned_cols=263 Identities=22% Similarity=0.291 Sum_probs=204.2
Q ss_pred HhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEE-ecCCeEEEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYR-ASGNEMFLI 896 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lV 896 (1103)
..++|++.+.||+|+||+||+|.. .+++.||||++...... +.+.+|+.+++.++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 356899999999999999999975 56899999987654332 3577899999999887776665554 677888999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE---CCCCCEEEeeccccccc
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL---DDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~Dfgla~~~ 973 (1103)
|||+ +++|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++..
T Consensus 84 ~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 9999 999999998543 3599999999999999999999999 99999999999999 78899999999999876
Q ss_pred CCCCC------ccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc
Q 043720 974 GTSET------HATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ 1047 (1103)
Q Consensus 974 ~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1103)
..... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||.......... ............
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~ 237 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ-KYERISEKKMST 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS-HHHHHHHHHHHS
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh-hhhhhhcccccc
Confidence 54332 12335678999999999999999999999999999999999999997543322111 111111111000
Q ss_pred CcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1048 GQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
. ... .....+..+.+++.+||+.||++||+++++++.|+++.+
T Consensus 238 ~------~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 238 P------IEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp C------HHH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred h------hhh----hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 0 000 012345789999999999999999999999999998754
No 197
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=348.03 Aligned_cols=251 Identities=14% Similarity=0.140 Sum_probs=204.4
Q ss_pred HhcCCCCcceeccCCcccEEEE------EEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC---CCceeEEEeEEec
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKA------EISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR---HPNLVTLIGYRAS 889 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 889 (1103)
..++|.+.+.||+|+||+||+| ....++.||||++... ...++.+|+.+++.++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 3467999999999999999999 3556899999998754 2456777888887776 9999999999999
Q ss_pred CCeEEEEEeecCCCChHHHHHhh---cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC--------
Q 043720 890 GNEMFLIYNYLPGGNLENFIKAR---TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD-------- 958 (1103)
Q Consensus 890 ~~~~~lV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~-------- 958 (1103)
.+..|+||||+++|+|.++++.. ....+++..++.++.|++.||+|||++ +|+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 99999999999999999999753 235699999999999999999999999 9999999999999998
Q ss_pred ---CCCEEEeecccccccCC-CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 043720 959 ---DFNAYLSDFGLSRLLGT-SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDG 1034 (1103)
Q Consensus 959 ---~~~~ki~Dfgla~~~~~-~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~ 1034 (1103)
++.+||+|||+++.... ..........||++|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--- 292 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--- 292 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence 89999999999976532 22334456689999999999999999999999999999999999999986332210
Q ss_pred cchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCC-CCHHHHHHHHHhhh
Q 043720 1035 FNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTR-PTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~L~~i~ 1099 (1103)
........ .......+.+++..|++.+|.+| |+++++.+.|+++.
T Consensus 293 -----------------~~~~~~~~---~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 293 -----------------CKPEGLFR---RLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp -----------------EEECSCCT---TCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred -----------------eeechhcc---ccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 00011110 11235678899999999999999 57888888888753
No 198
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=9.3e-37 Score=373.89 Aligned_cols=250 Identities=26% Similarity=0.340 Sum_probs=202.8
Q ss_pred ceeccCCcccEEEEEEc---CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEeecCC
Q 043720 827 NCIGSGGFGTTYKAEIS---PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNYLPG 902 (1103)
Q Consensus 827 ~~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~ 902 (1103)
+.||+|+||+||+|.+. .++.||||+++.... ....+++.+|+.++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999553 467899999976543 3346789999999999999999999999965 568999999999
Q ss_pred CChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc--c
Q 043720 903 GNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH--A 980 (1103)
Q Consensus 903 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~--~ 980 (1103)
|+|.++++... .+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........ .
T Consensus 454 g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 99999997643 489999999999999999999999 9999999999999999999999999999877543322 2
Q ss_pred ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccccc
Q 043720 981 TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELW 1059 (1103)
Q Consensus 981 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1059 (1103)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ..... .+.. ...
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~-~i~~---------~~~ 590 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SEVTA-MLEK---------GER 590 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHH-HHHT---------TCC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHH-HHHc---------CCC
Confidence 233456789999999999999999999999999999998 9999873221 11111 1111 122
Q ss_pred CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1060 ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1060 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
...+..++..+.++|.+||+.||++||++++|++.|+++..
T Consensus 591 ~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 591 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 23455677889999999999999999999999999998753
No 199
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=3.7e-35 Score=349.38 Aligned_cols=256 Identities=24% Similarity=0.306 Sum_probs=182.1
Q ss_pred CCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCE
Q 043720 104 GGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEV 183 (1103)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (1103)
..+++|+.|+++++.+. .+| .+..+++|++|||++|.+++..| +..+++|++|+|++|++++..| ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 34678899999999887 466 47888999999999999985544 8899999999999999985444 888999999
Q ss_pred EEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCcc
Q 043720 184 LNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNM 263 (1103)
Q Consensus 184 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 263 (1103)
|++++|.+++..+ ++.+++|++|++++|.++ .++. +. .+++|++|+++ |.+.+.. .++++++|++|++++|.
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~-~~~~-~~-~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~ 188 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-DISA-LS-GLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNK 188 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEEC-CCGG-GT-TCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccC-CChh-hc-cCCcccEeecC-CcccCch--hhccCCCCCEEECcCCc
Confidence 9999999886543 888899999999999888 4553 43 35778888886 4555332 37788888888888888
Q ss_pred CCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccC
Q 043720 264 LNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSI 343 (1103)
Q Consensus 264 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~i 343 (1103)
+++. ..+..+++|+.|++++|.+++..| ++.+++|+.|++++
T Consensus 189 l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~---------------------------------- 230 (466)
T 1o6v_A 189 VSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNG---------------------------------- 230 (466)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCS----------------------------------
T ss_pred CCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCC----------------------------------
Confidence 8764 347778888888888888876544 56666777776664
Q ss_pred chhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccccccc
Q 043720 344 PMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPC 423 (1103)
Q Consensus 344 p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~ 423 (1103)
|.+.+. ..+..+++|+.|++++|.+.+..+ +..+++|+.|++++|++++..+ ...+++
T Consensus 231 -----------------n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~ 288 (466)
T 1o6v_A 231 -----------------NQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTA 288 (466)
T ss_dssp -----------------SCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTT
T ss_pred -----------------CCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCc
Confidence 333321 245566677777777777776554 6677777777777777654322 223333
Q ss_pred eeEEEecCCc
Q 043720 424 MALFDVSGNH 433 (1103)
Q Consensus 424 L~~l~ls~N~ 433 (1103)
|+.|++++|+
T Consensus 289 L~~L~L~~n~ 298 (466)
T 1o6v_A 289 LTNLELNENQ 298 (466)
T ss_dssp CSEEECCSSC
T ss_pred cCeEEcCCCc
Confidence 3334433333
No 200
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=5.5e-37 Score=341.54 Aligned_cols=259 Identities=25% Similarity=0.375 Sum_probs=201.2
Q ss_pred cCCCCcceeccCCcccEEEEEEc--CC--cEEEEEEccccc--chhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS--PG--ILVAVKKLAVGR--FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~--~~--~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
++|++.+.||+|+||+||+|.+. ++ ..||||++.... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 47999999999999999999753 23 368999987653 2345678999999999999999999999998765 88
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccC
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~ 974 (1103)
+|+||+++++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 9999999999999998753 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc--cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccc
Q 043720 975 TSETH--ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVK 1051 (1103)
Q Consensus 975 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1103)
..... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ............
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~--- 241 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--------GSQILHKIDKEG--- 241 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTSC---
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC--------HHHHHHHHHccC---
Confidence 43322 2234457889999999988888999999999999999999 999986321 112222221111
Q ss_pred ccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1052 DVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
.....+...+..+.+++.+||+.||++||+++++++.|+++.+.
T Consensus 242 ------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 242 ------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 11223445678899999999999999999999999999998764
No 201
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.3e-36 Score=335.15 Aligned_cols=257 Identities=24% Similarity=0.350 Sum_probs=206.2
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch-----hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-----HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46889999999999999999776 6899999998765432 23678999999999999999999999999999999
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC----CEEEeecccc
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF----NAYLSDFGLS 970 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~ki~Dfgla 970 (1103)
+||||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999997654 489999999999999999999999 999999999999998877 7999999999
Q ss_pred cccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
....... ......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ........ ....
T Consensus 160 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~-~~~~ 228 (283)
T 3bhy_A 160 HKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK--------QETLTNIS-AVNY 228 (283)
T ss_dssp EECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHH-TTCC
T ss_pred eeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch--------HHHHHHhH-hccc
Confidence 8764322 22345689999999999999999999999999999999999999873211 11111111 1100
Q ss_pred cccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhhh
Q 043720 1051 KDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC--LKQIQ 1099 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~ 1099 (1103)
...... ....+..+.+++.+||+.||++||+++|++++ +++++
T Consensus 229 --~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 229 --DFDEEY----FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp --CCCHHH----HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred --CCcchh----cccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 001111 12345678999999999999999999999973 44443
No 202
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.2e-35 Score=351.34 Aligned_cols=356 Identities=24% Similarity=0.356 Sum_probs=249.0
Q ss_pred CCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCC
Q 043720 117 NGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIP 196 (1103)
Q Consensus 117 n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 196 (1103)
+.+.+.++. ..+++|+.|++++|.+. .+|. +..+++|++|+|++|.+++. |. +.++++|++|++++|++++..+
T Consensus 34 ~~~~~~i~~--~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~ 107 (466)
T 1o6v_A 34 TNVTDTVSQ--TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP 107 (466)
T ss_dssp SSTTSEECH--HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred cccccccCh--hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh
Confidence 344444442 34678999999999998 5664 88899999999999999854 44 8999999999999999996655
Q ss_pred hhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCC
Q 043720 197 GFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLR 276 (1103)
Q Consensus 197 ~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 276 (1103)
++++++|++|++++|+++ .++. +. .+++|++|++++|.+++ ++ .++.+++|++|+++ |.+.+..+ +..++
T Consensus 108 --~~~l~~L~~L~L~~n~l~-~~~~-~~-~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~ 177 (466)
T 1o6v_A 108 --LANLTNLTGLTLFNNQIT-DIDP-LK-NLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLT 177 (466)
T ss_dssp --GTTCTTCCEEECCSSCCC-CCGG-GT-TCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCT
T ss_pred --hcCCCCCCEEECCCCCCC-CChH-Hc-CCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCC
Confidence 889999999999999988 4554 43 45788899998888875 33 47888888888886 55555332 77888
Q ss_pred CCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhcccccccc
Q 043720 277 KLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRII 356 (1103)
Q Consensus 277 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L 356 (1103)
+|+.|++++|++++. ..+..+++|+.|++
T Consensus 178 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l------------------------------------------------- 206 (466)
T 1o6v_A 178 TLERLDISSNKVSDI--SVLAKLTNLESLIA------------------------------------------------- 206 (466)
T ss_dssp TCCEEECCSSCCCCC--GGGGGCTTCSEEEC-------------------------------------------------
T ss_pred CCCEEECcCCcCCCC--hhhccCCCCCEEEe-------------------------------------------------
Confidence 888888888887643 23455555555555
Q ss_pred ccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccccccceeEEEecCCcccc
Q 043720 357 WAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMSG 436 (1103)
Q Consensus 357 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~g 436 (1103)
++|.+.+..| ++.+++|+.|+|++|++++. +.+..+++|+.|++++|++++..+ ...+++|+.|++++|++++
T Consensus 207 --~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~ 279 (466)
T 1o6v_A 207 --TNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISN 279 (466)
T ss_dssp --CSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCC
T ss_pred --cCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCc
Confidence 4555555444 67789999999999999975 468899999999999999876543 4445555555555554442
Q ss_pred ccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCccccccccCCCCcccccccc
Q 043720 437 SIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRT 516 (1103)
Q Consensus 437 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~ 516 (1103)
.
T Consensus 280 ~------------------------------------------------------------------------------- 280 (466)
T 1o6v_A 280 I------------------------------------------------------------------------------- 280 (466)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred ceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEE
Q 043720 517 DYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFL 596 (1103)
Q Consensus 517 ~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 596 (1103)
|. +. .+++|++|+|++|++++..+ +..+++|+.|
T Consensus 281 ------------------------------------------~~-~~-~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 314 (466)
T 1o6v_A 281 ------------------------------------------SP-LA-GLTALTNLELNENQLEDISP--ISNLKNLTYL 314 (466)
T ss_dssp ------------------------------------------GG-GT-TCTTCSEEECCSSCCSCCGG--GGGCTTCSEE
T ss_pred ------------------------------------------cc-cc-CCCccCeEEcCCCcccCchh--hcCCCCCCEE
Confidence 11 11 12556666666666665433 5666666667
Q ss_pred EccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCc
Q 043720 597 DLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLS 676 (1103)
Q Consensus 597 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 676 (1103)
+|++|++++..| +..+++|+.|++++|++++. ..+..+++|++|++++|++++..| +..+++|+.|++++|+++
T Consensus 315 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 315 TLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp ECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred ECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 776666665433 56666666666666666643 356666667777777776665554 566666666666666666
Q ss_pred C
Q 043720 677 G 677 (1103)
Q Consensus 677 ~ 677 (1103)
+
T Consensus 389 ~ 389 (466)
T 1o6v_A 389 N 389 (466)
T ss_dssp C
T ss_pred C
Confidence 4
No 203
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.3e-36 Score=346.20 Aligned_cols=267 Identities=23% Similarity=0.350 Sum_probs=206.4
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
++|++.+.||+|+||+||+|... +++.||+|++.........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56899999999999999999766 68999999998776666678899999999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
+++++|.++++... .+++..+..++.+++.|++|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--- 185 (360)
T ss_dssp CTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---
T ss_pred CCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999999998754 3899999999999999999999831 7999999999999999999999999998755321
Q ss_pred cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC----------CCc-----------chH
Q 043720 980 ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHG----------DGF-----------NII 1038 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~----------~~~-----------~~~ 1038 (1103)
......|++.|+|||++.+..++.++||||||+++|||++|+.||........ ... ...
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (360)
T 3eqc_A 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265 (360)
T ss_dssp C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC----------------------
T ss_pred cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccc
Confidence 22345789999999999999999999999999999999999999974321000 000 000
Q ss_pred HHHHHHHhcCccccccc----ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1039 SWASMLLRQGQVKDVFN----AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1039 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.+...........+..+ ...........+..+.+++.+||+.||++|||++|++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 266 KFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp --------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000000000000 000011122346679999999999999999999999864
No 204
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=348.10 Aligned_cols=263 Identities=21% Similarity=0.319 Sum_probs=196.9
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
++|++.+.||+|+||+||+|... +++.||||++...........+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999776 68999999997654433333456799999999999999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCc
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETH 979 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~ 979 (1103)
++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-~~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP-TK 155 (324)
T ss_dssp CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC-cc
Confidence 96 59999987653 4589999999999999999999999 9999999999999999999999999999865432 22
Q ss_pred cccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc---cccccc
Q 043720 980 ATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ---VKDVFN 1055 (1103)
Q Consensus 980 ~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 1055 (1103)
......||+.|+|||++.+ ..++.++||||+|+++|||++|+.||..... ............... ......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~ 230 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV-----EEQLHFIFRILGTPTEETWPGILS 230 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCChHhchhhhc
Confidence 2334578999999999876 5689999999999999999999999974321 111111111111000 000000
Q ss_pred c---------cc----cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1056 A---------EL----WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1056 ~---------~~----~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. .. ........+..+.+++.+|++.||++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred chhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 00 000112345678999999999999999999999873
No 205
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.3e-37 Score=347.78 Aligned_cols=255 Identities=20% Similarity=0.302 Sum_probs=190.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CCceeEEEeEEe--------c
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HPNLVTLIGYRA--------S 889 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~--------~ 889 (1103)
..+|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.+++++. ||||+++++++. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 347899999999999999999764 68999999986543 335677899999999996 999999999983 3
Q ss_pred CCeEEEEEeecCCCChHHHHHhhc-CCcccHHHHHHHHHHHHHHHHHHHhCCCCC--cccCCCCCCcEEECCCCCEEEee
Q 043720 890 GNEMFLIYNYLPGGNLENFIKART-SRAVDWKILHKIALDVASALAYLHDQCAPR--VLHRDVKPSNILLDDDFNAYLSD 966 (1103)
Q Consensus 890 ~~~~~lV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~ki~D 966 (1103)
...+++||||+. |+|.++++... ...+++.+++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEec
Confidence 446899999995 79999987632 34599999999999999999999999 8 99999999999999999999999
Q ss_pred cccccccCCCCCc-----------cccCCcccccccCcccc---ccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 043720 967 FGLSRLLGTSETH-----------ATTGVAGTFGYVAPEYA---LTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHG 1032 (1103)
Q Consensus 967 fgla~~~~~~~~~-----------~~~~~~g~~~y~aPE~~---~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~ 1032 (1103)
||+++........ ......|++.|+|||++ .+..++.++||||||+++|||++|+.||......
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-- 259 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-- 259 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH--
Confidence 9999876433221 11244689999999998 5667888999999999999999999998632110
Q ss_pred CCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1033 DGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
...............+..+.+++.+||+.||++||+++|++++|+++.+
T Consensus 260 -------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 260 -------------------RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -------------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------------------HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0111111112223334558899999999999999999999999999864
No 206
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=8.5e-37 Score=345.16 Aligned_cols=251 Identities=24% Similarity=0.305 Sum_probs=181.5
Q ss_pred cceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CCceeEEEeEEecCCeEEEEEeecCCC
Q 043720 826 SNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HPNLVTLIGYRASGNEMFLIYNYLPGG 903 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~g 903 (1103)
.+.||+|+||+||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+.+..|+||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999765 5899999998643 3466788999999997 999999999999999999999999999
Q ss_pred ChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC---CEEEeecccccccCCCCCcc
Q 043720 904 NLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF---NAYLSDFGLSRLLGTSETHA 980 (1103)
Q Consensus 904 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~Dfgla~~~~~~~~~~ 980 (1103)
+|.++++... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++..... ...
T Consensus 92 ~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-~~~ 165 (325)
T 3kn6_A 92 ELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD-NQP 165 (325)
T ss_dssp BHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC-CCc
Confidence 9999998753 499999999999999999999999 999999999999998765 7999999999865432 223
Q ss_pred ccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccC
Q 043720 981 TTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWA 1060 (1103)
Q Consensus 981 ~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1060 (1103)
.....||+.|+|||++.+..++.++||||+|+++|||++|+.||......... ......... +..+... +....
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~-i~~~~~~--~~~~~-- 239 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKK-IKKGDFS--FEGEA-- 239 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHH-HTTTCCC--CCSHH--
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHH-HHcCCCC--CCccc--
Confidence 34557899999999999999999999999999999999999999754321111 111111111 1111110 00000
Q ss_pred CCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1061 SGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1061 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....+.++.+++.+||+.||++||+++|++++
T Consensus 240 --~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 240 --WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp --HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred --ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 12346789999999999999999999998754
No 207
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.5e-36 Score=333.75 Aligned_cols=247 Identities=23% Similarity=0.357 Sum_probs=206.9
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56999999999999999999765 578899999865432 223567899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 9999999999998754 389999999999999999999999 9999999999999999999999999998765322
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......... .
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--------~~~~~~~~~-~--------- 227 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH--------TETHRRIVN-V--------- 227 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHT-T---------
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH--------hHHHHHHhc-c---------
Confidence 23345789999999999999999999999999999999999999973211 111111111 1
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....+...+..+.+++.+|++.||++||+++|++++
T Consensus 228 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 228 -DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 012234456789999999999999999999999864
No 208
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.7e-36 Score=336.91 Aligned_cols=262 Identities=22% Similarity=0.298 Sum_probs=207.7
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeE-EecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGY-RASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++...... +.+.+|+.+++.++|++++..+++ ....+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 46799999999999999999976 57899999998765433 458899999999998776665554 46677889999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC---CCCCEEEeecccccccC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD---DDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~ki~Dfgla~~~~ 974 (1103)
||+ +++|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||++....
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Eec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 999 899999997543 4599999999999999999999999 999999999999994 88899999999998765
Q ss_pred CCCCc------cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcC
Q 043720 975 TSETH------ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQG 1048 (1103)
Q Consensus 975 ~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1103)
..... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......... ..............
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~ 238 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMSTP 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHSC
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh-hhhhhhcccccCCc
Confidence 43321 234567899999999999999999999999999999999999999754322111 11111111111000
Q ss_pred cccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1049 QVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
... .....+..+.+++.+||+.||++||+++++++.|+++..
T Consensus 239 ------~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 239 ------IEV----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp ------HHH----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred ------hHH----HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 000 013345779999999999999999999999999998754
No 209
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.1e-36 Score=330.99 Aligned_cols=249 Identities=27% Similarity=0.428 Sum_probs=199.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|.+.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 357999999999999999999776 689999999875432 23456789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999998754 389999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
. ......+++.|+|||.+.+..+ +.++||||||+++|||++|+.||.... ........ ....
T Consensus 165 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~-~~~~------ 227 (276)
T 2h6d_A 165 E--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--------VPTLFKKI-RGGV------ 227 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHH-HHCC------
T ss_pred c--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHHHHHHh-hcCc------
Confidence 2 2234568999999999987765 579999999999999999999987321 11111111 1111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+..+.+++.+|++.||++||+++|++++
T Consensus 228 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 ----FYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----ccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11233456779999999999999999999999985
No 210
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.7e-36 Score=335.44 Aligned_cols=250 Identities=21% Similarity=0.311 Sum_probs=208.6
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|.+.+.||+|+||+||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357889999999999999999766 478899999876532 34567789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++++|.++++... .+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999987654 489999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
. .......|++.|+|||.+.+..++.++||||+|+++|||++|+.||..... ........ ...
T Consensus 169 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--------~~~~~~~~-~~~------- 231 (294)
T 2rku_A 169 G-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL--------KETYLRIK-KNE------- 231 (294)
T ss_dssp T-CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHH-TTC-------
T ss_pred c-cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHh-hcc-------
Confidence 2 223445789999999999998899999999999999999999999973211 11111111 111
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++||+++|++++
T Consensus 232 ---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 ---YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 12233456779999999999999999999999875
No 211
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-36 Score=345.81 Aligned_cols=252 Identities=22% Similarity=0.290 Sum_probs=202.2
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|... +++.||||++...... ..+|++++.++ +||||+++++++.+++..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 457999999999999999999765 5889999999765322 34678888887 7999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC----CCEEEeeccccccc
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD----FNAYLSDFGLSRLL 973 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~ki~Dfgla~~~ 973 (1103)
||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||++.++ +.+||+|||++...
T Consensus 96 E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999997653 489999999999999999999999 99999999999998543 34999999999876
Q ss_pred CCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 974 GTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 974 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... .+...
T Consensus 171 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~~~~i~-~~~~~-- 241 (342)
T 2qr7_A 171 RAEN-GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-----DTPEEILARIG-SGKFS-- 241 (342)
T ss_dssp BCTT-CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-----SCHHHHHHHHH-HCCCC--
T ss_pred cCCC-CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-----CCHHHHHHHHc-cCCcc--
Confidence 4332 233456789999999999888889999999999999999999999974321 11122222221 11110
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.........+..+.+++.+||+.||++||+++|++++
T Consensus 242 ----~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 ----LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp ----CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred ----cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111223456789999999999999999999999875
No 212
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.4e-36 Score=333.85 Aligned_cols=262 Identities=26% Similarity=0.398 Sum_probs=203.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999765 6899999998765432 234678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|++ ++|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 6999999877656689999999999999999999999 99999999999999999999999999998764322
Q ss_pred ccccCCcccccccCccccccCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc-
Q 043720 979 HATTGVAGTFGYVAPEYALTCR-VSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA- 1056 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 1056 (1103)
.......+++.|+|||.+.+.. ++.++||||||+++|||++|+.||..... ...........+......-+
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 158 RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-------IDQLFRIFRTLGTPDEVVWPG 230 (299)
T ss_dssp BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-------HHHHHHHHHHHCCCCTTTSTT
T ss_pred cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccH-------HHHHHHHHHHhCCCchhhhhH
Confidence 2233456899999999998765 78999999999999999999999974321 11111111111110000000
Q ss_pred -----cccCC-----------CChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 -----ELWAS-----------GPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 -----~~~~~-----------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..... .....+.++.+++.+|++.||++||+++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 012345778999999999999999999999973
No 213
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.5e-36 Score=342.02 Aligned_cols=250 Identities=21% Similarity=0.319 Sum_probs=208.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
.++|.+.+.||+|+||+||+|... +++.||+|++..... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357889999999999999999765 478899999876532 34567789999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++++|.++++... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999988654 489999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 977 ETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
. .......|++.|+|||++.+..++.++||||||+++|||++|+.||.... .......... ..
T Consensus 195 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~-~~------- 257 (335)
T 2owb_A 195 G-ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKK-NE------- 257 (335)
T ss_dssp T-CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHH-TC-------
T ss_pred c-ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHhc-CC-------
Confidence 2 22344578999999999999889999999999999999999999997321 1111111111 11
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++||+++|++++
T Consensus 258 ---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 ---YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11233455778999999999999999999999874
No 214
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.2e-35 Score=330.54 Aligned_cols=248 Identities=23% Similarity=0.368 Sum_probs=200.0
Q ss_pred CCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEec----CCeEEE
Q 043720 822 DFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS----GNEMFL 895 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l 895 (1103)
.|.+.+.||+|+||+||+|... ++..||+|++..... ....+.+.+|+.++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4777889999999999999664 578899999876543 3456789999999999999999999998865 456899
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCC--cccCCCCCCcEEEC-CCCCEEEeecccccc
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPR--VLHRDVKPSNILLD-DDFNAYLSDFGLSRL 972 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivH~Dlk~~NIll~-~~~~~ki~Dfgla~~ 972 (1103)
||||+++++|.++++... .+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999998754 389999999999999999999999 7 99999999999998 788999999999975
Q ss_pred cCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccc
Q 043720 973 LGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKD 1052 (1103)
Q Consensus 973 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1103)
.... ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||..... ......... .+...
T Consensus 182 ~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-------~~~~~~~~~-~~~~~- 248 (290)
T 1t4h_A 182 KRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-------AAQIYRRVT-SGVKP- 248 (290)
T ss_dssp CCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-------HHHHHHHHT-TTCCC-
T ss_pred cccc---ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-------HHHHHHHHh-ccCCc-
Confidence 4322 2334568999999998864 589999999999999999999999963221 111211111 11100
Q ss_pred cccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1053 VFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 249 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 249 -------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01122334679999999999999999999999874
No 215
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.4e-36 Score=344.45 Aligned_cols=261 Identities=21% Similarity=0.311 Sum_probs=194.5
Q ss_pred HhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
..++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4568999999999999999999654 6899999999765433 2345678999999999999999999999999999999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE-----CCCCCEEEeeccccc
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL-----DDDFNAYLSDFGLSR 971 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll-----~~~~~~ki~Dfgla~ 971 (1103)
|||++ |+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+||++ ++++.+||+|||+++
T Consensus 112 ~e~~~-~~L~~~~~~~~~--~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNPD--VSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCS-EEHHHHHHHCTT--CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCC-CCHHHHHhhcCC--CCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99997 599999987543 89999999999999999999999 99999999999999 455569999999998
Q ss_pred ccCCCCCccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc-Cc
Q 043720 972 LLGTSETHATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ-GQ 1049 (1103)
Q Consensus 972 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1049 (1103)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... .......... +.
T Consensus 186 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~~~~~~~~~~~ 256 (329)
T 3gbz_A 186 AFGIPI-RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE--------IDQLFKIFEVLGL 256 (329)
T ss_dssp HHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHHHCC
T ss_pred ccCCcc-cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH--------HHHHHHHHHHhCC
Confidence 764332 223445679999999999874 489999999999999999999999973221 1111111110 00
Q ss_pred ccc-----cc-------------cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1050 VKD-----VF-------------NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1050 ~~~-----~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... .. ............+..+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000 00 0000000011245778999999999999999999999873
No 216
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-36 Score=344.37 Aligned_cols=256 Identities=23% Similarity=0.370 Sum_probs=197.3
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC------
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN------ 891 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 891 (1103)
.++|++.+.||+|+||+||+|.. .+|+.||||++..... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35799999999999999999976 4689999999865432 334577899999999999999999999997653
Q ss_pred eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 892 EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 892 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
.+|+||||+ +++|.++++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 569999999 88999999863 389999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHh-cCc
Q 043720 972 LLGTSETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLR-QGQ 1049 (1103)
Q Consensus 972 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1049 (1103)
.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ......+.. .+.
T Consensus 177 ~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--------~~~l~~i~~~~g~ 244 (367)
T 1cm8_A 177 QADS----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--------LDQLKEIMKVTGT 244 (367)
T ss_dssp ECCS----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHHHCC
T ss_pred cccc----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHhcCC
Confidence 7542 2345678999999999877 6799999999999999999999999974321 111111110 000
Q ss_pred cc-cc------------------ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1050 VK-DV------------------FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1050 ~~-~~------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.. +. .............+..+.+++.+|++.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00 00 00000111223456789999999999999999999999975
No 217
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=4.8e-36 Score=356.25 Aligned_cols=194 Identities=24% Similarity=0.400 Sum_probs=155.3
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEec-----CCeE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS-----GNEM 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~~~ 893 (1103)
++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57999999999999999999655 689999999865432 3356788999999999999999999999843 3579
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
|+||||+ +++|.++++.. ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 9999998 57999999764 3499999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC--------------------------ccccCCcccccccCcccc-ccCCCCCcchhHHHHHHHHHHHhC
Q 043720 974 GTSET--------------------------HATTGVAGTFGYVAPEYA-LTCRVSDKADVYSYGVVLLELISD 1020 (1103)
Q Consensus 974 ~~~~~--------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwslGvil~elltg 1020 (1103)
..... ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 43221 123456789999999976 566799999999999999999994
No 218
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.7e-36 Score=372.93 Aligned_cols=259 Identities=25% Similarity=0.366 Sum_probs=210.6
Q ss_pred HhcCCCCcceeccCCcccEEEEEEcC----CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEISP----GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 894 (1103)
..++|++.+.||+|+||+||+|.+.. +..||||++.........+.+.+|+.++++++||||+++++++.+ +..|
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 34678899999999999999997643 567999998876666667889999999999999999999999854 5689
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccC
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~ 974 (1103)
+||||+++|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 467 lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 9999999999999998653 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
...........+++.|+|||++.+..++.++||||||+++|||++ |..||..... ..........
T Consensus 543 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--------~~~~~~i~~~------ 608 (656)
T 2j0j_A 543 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------NDVIGRIENG------ 608 (656)
T ss_dssp C----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHHT------
T ss_pred CCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHcC------
Confidence 444434444567889999999998899999999999999999997 8888863211 1111111111
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhc
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQH 1100 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 1100 (1103)
.....+..++..+.+++.+||+.||++||++.|+++.|+++..
T Consensus 609 ----~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 609 ----ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ----CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1122345667889999999999999999999999999998853
No 219
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3e-36 Score=356.58 Aligned_cols=258 Identities=24% Similarity=0.339 Sum_probs=195.8
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEccccc-chhhHHHHHHHHHHHhcCCCCceeEEEeEEecC------C
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGR-FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG------N 891 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 891 (1103)
.++|++.+.||+|+||+||+|... +++.||||++.... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999654 58999999997653 234467788999999999999999999998654 4
Q ss_pred eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 892 EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 892 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 67999999965 57776643 388999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc--
Q 043720 972 LLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ-- 1049 (1103)
Q Consensus 972 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 1049 (1103)
..... ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ..++.......+.
T Consensus 213 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-------~~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 213 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-------IDQWNKVIEQLGTPC 283 (464)
T ss_dssp ----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHHHHCSCC
T ss_pred ecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHhcCCCC
Confidence 76432 234456899999999999999999999999999999999999999974321 1111111100000
Q ss_pred --------------------cc-----ccccccccCCC---ChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1050 --------------------VK-----DVFNAELWASG---PHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1050 --------------------~~-----~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.. ..+........ .......+.+++.+||+.||++|||++|++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000000000 01125678999999999999999999999875
No 220
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.6e-36 Score=341.93 Aligned_cols=264 Identities=20% Similarity=0.261 Sum_probs=210.4
Q ss_pred CCHHHHHHHhcCCCCc-ceeccCCcccEEEEEEc-CCcEEEEEEcccccch-hhHHHHHHHHHHHhcCC-CCceeEEEeE
Q 043720 811 LTYESIIRATGDFNTS-NCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVR-HPNLVTLIGY 886 (1103)
Q Consensus 811 ~~~~~~~~~~~~~~~~-~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~ 886 (1103)
..++..+...++|.+. +.||+|+||+||+|... +++.||||++...... .....+.+|+.+++.+. ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3444555566778877 88999999999999765 5899999999765432 34678899999999994 6999999999
Q ss_pred EecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC---CCCEE
Q 043720 887 RASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD---DFNAY 963 (1103)
Q Consensus 887 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~k 963 (1103)
+...+..++||||+++|+|.+++.......+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999998765556799999999999999999999999 9999999999999998 78999
Q ss_pred EeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH
Q 043720 964 LSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 964 i~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
|+|||+++...... ......|++.|+|||++.+..++.++||||||+++|||++|+.||..... ......
T Consensus 175 L~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~ 244 (327)
T 3lm5_A 175 IVDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN--------QETYLN 244 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EeeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--------hHHHHH
Confidence 99999998764322 23345789999999999999999999999999999999999999963211 111111
Q ss_pred HHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1044 LLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..... ...........+..+.+++.+||+.||++||+++|++++
T Consensus 245 i~~~~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 245 ISQVN-------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHTC-------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHhcc-------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 11110 011112233556789999999999999999999999875
No 221
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.7e-36 Score=352.76 Aligned_cols=200 Identities=23% Similarity=0.365 Sum_probs=168.7
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecC-----Ce
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG-----NE 892 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~ 892 (1103)
.++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 457999999999999999999665 588999999975432 33567889999999999999999999998765 57
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.|+||||++ ++|.++++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 999999995 6999999764 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC---------------------ccccCCcccccccCcccc-ccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 043720 973 LGTSET---------------------HATTGVAGTFGYVAPEYA-LTCRVSDKADVYSYGVVLLELISDKKALD 1025 (1103)
Q Consensus 973 ~~~~~~---------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwslGvil~elltg~~p~~ 1025 (1103)
...... ......+||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 643321 123566899999999986 56679999999999999999998766654
No 222
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.7e-36 Score=342.50 Aligned_cols=265 Identities=21% Similarity=0.337 Sum_probs=201.3
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357999999999999999999765 4899999998665433 34566889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999999988876543 489999999999999999999999 99999999999999999999999999998654322
Q ss_pred CccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHH-----------HHHH
Q 043720 978 THATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWA-----------SMLL 1045 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~-----------~~~~ 1045 (1103)
.......|++.|+|||++.+. .++.++||||+|+++|||++|+.||...... ....... ....
T Consensus 179 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 253 (331)
T 4aaa_A 179 -EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI----DQLYHIMMCLGNLIPRHQELFN 253 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHHHCSCCHHHHHHHH
T ss_pred -cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHHHhCCCChhhhhHhh
Confidence 223345789999999998775 7899999999999999999999998743210 0000000 0000
Q ss_pred hcCcccccccccccCC-----CChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1046 RQGQVKDVFNAELWAS-----GPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1046 ~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..........+..... .....+..+.+++.+||+.||++||+++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 254 KNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0111111111111111 112456789999999999999999999999864
No 223
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.7e-37 Score=356.10 Aligned_cols=242 Identities=15% Similarity=0.181 Sum_probs=193.0
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEccccc--chhhHHHHHHHH---HHHhcCCCCceeEEE-------eE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGR--FQHGVQQFHAEI---KTLGNVRHPNLVTLI-------GY 886 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 886 (1103)
.++|++.+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+ ..+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35688899999999999999975 568999999997542 233567899999 555666899999998 66
Q ss_pred EecCC-----------------eEEEEEeecCCCChHHHHHhhcC-----CcccHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 043720 887 RASGN-----------------EMFLIYNYLPGGNLENFIKARTS-----RAVDWKILHKIALDVASALAYLHDQCAPRV 944 (1103)
Q Consensus 887 ~~~~~-----------------~~~lV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~i 944 (1103)
+...+ ..|+||||+ +|+|.++++.... ..+++..+..|+.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 66553 289999999 6899999986432 2244688899999999999999999 99
Q ss_pred ccCCCCCCcEEECCCCCEEEeecccccccCCCCCccccCCcccccccCccccccC-----------CCCCcchhHHHHHH
Q 043720 945 LHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTC-----------RVSDKADVYSYGVV 1013 (1103)
Q Consensus 945 vH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~sDvwslGvi 1013 (1103)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999986432 3345567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 043720 1014 LLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQ 1093 (1103)
Q Consensus 1014 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1093 (1103)
+|||++|+.||....... ...... ......+..+.+++.+||+.||++||++.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~-----------------~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALG-----------------GSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------C-----------------CSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCccccccc-----------------chhhhh------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999996432211 001111 111344578999999999999999999999986
No 224
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.5e-36 Score=334.64 Aligned_cols=251 Identities=25% Similarity=0.332 Sum_probs=204.1
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|.+.+.||+|+||+||+|... +++.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF-RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 357899999999999999999765 6899999999754332 34678899999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE---CCCCCEEEeecccccccCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL---DDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~Dfgla~~~~~ 975 (1103)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 87 LVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred cCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999999997654 489999999999999999999999 99999999999999 7888999999999875432
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
. ......|++.|+|||++.+..++.++||||+|+++|||++|+.||.... ......... .+..
T Consensus 162 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~-~~~~----- 224 (304)
T 2jam_A 162 G---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--------ESKLFEKIK-EGYY----- 224 (304)
T ss_dssp B---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHH-HCCC-----
T ss_pred C---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-cCCC-----
Confidence 2 2233468999999999999999999999999999999999999987321 111112111 1111
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..........+..+.+++.+|++.||++||+++|++++
T Consensus 225 -~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 225 -EFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -CCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -CCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 01111223456789999999999999999999999874
No 225
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.1e-36 Score=349.01 Aligned_cols=253 Identities=11% Similarity=0.069 Sum_probs=185.8
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHH---HHHhcCCCCceeEEE-------eEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEI---KTLGNVRHPNLVTLI-------GYR 887 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~~ 887 (1103)
.+|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+ ..++. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 35888999999999999999765 689999999987653 33456677784 55555 799988855 444
Q ss_pred ecC-----------------CeEEEEEeecCCCChHHHHHhhcCCcccHHHH------HHHHHHHHHHHHHHHhCCCCCc
Q 043720 888 ASG-----------------NEMFLIYNYLPGGNLENFIKARTSRAVDWKIL------HKIALDVASALAYLHDQCAPRV 944 (1103)
Q Consensus 888 ~~~-----------------~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~gL~~LH~~~~~~i 944 (1103)
... ...|+||||++ |+|.++++.... .+++..+ ..++.||+.||+|||++ +|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 332 34899999998 899999987532 2455556 77889999999999999 99
Q ss_pred ccCCCCCCcEEECCCCCEEEeecccccccCCCCCccccCCcccccccCcccccc--CCCCCcchhHHHHHHHHHHHhCCC
Q 043720 945 LHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALT--CRVSDKADVYSYGVVLLELISDKK 1022 (1103)
Q Consensus 945 vH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslGvil~elltg~~ 1022 (1103)
+||||||+|||++.++.+||+|||+++..... .....+++.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999865422 113456799999999987 789999999999999999999999
Q ss_pred CCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 043720 1023 ALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQ 1093 (1103)
Q Consensus 1023 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1093 (1103)
||............ ....................+..+.+++.+||+.||++||+++|+++
T Consensus 292 Pf~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGSWK----------RPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTCCC----------BCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCcccccchh----------hhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99855332111100 00001111112222223456788999999999999999999999975
No 226
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=345.08 Aligned_cols=257 Identities=23% Similarity=0.379 Sum_probs=201.3
Q ss_pred HHHHHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEec---
Q 043720 815 SIIRATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRAS--- 889 (1103)
Q Consensus 815 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~--- 889 (1103)
++....++|++.+.||+|+||+||+|... +++.||||++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS--TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc--cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 34445678999999999999999999764 689999999875433 346788999999999 79999999999876
Q ss_pred ---CCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEee
Q 043720 890 ---GNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSD 966 (1103)
Q Consensus 890 ---~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 966 (1103)
.+..++||||+++++|.++++......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 46899999999999999999876556689999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCccccCCcccccccCccccc-----cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHH
Q 043720 967 FGLSRLLGTSETHATTGVAGTFGYVAPEYAL-----TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWA 1041 (1103)
Q Consensus 967 fgla~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 1041 (1103)
||++....... .......|++.|+|||++. +..++.++||||||+++|||++|+.||..... ....
T Consensus 173 fg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~ 243 (326)
T 2x7f_A 173 FGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP--------MRAL 243 (326)
T ss_dssp CTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHH
T ss_pred CcCceecCcCc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH--------HHHH
Confidence 99998654322 2233457899999999986 56788999999999999999999999863211 1111
Q ss_pred HHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1042 SMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1042 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....... .. .......+..+.+++.+||+.||++||+++|++++
T Consensus 244 ~~~~~~~-~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 244 FLIPRNP-AP--------RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHSC-CC--------CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHhhcCc-cc--------cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111111 10 11123445789999999999999999999999874
No 227
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.1e-35 Score=341.69 Aligned_cols=257 Identities=28% Similarity=0.397 Sum_probs=207.2
Q ss_pred HHHHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-------hhhHHHHHHHHHHHhcC-CCCceeEEEeE
Q 043720 816 IIRATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-------QHGVQQFHAEIKTLGNV-RHPNLVTLIGY 886 (1103)
Q Consensus 816 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 886 (1103)
.....++|++.+.||+|+||.||+|... +|+.||||++..... ....+.+.+|+.+++++ .||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3445577999999999999999999875 699999999875432 12245688999999999 79999999999
Q ss_pred EecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEee
Q 043720 887 RASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSD 966 (1103)
Q Consensus 887 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~D 966 (1103)
+...+..|+||||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEe
Confidence 999999999999999999999998653 489999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCCCCccccCCcccccccCcccccc------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHH
Q 043720 967 FGLSRLLGTSETHATTGVAGTFGYVAPEYALT------CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISW 1040 (1103)
Q Consensus 967 fgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~ 1040 (1103)
||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ....
T Consensus 244 fG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--------~~~~ 313 (365)
T 2y7j_A 244 FGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR--------QILM 313 (365)
T ss_dssp CTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHH
T ss_pred cCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC--------HHHH
Confidence 99998764332 2345678999999999863 357889999999999999999999996321 1111
Q ss_pred HHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1041 ASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1041 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..... .+... ..... ....+..+.+++.+||+.||++||+++|++++
T Consensus 314 ~~~i~-~~~~~--~~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 314 LRMIM-EGQYQ--FSSPE----WDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHHH-HTCCC--CCHHH----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHH-hCCCC--CCCcc----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11111 11110 00000 01234678999999999999999999999874
No 228
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.1e-35 Score=355.62 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=204.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|... +++.||||++..... ......+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 357999999999999999999765 689999999865432 334678899999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC---CCCCEEEeecccccccC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD---DDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~ki~Dfgla~~~~ 974 (1103)
||+.+|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||+++...
T Consensus 101 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 9999999999987654 489999999999999999999999 999999999999995 45679999999998664
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
.. .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ......... .+... +
T Consensus 176 ~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~-~~~~~--~ 241 (486)
T 3mwu_A 176 QN--TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVE-TGKYA--F 241 (486)
T ss_dssp CC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HTCCC--S
T ss_pred CC--CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-hCCCC--C
Confidence 32 23345679999999999876 58999999999999999999999997321 111222221 11111 0
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
+ .+.....+..+.+++.+||+.||++|||+.|++++
T Consensus 242 ~----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 242 D----LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp C----SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred C----CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 01123456789999999999999999999999985
No 229
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.3e-36 Score=353.80 Aligned_cols=255 Identities=22% Similarity=0.355 Sum_probs=194.0
Q ss_pred HHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-------hhhHHHHHHHHHHHhcCCCCceeEEEeEEec
Q 043720 818 RATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-------QHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS 889 (1103)
Q Consensus 818 ~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 889 (1103)
...++|.+.+.||+|+||+||+|... +++.||||++..... ......+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999655 579999999876432 1123358899999999999999999999754
Q ss_pred CCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC---CEEEee
Q 043720 890 GNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF---NAYLSD 966 (1103)
Q Consensus 890 ~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~ki~D 966 (1103)
+..|+||||+++|+|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 56899999999999999887543 489999999999999999999999 999999999999997544 599999
Q ss_pred cccccccCCCCCccccCCcccccccCcccccc---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH
Q 043720 967 FGLSRLLGTSETHATTGVAGTFGYVAPEYALT---CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 967 fgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ... ..
T Consensus 286 FG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~----~~~----~~ 355 (419)
T 3i6u_A 286 FGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSL----KD 355 (419)
T ss_dssp SSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS----CCH----HH
T ss_pred cccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch----HHH----HH
Confidence 9999876432 23345678999999999853 56788999999999999999999999743221 111 11
Q ss_pred HHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1044 LLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....+.... .+.. ....+..+.+++.+||+.||++||+++|++++
T Consensus 356 ~i~~~~~~~--~~~~----~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 356 QITSGKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp HHHTTCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCC--Cchh----hcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 111111110 0111 12345778999999999999999999999874
No 230
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.6e-35 Score=341.39 Aligned_cols=153 Identities=22% Similarity=0.232 Sum_probs=102.8
Q ss_pred CCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEec
Q 043720 567 KSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLEL 646 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 646 (1103)
++|++|+|++|++++. ..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|++|+|
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 3466666666666643 456666777777777777776666677777777777777777763 4556667778888888
Q ss_pred cCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCC-CCccccccccccCCCCCCCCC
Q 043720 647 SSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFP-WNVTTMNCSGVIGNPFLDPCQ 725 (1103)
Q Consensus 647 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p-~~~~~~~~~~l~~Np~~c~C~ 725 (1103)
++|+++ .+|..+..+++|+.|+|++|+|+.. | +..+++|+.|++++|++..... ..+..+....+.+++..|.|.
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCTT
T ss_pred CCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceeccc
Confidence 888887 4666677788888888888888743 3 5567778888777777754211 123334444567778777765
Q ss_pred C
Q 043720 726 M 726 (1103)
Q Consensus 726 ~ 726 (1103)
.
T Consensus 379 ~ 379 (390)
T 3o6n_A 379 Y 379 (390)
T ss_dssp C
T ss_pred c
Confidence 3
No 231
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=331.46 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=203.8
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc---hhhHHHHHHHHHHHhcCCCCceeEEEeEE--ecCCeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF---QHGVQQFHAEIKTLGNVRHPNLVTLIGYR--ASGNEM 893 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~--~~~~~~ 893 (1103)
.++|++.+.||+|+||.||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999764 588999999976532 23567899999999999999999999998 445688
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
++||||++++ +.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999765 88888876666799999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-CccccCCcccccccCccccccCC--CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 974 GTSE-THATTGVAGTFGYVAPEYALTCR--VSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 974 ~~~~-~~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
.... ........|++.|+|||++.+.. ++.++||||||+++|||++|+.||.... ......... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~-~~~- 229 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYKLFENIG-KGS- 229 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHH-HCC-
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHh-cCC-
Confidence 4322 22234556899999999987644 3779999999999999999999997321 111222111 111
Q ss_pred cccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 KDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+..++..+.+++.+||+.||++||+++|++++
T Consensus 230 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 ---------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 12234556789999999999999999999999975
No 232
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-36 Score=340.22 Aligned_cols=263 Identities=25% Similarity=0.363 Sum_probs=198.2
Q ss_pred HHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchh----hHHHHHHHHHHHhcCCCCceeEEEeEEecCCe
Q 043720 818 RATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQH----GVQQFHAEIKTLGNVRHPNLVTLIGYRASGNE 892 (1103)
Q Consensus 818 ~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 892 (1103)
...++|++.+.||+|+||+||+|... +|+.||||++....... ..+.+.+|+.++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34568999999999999999999765 58999999997643322 12467899999999999999999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.++||||+++ +|.+++.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred eEEEEEcCCC-CHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 9999999975 8999887643 4588899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc-Cc-
Q 043720 973 LGTSETHATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ-GQ- 1049 (1103)
Q Consensus 973 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~- 1049 (1103)
..... .......||+.|+|||++.+. .++.++|||||||++|||++|..||..... .......... +.
T Consensus 162 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~--------~~~~~~i~~~~~~~ 232 (346)
T 1ua2_A 162 FGSPN-RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD--------LDQLTRIFETLGTP 232 (346)
T ss_dssp TTSCC-CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHHHCCC
T ss_pred ccCCc-ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHHHcCCC
Confidence 64322 233456789999999998754 588899999999999999999988863211 1111111110 00
Q ss_pred -cccc---------ccccccCCC-----ChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1050 -VKDV---------FNAELWASG-----PHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1050 -~~~~---------~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.... +........ ....+.++.+++.+|++.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp CTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 000000000 13345789999999999999999999999875
No 233
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=355.16 Aligned_cols=319 Identities=21% Similarity=0.219 Sum_probs=212.1
Q ss_pred cEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccC
Q 043720 206 RVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSR 285 (1103)
Q Consensus 206 ~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 285 (1103)
+.++.++++++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 45667777776 6776543 4577788888887776677777788888888888888777777788888888888888
Q ss_pred CcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccc
Q 043720 286 NRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEG 365 (1103)
Q Consensus 286 N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~ 365 (1103)
|++++..+..|.++++|+.|++++ |.+.+..|..+..+++|+.|++++|.+.+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~---------------------------n~i~~~~~~~~~~l~~L~~L~l~~n~l~~ 142 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISE---------------------------NKIVILLDYMFQDLYNLKSLEVGDNDLVY 142 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTT---------------------------SCCCEECTTTTTTCTTCCEEEECCTTCCE
T ss_pred CcCCccCcccccCCCCCCEEECCC---------------------------CccccCChhHccccccCCEEECCCCccce
Confidence 887766555677777777777764 44444455556666666666666777777
Q ss_pred cCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccc-cccccceeEEEecCCccccccCCCCcc
Q 043720 366 KLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDV-KLQVPCMALFDVSGNHMSGSIPRFDYN 444 (1103)
Q Consensus 366 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~-~~~~~~L~~l~ls~N~l~g~ip~~~~~ 444 (1103)
..+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++++..+. +..+++|+.|++++|++
T Consensus 143 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~---------- 212 (477)
T 2id5_A 143 ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY---------- 212 (477)
T ss_dssp ECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT----------
T ss_pred eChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc----------
Confidence 7777777777777777777777777777777777777777777776643321 22333344444433332
Q ss_pred cccccccccccccccccCCCchhhHHHhhhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccccceeeeecc
Q 043720 445 VCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGA 524 (1103)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1103)
T Consensus 213 -------------------------------------------------------------------------------- 212 (477)
T 2id5_A 213 -------------------------------------------------------------------------------- 212 (477)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCcchhhhcccccccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCC
Q 043720 525 NKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQ 604 (1103)
Q Consensus 525 ~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1103)
.+.+|...... .+|++|+|++|+|+++.+..|..+++|+.|+|++|.++
T Consensus 213 ------------------------------~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 261 (477)
T 2id5_A 213 ------------------------------LDTMTPNCLYG-LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPIS 261 (477)
T ss_dssp ------------------------------CCEECTTTTTT-CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCC
T ss_pred ------------------------------ccccCcccccC-ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCC
Confidence 22333333222 35777777777777555556677777777777777777
Q ss_pred CCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCc
Q 043720 605 GEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLS 676 (1103)
Q Consensus 605 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 676 (1103)
+..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 262 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 262 TIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp EECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred ccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 555566666777777777777777666666666777777777777766555555566666666666666665
No 234
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=9.7e-36 Score=367.42 Aligned_cols=250 Identities=20% Similarity=0.288 Sum_probs=208.7
Q ss_pred HhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEccccc--chhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGR--FQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 894 (1103)
..++|++.+.||+|+||+||+|... +++.||||+++... .....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3568999999999999999999765 57889999997643 233456788899999988 7999999999999999999
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccC
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~ 974 (1103)
+||||+++|+|.++++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999998754 399999999999999999999999 99999999999999999999999999998643
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
.. .......+||+.|+|||++.+..|+.++|||||||++|||++|+.||.... .......+...
T Consensus 494 ~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~------- 557 (674)
T 3pfq_A 494 WD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEH------- 557 (674)
T ss_dssp CT-TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHSS-------
T ss_pred cC-CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhC-------
Confidence 22 233456789999999999999999999999999999999999999997321 11222222211
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTM-----KQVVQ 1093 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 1093 (1103)
. ..++...+.++.++|.+||+.||++||++ +||++
T Consensus 558 --~--~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 558 --N--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --C--CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --C--CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 12345567889999999999999999997 67764
No 235
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=332.01 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=202.6
Q ss_pred HhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
..++|++.+.||+|+||+||+|... +|+.||||++.... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 3567999999999999999999765 48999999987643 3467889999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++++|.++++.. ...+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp ECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred ecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 999999999999753 24589999999999999999999999 99999999999999999999999999998764322
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
.......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ........ ....
T Consensus 180 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~-~~~~------- 242 (314)
T 3com_A 180 -AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP--------MRAIFMIP-TNPP------- 242 (314)
T ss_dssp -SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH--------HHHHHHHH-HSCC-------
T ss_pred -cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHh-cCCC-------
Confidence 233455789999999999998999999999999999999999999873211 11111111 1110
Q ss_pred ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1058 LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1058 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.....+...+..+.+++.+||+.||++||++.+++++
T Consensus 243 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 243 PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp CCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0011233456789999999999999999999999864
No 236
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3.9e-36 Score=342.69 Aligned_cols=254 Identities=25% Similarity=0.350 Sum_probs=202.3
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHH-HhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKT-LGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|.. .+|+.||||++..........++..|... ++.++||||+++++++...+..|+||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45788899999999999999976 46899999999876555455666666665 78889999999999999999999999
Q ss_pred eecCCCChHHHHHhh--cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 898 NYLPGGNLENFIKAR--TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||+++ +|.++++.. ....+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++....
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 99975 999998753 3456999999999999999999999732 899999999999999999999999999987642
Q ss_pred CCCccccCCcccccccCccccc----cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccc
Q 043720 976 SETHATTGVAGTFGYVAPEYAL----TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVK 1051 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1103)
. .......|++.|+|||++. ...++.++|||||||++|||++|+.||..... .............
T Consensus 207 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-------~~~~~~~~~~~~~-- 275 (340)
T 3an0_A 207 S--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-------PFQQLKQVVEEPS-- 275 (340)
T ss_dssp H--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-------HHHHHHHHHHSCC--
T ss_pred c--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-------hHHHHHHHhcCCC--
Confidence 2 2223347899999999964 34788999999999999999999999973211 1111111111111
Q ss_pred ccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1052 DVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
........+..+.+++.+||+.||++||++.|++++
T Consensus 276 -------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 276 -------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp -------CCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -------CCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 011123456789999999999999999999999874
No 237
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.7e-35 Score=338.86 Aligned_cols=264 Identities=22% Similarity=0.304 Sum_probs=200.7
Q ss_pred cCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccch-hhHHHHHHHHHHHhcCCCCceeEEEeEEec--------C
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQ-HGVQQFHAEIKTLGNVRHPNLVTLIGYRAS--------G 890 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------~ 890 (1103)
++|++.+.||+|+||+||+|.. .+++.||||++...... .....+.+|+.+++.++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5799999999999999999977 56899999998665432 234577899999999999999999999877 4
Q ss_pred CeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccc
Q 043720 891 NEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLS 970 (1103)
Q Consensus 891 ~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla 970 (1103)
+..|+||||++ +++.+.+.... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 97 GSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred ceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 56899999996 48888876543 3489999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---CccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHh
Q 043720 971 RLLGTSE---THATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLR 1046 (1103)
Q Consensus 971 ~~~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1103)
+...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ............
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~ 246 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE-----QHQLALISQLCG 246 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHHHhC
Confidence 8764322 223345678999999998876 5589999999999999999999999874321 111111111110
Q ss_pred cCc---cccccccccc------C--CCC-h------hHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1047 QGQ---VKDVFNAELW------A--SGP-H------DDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1047 ~~~---~~~~~~~~~~------~--~~~-~------~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... .......... . ... . .....+.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 247 SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 000 0000000000 0 000 0 013568899999999999999999999875
No 238
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=7.1e-36 Score=357.44 Aligned_cols=251 Identities=24% Similarity=0.351 Sum_probs=206.8
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..|+||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46999999999999999999765 689999999865532 335678999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE---CCCCCEEEeecccccccC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL---DDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~Dfgla~~~~ 974 (1103)
||+.+|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++...
T Consensus 106 e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp CCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred ecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999997654 489999999999999999999999 99999999999999 567899999999998764
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ......... .+....
T Consensus 181 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~-~~~~~~-- 246 (484)
T 3nyv_A 181 ASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN--------EYDILKKVE-KGKYTF-- 246 (484)
T ss_dssp CCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HCCCCC--
T ss_pred ccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHH-cCCCCC--
Confidence 332 2334578999999999876 68999999999999999999999997321 111222221 111110
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. .+.....+..+.+++.+||+.||++|||++|++++
T Consensus 247 ~----~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 E----LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp C----SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred C----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 0 01123456789999999999999999999999864
No 239
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=8.8e-36 Score=332.53 Aligned_cols=252 Identities=21% Similarity=0.342 Sum_probs=200.7
Q ss_pred CCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEeec
Q 043720 822 DFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYNYL 900 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~ 900 (1103)
+|.....||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 456667899999999999975 458899999987653 334677899999999999999999999999999999999999
Q ss_pred CCCChHHHHHhhcC-CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC-CCCEEEeecccccccCCCCC
Q 043720 901 PGGNLENFIKARTS-RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD-DFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 901 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~ki~Dfgla~~~~~~~~ 978 (1103)
++++|.++++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 99999999987533 3467889999999999999999999 9999999999999987 8999999999998764322
Q ss_pred ccccCCcccccccCccccccCC--CCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccc
Q 043720 979 HATTGVAGTFGYVAPEYALTCR--VSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNA 1056 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1056 (1103)
.......|++.|+|||++.+.. ++.++||||||+++|||++|+.||..... .. ........ .
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~-~~~~~~~~-~--------- 241 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE-----PQ-AAMFKVGM-F--------- 241 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS-----HH-HHHHHHHH-H---------
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc-----hh-HHHHhhcc-c---------
Confidence 2233457899999999987643 78899999999999999999999863211 00 00000000 0
Q ss_pred cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1057 ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1057 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
......+...+..+.+++.+||+.||++||+++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 242 KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11122344566789999999999999999999999864
No 240
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.1e-36 Score=345.57 Aligned_cols=259 Identities=21% Similarity=0.316 Sum_probs=197.2
Q ss_pred HHhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEec-------
Q 043720 818 RATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS------- 889 (1103)
Q Consensus 818 ~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------- 889 (1103)
...++|++.+.||+|+||+||+|.. .+++.||||++...... ..+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 4567899999999999999999965 56899999998654322 2379999999999999999998843
Q ss_pred -------------------------------CCeEEEEEeecCCCChHHHHHh--hcCCcccHHHHHHHHHHHHHHHHHH
Q 043720 890 -------------------------------GNEMFLIYNYLPGGNLENFIKA--RTSRAVDWKILHKIALDVASALAYL 936 (1103)
Q Consensus 890 -------------------------------~~~~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~~L 936 (1103)
....++||||++ |+|.+.++. .....+++..+..++.|++.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334899999997 588888764 2335699999999999999999999
Q ss_pred HhCCCCCcccCCCCCCcEEEC-CCCCEEEeecccccccCCCCCccccCCcccccccCccccccC-CCCCcchhHHHHHHH
Q 043720 937 HDQCAPRVLHRDVKPSNILLD-DDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVL 1014 (1103)
Q Consensus 937 H~~~~~~ivH~Dlk~~NIll~-~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil 1014 (1103)
|++ +|+||||||+||+++ .++.+||+|||+++...... ......||+.|+|||++.+. .++.++||||+||++
T Consensus 158 H~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 HSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 999 999999999999997 68899999999998764332 23445789999999998765 489999999999999
Q ss_pred HHHHhCCCCCCCCCCCCCCCcchHHHHHHHH--h----------cCcccc-----cccccccCCCChhHHHHHHHHHHHc
Q 043720 1015 LELISDKKALDPSFSSHGDGFNIISWASMLL--R----------QGQVKD-----VFNAELWASGPHDDLEDMLHLALRC 1077 (1103)
Q Consensus 1015 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~c 1077 (1103)
|||++|+.||..... ......... . .....+ .....+....+...+..+.+++.+|
T Consensus 233 ~ell~g~~pf~~~~~-------~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 305 (383)
T 3eb0_A 233 GELILGKPLFSGETS-------IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQI 305 (383)
T ss_dssp HHHHHSSCSSCCSSH-------HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCCh-------HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHH
Confidence 999999999974321 111111100 0 000000 0011111112344667899999999
Q ss_pred cccCCCCCCCHHHHHHH
Q 043720 1078 TVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1078 l~~dP~~RPs~~evl~~ 1094 (1103)
|+.||++|||+.|++++
T Consensus 306 L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 306 LRYEPDLRINPYEAMAH 322 (383)
T ss_dssp CCSSGGGSCCHHHHHTS
T ss_pred ccCChhhCCCHHHHhcC
Confidence 99999999999999853
No 241
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=8.8e-36 Score=347.60 Aligned_cols=264 Identities=21% Similarity=0.315 Sum_probs=204.9
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC--------CCceeEEEeEEe--
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR--------HPNLVTLIGYRA-- 888 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~-- 888 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 36799999999999999999965 45889999998754 334577889999999985 788999999987
Q ss_pred --cCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC------
Q 043720 889 --SGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF------ 960 (1103)
Q Consensus 889 --~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~------ 960 (1103)
.....++||||+ ++++.+++.......+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhh
Confidence 566899999999 667877777655566999999999999999999999864 899999999999999775
Q ss_pred -------------------------------------------CEEEeecccccccCCCCCccccCCcccccccCccccc
Q 043720 961 -------------------------------------------NAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYAL 997 (1103)
Q Consensus 961 -------------------------------------------~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~ 997 (1103)
.+||+|||+++..... .....||+.|+|||++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhc
Confidence 7999999999876432 33457899999999999
Q ss_pred cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHh-cCc-----------cccccccc--------
Q 043720 998 TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLR-QGQ-----------VKDVFNAE-------- 1057 (1103)
Q Consensus 998 ~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~~~~~~-------- 1057 (1103)
+..++.++|||||||++|||++|+.||......... ........... .+. ....+...
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYT--RDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSC--HHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccC--chHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999754332111 01111111100 000 00000000
Q ss_pred -----------ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1058 -----------LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1058 -----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.....+...+..+.+++.+||+.||++|||++|++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0112345677889999999999999999999999874
No 242
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.1e-35 Score=357.26 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=202.8
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccch------------hhHHHHHHHHHHHhcCCCCceeEEEeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQ------------HGVQQFHAEIKTLGNVRHPNLVTLIGY 886 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~niv~l~~~ 886 (1103)
.++|.+.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467999999999999999999765 5789999999765322 335778999999999999999999999
Q ss_pred EecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC---CEE
Q 043720 887 RASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF---NAY 963 (1103)
Q Consensus 887 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~k 963 (1103)
+.+.+..|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999997754 499999999999999999999999 999999999999998776 699
Q ss_pred EeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH
Q 043720 964 LSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 964 i~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
|+|||++...... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... .......
T Consensus 190 l~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~ 258 (504)
T 3q5i_A 190 IVDFGLSSFFSKD--YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQN--------DQDIIKK 258 (504)
T ss_dssp ECCCTTCEECCTT--SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHH
T ss_pred EEECCCCEEcCCC--CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHH
Confidence 9999999876433 23345679999999999874 68999999999999999999999997322 1122222
Q ss_pred HHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1044 LLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... +... ++... ....+..+.+++.+|++.||++|||++|++++
T Consensus 259 i~~-~~~~--~~~~~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 259 VEK-GKYY--FDFND----WKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHH-CCCC--CCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHc-CCCC--CCccc----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 221 1110 01111 12345779999999999999999999999864
No 243
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.6e-35 Score=354.80 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=200.1
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
++|++.+.||+|+||+||+|... ++..||||++..... ......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 46999999999999999999765 688999999976542 2345778999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC---CCEEEeecccccccCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD---FNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~ki~Dfgla~~~~~ 975 (1103)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.. +.+||+|||++.....
T Consensus 117 ~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 117 CYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp CCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999987654 389999999999999999999999 99999999999999764 4599999999987643
Q ss_pred CCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccc
Q 043720 976 SETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFN 1055 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1055 (1103)
. .......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ........ .+... +.
T Consensus 192 ~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~-~~~~~--~~ 257 (494)
T 3lij_A 192 Q--KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--------QEILRKVE-KGKYT--FD 257 (494)
T ss_dssp T--BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHH-HTCCC--CC
T ss_pred C--ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHH-hCCCC--CC
Confidence 3 2334567999999999886 4689999999999999999999999973221 11222221 11110 11
Q ss_pred ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1056 AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1056 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... ....+..+.+++.+||+.||++|||+.|++++
T Consensus 258 ~~~----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 258 SPE----WKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp SGG----GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred chh----cccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 111 12345778999999999999999999999864
No 244
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.9e-36 Score=333.01 Aligned_cols=253 Identities=24% Similarity=0.326 Sum_probs=189.5
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhH-HHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGV-QQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++......... +.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 45799999999999999999976 46899999999766444333 34455556688889999999999999999999999
Q ss_pred eecCCCChHHHHHhh--cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 898 NYLPGGNLENFIKAR--TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||++ |+|.++++.. ....+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9996 5998887652 3356999999999999999999999843 899999999999999999999999999986643
Q ss_pred CCCccccCCcccccccCcccc----ccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccc
Q 043720 976 SETHATTGVAGTFGYVAPEYA----LTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVK 1051 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1103)
.. ......|++.|+|||++ .+..++.++||||+|+++|||++|+.||..... ............
T Consensus 163 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-------~~~~~~~~~~~~--- 230 (290)
T 3fme_A 163 DV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-------PFQQLKQVVEEP--- 230 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC-------HHHHHHHHHHSC---
T ss_pred cc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc-------hHHHHHHHhccC---
Confidence 22 22334689999999996 566788999999999999999999999973211 111111111111
Q ss_pred ccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 043720 1052 DVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQ 1093 (1103)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1093 (1103)
.........+..+.+++.+|++.||++|||++|+++
T Consensus 231 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 231 ------SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ------CCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ------CCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111112345678999999999999999999999987
No 245
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.3e-36 Score=343.56 Aligned_cols=263 Identities=23% Similarity=0.341 Sum_probs=204.6
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecC-----CeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG-----NEM 893 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 893 (1103)
.++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457999999999999999999655 68899999998665555668899999999999999999999998654 478
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
|+||||++ |+|.++++... +++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999996 59999997643 89999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--cccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 974 GTSETH--ATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 974 ~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ................
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~~~ 253 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY-----LDQLNHILGILGSPSQ 253 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG-----GGHHHHHHHHHCSCCH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHHHhCCCCH
Confidence 533222 1345579999999998754 4589999999999999999999999974321 1111111111000000
Q ss_pred cc-----------c---cccc---ccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 KD-----------V---FNAE---LWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 ~~-----------~---~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.. . .... .+.......+..+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0 0000 0000112345678999999999999999999999874
No 246
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.1e-35 Score=333.08 Aligned_cols=253 Identities=22% Similarity=0.358 Sum_probs=200.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
.++|++.+.||+|+||+||+|... +++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH-HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 457999999999999999999776 488999999875533 356788999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCC
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSET 978 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~ 978 (1103)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT-L 171 (302)
T ss_dssp CCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-H
T ss_pred eCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc-c
Confidence 999999999987643 4589999999999999999999999 9999999999999999999999999987643211 1
Q ss_pred ccccCCcccccccCcccc-----ccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 979 HATTGVAGTFGYVAPEYA-----LTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 979 ~~~~~~~g~~~y~aPE~~-----~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
.......|++.|+|||++ ....++.++||||||+++|||++|+.||.... ............. .
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~-~-- 240 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKSDP-P-- 240 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSCC-C--
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC--------HHHHHHHHhccCC-c--
Confidence 122345689999999998 46678899999999999999999999987321 1111111111111 0
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....+...+..+.+++.+||+.||++|||++|++++
T Consensus 241 -----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 241 -----TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -----CCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -----ccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 011234456789999999999999999999999863
No 247
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.2e-36 Score=343.64 Aligned_cols=260 Identities=20% Similarity=0.352 Sum_probs=207.2
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchh----------------hHHHHHHHHHHHhcCCCCceeEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQH----------------GVQQFHAEIKTLGNVRHPNLVTL 883 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~E~~~l~~l~h~niv~l 883 (1103)
.++|++.+.||+|+||+||+|.. +++.||||++....... ..+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35799999999999999999988 89999999987553221 12789999999999999999999
Q ss_pred EeEEecCCeEEEEEeecCCCChHHH------HHhhcCCcccHHHHHHHHHHHHHHHHHHHh-CCCCCcccCCCCCCcEEE
Q 043720 884 IGYRASGNEMFLIYNYLPGGNLENF------IKARTSRAVDWKILHKIALDVASALAYLHD-QCAPRVLHRDVKPSNILL 956 (1103)
Q Consensus 884 ~~~~~~~~~~~lV~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivH~Dlk~~NIll 956 (1103)
++++.+.+..++||||+++++|.++ ++......+++..++.++.|++.||+|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999999 665445669999999999999999999999 8 99999999999999
Q ss_pred CCCCCEEEeecccccccCCCCCccccCCcccccccCccccccC-CCCC-cchhHHHHHHHHHHHhCCCCCCCCCCCCCCC
Q 043720 957 DDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTC-RVSD-KADVYSYGVVLLELISDKKALDPSFSSHGDG 1034 (1103)
Q Consensus 957 ~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~sDvwslGvil~elltg~~p~~~~~~~~~~~ 1034 (1103)
+.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||||+++|||++|+.||......
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 99999999999999875432 33456789999999999877 5666 999999999999999999999743221
Q ss_pred cchHHHHHHHHhcCcccccccc---------cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1035 FNIISWASMLLRQGQVKDVFNA---------ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....... .........+. ..........+..+.+++.+||+.||++||+++|++++
T Consensus 259 ---~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 259 ---VELFNNI-RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp ---HHHHHHH-TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ---HHHHHHH-hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1111111 11111000000 00000114456789999999999999999999999873
No 248
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=7.1e-36 Score=343.72 Aligned_cols=270 Identities=21% Similarity=0.297 Sum_probs=201.7
Q ss_pred HHHHHHHhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccch----------hhHHHHHHHHHHHhcCCCCceeE
Q 043720 813 YESIIRATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQ----------HGVQQFHAEIKTLGNVRHPNLVT 882 (1103)
Q Consensus 813 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~ 882 (1103)
..++....++|++.+.||+|+||+||+|...+++.||||++...... ...+.+.+|+.++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 45677788999999999999999999998888999999998654321 22478999999999999999999
Q ss_pred EEeEEec-----CCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC
Q 043720 883 LIGYRAS-----GNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD 957 (1103)
Q Consensus 883 l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~ 957 (1103)
+++++.. ....|+||||++ |+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA 168 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence 9999843 347899999997 69999887543 4589999999999999999999999 999999999999999
Q ss_pred CCCCEEEeecccccccCCCCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcc
Q 043720 958 DDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFN 1036 (1103)
Q Consensus 958 ~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~ 1036 (1103)
.++.+||+|||++...... .......|++.|+|||++.+ ..++.++||||+||++|||++|+.||..... ..
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-----~~ 241 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTAD--ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF-----YN 241 (362)
T ss_dssp TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HH
T ss_pred CCCCEEEEecCcccccccc--cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH-----HH
Confidence 9999999999999754322 22344578999999999876 6789999999999999999999999974321 11
Q ss_pred hHHHHHHHHhcCccc-----------cc-------ccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1037 IISWASMLLRQGQVK-----------DV-------FNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1037 ~~~~~~~~~~~~~~~-----------~~-------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
............... +. .....+.......+..+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 242 QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 111111000000000 00 00000111123345678999999999999999999999875
No 249
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.8e-35 Score=339.21 Aligned_cols=263 Identities=24% Similarity=0.332 Sum_probs=202.1
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecC-----CeE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG-----NEM 893 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~ 893 (1103)
.++|++.+.||+|+||+||+|... +|+.||||++...........+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 457999999999999999999765 58999999997655555667888999999999999999999988654 678
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
++||||++ ++|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999996 6999998764 389999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc---------cccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH
Q 043720 974 GTSETH---------ATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 974 ~~~~~~---------~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
...... ......||+.|+|||++.. ..++.++||||||+++|||++|+.||..... .........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~ 237 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY-----RHQLLLIFG 237 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHH
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc-----HHHHHHHHH
Confidence 432211 1223578999999998754 6789999999999999999999999974321 000000000
Q ss_pred HHhcCcccc------------ccc------ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1044 LLRQGQVKD------------VFN------AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1044 ~~~~~~~~~------------~~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
......... .+. ...........+.++.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 000 000000112456778999999999999999999999874
No 250
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=9.3e-36 Score=338.12 Aligned_cols=257 Identities=19% Similarity=0.282 Sum_probs=200.9
Q ss_pred cCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CCceeEEEeEEec--CCeEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HPNLVTLIGYRAS--GNEMFLI 896 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lV 896 (1103)
++|++.+.||+|+||+||+|.. .+++.||||++... ..+.+.+|+.++++++ ||||+++++++.. ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 5799999999999999999965 56899999998643 3467889999999997 9999999999987 6788999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCC-CEEEeecccccccCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDF-NAYLSDFGLSRLLGT 975 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~ki~Dfgla~~~~~ 975 (1103)
|||+++++|.++++. +++.++..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++....
T Consensus 112 ~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999999998753 78899999999999999999999 999999999999999776 899999999987643
Q ss_pred CCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH--------HHh
Q 043720 976 SETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM--------LLR 1046 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~--------~~~ 1046 (1103)
.. ......|++.|+|||++.+ ..++.++|||||||++|||++|+.||...... .......... ...
T Consensus 184 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~---~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 184 GQ--EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN---YDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp TC--CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH---HHHHHHHHHHHCHHHHHHHHH
T ss_pred CC--ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch---HHHHHHHHHhcCCchhhhHHH
Confidence 32 2334578999999999877 67899999999999999999999999643221 0000000000 000
Q ss_pred cCc--------------ccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1047 QGQ--------------VKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1047 ~~~--------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... .................+..+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000 000001111111223357889999999999999999999999974
No 251
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.4e-35 Score=348.04 Aligned_cols=197 Identities=26% Similarity=0.335 Sum_probs=172.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcC------CCCceeEEEeEEecCCe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV------RHPNLVTLIGYRASGNE 892 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~ 892 (1103)
..+|++.+.||+|+||+||+|... +++.||||++.... ...+.+.+|+.+++.+ .|+||+++++++...+.
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 357999999999999999999655 58999999987542 2345667787777776 57899999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC--EEEeecccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN--AYLSDFGLS 970 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~ki~Dfgla 970 (1103)
.++||||+. ++|.+++.......+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||++
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999995 6999999887666699999999999999999999999 9999999999999999887 999999999
Q ss_pred cccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDP 1026 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~ 1026 (1103)
+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 250 ~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 250 CYEHQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp EETTC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecCC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 76432 23345789999999999999999999999999999999999999874
No 252
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.2e-35 Score=340.26 Aligned_cols=257 Identities=24% Similarity=0.338 Sum_probs=193.0
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC------e
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN------E 892 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~ 892 (1103)
++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57999999999999999999654 589999999976432 334577889999999999999999999997654 7
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.|+||||++ ++|.++++. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred eEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 899999996 588888853 388999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHH--------
Q 043720 973 LGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASML-------- 1044 (1103)
Q Consensus 973 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 1044 (1103)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...+....
T Consensus 177 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~ 247 (371)
T 2xrw_A 177 AGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH-------IDQWNKVIEQLGTPCP 247 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-------HHHHHHHHC-CCCCCH
T ss_pred cccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHHHhCCCCH
Confidence 5432 223446789999999999999999999999999999999999999974321 11111100
Q ss_pred -------------HhcC-ccc-----ccccccccCCC---ChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1045 -------------LRQG-QVK-----DVFNAELWASG---PHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1045 -------------~~~~-~~~-----~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.... ... ..+........ ....+..+.+++.+||+.||++|||++|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000 000 00000000000 12236789999999999999999999999975
No 253
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=346.13 Aligned_cols=178 Identities=22% Similarity=0.234 Sum_probs=99.4
Q ss_pred CEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCC
Q 043720 110 RVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGN 189 (1103)
Q Consensus 110 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 189 (1103)
+.++.++++++ .+|..+. +++++|||++|++++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45666666666 5665543 46667777777766555666666666666666666666555666666666666666666
Q ss_pred cCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcccc
Q 043720 190 QVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIP 269 (1103)
Q Consensus 190 ~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 269 (1103)
++++..+..|+++++|++|+|++|++++..|..+.. +++|++|+|++|.+++..+..+..+++|++|+|++|.+++..+
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQD-LYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccc-cccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 666544445555666666666666555333333322 3445555555555544444444444444444444444444433
Q ss_pred ccccCCCCCCEEEccCCcCCCc
Q 043720 270 RELGWLRKLEVLDVSRNRLNGL 291 (1103)
Q Consensus 270 ~~l~~l~~L~~L~Ls~N~l~~~ 291 (1103)
..+..+++|+.|+|++|.+.+.
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEE
T ss_pred hHhcccCCCcEEeCCCCcCcEe
Confidence 4444444444444444444433
No 254
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.6e-35 Score=328.11 Aligned_cols=254 Identities=24% Similarity=0.333 Sum_probs=206.5
Q ss_pred HhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc--------hhhHHHHHHHHHHHhcCC-CCceeEEEeEEe
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF--------QHGVQQFHAEIKTLGNVR-HPNLVTLIGYRA 888 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 888 (1103)
..++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3468999999999999999999775 589999999865431 223567889999999996 999999999999
Q ss_pred cCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecc
Q 043720 889 SGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFG 968 (1103)
Q Consensus 889 ~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfg 968 (1103)
..+..++||||+++++|.++++... .+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 9999999999999999999998753 489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCccccCCcccccccCccccc------cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHH
Q 043720 969 LSRLLGTSETHATTGVAGTFGYVAPEYAL------TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWAS 1042 (1103)
Q Consensus 969 la~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1042 (1103)
++....... ......|++.|+|||++. ...++.++||||||+++|||++|+.||.... ......
T Consensus 170 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~ 239 (298)
T 1phk_A 170 FSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--------QMLMLR 239 (298)
T ss_dssp TCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHH
T ss_pred chhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc--------HHHHHH
Confidence 998764332 234457899999999885 4567889999999999999999999986321 111111
Q ss_pred HHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1043 MLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...... .. .........+..+.+++.+||+.||++||+++|++++
T Consensus 240 ~~~~~~-~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 240 MIMSGN-YQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHHTC-CC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHhcCC-cc------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 111111 10 0011123456789999999999999999999999863
No 255
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=3.5e-35 Score=347.22 Aligned_cols=261 Identities=21% Similarity=0.311 Sum_probs=207.6
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCC-CceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRH-PNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|.. .+++.||||++...... +.+.+|+++++.++| +++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 36799999999999999999975 56899999987655433 357789999999976 66667777778888999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE---CCCCCEEEeecccccccC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL---DDDFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~ki~Dfgla~~~~ 974 (1103)
||+ +++|.++++... ..+++.+++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 83 e~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 999999998543 4599999999999999999999999 99999999999999 588899999999998765
Q ss_pred CCCCc------cccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcC
Q 043720 975 TSETH------ATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQG 1048 (1103)
Q Consensus 975 ~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1103)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ............
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~-----~~~~~~~~i~~~- 231 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAG-----TKKQKYEKISEK- 231 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-----SHHHHHHHHHHH-
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccch-----hHHHHHHHHhhc-
Confidence 43321 223567999999999999999999999999999999999999999743221 111111111111
Q ss_pred cccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhh
Q 043720 1049 QVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQ 1099 (1103)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 1099 (1103)
.....++ .. ...++.++.+++.+||+.+|++||++++|++.|+++.
T Consensus 232 ~~~~~~~-~l----~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 232 KVATSIE-AL----CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HHHSCHH-HH----HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred cccccHH-HH----hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 0000000 00 1234578999999999999999999999999999874
No 256
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2e-35 Score=334.76 Aligned_cols=265 Identities=24% Similarity=0.348 Sum_probs=204.2
Q ss_pred HhcCCCCcceeccCCcccEEEEEE--cCCcEEEEEEcccccchh-hHHHHHHHHHHHhcC---CCCceeEEEeEEe----
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEI--SPGILVAVKKLAVGRFQH-GVQQFHAEIKTLGNV---RHPNLVTLIGYRA---- 888 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~--~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~h~niv~l~~~~~---- 888 (1103)
+.++|++.+.||+|+||+||+|.. .+++.||||++....... ....+.+|+.+++.+ .||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 456899999999999999999987 458899999987654321 223456677776665 8999999999987
Q ss_pred -cCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeec
Q 043720 889 -SGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDF 967 (1103)
Q Consensus 889 -~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Df 967 (1103)
.....++||||++ |+|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 5568899999997 6999999887666699999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc
Q 043720 968 GLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ 1047 (1103)
Q Consensus 968 gla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1103)
|+++..... .......|++.|+|||++.+..++.++||||||+++|||++|+.||..... .............
T Consensus 165 g~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~ 237 (326)
T 1blx_A 165 GLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-----VDQLGKILDVIGL 237 (326)
T ss_dssp CSCCCCCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCC
T ss_pred cccccccCC--CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHHHcCC
Confidence 999865422 233456789999999999999999999999999999999999999974321 1111111111000
Q ss_pred C---cccc-------ccc---ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1048 G---QVKD-------VFN---AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1048 ~---~~~~-------~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. .... .+. ...........+..+.+++.+||+.||++||+++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp CCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 0000 000 000011223456788999999999999999999999964
No 257
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.1e-35 Score=333.22 Aligned_cols=264 Identities=20% Similarity=0.310 Sum_probs=207.0
Q ss_pred cCCCCcceeccCCcccEEEEEE--cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCC------ceeEEEeEEecCCe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI--SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHP------NLVTLIGYRASGNE 892 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~l~~~~~~~~~ 892 (1103)
++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+.+++.++|+ +++++++++...+.
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 5799999999999999999976 35889999998653 23456788899999888655 49999999999999
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC--------------
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD-------------- 958 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~-------------- 958 (1103)
.++||||+ +++|.+++.......+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 88999999887656789999999999999999999999 9999999999999987
Q ss_pred -----CCCEEEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCC
Q 043720 959 -----DFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGD 1033 (1103)
Q Consensus 959 -----~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~ 1033 (1103)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~---- 239 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDE----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS---- 239 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTS----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH----
T ss_pred cccccCCCceEeeCcccccCcc----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh----
Confidence 66899999999986432 22345789999999999999999999999999999999999999974321
Q ss_pred CcchHHHHHHHHhcCccc---------ccc---------------------c-ccccCCCChhHHHHHHHHHHHccccCC
Q 043720 1034 GFNIISWASMLLRQGQVK---------DVF---------------------N-AELWASGPHDDLEDMLHLALRCTVETL 1082 (1103)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~~---------~~~---------------------~-~~~~~~~~~~~~~~l~~li~~cl~~dP 1082 (1103)
........... ..... ..+ . ...........+..+.+++.+||+.||
T Consensus 240 -~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 240 -KEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp -HHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred -HHHHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 11111111100 00000 000 0 000011234567889999999999999
Q ss_pred CCCCCHHHHHHH--HHhhhc
Q 043720 1083 STRPTMKQVVQC--LKQIQH 1100 (1103)
Q Consensus 1083 ~~RPs~~evl~~--L~~i~~ 1100 (1103)
++|||++|++++ ++++++
T Consensus 318 ~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 318 AKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp TTSCCHHHHTTSGGGGGGGC
T ss_pred ccccCHHHHhcCHHHHHHhc
Confidence 999999999965 555443
No 258
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.4e-35 Score=333.91 Aligned_cols=253 Identities=19% Similarity=0.315 Sum_probs=199.9
Q ss_pred HhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCC--CCceeEEEeEEecCCeEEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVR--HPNLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~l 895 (1103)
..++|++.+.||+|+||+||+|...+++.||||++..... ....+.+.+|+.++++++ |+||+++++++...+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 4567999999999999999999888899999999976543 345678899999999997 5999999999999999999
Q ss_pred EEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 896 IYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
||| +.+++|.++++... .+++.++..++.|++.||+|||++ +|+||||||+||++++ +.+||+|||++.....
T Consensus 106 v~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 999 55889999998754 489999999999999999999999 9999999999999965 7999999999987643
Q ss_pred CCCc-cccCCcccccccCcccccc-----------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH
Q 043720 976 SETH-ATTGVAGTFGYVAPEYALT-----------CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 976 ~~~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
.... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... .......
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~~ 251 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHA 251 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHH
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-------HHHHHHH
Confidence 3221 2234578999999999865 4678899999999999999999999963211 1111111
Q ss_pred HHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1044 LLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. .+.......+...+..+.+++.+||+.||++||+++|++++
T Consensus 252 ~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 252 I---------IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp H---------HCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H---------HhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 1 11122222333445779999999999999999999999975
No 259
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=9.7e-36 Score=341.77 Aligned_cols=259 Identities=23% Similarity=0.359 Sum_probs=184.0
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEccccc-chhhHHHHHHHHHHHhcCCCCceeEEEeEEecC------C
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGR-FQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG------N 891 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~ 891 (1103)
.++|++.+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36799999999999999999965 468999999986543 233567788999999999999999999998654 5
Q ss_pred eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 892 EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 892 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
..|+|+||+ +++|.++++.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 689999999 78999998763 499999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCc-
Q 043720 972 LLGTSETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQ- 1049 (1103)
Q Consensus 972 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 1049 (1103)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... ...............
T Consensus 181 ~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~l~~i~~~~g~p~~ 251 (367)
T 2fst_X 181 HTAD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-----IDQLKLILRLVGTPGA 251 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHHHCSCCH
T ss_pred cccc----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCCH
Confidence 6532 2344678999999999876 6789999999999999999999999974321 111111111100000
Q ss_pred --ccc--------cccc------cccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1050 --VKD--------VFNA------ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1050 --~~~--------~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... .+.. ..........+..+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 252 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 0000 00000012335678999999999999999999999875
No 260
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=347.44 Aligned_cols=266 Identities=22% Similarity=0.352 Sum_probs=184.5
Q ss_pred CCCC-cceeccCCcccEEEEEEc---CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEe--cCCeEEE
Q 043720 822 DFNT-SNCIGSGGFGTTYKAEIS---PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRA--SGNEMFL 895 (1103)
Q Consensus 822 ~~~~-~~~lg~G~fg~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~l 895 (1103)
.|++ .++||+|+||+||+|... +++.||||++...... ..+.+|+.++++++||||+++++++. .....|+
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~---~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS---MSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC---HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC---HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 4555 457999999999999865 4789999999755433 46789999999999999999999984 4678999
Q ss_pred EEeecCCCChHHHHHhhcC-------CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE----CCCCCEEE
Q 043720 896 IYNYLPGGNLENFIKARTS-------RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL----DDDFNAYL 964 (1103)
Q Consensus 896 V~E~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~ki 964 (1103)
||||++ ++|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999996 588888864321 2489999999999999999999999 99999999999999 67789999
Q ss_pred eecccccccCCCCC--ccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC--CCCcchHH
Q 043720 965 SDFGLSRLLGTSET--HATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSH--GDGFNIIS 1039 (1103)
Q Consensus 965 ~Dfgla~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~--~~~~~~~~ 1039 (1103)
+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ........
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987643322 233456789999999999874 58999999999999999999999997443211 00111111
Q ss_pred HHHHHHhcCcc-----ccc------------cccccc---------CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 043720 1040 WASMLLRQGQV-----KDV------------FNAELW---------ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQ 1093 (1103)
Q Consensus 1040 ~~~~~~~~~~~-----~~~------------~~~~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1093 (1103)
........+.. ... +..... ..........+.+++.+||+.||++|||++|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11110000000 000 000000 0001112456889999999999999999999987
Q ss_pred H
Q 043720 1094 C 1094 (1103)
Q Consensus 1094 ~ 1094 (1103)
+
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 5
No 261
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-35 Score=336.21 Aligned_cols=253 Identities=23% Similarity=0.381 Sum_probs=197.4
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-------hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-------QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN 891 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 891 (1103)
.++|++.+.||+|+||+||+|... +++.||||++..... ......+.+|+.++++++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999765 578999999865432 122345889999999999999999999987665
Q ss_pred eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC---EEEeecc
Q 043720 892 EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN---AYLSDFG 968 (1103)
Q Consensus 892 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~Dfg 968 (1103)
.|+||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred -eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 899999999999999997643 489999999999999999999999 9999999999999987654 9999999
Q ss_pred cccccCCCCCccccCCcccccccCccccc---cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHH
Q 043720 969 LSRLLGTSETHATTGVAGTFGYVAPEYAL---TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLL 1045 (1103)
Q Consensus 969 la~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1103)
++...... .......|++.|+|||++. ...++.++||||||+++|||++|+.||...... ..... ..
T Consensus 163 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~----~~ 232 (322)
T 2ycf_A 163 HSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKD----QI 232 (322)
T ss_dssp TCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHH----HH
T ss_pred cceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHH----HH
Confidence 99876432 1223446899999999974 567889999999999999999999999743221 11111 11
Q ss_pred hcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1046 RQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
..+... ..+.. ....+..+.+++.+||+.||++||+++|++++
T Consensus 233 ~~~~~~--~~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 233 TSGKYN--FIPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp HHTCCC--CCHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhCccc--cCchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 111110 00111 12345778999999999999999999999853
No 262
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2e-35 Score=343.01 Aligned_cols=259 Identities=22% Similarity=0.312 Sum_probs=194.3
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC------eEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN------EMF 894 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~~ 894 (1103)
.+|++.+.||+|+||+||+|+...+..||+|++...... ..+|+.+++.++||||+++++++...+ ..+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 468999999999999999999887878999988654322 236999999999999999999985533 388
Q ss_pred EEEeecCCCChHHHHHh--hcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC-CCCCEEEeeccccc
Q 043720 895 LIYNYLPGGNLENFIKA--RTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD-DDFNAYLSDFGLSR 971 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ki~Dfgla~ 971 (1103)
+||||+++ ++.+.+.. .....+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||+++
T Consensus 115 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999976 44444432 1235589999999999999999999999 999999999999998 79999999999998
Q ss_pred ccCCCCCccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHH------
Q 043720 972 LLGTSETHATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASML------ 1044 (1103)
Q Consensus 972 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 1044 (1103)
...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..........
T Consensus 191 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~----~~l~~i~~~~g~p~~~ 264 (394)
T 4e7w_A 191 ILIAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI----DQLVEIIKVLGTPSRE 264 (394)
T ss_dssp ECCTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHHHHHCCCCHH
T ss_pred cccCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHHhCCCCHH
Confidence 764332 23355789999999998764 5899999999999999999999999743210 0011111000
Q ss_pred ---HhcCcccc-----cccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1045 ---LRQGQVKD-----VFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1045 ---~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
........ .....+....+...+.++.+++.+||+.||++|||+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000 000000011123356789999999999999999999999975
No 263
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=340.32 Aligned_cols=259 Identities=21% Similarity=0.346 Sum_probs=202.2
Q ss_pred HhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
..++|++.+.||+|+||+||+|.... .||+|++..... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35689999999999999999998764 499999876533 223456788999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++++|.++++... ..+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++......
T Consensus 109 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp BCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred ecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999999997643 4589999999999999999999999 999999999999998 6799999999987653211
Q ss_pred ----CccccCCcccccccCcccccc---------CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHH
Q 043720 978 ----THATTGVAGTFGYVAPEYALT---------CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASML 1044 (1103)
Q Consensus 978 ----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1103)
........|++.|+|||++.. ..++.++||||||+++|||++|+.||..... ......
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--------~~~~~~- 254 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA--------EAIIWQ- 254 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH--------HHHHHH-
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH-
Confidence 122334468999999999864 4578899999999999999999999873211 111111
Q ss_pred HhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1045 LRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
...+... . ......+..+.+++.+||+.||++||+++++++.|+++.+.
T Consensus 255 ~~~~~~~-----~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 255 MGTGMKP-----N---LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp HHTTCCC-----C---CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred hccCCCC-----C---CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1111111 0 11123456689999999999999999999999999998653
No 264
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.4e-35 Score=328.05 Aligned_cols=252 Identities=23% Similarity=0.368 Sum_probs=195.3
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEec---------
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS--------- 889 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--------- 889 (1103)
.++|++.+.||+|+||+||+|... +++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 457899999999999999999764 6899999998643 3446788999999999999999999998754
Q ss_pred ----CCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEe
Q 043720 890 ----GNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLS 965 (1103)
Q Consensus 890 ----~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~ 965 (1103)
.+..|+||||+++|+|.++++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIG 158 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEEC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEe
Confidence 457899999999999999998643 4578899999999999999999999 99999999999999999999999
Q ss_pred ecccccccCCCC-------------CccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCC
Q 043720 966 DFGLSRLLGTSE-------------THATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSH 1031 (1103)
Q Consensus 966 Dfgla~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~ 1031 (1103)
|||++....... ........|++.|+|||++.+. .++.++||||||+++|||++ ||...
T Consensus 159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~---- 231 (303)
T 1zy4_A 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG---- 231 (303)
T ss_dssp CCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH----
T ss_pred eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc----
Confidence 999998654221 1122345689999999999764 68999999999999999998 44311
Q ss_pred CCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1032 GDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
........... .. ........+...+..+.+++.+||+.||++|||++|++++
T Consensus 232 ---~~~~~~~~~~~-~~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 232 ---MERVNILKKLR-SV------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ---HHHHHHHHHHH-ST------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---hhHHHHHHhcc-cc------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 01111111111 11 1111122344566778999999999999999999999874
No 265
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.4e-34 Score=354.96 Aligned_cols=150 Identities=23% Similarity=0.241 Sum_probs=101.3
Q ss_pred CccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEecc
Q 043720 568 SLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELS 647 (1103)
Q Consensus 568 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 647 (1103)
+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|+
T Consensus 233 ~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls 309 (597)
T 3oja_B 233 ELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLS 309 (597)
T ss_dssp CCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECC
T ss_pred CCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECC
Confidence 46666666666664 2556667777777777777776667777777777777777777774 46666777888888888
Q ss_pred CccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCC-CCccccccccccCCCCCCCC
Q 043720 648 SNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFP-WNVTTMNCSGVIGNPFLDPC 724 (1103)
Q Consensus 648 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p-~~~~~~~~~~l~~Np~~c~C 724 (1103)
+|.++ .+|..+..+++|+.|+|++|+|++. | +..+++|+.|++++|++.+... ..+..+....+.+++..|.+
T Consensus 310 ~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 310 HNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp SSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHHHHHHHHhhhccccccccCCc
Confidence 88887 5677777888888888888888744 2 5566777777777776654211 12233333345666666654
No 266
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.4e-35 Score=323.61 Aligned_cols=252 Identities=24% Similarity=0.325 Sum_probs=204.7
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 467999999999999999999775 689999999876543 335678999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC---CCEEEeecccccccC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD---FNAYLSDFGLSRLLG 974 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~ki~Dfgla~~~~ 974 (1103)
||+++++|.+++.... .+++.++..++.|++.||+|||++ +|+||||||+||+++.+ +.+||+|||++....
T Consensus 101 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp CCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 9999999999987654 489999999999999999999999 99999999999999754 469999999998664
Q ss_pred CCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccc
Q 043720 975 TSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVF 1054 (1103)
Q Consensus 975 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1054 (1103)
... ......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||.... ......... .+....
T Consensus 176 ~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~-~~~~~~-- 241 (287)
T 2wei_A 176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVE-TGKYAF-- 241 (287)
T ss_dssp CCS--SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHH-HCCCCC--
T ss_pred CCC--ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHH-cCCCCC--
Confidence 322 2233458899999998876 48899999999999999999999987321 112222221 111100
Q ss_pred cccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1055 NAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1055 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
+. +.....+..+.+++.+|++.||++||+++|++++
T Consensus 242 ~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 242 DL----PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp CS----GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred Cc----hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 00 0112445779999999999999999999999984
No 267
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.3e-35 Score=332.11 Aligned_cols=256 Identities=27% Similarity=0.364 Sum_probs=183.3
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHH-HHhcCCCCceeEEEeEEecCCeEEEEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIK-TLGNVRHPNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lV~E 898 (1103)
++|++.+.||+|+||+||+|... +++.||||++...........+..|+. +++.++||||+++++++...+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57999999999999999999775 689999999987655555566666666 7778899999999999999999999999
Q ss_pred ecCCCChHHHHHhh---cCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCC
Q 043720 899 YLPGGNLENFIKAR---TSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGT 975 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~ 975 (1103)
|+++ +|.+++... ....+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 9974 888887642 2356899999999999999999999842 899999999999999999999999999986643
Q ss_pred CCCccccCCcccccccCcccc----ccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccc
Q 043720 976 SETHATTGVAGTFGYVAPEYA----LTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVK 1051 (1103)
Q Consensus 976 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1103)
.. ......|++.|+|||++ .+..++.++||||||+++|||++|+.||........ .. ....
T Consensus 179 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----------~~--~~~~ 243 (327)
T 3aln_A 179 SI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD-----------QL--TQVV 243 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------------CCCC
T ss_pred cc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH-----------HH--HHHh
Confidence 22 22334689999999998 466789999999999999999999999974321100 00 0000
Q ss_pred ccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1052 DVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
....+..........+..+.+++.+||+.||++||+++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 0001111111223456789999999999999999999999863
No 268
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5e-35 Score=330.44 Aligned_cols=259 Identities=19% Similarity=0.310 Sum_probs=193.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEe----------
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRA---------- 888 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~---------- 888 (1103)
.++|++.+.||+|+||+||+|.... ++.||||++.... ....+.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 3579999999999999999997764 8999999987553 345678899999999999999999999873
Q ss_pred ----cCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC-CCCCEE
Q 043720 889 ----SGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD-DDFNAY 963 (1103)
Q Consensus 889 ----~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~k 963 (1103)
+....|+||||++ |+|.++++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+|
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEE
Confidence 3468899999997 6999999653 489999999999999999999999 999999999999997 567999
Q ss_pred EeecccccccCCCCC--ccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHH
Q 043720 964 LSDFGLSRLLGTSET--HATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISW 1040 (1103)
Q Consensus 964 i~Dfgla~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~ 1040 (1103)
|+|||+++....... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ...
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~ 233 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE--------LEQ 233 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHH
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH--------HHH
Confidence 999999987643221 12233457889999998865 6789999999999999999999999974321 111
Q ss_pred HHHHHhcCc-------------ccccccccccC------CCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1041 ASMLLRQGQ-------------VKDVFNAELWA------SGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1041 ~~~~~~~~~-------------~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
......... ........... ......+..+.+++.+||+.||++||+++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 234 MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 111111000 00000000000 0112356789999999999999999999999874
No 269
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=4.9e-35 Score=342.54 Aligned_cols=259 Identities=24% Similarity=0.331 Sum_probs=194.0
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecC------CeE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASG------NEM 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~ 893 (1103)
.+|++.+.||+|+||+||+|... +++.||||++..... ...+|++++++++||||+++++++... ...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 35888999999999999999875 589999999865432 234799999999999999999987432 236
Q ss_pred EEEEeecCCCChHHHHHh--hcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC-CCEEEeecccc
Q 043720 894 FLIYNYLPGGNLENFIKA--RTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD-FNAYLSDFGLS 970 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~ki~Dfgla 970 (1103)
++||||+++ ++.+.++. .....+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999975 77776654 2235689999999999999999999999 99999999999999965 56899999999
Q ss_pred cccCCCCCccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHH-----
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASML----- 1044 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~----- 1044 (1103)
+...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+.......
T Consensus 205 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~l~~i~~~lg~p~~ 278 (420)
T 1j1b_A 205 KQLVRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG----VDQLVEIIKVLGTPTR 278 (420)
T ss_dssp EECCTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCSCCH
T ss_pred hhcccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCH
Confidence 8764332 23345789999999998764 789999999999999999999999974321 01111111100
Q ss_pred --Hh--cCccccccccccc-----CCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1045 --LR--QGQVKDVFNAELW-----ASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1045 --~~--~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
+. .....+...+... ...+...+.++.+++.+||+.||++||++.|++++
T Consensus 279 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00 0001111000000 00123456789999999999999999999999864
No 270
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.6e-34 Score=326.54 Aligned_cols=268 Identities=21% Similarity=0.302 Sum_probs=244.9
Q ss_pred CCCChhhHHHHHHHHhhc-cCCCCcccCcC---CCCCCCCceeeeEecC---------CCCeEEEEecCCCCCCCCCCcc
Q 043720 1 SGKVLPEKTILLEFKNSV-SDPSGILSSWQ---TNTSSHCSWFGVSCDS---------ESRVVALNITGGDVSEGNSKPF 67 (1103)
Q Consensus 1 ~~~~~~~~~aLl~~k~~~-~d~~~~l~sW~---~~~~~~C~W~GV~C~~---------~~~v~~l~l~~~~~~~~~~~~~ 67 (1103)
++++..|++||++||+++ .|+.+++++|. ....++|.|.||.|+. ..+|+.+++++..+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l-------- 93 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPL-------- 93 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCC--------
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCc--------
Confidence 467889999999999999 58888999994 3345799999999962 36888898876432
Q ss_pred ccccccccccccccccccceeccCCCccccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCc
Q 043720 68 FSCLMTAQFPFYGFGMRRRTCLHGRGKLVGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRL 147 (1103)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~ 147 (1103)
..+|+.++++++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+
T Consensus 94 -----------------------------~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~l 142 (328)
T 4fcg_A 94 -----------------------------PQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-AL 142 (328)
T ss_dssp -----------------------------SSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CC
T ss_pred -----------------------------hhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cC
Confidence 257888899999999999999999 99999999999999999999999 89
Q ss_pred cccccCCCCCCEEEccccccCCCCCCCCCC---------CCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCC
Q 043720 148 PNEFVGLRNLRVLNLAFNRIDGDIPFSLRN---------FESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGS 218 (1103)
Q Consensus 148 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~---------l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ 218 (1103)
|..++.+++|++|+|++|++.+.+|..+.. +++|++|+|++|+++ .+|..++++++|++|+|++|+++ .
T Consensus 143 p~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~ 220 (328)
T 4fcg_A 143 PASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-A 220 (328)
T ss_dssp CGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-C
T ss_pred cHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-c
Confidence 999999999999999999999999998875 999999999999999 88999999999999999999999 6
Q ss_pred CChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccC
Q 043720 219 IPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGN 298 (1103)
Q Consensus 219 ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 298 (1103)
+|..+.. +++|++|+|++|++.+.+|..++.+++|++|+|++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+++
T Consensus 221 l~~~l~~-l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 LGPAIHH-LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp CCGGGGG-CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred Cchhhcc-CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 8887765 588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEecccC
Q 043720 299 CVELSVLVLSNL 310 (1103)
Q Consensus 299 l~~L~~L~l~~~ 310 (1103)
+++|+.+++..+
T Consensus 300 L~~L~~l~l~~~ 311 (328)
T 4fcg_A 300 LPANCIILVPPH 311 (328)
T ss_dssp SCTTCEEECCGG
T ss_pred ccCceEEeCCHH
Confidence 999999999754
No 271
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.8e-34 Score=331.82 Aligned_cols=269 Identities=22% Similarity=0.304 Sum_probs=191.7
Q ss_pred HHHHHHHhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCC
Q 043720 813 YESIIRATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGN 891 (1103)
Q Consensus 813 ~~~~~~~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 891 (1103)
.++.....++|++.+.||+|+||+||+|... +++.||||++...... ...+.+|+..++.++||||+++++++...+
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~ 92 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLG 92 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence 3556677889999999999999999999775 5899999988654322 245667888888889999999999986533
Q ss_pred e-------EEEEEeecCCCChHHHHHh--hcCCcccHHHHHHHHHHHHHHHHHHH--hCCCCCcccCCCCCCcEEECC-C
Q 043720 892 E-------MFLIYNYLPGGNLENFIKA--RTSRAVDWKILHKIALDVASALAYLH--DQCAPRVLHRDVKPSNILLDD-D 959 (1103)
Q Consensus 892 ~-------~~lV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~~LH--~~~~~~ivH~Dlk~~NIll~~-~ 959 (1103)
. .++||||+++ ++.+.+.. .....+++..+..++.|++.|+.||| +. +|+||||||+||+++. +
T Consensus 93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 2 8899999975 66655543 22345889999999999999999999 88 9999999999999996 8
Q ss_pred CCEEEeecccccccCCCCCccccCCcccccccCccccccC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchH
Q 043720 960 FNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTC-RVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNII 1038 (1103)
Q Consensus 960 ~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~ 1038 (1103)
+.+||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..... .....
T Consensus 169 ~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~~~~ 242 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS----AGQLH 242 (360)
T ss_dssp TEEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH
T ss_pred CcEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh----HHHHH
Confidence 999999999998764332 23345789999999998654 489999999999999999999999974321 00111
Q ss_pred HHHHHHHhcC------------ccccccc------ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1039 SWASMLLRQG------------QVKDVFN------AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1039 ~~~~~~~~~~------------~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.... ..... ......+ ...........+..+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 243 EIVR-VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHH-HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHH-HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1110 00000 0000000 001112223357789999999999999999999999875
No 272
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.5e-35 Score=332.81 Aligned_cols=253 Identities=23% Similarity=0.260 Sum_probs=175.8
Q ss_pred hcCCCCcc-eeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEec----CCeE
Q 043720 820 TGDFNTSN-CIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS----GNEM 893 (1103)
Q Consensus 820 ~~~~~~~~-~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 893 (1103)
.++|.+.+ .||+|+||+||+|... +++.||||++.... ....+....++.+.||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 45788855 6999999999999776 68999999986432 112223334556689999999999876 4568
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC---CCCEEEeecccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD---DFNAYLSDFGLS 970 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~Dfgla 970 (1103)
++||||+++|+|.+++.......+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 9999999999999999987666799999999999999999999999 9999999999999986 455999999999
Q ss_pred cccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
+..... ......|++.|+|||++.+..++.++||||||+++|||++|+.||........... ........
T Consensus 179 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-----~~~~~~~~-- 248 (336)
T 3fhr_A 179 KETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-----MKRRIRLG-- 248 (336)
T ss_dssp EEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------------------
T ss_pred eecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-----HHHhhhcc--
Confidence 865422 22345679999999999888899999999999999999999999974432111000 00000000
Q ss_pred cccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 KDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
............+..+.+++.+||+.||++|||++|++++
T Consensus 249 ----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 249 ----QYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----ccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0011111123456789999999999999999999999974
No 273
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.6e-35 Score=337.16 Aligned_cols=263 Identities=20% Similarity=0.298 Sum_probs=201.8
Q ss_pred cCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-----------CCceeEEEeEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-----------HPNLVTLIGYRA 888 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 888 (1103)
++|++.+.||+|+||+||+|.. .+++.||||++.... ...+.+.+|+.+++++. |+||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 5799999999999999999976 568999999987532 23567888999998886 899999999987
Q ss_pred cCC----eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC------C
Q 043720 889 SGN----EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD------D 958 (1103)
Q Consensus 889 ~~~----~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~------~ 958 (1103)
..+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||+++ +|+||||||+||+++ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 644 789999999 899999998866666999999999999999999999953 899999999999994 4
Q ss_pred CCCEEEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchH
Q 043720 959 DFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNII 1038 (1103)
Q Consensus 959 ~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~ 1038 (1103)
.+.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.......... . .
T Consensus 174 ~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~-~ 247 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK-D-D 247 (373)
T ss_dssp EEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C-H-H
T ss_pred cceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC-h-H
Confidence 457999999999876432 234578999999999999999999999999999999999999997543211110 0 0
Q ss_pred HHHHHHHh-cCcccc-----------cccc-------------------cccCCCChhHHHHHHHHHHHccccCCCCCCC
Q 043720 1039 SWASMLLR-QGQVKD-----------VFNA-------------------ELWASGPHDDLEDMLHLALRCTVETLSTRPT 1087 (1103)
Q Consensus 1039 ~~~~~~~~-~~~~~~-----------~~~~-------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 1087 (1103)
........ .+.... .+.. ......+...+..+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 11111100 000000 0000 0012345677889999999999999999999
Q ss_pred HHHHHHH
Q 043720 1088 MKQVVQC 1094 (1103)
Q Consensus 1088 ~~evl~~ 1094 (1103)
++|++++
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999874
No 274
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.9e-34 Score=332.38 Aligned_cols=200 Identities=26% Similarity=0.335 Sum_probs=171.6
Q ss_pred HhcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CC-----ceeEEEeEEecCC
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HP-----NLVTLIGYRASGN 891 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~ 891 (1103)
..++|++.+.||+|+||+||+|... +++.||||++... ......+..|+.+++.++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3568999999999999999999765 5889999998743 233566778888888774 44 5999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC--CCCCEEEeeccc
Q 043720 892 EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD--DDFNAYLSDFGL 969 (1103)
Q Consensus 892 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~--~~~~~ki~Dfgl 969 (1103)
..|+||||++ ++|.+++.......+++..+..++.|++.||+|||++ ..+|+||||||+||+++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999995 5999999887656699999999999999999999952 22999999999999995 577899999999
Q ss_pred ccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 043720 970 SRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDP 1026 (1103)
Q Consensus 970 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~ 1026 (1103)
++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 208 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 208 SCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9876432 3346789999999999999999999999999999999999999974
No 275
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=8.6e-35 Score=335.29 Aligned_cols=254 Identities=21% Similarity=0.335 Sum_probs=196.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeE-----
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEM----- 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 893 (1103)
++|.+.+.||+|+||+||+|... +|+.||||++..... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 57999999999999999999655 589999999976533 33467788999999999999999999999877654
Q ss_pred -EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 894 -FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 894 -~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
|+||||+. ++|.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 68888773 2389999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc-Ccc
Q 043720 973 LGTSETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ-GQV 1050 (1103)
Q Consensus 973 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1050 (1103)
... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... .......... +..
T Consensus 194 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~ 261 (371)
T 4exu_A 194 ADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--------LDQLTQILKVTGVP 261 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHHHCCC
T ss_pred ccc----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCh--------HHHHHHHHHHhCCC
Confidence 532 2345578999999999877 7789999999999999999999999974321 1111111110 000
Q ss_pred -ccc---------------ccccc---cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 -KDV---------------FNAEL---WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 -~~~---------------~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
.+. +.... ........+..+.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 00000 000112346789999999999999999999999875
No 276
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.2e-35 Score=333.13 Aligned_cols=243 Identities=26% Similarity=0.381 Sum_probs=201.1
Q ss_pred HhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchh-----hHHHHHHHHHHHhcCC--CCceeEEEeEEecC
Q 043720 819 ATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQH-----GVQQFHAEIKTLGNVR--HPNLVTLIGYRASG 890 (1103)
Q Consensus 819 ~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 890 (1103)
..++|++.+.||+|+||+||+|.. .+++.||||++....... ..+.+.+|+.++++++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 356799999999999999999965 468999999997654321 2345678999999996 59999999999999
Q ss_pred CeEEEEEeecCC-CChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC-CCCCEEEeecc
Q 043720 891 NEMFLIYNYLPG-GNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD-DDFNAYLSDFG 968 (1103)
Q Consensus 891 ~~~~lV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ki~Dfg 968 (1103)
+..++|+|++.+ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+|||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 999999999976 89999998754 489999999999999999999999 999999999999999 78899999999
Q ss_pred cccccCCCCCccccCCcccccccCccccccCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc
Q 043720 969 LSRLLGTSETHATTGVAGTFGYVAPEYALTCRV-SDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ 1047 (1103)
Q Consensus 969 la~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1103)
+++..... ......|++.|+|||++.+..+ +.++||||||+++|||++|+.||.... .....
T Consensus 196 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--------------~~~~~ 258 (320)
T 3a99_A 196 SGALLKDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------------EIIRG 258 (320)
T ss_dssp TCEECCSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------------HHHHC
T ss_pred cccccccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------------hhhcc
Confidence 99876432 2234568999999999877665 678999999999999999999986210 11111
Q ss_pred CcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1048 GQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. ...+...+..+.+++.+||+.||++||+++|++++
T Consensus 259 ~-----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 259 Q-----------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp C-----------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c-----------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 11233456789999999999999999999999874
No 277
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=323.87 Aligned_cols=253 Identities=26% Similarity=0.373 Sum_probs=183.7
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccchhhH-HHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRFQHGV-QQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.++|++.+.||+|+||+||+|... +++.||||++......... +.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356889999999999999999775 6899999999776544333 34445556788889999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHh-CCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHD-QCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
||+ ++.+..+... ....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 5555555443 34568999999999999999999998 6 8999999999999999999999999999765432
Q ss_pred CCccccCCcccccccCccccc-----cCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccc
Q 043720 977 ETHATTGVAGTFGYVAPEYAL-----TCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVK 1051 (1103)
Q Consensus 977 ~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1103)
. ......|++.|+|||++. ...++.++||||||+++|||++|+.||..... ............. .
T Consensus 179 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~-~ 248 (318)
T 2dyl_A 179 K--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-------DFEVLTKVLQEEP-P 248 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHHHHHHSCC-C
T ss_pred c--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-------cHHHHHHHhccCC-C
Confidence 2 233456899999999984 56788999999999999999999999873211 1112222221110 0
Q ss_pred ccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1052 DVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1052 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
........+..+.+++.+||+.||++||+++|++++
T Consensus 249 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 249 -------LLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp -------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -------CCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011122456789999999999999999999999864
No 278
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.6e-34 Score=328.46 Aligned_cols=260 Identities=19% Similarity=0.277 Sum_probs=201.9
Q ss_pred hcCCCCcceeccCCcccEEEEEEc-CC-cEEEEEEcccccchhhHHHHHHHHHHHhcCCCCc------eeEEEeEEecCC
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEIS-PG-ILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPN------LVTLIGYRASGN 891 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~ 891 (1103)
.++|++.+.||+|+||+||+|... ++ +.||||++... ....+.+.+|+.++++++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 357999999999999999999764 34 78999998753 234567888999999987655 999999999999
Q ss_pred eEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEE---------------
Q 043720 892 EMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILL--------------- 956 (1103)
Q Consensus 892 ~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll--------------- 956 (1103)
..++||||+ ++++.+++.......+++.++..++.||+.||+|||++ +|+||||||+||++
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccc
Confidence 999999999 67888888776556699999999999999999999999 99999999999999
Q ss_pred ----CCCCCEEEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCC
Q 043720 957 ----DDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHG 1032 (1103)
Q Consensus 957 ----~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~ 1032 (1103)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--- 244 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHE----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN--- 244 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTS----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH---
T ss_pred cccccCCCcEEEeecCccccccc----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH---
Confidence 5678999999999986432 22345789999999999999999999999999999999999999974321
Q ss_pred CCcchHHHHHHHHhc--------Ccccc-cccc---------------------cccCCCChhHHHHHHHHHHHccccCC
Q 043720 1033 DGFNIISWASMLLRQ--------GQVKD-VFNA---------------------ELWASGPHDDLEDMLHLALRCTVETL 1082 (1103)
Q Consensus 1033 ~~~~~~~~~~~~~~~--------~~~~~-~~~~---------------------~~~~~~~~~~~~~l~~li~~cl~~dP 1082 (1103)
............. ..... .... ..........+..+.+++.+||+.||
T Consensus 245 --~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 245 --REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp --HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred --HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 1111111111000 00000 0000 00011223446789999999999999
Q ss_pred CCCCCHHHHHHH
Q 043720 1083 STRPTMKQVVQC 1094 (1103)
Q Consensus 1083 ~~RPs~~evl~~ 1094 (1103)
++|||++|++++
T Consensus 323 ~~Rpt~~e~l~h 334 (355)
T 2eu9_A 323 AQRITLAEALLH 334 (355)
T ss_dssp TTSCCHHHHTTS
T ss_pred hhCcCHHHHhcC
Confidence 999999999854
No 279
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-34 Score=340.07 Aligned_cols=250 Identities=24% Similarity=0.336 Sum_probs=188.1
Q ss_pred CCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEEEeec
Q 043720 822 DFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLIYNYL 900 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~~ 900 (1103)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.+++++ +||||+++++++.+.+..|+||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 34556789999999998877778999999998653 235678899999876 8999999999999999999999999
Q ss_pred CCCChHHHHHhhcCCc-----ccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCC-------------CCE
Q 043720 901 PGGNLENFIKARTSRA-----VDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDD-------------FNA 962 (1103)
Q Consensus 901 ~~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~-------------~~~ 962 (1103)
. |+|.++++...... .++..++.++.||+.||+|||++ +|+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 69999998654311 12334678999999999999999 99999999999999754 479
Q ss_pred EEeecccccccCCCCCc---cccCCcccccccCcccccc-------CCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCC
Q 043720 963 YLSDFGLSRLLGTSETH---ATTGVAGTFGYVAPEYALT-------CRVSDKADVYSYGVVLLELIS-DKKALDPSFSSH 1031 (1103)
Q Consensus 963 ki~Dfgla~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~ 1031 (1103)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~- 246 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR- 246 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH-
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh-
Confidence 99999999877543221 2234579999999999865 678999999999999999999 89998633210
Q ss_pred CCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 043720 1032 GDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQ 1093 (1103)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1093 (1103)
.......... .+..........+.++.+++.+||+.||++||++.|+++
T Consensus 247 ---------~~~i~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 ---------ESNIIRGIFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ---------HHHHHHTCCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---------HHHHhcCCCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 0111111100 011111224466788999999999999999999999986
No 280
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=8.1e-35 Score=350.38 Aligned_cols=268 Identities=24% Similarity=0.360 Sum_probs=206.4
Q ss_pred hcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEec------CCe
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRAS------GNE 892 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 892 (1103)
.++|++.+.||+|+||+||+|.. .+|+.||||++.........+.+.+|+.++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36899999999999999999966 45899999999876666667889999999999999999999998765 677
Q ss_pred EEEEEeecCCCChHHHHHhhcC-CcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCC---EEEeecc
Q 043720 893 MFLIYNYLPGGNLENFIKARTS-RAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFN---AYLSDFG 968 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~ki~Dfg 968 (1103)
.++||||+++|+|.++++.... ..+++..++.++.+++.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 8999999999999999987442 3588999999999999999999999 9999999999999997765 9999999
Q ss_pred cccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcC
Q 043720 969 LSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQG 1048 (1103)
Q Consensus 969 la~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1103)
++....... ......|++.|+|||++.+..++.++||||+|+++|||++|+.||.+... ...|........
T Consensus 170 ~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~-------~~~~~~~i~~~~ 240 (676)
T 3qa8_A 170 YAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ-------PVQWHGKVREKS 240 (676)
T ss_dssp CCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH-------HHHSSTTCC---
T ss_pred ccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc-------hhhhhhhhhccc
Confidence 998764332 23456789999999999999999999999999999999999999975321 011100000000
Q ss_pred ----cccccccc--------cccCCCChhHHHHHHHHHHHccccCCCCCCCHHH-----HHHHHHhhh
Q 043720 1049 ----QVKDVFNA--------ELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQ-----VVQCLKQIQ 1099 (1103)
Q Consensus 1049 ----~~~~~~~~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e-----vl~~L~~i~ 1099 (1103)
...+.... ..........+..+.+++.+|++.||++||+++| +.+.++++.
T Consensus 241 ~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 241 NEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp ---CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred chhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 00000000 0011234557889999999999999999999988 445555553
No 281
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-35 Score=329.41 Aligned_cols=245 Identities=24% Similarity=0.375 Sum_probs=193.6
Q ss_pred HHHhcCCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccchh-----hHHHHHHHHHHHhcC----CCCceeEEEeE
Q 043720 817 IRATGDFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQH-----GVQQFHAEIKTLGNV----RHPNLVTLIGY 886 (1103)
Q Consensus 817 ~~~~~~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l----~h~niv~l~~~ 886 (1103)
....++|++.+.||+|+||+||+|.. .+++.||||++....... ....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457899999999999999999966 468899999997654321 233456788888888 89999999999
Q ss_pred EecCCeEEEEEee-cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC-CCCCEEE
Q 043720 887 RASGNEMFLIYNY-LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD-DDFNAYL 964 (1103)
Q Consensus 887 ~~~~~~~~lV~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~ki 964 (1103)
+...+..++|+|| +.+++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++ .++.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEE
Confidence 9999999999999 78999999998754 489999999999999999999999 999999999999999 8899999
Q ss_pred eecccccccCCCCCccccCCcccccccCccccccCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHH
Q 043720 965 SDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVS-DKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASM 1043 (1103)
Q Consensus 965 ~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1103)
+|||++...... ......|++.|+|||++.+..+. .++||||||+++|||++|+.||... ..
T Consensus 182 ~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~--------------~~ 244 (312)
T 2iwi_A 182 IDFGSGALLHDE---PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD--------------QE 244 (312)
T ss_dssp CCCSSCEECCSS---CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH--------------HH
T ss_pred EEcchhhhcccC---cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh--------------HH
Confidence 999999876432 23345689999999998776654 5899999999999999999998621 00
Q ss_pred HHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1044 LLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
... . ....+...+..+.+++.+||+.||++||+++|++++
T Consensus 245 ~~~-~----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 245 ILE-A----------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHH-T----------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred Hhh-h----------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 110 0 012234456789999999999999999999999974
No 282
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=329.28 Aligned_cols=254 Identities=21% Similarity=0.328 Sum_probs=197.2
Q ss_pred cCCCCcceeccCCcccEEEEEEc-CCcEEEEEEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCe------
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNE------ 892 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 892 (1103)
++|.+.+.||+|+||+||+|... +|+.||||++..... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57899999999999999999764 689999999876433 3345778999999999999999999999987653
Q ss_pred EEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 893 MFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 893 ~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.|+||||++ ++|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 599999996 688887742 389999999999999999999999 999999999999999999999999999976
Q ss_pred cCCCCCccccCCcccccccCcccccc-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhc-Ccc
Q 043720 973 LGTSETHATTGVAGTFGYVAPEYALT-CRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQ-GQV 1050 (1103)
Q Consensus 973 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1050 (1103)
... ......+++.|+|||++.+ ..++.++||||||+++|||++|+.||..... .......... +..
T Consensus 176 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~~~ 243 (353)
T 3coi_A 176 ADA----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--------LDQLTQILKVTGVP 243 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH--------HHHHHHHHHHHCBC
T ss_pred CCC----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHHhCCC
Confidence 532 2334578999999999876 6789999999999999999999999974321 1111111110 000
Q ss_pred -c----c-----------ccc---ccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 -K----D-----------VFN---AELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 -~----~-----------~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
. . .+. ...........+..+.+++.+|++.||++||+++|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0 0 000 000111223557889999999999999999999999865
No 283
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=335.90 Aligned_cols=248 Identities=25% Similarity=0.334 Sum_probs=188.1
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEEEee
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLIYNY 899 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~E~ 899 (1103)
.+|...+.||+|+||+||.....+++.||||++...... .+.+|+.+++++ +|||||++++++.+.+..|+||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 468888999999999977666677999999998654322 356799999999 799999999999999999999999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC-----CCCEEEeecccccccC
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD-----DFNAYLSDFGLSRLLG 974 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~-----~~~~ki~Dfgla~~~~ 974 (1103)
+. |+|.+++..... ...+..+..++.||+.||+|||++ +|+||||||+||+++. ...+||+|||+++...
T Consensus 100 ~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 95 699999986542 344556778999999999999999 9999999999999953 3358899999998764
Q ss_pred CCCC--ccccCCcccccccCccccc---cCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCCCCCCCcchHHHHHHHHhcC
Q 043720 975 TSET--HATTGVAGTFGYVAPEYAL---TCRVSDKADVYSYGVVLLELIS-DKKALDPSFSSHGDGFNIISWASMLLRQG 1048 (1103)
Q Consensus 975 ~~~~--~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1103)
.... .......||+.|+|||++. ...++.++||||+||++|||++ |..||..... ....... ..
T Consensus 175 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---------~~~~~~~-~~ 244 (432)
T 3p23_A 175 VGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---------RQANILL-GA 244 (432)
T ss_dssp -----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---------HHHHHHT-TC
T ss_pred CCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---------HHHHHHh-cc
Confidence 3321 2334567999999999997 4567889999999999999999 8888853211 0011111 11
Q ss_pred cccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 043720 1049 QVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQ 1093 (1103)
Q Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 1093 (1103)
.... ...........+.+++.+||+.||++||+++|+++
T Consensus 245 ~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 CSLD------CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCT------TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCcc------ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 0000 01122345666899999999999999999999985
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.8e-33 Score=325.37 Aligned_cols=154 Identities=21% Similarity=0.155 Sum_probs=136.3
Q ss_pred CCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEec
Q 043720 567 KSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLEL 646 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 646 (1103)
++|++|++++|.++.. |.. ..++|+.|+|++|++++. ..+..+++|++|+|++|++++..|..|..+++|++|+|
T Consensus 205 ~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 279 (390)
T 3o6n_A 205 IAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 279 (390)
T ss_dssp SSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEEC
Confidence 4578888888888854 332 347999999999999953 57999999999999999999888999999999999999
Q ss_pred cCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCccccccccccCCCCCCCCCC
Q 043720 647 SSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNVTTMNCSGVIGNPFLDPCQM 726 (1103)
Q Consensus 647 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~l~~Np~~c~C~~ 726 (1103)
++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++......+..+..+.+.+|||.|+|..
T Consensus 280 ~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~L~~L~l~~N~~~~~~~~ 357 (390)
T 3o6n_A 280 SNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHHTLKNLTLSHNDWDCNSLR 357 (390)
T ss_dssp CSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTCCCSEEECCSSCEEHHHHH
T ss_pred CCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeCchhhccCCEEEcCCCCccchhHH
Confidence 9999995 6777788999999999999999 6777788999999999999999998878888999999999999999865
Q ss_pred C
Q 043720 727 Y 727 (1103)
Q Consensus 727 ~ 727 (1103)
.
T Consensus 358 ~ 358 (390)
T 3o6n_A 358 A 358 (390)
T ss_dssp H
T ss_pred H
Confidence 3
No 285
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.8e-33 Score=311.38 Aligned_cols=231 Identities=13% Similarity=0.080 Sum_probs=186.6
Q ss_pred cCCCCcceeccCCcccEEEEEEcC-CcEEEEEEcccccc--hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEEE
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
++|++.+.||+|+||+||+|.... ++.||||++..... .+..+.+.+|+..+++++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 579999999999999999997754 89999999976543 334578999999999999999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||+++++|.++++.. ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||++++
T Consensus 111 e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~--------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA--------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC---------
T ss_pred EecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc---------
Confidence 999999999999542 34557888999999999999999 99999999999999999999998443
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccccccc
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAE 1057 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1057 (1103)
|++| ++.++||||||+++|||++|+.||........-.. ........
T Consensus 175 ------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~--------------~~~~~~~~ 221 (286)
T 3uqc_A 175 ------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP--------------AERDTAGQ 221 (286)
T ss_dssp ------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE--------------CCBCTTSC
T ss_pred ------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH--------------HHHHhccC
Confidence 3333 57899999999999999999999985433210000 00000000
Q ss_pred c--cCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhhcC
Q 043720 1058 L--WASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQCLKQIQHS 1101 (1103)
Q Consensus 1058 ~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 1101 (1103)
. ........+..+.+++.+||+.||++| |+.|+++.|+++...
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 0 001123456779999999999999999 999999999998654
No 286
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-33 Score=351.04 Aligned_cols=239 Identities=23% Similarity=0.316 Sum_probs=195.6
Q ss_pred cCCCCcceeccCCcccEEEEEEc--CCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCe-----E
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEIS--PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNE-----M 893 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~ 893 (1103)
++|++.+.||+|+||+||+|... +++.||||++.........+.+.+|+.++++++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999775 5899999999766555567789999999999999999999999987654 7
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
|+||||+++++|.+++.. .+++.+++.++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||+++..
T Consensus 160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 999999999999998754 489999999999999999999999 99999999999999986 9999999999876
Q ss_pred CCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCccccc
Q 043720 974 GTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDV 1053 (1103)
Q Consensus 974 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1053 (1103)
... ....||++|+|||++.+.. +.++|||||||++|||++|..||....... .
T Consensus 232 ~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~---------------------~ 284 (681)
T 2pzi_A 232 NSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG---------------------L 284 (681)
T ss_dssp TCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS---------------------C
T ss_pred ccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc---------------------c
Confidence 432 3457899999999987654 889999999999999999988876321100 0
Q ss_pred ccccccCCCChhHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhh
Q 043720 1054 FNAELWASGPHDDLEDMLHLALRCTVETLSTRP-TMKQVVQCLKQI 1098 (1103)
Q Consensus 1054 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i 1098 (1103)
. ........+..+.+++.+||+.||++|| +++++.+.+..+
T Consensus 285 ~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 285 P----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp C----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred c----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 0 0001122346789999999999999999 566666666654
No 287
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.7e-33 Score=342.36 Aligned_cols=313 Identities=20% Similarity=0.174 Sum_probs=240.6
Q ss_pred CcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEec
Q 043720 228 RYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVL 307 (1103)
Q Consensus 228 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 307 (1103)
.+++.|++++|.++...+..++.+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|+.|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 56788888888887555555677888888888888888877778888888888888888888776766777777777666
Q ss_pred ccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCccc
Q 043720 308 SNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVL 387 (1103)
Q Consensus 308 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 387 (1103)
++ |.+.+..+..|+++++|++|+|++|.+
T Consensus 131 ~~---------------------------------------------------n~l~~l~~~~~~~l~~L~~L~Ls~N~l 159 (597)
T 3oja_B 131 ER---------------------------------------------------NDLSSLPRGIFHNTPKLTTLSMSNNNL 159 (597)
T ss_dssp CS---------------------------------------------------SCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred eC---------------------------------------------------CCCCCCCHHHhccCCCCCEEEeeCCcC
Confidence 64 334433334456666677777777777
Q ss_pred ccccchhhhccCCceEeecCCccccccccccccccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchh
Q 043720 388 RGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYM 467 (1103)
Q Consensus 388 ~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (1103)
++.++..|.++++|++|+|++|++++.. ...++.|+.|++++|.+++
T Consensus 160 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~------------------------------- 206 (597)
T 3oja_B 160 ERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLST------------------------------- 206 (597)
T ss_dssp CBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSE-------------------------------
T ss_pred CCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCcccc-------------------------------
Confidence 6666666667777777777776665421 1223344444444443321
Q ss_pred hHHHhhhhcCchhhhhcccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEE
Q 043720 468 QYFMSKARLGMPLLVSAARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVA 547 (1103)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l 547 (1103)
T Consensus 207 -------------------------------------------------------------------------------- 206 (597)
T 3oja_B 207 -------------------------------------------------------------------------------- 206 (597)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCccc
Q 043720 548 NLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNL 627 (1103)
Q Consensus 548 ~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 627 (1103)
. + ...+|++|++++|.++.. +..+ .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+
T Consensus 207 ---------l-~-----~~~~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l 266 (597)
T 3oja_B 207 ---------L-A-----IPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNEL 266 (597)
T ss_dssp ---------E-E-----CCTTCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCC
T ss_pred ---------c-c-----CCchhheeeccCCccccc-cccc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCcc
Confidence 0 0 014688899999998844 3322 3689999999999995 47899999999999999999
Q ss_pred CCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCc
Q 043720 628 TGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNV 707 (1103)
Q Consensus 628 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~ 707 (1103)
++.+|..|+.+++|++|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|++++..+..+
T Consensus 267 ~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 344 (597)
T 3oja_B 267 EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTH 344 (597)
T ss_dssp CEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTT
T ss_pred CCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhc
Confidence 99999999999999999999999995 6777788999999999999999 688888999999999999999999888888
Q ss_pred cccccccccCCCCCCCCCC
Q 043720 708 TTMNCSGVIGNPFLDPCQM 726 (1103)
Q Consensus 708 ~~~~~~~l~~Np~~c~C~~ 726 (1103)
..+..+.+.+|||.|+|..
T Consensus 345 ~~L~~L~l~~N~~~~~~~~ 363 (597)
T 3oja_B 345 HTLKNLTLSHNDWDCNSLR 363 (597)
T ss_dssp CCCSEEECCSSCEEHHHHH
T ss_pred CCCCEEEeeCCCCCChhHH
Confidence 8999999999999999954
No 288
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-33 Score=329.04 Aligned_cols=241 Identities=17% Similarity=0.188 Sum_probs=182.4
Q ss_pred CCCCcceeccCCcccEEEEEE-cCCcEEEEEEcccccch--hhHHHHHHHHHHHhcCCC-Cce----------e-----E
Q 043720 822 DFNTSNCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQ--HGVQQFHAEIKTLGNVRH-PNL----------V-----T 882 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h-~ni----------v-----~ 882 (1103)
.|...+.||+|+||+||+|.+ .+|+.||||++...... ...+.+.+|+.+++.++| ++. + .
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 477788999999999999974 46899999998744332 235779999999999987 211 1 1
Q ss_pred ------EEeEEec-----CCeEEEEEeecCCCChHHHHHh-----hcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCccc
Q 043720 883 ------LIGYRAS-----GNEMFLIYNYLPGGNLENFIKA-----RTSRAVDWKILHKIALDVASALAYLHDQCAPRVLH 946 (1103)
Q Consensus 883 ------l~~~~~~-----~~~~~lV~E~~~~gsL~~~l~~-----~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH 946 (1103)
+..++.. ....+++|+++ +++|.++++. .....+++..+..++.|+++||+|||++ +|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 1111111 22467777776 6899999852 2234588899999999999999999999 9999
Q ss_pred CCCCCCcEEECCCCCEEEeecccccccCCCCCccccCCcccccccCcccc----------ccCCCCCcchhHHHHHHHHH
Q 043720 947 RDVKPSNILLDDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYA----------LTCRVSDKADVYSYGVVLLE 1016 (1103)
Q Consensus 947 ~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~sDvwslGvil~e 1016 (1103)
|||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|||||||++||
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 999999999999999999999998865432 344567 999999999 56668889999999999999
Q ss_pred HHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1017 LISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1017 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
|++|+.||....... .....+. .....+..+.+++.+||+.||++||++.|++++
T Consensus 310 lltg~~Pf~~~~~~~-----------------~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 310 IWCADLPNTDDAALG-----------------GSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHSSCCCCTTGGGS-----------------CSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHCCCCCCCcchhh-----------------hHHHHHh------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 999999997432211 1111111 112345779999999999999999998877543
No 289
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6.4e-33 Score=311.47 Aligned_cols=250 Identities=23% Similarity=0.354 Sum_probs=206.0
Q ss_pred CCCCEEEccCCCCcc--cCCccccCCCCCCEEEeec-CCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCE
Q 043720 107 SELRVLSLPFNGFSG--EFPPEIWSLEKLEVLDVEG-NFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEV 183 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g--~~p~~l~~l~~L~~L~Ls~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (1103)
.+++.|+|++|.++| .+|..++++++|++|+|++ |.+.+.+|..|+.+++|++|+|++|++++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578899999999999 8999999999999999995 9999999999999999999999999999899999999999999
Q ss_pred EEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCcc
Q 043720 184 LNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNM 263 (1103)
Q Consensus 184 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 263 (1103)
|+|++|.+++.+|..++.+++|++|++++|+++|.+|..++...++|++|++++|++++.+|..++.++ |++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 999999999999999999999999999999999889988887654799999999999988898888887 9999999999
Q ss_pred CCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccC
Q 043720 264 LNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSI 343 (1103)
Q Consensus 264 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~i 343 (1103)
+++..|..+..+++|+.|+|++|++++.+|. +..+++|+.|+++
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls----------------------------------- 252 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR----------------------------------- 252 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC-----------------------------------
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc-----------------------------------
Confidence 9888888888889999999999888866554 5666666666665
Q ss_pred chhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCcc
Q 043720 344 PMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNE 410 (1103)
Q Consensus 344 p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~ 410 (1103)
+|.+.+.+|..+..+++|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 253 ----------------~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 253 ----------------NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp ----------------SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ----------------CCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 44455555555555566666666666666555554 556666666666665
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=7.7e-33 Score=309.25 Aligned_cols=227 Identities=20% Similarity=0.282 Sum_probs=180.4
Q ss_pred cCCCCc-ceeccCCcccEEEEEE-cCCcEEEEEEcccccchhhHHHHHHHHHHH-hcCCCCceeEEEeEEec----CCeE
Q 043720 821 GDFNTS-NCIGSGGFGTTYKAEI-SPGILVAVKKLAVGRFQHGVQQFHAEIKTL-GNVRHPNLVTLIGYRAS----GNEM 893 (1103)
Q Consensus 821 ~~~~~~-~~lg~G~fg~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~ 893 (1103)
++|.+. +.||+|+||+||+|.. .+++.||||++... ..+.+|+.++ +..+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 467776 7799999999999976 46899999998642 4566788887 55689999999999876 6788
Q ss_pred EEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECC---CCCEEEeecccc
Q 043720 894 FLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDD---DFNAYLSDFGLS 970 (1103)
Q Consensus 894 ~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~ki~Dfgla 970 (1103)
++||||+++|+|.++++......+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 9999999999999999987666799999999999999999999999 9999999999999998 788999999998
Q ss_pred cccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcc
Q 043720 971 RLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQV 1050 (1103)
Q Consensus 971 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1103)
.... +..++.++||||+|+++|||++|+.||......... . ..
T Consensus 168 ~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-------------~-~~ 210 (299)
T 3m2w_A 168 KETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-------------P-GM 210 (299)
T ss_dssp EECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------C-CS
T ss_pred cccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------------H-HH
Confidence 6542 133567899999999999999999999743221100 0 00
Q ss_pred cccccccccCCCC----hhHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 043720 1051 KDVFNAELWASGP----HDDLEDMLHLALRCTVETLSTRPTMKQVVQC 1094 (1103)
Q Consensus 1051 ~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 1094 (1103)
...+.... ...+ ...+..+.+++.+||+.||++||+++|++++
T Consensus 211 ~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 211 KTRIRMGQ-YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp CCSSCTTC-CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhhcc-ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000000 0111 2356789999999999999999999999974
No 291
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=7e-31 Score=300.13 Aligned_cols=129 Identities=27% Similarity=0.343 Sum_probs=70.9
Q ss_pred ccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCc
Q 043720 127 IWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLR 206 (1103)
Q Consensus 127 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 206 (1103)
+..+++|++|++++|.+. .+|. +..+++|++|+|++|+++ .+|. +.++++|++|++++|.++. ++ .++.+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 445677777777777776 3443 666777777777777776 3343 6666777777777776664 22 455666666
Q ss_pred EeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCC
Q 043720 207 VLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLN 265 (1103)
Q Consensus 207 ~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 265 (1103)
+|++++|+++ .++. + ..+++|++|++++|.....+ ..+..+++|++|++++|.++
T Consensus 114 ~L~l~~n~i~-~~~~-~-~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~ 168 (347)
T 4fmz_A 114 ELYLNEDNIS-DISP-L-ANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVK 168 (347)
T ss_dssp EEECTTSCCC-CCGG-G-TTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCC
T ss_pred EEECcCCccc-Cchh-h-ccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcC
Confidence 6666666655 3333 2 22344444444444332221 12334444444444444433
No 292
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=9.4e-31 Score=299.09 Aligned_cols=126 Identities=28% Similarity=0.447 Sum_probs=89.9
Q ss_pred CCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEec
Q 043720 567 KSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLEL 646 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 646 (1103)
++|++|++++|++++..+ +..+++|++|++++|.+++ + +.+..+++|++|++++|++++. ..+..+++|++|++
T Consensus 221 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEEC
Confidence 567777777777775433 6777777777777777774 3 3577777777777777777743 35677778888888
Q ss_pred cCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCC
Q 043720 647 SSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLS 700 (1103)
Q Consensus 647 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 700 (1103)
++|++++..|..+..+++|+.|+|++|++++..| +..+++|+.|++++|+|+
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 8888777777777777888888888888775555 677778888888877764
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=1.5e-33 Score=320.61 Aligned_cols=245 Identities=16% Similarity=0.173 Sum_probs=186.8
Q ss_pred hcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-------hhhHHHHHHHHHHHhcCC---------CCceeEE
Q 043720 820 TGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-------QHGVQQFHAEIKTLGNVR---------HPNLVTL 883 (1103)
Q Consensus 820 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------h~niv~l 883 (1103)
.++|++.+.||+|+||+||+|.. +|+.||||++..... ....+.+.+|+.++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35689999999999999999987 589999999976532 234577888999888885 8888888
Q ss_pred EeEEe------------------------------cCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHH
Q 043720 884 IGYRA------------------------------SGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASAL 933 (1103)
Q Consensus 884 ~~~~~------------------------------~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL 933 (1103)
.+++. ..+..|+||||+++|++.+.+.+ ..+++.+++.++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 77642 26789999999999977666643 3489999999999999999
Q ss_pred HHHH-hCCCCCcccCCCCCCcEEECCCC--------------------CEEEeecccccccCCCCCccccCCcccccccC
Q 043720 934 AYLH-DQCAPRVLHRDVKPSNILLDDDF--------------------NAYLSDFGLSRLLGTSETHATTGVAGTFGYVA 992 (1103)
Q Consensus 934 ~~LH-~~~~~~ivH~Dlk~~NIll~~~~--------------------~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~a 992 (1103)
+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~a 245 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTC
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccC
Confidence 9999 89 999999999999999887 8999999999876422 3478999999
Q ss_pred ccccccCCCCCcchhHHHHHH-HHHHHhCCCCCCCCCCCCCCCcchHHHHHHHHhcCcccccccccccCCCChhHHHHHH
Q 043720 993 PEYALTCRVSDKADVYSYGVV-LLELISDKKALDPSFSSHGDGFNIISWASMLLRQGQVKDVFNAELWASGPHDDLEDML 1071 (1103)
Q Consensus 993 PE~~~~~~~~~~sDvwslGvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1071 (1103)
||++.+.. +.++||||+|++ .+++++|..||.. ..|.......-..................+.++.
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----------VLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQ 313 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----------HHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHH
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----------hhhhhHHHHhhhhhhccCcccchhhhhhcCHHHH
Confidence 99998766 889999998777 7778888888741 1221111110000000001111112345788899
Q ss_pred HHHHHccccCCCCCCCHHHHH-HH
Q 043720 1072 HLALRCTVETLSTRPTMKQVV-QC 1094 (1103)
Q Consensus 1072 ~li~~cl~~dP~~RPs~~evl-~~ 1094 (1103)
+++.+||+.| |++|++ ++
T Consensus 314 dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHhccC-----CHHHHHhcC
Confidence 9999999976 999988 53
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=6e-31 Score=298.51 Aligned_cols=131 Identities=24% Similarity=0.283 Sum_probs=85.4
Q ss_pred CCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEec
Q 043720 567 KSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLEL 646 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 646 (1103)
++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 45666677777776666666777777777777777777655556677777777777777776 56666677777777777
Q ss_pred cCccccCcChhhhhh------cccccccccccccCc--CCCCccccCCCCCceEeCCCCC
Q 043720 647 SSNSLSGEVPEGVVN------LRNLTALLLDNNKLS--GHLPSGLANVTSLSIFNASFNN 698 (1103)
Q Consensus 647 s~N~l~~~~~~~~~~------l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~l~l~~N~ 698 (1103)
++|+|++..+..|.. ...|+.|++++|++. +..|..|..++.|+.+++++|+
T Consensus 272 ~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 272 HTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 777776555555543 245677777777765 4556666777777777776663
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=6.7e-30 Score=289.71 Aligned_cols=269 Identities=19% Similarity=0.227 Sum_probs=216.1
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
+.|++|+|++|.+++..+..++++++|++|+|++|.+++..|..|+.+++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 57889999999999877778999999999999999999888999999999999999999998 7787765 78999999
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCC--CCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccC
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNG--SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNML 264 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g--~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 264 (1103)
++|++++..+..++++++|++|++++|.++. ..+..+.. +++|++|++++|+++ .+|..+. ++|++|++++|.+
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQG-MKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGG-CTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccC-CCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcC
Confidence 9999998877889999999999999999863 44545544 578999999999998 4666554 7899999999999
Q ss_pred CccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCc
Q 043720 265 NDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIP 344 (1103)
Q Consensus 265 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip 344 (1103)
++..|..+..+++|+.|+|++|++++..+..+..+++|+.|++++| .+. .+|
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N---------------------------~l~-~lp 256 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNN---------------------------KLV-KVP 256 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSS---------------------------CCS-SCC
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCC---------------------------cCc-cCC
Confidence 9888888999999999999999998887778888888888888753 222 566
Q ss_pred hhhhccccccccccCCccccccCCcccccc------ccCcEEEcCCccccc--ccchhhhccCCceEeecCCcc
Q 043720 345 MEITTLSKLRIIWAPRLNLEGKLPSSWGAC------ESLEMLNLAQNVLRG--DLIGVFDRCKKLHFIDLSSNE 410 (1103)
Q Consensus 345 ~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~LdLs~N~ 410 (1103)
..+..+++|+.|++++|.+++..+..|+.. .+|+.|+|++|.+.. ..+..|..+.+|+.++|++|+
T Consensus 257 ~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred hhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 677777777777777777777666666433 667777777777653 556677777777777777764
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.8e-30 Score=292.98 Aligned_cols=268 Identities=22% Similarity=0.250 Sum_probs=217.6
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
++|++|+|++|.+++..|..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 68899999999999877888999999999999999999878899999999999999999998 7787766 79999999
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCC--CCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccC
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNG--SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNML 264 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g--~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 264 (1103)
++|++++..+..|+.+++|++|++++|.++. ..|..+.. + +|++|++++|++++ +|..+. ++|++|++++|.+
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~-l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG-L-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS-C-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC-C-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcC
Confidence 9999997777788999999999999999862 44444443 3 69999999999984 666554 6899999999999
Q ss_pred CccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCc
Q 043720 265 NDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIP 344 (1103)
Q Consensus 265 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip 344 (1103)
++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++ |.+. .+|
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~---------------------------N~l~-~lp 257 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDN---------------------------NKLS-RVP 257 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCS---------------------------SCCC-BCC
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCC---------------------------CcCe-ecC
Confidence 988778889999999999999999888777888888999998875 3333 577
Q ss_pred hhhhccccccccccCCccccccCCcccccc------ccCcEEEcCCcccc--cccchhhhccCCceEeecCCcc
Q 043720 345 MEITTLSKLRIIWAPRLNLEGKLPSSWGAC------ESLEMLNLAQNVLR--GDLIGVFDRCKKLHFIDLSSNE 410 (1103)
Q Consensus 345 ~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l------~~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~LdLs~N~ 410 (1103)
..+..+++|+.|++++|.+++..+..|+.. .+|+.|++++|.+. +..+..|..+++|+.|+|++|+
T Consensus 258 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 258 AGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 777788888888888888887766666553 56778888888776 5667777778888888887774
No 297
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1e-29 Score=288.19 Aligned_cols=290 Identities=21% Similarity=0.202 Sum_probs=248.0
Q ss_pred CCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEE
Q 043720 106 LSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLN 185 (1103)
Q Consensus 106 l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (1103)
..+++.++++++.++ .+|..+. +.|++|+|++|.+++..+..|+.+++|++|+|++|++++..|..++++++|++|+
T Consensus 30 ~c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 30 QCHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EEETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred cCCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 347899999999998 7887665 6899999999999977777899999999999999999988899999999999999
Q ss_pred ccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccc--cccCccccCCCCCCEEeCCCcc
Q 043720 186 LAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLV--GRIPSSLGKCQQLRTLLLFSNM 263 (1103)
Q Consensus 186 L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~ 263 (1103)
+++|+++ .+|..+. ++|++|++++|+++ .++...+..+++|++|++++|.++ +..+..+..+++|++|++++|.
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc
Confidence 9999999 5665554 79999999999999 566555555789999999999996 3678889999999999999999
Q ss_pred CCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccC
Q 043720 264 LNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSI 343 (1103)
Q Consensus 264 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~i 343 (1103)
++. +|..+. ++|+.|++++|++++..|..+..+++|+.|++++ |.+.+..
T Consensus 183 l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~---------------------------n~l~~~~ 232 (330)
T 1xku_A 183 ITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSF---------------------------NSISAVD 232 (330)
T ss_dssp CCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCS---------------------------SCCCEEC
T ss_pred ccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCC---------------------------CcCceeC
Confidence 987 565554 8999999999999998899999999999999985 5566666
Q ss_pred chhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhcc------CCceEeecCCccccc--cc
Q 043720 344 PMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRC------KKLHFIDLSSNELSG--EL 415 (1103)
Q Consensus 344 p~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~LdLs~N~l~~--~~ 415 (1103)
+..+..+++|+.|++++|.+. .+|..+..+++|++|+|++|+|++..+..|... ..|+.|++++|++.. ..
T Consensus 233 ~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~ 311 (330)
T 1xku_A 233 NGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQ 311 (330)
T ss_dssp TTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSC
T ss_pred hhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccC
Confidence 678889999999999999998 788899999999999999999999888888654 789999999999874 22
Q ss_pred -cccccccceeEEEecCCc
Q 043720 416 -DVKLQVPCMALFDVSGNH 433 (1103)
Q Consensus 416 -~~~~~~~~L~~l~ls~N~ 433 (1103)
..+..+..++.+++++|+
T Consensus 312 ~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 312 PSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GGGGTTCCCGGGEEC----
T ss_pred ccccccccceeEEEecccC
Confidence 234467888999999885
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.4e-33 Score=335.89 Aligned_cols=63 Identities=27% Similarity=0.260 Sum_probs=36.1
Q ss_pred CCCCEEEeecCCCCCCcccc-ccCCCCCCEEEccccccCC----CCCCCCCCCCCCCEEEccCCcCCC
Q 043720 131 EKLEVLDVEGNFLSGRLPNE-FVGLRNLRVLNLAFNRIDG----DIPFSLRNFESLEVLNLAGNQVKG 193 (1103)
Q Consensus 131 ~~L~~L~Ls~n~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~n~l~~ 193 (1103)
++|++|||++|+++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.++.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 70 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGD 70 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHH
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCCh
Confidence 35667777777766333222 5566666666666666653 234445555556666666555543
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.3e-33 Score=336.18 Aligned_cols=256 Identities=21% Similarity=0.180 Sum_probs=189.2
Q ss_pred CCCCEEEccCCCCcccCCcc-ccCCCCCCEEEeecCCCCC----CccccccCCCCCCEEEccccccCCCCCCCC-CCCC-
Q 043720 107 SELRVLSLPFNGFSGEFPPE-IWSLEKLEVLDVEGNFLSG----RLPNEFVGLRNLRVLNLAFNRIDGDIPFSL-RNFE- 179 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~-l~~l~~L~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~- 179 (1103)
++|++|+|++|.++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|++++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56889999999998654444 6789999999999999984 467788889999999999999985444333 2344
Q ss_pred ---CCCEEEccCCcCCC----CCChhcccCCCCcEeecccccCCCCCChhHHhh----cCcCcEEECcCCccccc----c
Q 043720 180 ---SLEVLNLAGNQVKG----VIPGFLGSFLKLRVLFLSYNELNGSIPSELGKY----CRYLEHLDLSGNSLVGR----I 244 (1103)
Q Consensus 180 ---~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~----~~~L~~L~L~~N~l~~~----~ 244 (1103)
+|++|+|++|+++. .++..+..+++|++|++++|.+++..+..+... .++|++|+|++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 79999999999984 568889999999999999999986555555543 24699999999998863 3
Q ss_pred CccccCCCCCCEEeCCCccCCcccccccc-----CCCCCCEEEccCCcCCCc----CCccccCCCCCCeEecccCcCccc
Q 043720 245 PSSLGKCQQLRTLLLFSNMLNDVIPRELG-----WLRKLEVLDVSRNRLNGL----IPTELGNCVELSVLVLSNLFDPLL 315 (1103)
Q Consensus 245 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~l~~~~~~~l 315 (1103)
+..+..+++|++|++++|.+++..+..+. ..++|+.|+|++|.+++. ++..+..+++|+.|++++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~------ 236 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGS------ 236 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCS------
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccC------
Confidence 55667778899999999888775444443 256888888888888763 455566666666666664
Q ss_pred cCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccC-----CccccccccCcEEEcCCcccccc
Q 043720 316 SGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKL-----PSSWGACESLEMLNLAQNVLRGD 390 (1103)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~ 390 (1103)
|.+.+.. +..+..+++|++|+|++|++++.
T Consensus 237 ---------------------------------------------n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~ 271 (461)
T 1z7x_W 237 ---------------------------------------------NKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAK 271 (461)
T ss_dssp ---------------------------------------------SBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH
T ss_pred ---------------------------------------------CcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHH
Confidence 3332211 11223467778888888877764
Q ss_pred ----cchhhhccCCceEeecCCccccc
Q 043720 391 ----LIGVFDRCKKLHFIDLSSNELSG 413 (1103)
Q Consensus 391 ----~~~~~~~l~~L~~LdLs~N~l~~ 413 (1103)
++..+..+++|++|+|++|++++
T Consensus 272 ~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 298 (461)
T 1z7x_W 272 GCGDLCRVLRAKESLKELSLAGNELGD 298 (461)
T ss_dssp HHHHHHHHHHHCTTCCEEECTTCCCHH
T ss_pred HHHHHHHHHhhCCCcceEECCCCCCch
Confidence 45666677888888888887753
No 300
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.5e-30 Score=292.04 Aligned_cols=198 Identities=20% Similarity=0.279 Sum_probs=151.7
Q ss_pred CCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEE
Q 043720 105 GLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVL 184 (1103)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (1103)
..+.++.|+|++|.++ .+|+.++++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578899999999998 88999999999999999999999 89999999999999999999999 889999999999999
Q ss_pred EccCCcCCCCCChhccc---------CCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCC
Q 043720 185 NLAGNQVKGVIPGFLGS---------FLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLR 255 (1103)
Q Consensus 185 ~L~~n~l~~~~p~~l~~---------l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 255 (1103)
+|++|++.+.+|..++. +++|++|+|++|+++ .+|..+.. +++|++|+|++|++++ +|..++.+++|+
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~-l~~L~~L~L~~N~l~~-l~~~l~~l~~L~ 232 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIAN-LQNLKSLKIRNSPLSA-LGPAIHHLPKLE 232 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGG-CTTCCEEEEESSCCCC-CCGGGGGCTTCC
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcC-CCCCCEEEccCCCCCc-CchhhccCCCCC
Confidence 99999888888887654 677777777777776 66666554 3556666666666663 455566666666
Q ss_pred EEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecc
Q 043720 256 TLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLS 308 (1103)
Q Consensus 256 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~ 308 (1103)
+|+|++|.+.+.+|..++.+++|+.|+|++|++.+.+|..++++++|+.|+++
T Consensus 233 ~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~ 285 (328)
T 4fcg_A 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLR 285 (328)
T ss_dssp EEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECT
T ss_pred EEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCC
Confidence 66666666666666666666666666666666666666656555555555555
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=288.93 Aligned_cols=267 Identities=20% Similarity=0.221 Sum_probs=195.2
Q ss_pred cCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCC
Q 043720 99 LSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNF 178 (1103)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 178 (1103)
+|..+. ++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..+..+.++
T Consensus 46 iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 123 (353)
T 2z80_A 46 IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPL 123 (353)
T ss_dssp CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTC
T ss_pred cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCC
Confidence 444443 589999999999997666689999999999999999998778889999999999999999995444448899
Q ss_pred CCCCEEEccCCcCCCCCC-hhcccCCCCcEeeccccc-CCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCE
Q 043720 179 ESLEVLNLAGNQVKGVIP-GFLGSFLKLRVLFLSYNE-LNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRT 256 (1103)
Q Consensus 179 ~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~-l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 256 (1103)
++|++|++++|++++..+ ..++.+++|++|++++|+ ++ .++...+..+++|++|++++|++++..|..++.+++|++
T Consensus 124 ~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 202 (353)
T 2z80_A 124 SSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT-KIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSH 202 (353)
T ss_dssp TTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC-EECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred ccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc-ccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCe
Confidence 999999999999995444 478899999999999995 55 554443444688999999999999888999999999999
Q ss_pred EeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccC---CCCCCeEecccCcCccccCccccCcccccccCCCC
Q 043720 257 LLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGN---CVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASN 333 (1103)
Q Consensus 257 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~---l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 333 (1103)
|++++|.++...+..+..+++|+.|++++|++++..+..+.. ...++.+++++
T Consensus 203 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~------------------------ 258 (353)
T 2z80_A 203 LILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRN------------------------ 258 (353)
T ss_dssp EEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEES------------------------
T ss_pred ecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhcccccc------------------------
Confidence 999999997644444566899999999999998765443332 22333333322
Q ss_pred CCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccc
Q 043720 334 GEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSG 413 (1103)
Q Consensus 334 ~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~ 413 (1103)
+.++++.+. .+|..+..+++|++|+|++|+|+..+...|..+++|++|+|++|++++
T Consensus 259 ----------------------~~l~~~~l~-~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 259 ----------------------VKITDESLF-QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp ----------------------CBCCHHHHH-HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ----------------------ccccCcchh-hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 111122211 244555666666666666666665555555666666666666666665
Q ss_pred cc
Q 043720 414 EL 415 (1103)
Q Consensus 414 ~~ 415 (1103)
.+
T Consensus 316 ~~ 317 (353)
T 2z80_A 316 SC 317 (353)
T ss_dssp CH
T ss_pred cC
Confidence 43
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.7e-30 Score=319.68 Aligned_cols=148 Identities=16% Similarity=0.077 Sum_probs=93.3
Q ss_pred EecCCCcccccCCchhhhcCCCccEEECc----CCcCCCC-----CcccccCCCCCCEEEccCC--cCCCCCCcccc-cC
Q 043720 547 ANLSNNNIIGHIPLDIGVMCKSLRVLDAS----HNQISGI-----VPQSLENLTSLVFLDLNGN--KLQGEIPSSLH-RL 614 (1103)
Q Consensus 547 l~ls~n~~~~~ip~~~~~~~~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l 614 (1103)
|+++.|++++..+..+...+++|++|+|+ .|++++. ++..+.++++|+.|+|+++ .+++..+..+. .+
T Consensus 383 L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~ 462 (592)
T 3ogk_B 383 MAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYS 462 (592)
T ss_dssp EEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSC
T ss_pred EEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhC
Confidence 44445555555555555545778888885 6677653 3334566788888888643 35544444443 37
Q ss_pred ccCcEEeccCcccCC-CCCCcccCCCCCcEEeccCccccCc-ChhhhhhcccccccccccccCcCCCCccc-cCCCCCce
Q 043720 615 KYLRHLSLADNNLTG-GIPSSIGELRSLEVLELSSNSLSGE-VPEGVVNLRNLTALLLDNNKLSGHLPSGL-ANVTSLSI 691 (1103)
Q Consensus 615 ~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~ 691 (1103)
++|++|+|++|++++ .++..+.++++|++|+|++|.|++. ++..+..+++|+.|+|++|+++..-...+ ..++.+..
T Consensus 463 ~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~ 542 (592)
T 3ogk_B 463 PNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYWNI 542 (592)
T ss_dssp TTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEE
T ss_pred ccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHHHHHHHHHhCCCcEE
Confidence 778888888888875 3444556778888888888887644 33444577888888888888775433333 34555554
Q ss_pred EeC
Q 043720 692 FNA 694 (1103)
Q Consensus 692 l~l 694 (1103)
..+
T Consensus 543 ~~~ 545 (592)
T 3ogk_B 543 ELI 545 (592)
T ss_dssp EEE
T ss_pred EEe
Confidence 433
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=5.6e-28 Score=270.75 Aligned_cols=258 Identities=22% Similarity=0.221 Sum_probs=192.7
Q ss_pred CCCCEEEccCCCCcccCCc-cccCCCCCCEEEeecCCCC--CCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCE
Q 043720 107 SELRVLSLPFNGFSGEFPP-EIWSLEKLEVLDVEGNFLS--GRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEV 183 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~-~l~~l~~L~~L~Ls~n~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (1103)
++|++|+|++|.++ .+|. .+.++++|++|+|++|.++ +.+|..+..+++|++|+|++|.++ .+|..+.++++|++
T Consensus 28 ~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~ 105 (306)
T 2z66_A 28 SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEH 105 (306)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCE
T ss_pred CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCE
Confidence 57899999999998 4554 4789999999999999988 334777888999999999999998 67778888999999
Q ss_pred EEccCCcCCCCCC-hhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCcccc-ccCccccCCCCCCEEeCCC
Q 043720 184 LNLAGNQVKGVIP-GFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVG-RIPSSLGKCQQLRTLLLFS 261 (1103)
Q Consensus 184 L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~ 261 (1103)
|++++|++++..+ ..+..+++|++|++++|.+++..|..+.. +++|++|++++|.+++ .+|..+..+++|++|++++
T Consensus 106 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~ 184 (306)
T 2z66_A 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG-LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 184 (306)
T ss_dssp EECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT-CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc-CcCCCEEECCCCccccccchhHHhhCcCCCEEECCC
Confidence 9999999886655 57888888888888888888555554443 4678888888888876 5677788888888888888
Q ss_pred ccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccc
Q 043720 262 NMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIG 341 (1103)
Q Consensus 262 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~ 341 (1103)
|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+++
T Consensus 185 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~--------------------------------- 231 (306)
T 2z66_A 185 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS--------------------------------- 231 (306)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECT---------------------------------
T ss_pred CCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECC---------------------------------
Confidence 88887777777788888888888888776555555555555555554
Q ss_pred cCchhhhccccccccccCCccccccCCccccccc-cCcEEEcCCcccccccc--hhhhccCCceEeecCCcccccccccc
Q 043720 342 SIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACE-SLEMLNLAQNVLRGDLI--GVFDRCKKLHFIDLSSNELSGELDVK 418 (1103)
Q Consensus 342 ~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~LdLs~N~l~~~~~~~ 418 (1103)
+|.+.+..|..+..++ +|++|+|++|.+.+... ....-+..++.+.+..+.+.+..|..
T Consensus 232 ------------------~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 293 (306)
T 2z66_A 232 ------------------LNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 293 (306)
T ss_dssp ------------------TSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGG
T ss_pred ------------------CCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchh
Confidence 5566666666777774 78888888888876432 22233445555666677777655543
No 304
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.2e-29 Score=312.07 Aligned_cols=139 Identities=20% Similarity=0.133 Sum_probs=110.1
Q ss_pred hcCCCccEEECcCCcCCCCCcccccC-CCCCCEEEcc----CCcCCCC-----CCcccccCccCcEEeccCc--ccCCCC
Q 043720 564 VMCKSLRVLDASHNQISGIVPQSLEN-LTSLVFLDLN----GNKLQGE-----IPSSLHRLKYLRHLSLADN--NLTGGI 631 (1103)
Q Consensus 564 ~~~~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~~ 631 (1103)
..+++|++|+++.|++++..+..+.. +++|+.|+|+ .|.+++. ++..+..+++|++|+|++| .+++..
T Consensus 375 ~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~ 454 (592)
T 3ogk_B 375 QGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLG 454 (592)
T ss_dssp HHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHH
T ss_pred hhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHH
Confidence 34589999999999999776666765 8999999996 7888853 3334677999999999854 477555
Q ss_pred CCccc-CCCCCcEEeccCccccCc-ChhhhhhcccccccccccccCcCC-CCccccCCCCCceEeCCCCCCCCC
Q 043720 632 PSSIG-ELRSLEVLELSSNSLSGE-VPEGVVNLRNLTALLLDNNKLSGH-LPSGLANVTSLSIFNASFNNLSGP 702 (1103)
Q Consensus 632 p~~~~-~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~l~l~~N~l~~~ 702 (1103)
+..++ .+++|++|+|++|++++. ++..+..+++|+.|+|++|++++. ++..+..+++|+.|++++|+++..
T Consensus 455 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 455 LSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 55554 489999999999999863 455567899999999999998754 344456789999999999998764
No 305
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.8e-27 Score=272.29 Aligned_cols=281 Identities=16% Similarity=0.130 Sum_probs=170.7
Q ss_pred CCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEE
Q 043720 105 GLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVL 184 (1103)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (1103)
.++.....++++++++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..+.++++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 3444455666666666 5565544 366666666666664444456666666666666666665555566666666666
Q ss_pred EccCCcCCCCCChhcccCCCCcEeecccccCCCCCCh-hHHhhcCcCcEEECcCC-ccccccCccccCCCCCCEEeCCCc
Q 043720 185 NLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPS-ELGKYCRYLEHLDLSGN-SLVGRIPSSLGKCQQLRTLLLFSN 262 (1103)
Q Consensus 185 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~-~~~~~~~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N 262 (1103)
+|++|++++..+..|+++++|++|++++|+++ .+|. ..+..+++|++|++++| .+++..+..++.+++|++|++++|
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 66666666444444566666666666666665 4444 22233455555555555 244333445555555555555555
Q ss_pred cCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCccccc
Q 043720 263 MLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGS 342 (1103)
Q Consensus 263 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ 342 (1103)
.+++..|..+..+++|+.|++++|+++...+..+.
T Consensus 185 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~--------------------------------------------- 219 (353)
T 2z80_A 185 DLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVD--------------------------------------------- 219 (353)
T ss_dssp TCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHH---------------------------------------------
T ss_pred CcCccCHHHHhccccCCeecCCCCccccchhhhhh---------------------------------------------
Confidence 55554455555555555555555555422222222
Q ss_pred CchhhhccccccccccCCccccccCCccc---cccccCcEEEcCCccccc----ccchhhhccCCceEeecCCccccccc
Q 043720 343 IPMEITTLSKLRIIWAPRLNLEGKLPSSW---GACESLEMLNLAQNVLRG----DLIGVFDRCKKLHFIDLSSNELSGEL 415 (1103)
Q Consensus 343 ip~~~~~L~~L~~L~l~~n~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~LdLs~N~l~~~~ 415 (1103)
.+++|+.|++++|.+.+..+..+ .....++.++|++|.+.+ .+|..+..+++|++|||++|+++...
T Consensus 220 ------~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~ 293 (353)
T 2z80_A 220 ------VTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVP 293 (353)
T ss_dssp ------HTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCC
T ss_pred ------hcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccC
Confidence 34555555555555555433332 235678888888888876 46778999999999999999999655
Q ss_pred ccc-ccccceeEEEecCCccccccCC
Q 043720 416 DVK-LQVPCMALFDVSGNHMSGSIPR 440 (1103)
Q Consensus 416 ~~~-~~~~~L~~l~ls~N~l~g~ip~ 440 (1103)
+.. ..+++|+.|++++|++.+..|.
T Consensus 294 ~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 294 DGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred HHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 444 5789999999999999986653
No 306
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.8e-27 Score=266.66 Aligned_cols=276 Identities=20% Similarity=0.178 Sum_probs=181.1
Q ss_pred CEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCC--CCCCCCCCCCCCCEEEcc
Q 043720 110 RVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDG--DIPFSLRNFESLEVLNLA 187 (1103)
Q Consensus 110 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~ 187 (1103)
+.+++++++++ .+|..+. ++|++|+|++|.++...+..|..+++|++|+|++|+++. .+|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35677777776 5665443 567777777777773333346777777777777777762 225555666777777777
Q ss_pred CCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCc-
Q 043720 188 GNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLND- 266 (1103)
Q Consensus 188 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~- 266 (1103)
+|.++ .+|..+..+++|++|++++|++++..+...+..+++|++|++++|.+++..+..+..+++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 77776 3555566677777777777776632221222334556666666666665556666666666666666666655
Q ss_pred cccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchh
Q 043720 267 VIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPME 346 (1103)
Q Consensus 267 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~ 346 (1103)
.+|..+..+++|+.|+|++|++++..|..+..+++|+
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~------------------------------------------- 202 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ------------------------------------------- 202 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC-------------------------------------------
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCC-------------------------------------------
Confidence 4555666666666666666666655555555555554
Q ss_pred hhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccC-CceEeecCCccccccccccc---ccc
Q 043720 347 ITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCK-KLHFIDLSSNELSGELDVKL---QVP 422 (1103)
Q Consensus 347 ~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~LdLs~N~l~~~~~~~~---~~~ 422 (1103)
.|++++|.+.+..+..+..+++|+.|+|++|++++..+..+..++ +|++|+|++|++++.....+ -+.
T Consensus 203 --------~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~ 274 (306)
T 2z66_A 203 --------VLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIK 274 (306)
T ss_dssp --------EEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHH
T ss_pred --------EEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHH
Confidence 455555666666666788899999999999999999999999984 99999999999997654321 122
Q ss_pred ceeEEEecCCccccccCC
Q 043720 423 CMALFDVSGNHMSGSIPR 440 (1103)
Q Consensus 423 ~L~~l~ls~N~l~g~ip~ 440 (1103)
..+.+.+..+.+....|.
T Consensus 275 ~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 275 DQRQLLVEVERMECATPS 292 (306)
T ss_dssp HTGGGBSCGGGCBEEESG
T ss_pred hhhhhhccccccccCCch
Confidence 333445566777766665
No 307
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=3.9e-27 Score=285.87 Aligned_cols=261 Identities=25% Similarity=0.268 Sum_probs=141.4
Q ss_pred CCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccC
Q 043720 109 LRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAG 188 (1103)
Q Consensus 109 L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 188 (1103)
++.|++++|+++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 445555555555 4554443 45555555555555 3443 3455555555555555 3443 345555555555
Q ss_pred CcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccc
Q 043720 189 NQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVI 268 (1103)
Q Consensus 189 n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 268 (1103)
|.+++ +|. .+++|+.|++++|+++ .+|.. +++|++|+|++|++++ +|. .+++|+.|++++|.+++ +
T Consensus 111 N~l~~-l~~---~l~~L~~L~L~~N~l~-~lp~~----l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 111 NPLTH-LPA---LPSGLCKLWIFGNQLT-SLPVL----PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp CCCCC-CCC---CCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CcCCC-CCC---CCCCcCEEECCCCCCC-cCCCC----CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 55553 222 3445555555555555 34432 2445555555555552 232 22445555555555554 3
Q ss_pred cccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhh
Q 043720 269 PRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEIT 348 (1103)
Q Consensus 269 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~ 348 (1103)
| ..+++|+.|++++|++++ +|.. +++|+.|++++|.+. .+|.
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~----------------------------~l~~--- 218 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT----------------------------SLPA--- 218 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS----------------------------SCCC---
T ss_pred c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc----------------------------ccCC---
Confidence 3 234555555555555553 2322 245555555532211 1221
Q ss_pred ccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccccccceeEEE
Q 043720 349 TLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPCMALFD 428 (1103)
Q Consensus 349 ~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ 428 (1103)
.+++|+.|++++|.+++ +| ..+++|+.|+|++|+|+..+. .+++|+.|+|++|+|+..++.+..+++|+.|+
T Consensus 219 ~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 219 LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLTRLPESLIHLSSETTVN 290 (622)
T ss_dssp CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEE
T ss_pred CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCCcCCHHHhhccccCEEE
Confidence 12456666666666664 34 345677777777777775443 56777778888887774444455677778888
Q ss_pred ecCCccccccCC
Q 043720 429 VSGNHMSGSIPR 440 (1103)
Q Consensus 429 ls~N~l~g~ip~ 440 (1103)
+++|+++|.+|.
T Consensus 291 L~~N~l~~~~~~ 302 (622)
T 3g06_A 291 LEGNPLSERTLQ 302 (622)
T ss_dssp CCSCCCCHHHHH
T ss_pred ecCCCCCCcCHH
Confidence 888887765553
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=2.2e-26 Score=272.63 Aligned_cols=250 Identities=25% Similarity=0.219 Sum_probs=171.8
Q ss_pred CCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccC
Q 043720 109 LRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAG 188 (1103)
Q Consensus 109 L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 188 (1103)
.+.++.++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456777777776 5666554 5777777777777766677777777777777777777766667777777777777777
Q ss_pred CcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCC-ccccccCccccCCCCCCEEeCCCccCCcc
Q 043720 189 NQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGN-SLVGRIPSSLGKCQQLRTLLLFSNMLNDV 267 (1103)
Q Consensus 189 n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 267 (1103)
|++++..+..|+.+++|++|+|++|+++ .+|...+..+++|++|++++| .++...+..+..+++|++|+|++|.+++.
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 7777666666777777777777777776 555544444566777777663 33333333466666666666666666653
Q ss_pred ccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhh
Q 043720 268 IPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEI 347 (1103)
Q Consensus 268 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~ 347 (1103)
| .+..+++|+.|+|++|++++..|..|.++++|+.|++
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L---------------------------------------- 249 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWV---------------------------------------- 249 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEEC----------------------------------------
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEe----------------------------------------
Confidence 3 3556666666666666666555555555554444444
Q ss_pred hccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccc
Q 043720 348 TTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGEL 415 (1103)
Q Consensus 348 ~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~ 415 (1103)
++|.+.+..|..|.++++|+.|+|++|+|++.++..|..+++|+.|+|++|++....
T Consensus 250 -----------~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 250 -----------MNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp -----------TTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred -----------CCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 455666666777788888888888888888888888888888888888888877543
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.4e-26 Score=254.64 Aligned_cols=252 Identities=21% Similarity=0.222 Sum_probs=148.3
Q ss_pred CEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCC
Q 043720 110 RVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGN 189 (1103)
Q Consensus 110 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 189 (1103)
+.++.++++++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..+.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666666665 455433 346666666666666544455666666666666666666555566666666666666666
Q ss_pred c-CCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccc
Q 043720 190 Q-VKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVI 268 (1103)
Q Consensus 190 ~-l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 268 (1103)
. ++...|..+..+++|++|++++|+++ +..|..+.++++|++|++++|.+++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~-------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQ-------------------------ELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCC-------------------------EECHhHhhCCcCCCEEECCCCcccccC
Confidence 5 55444555555555555555555554 333334444444444444444444443
Q ss_pred cccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhh
Q 043720 269 PRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEIT 348 (1103)
Q Consensus 269 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~ 348 (1103)
+..|..+++|+.|+|++|++++..+..+..+++|+.|+++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~---------------------------------------- 185 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLH---------------------------------------- 185 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC----------------------------------------
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECC----------------------------------------
Confidence 4444455555555555555543333333333333333333
Q ss_pred ccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccccccceeEEE
Q 043720 349 TLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPCMALFD 428 (1103)
Q Consensus 349 ~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ 428 (1103)
+|.+.+..|..|..+++|+.|+|++|++++.++..|..+++|++|+|++|++.+..+..+....++.+.
T Consensus 186 -----------~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~ 254 (285)
T 1ozn_A 186 -----------QNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFR 254 (285)
T ss_dssp -----------SSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCC
T ss_pred -----------CCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcc
Confidence 334444455566667777788888888887777778888888888888888887665544445566666
Q ss_pred ecCCccccccCC
Q 043720 429 VSGNHMSGSIPR 440 (1103)
Q Consensus 429 ls~N~l~g~ip~ 440 (1103)
.+.+.+.+..|.
T Consensus 255 ~~~~~~~c~~p~ 266 (285)
T 1ozn_A 255 GSSSEVPCSLPQ 266 (285)
T ss_dssp SEECCCBEEESG
T ss_pred cccCccccCCch
Confidence 777777777665
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=6.6e-26 Score=268.46 Aligned_cols=237 Identities=20% Similarity=0.129 Sum_probs=207.3
Q ss_pred ccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCC
Q 043720 98 KLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRN 177 (1103)
Q Consensus 98 ~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 177 (1103)
.+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..+.+
T Consensus 68 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 145 (452)
T 3zyi_A 68 EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEY 145 (452)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSS
T ss_pred ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcc
Confidence 4555443 68999999999999999999999999999999999999888899999999999999999999666677999
Q ss_pred CCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEE
Q 043720 178 FESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTL 257 (1103)
Q Consensus 178 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 257 (1103)
+++|++|+|++|+++...+..|.++++|++|++++|+..+.++...+..+++|++|+|++|++++ +| .+..+++|+.|
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 223 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEEL 223 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEE
Confidence 99999999999999987778899999999999999655558888766777899999999999995 44 58899999999
Q ss_pred eCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCC
Q 043720 258 LLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKN 337 (1103)
Q Consensus 258 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n 337 (1103)
+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~---------------------------- 275 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAH---------------------------- 275 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS----------------------------
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCC----------------------------
Confidence 9999999999999999999999999999999988888888877777777764
Q ss_pred cccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCccccc
Q 043720 338 SFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRG 389 (1103)
Q Consensus 338 ~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 389 (1103)
|++++..+..|..+++|+.|+|++|.+..
T Consensus 276 -----------------------N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 276 -----------------------NNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp -----------------------SCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred -----------------------CcCCccChHHhccccCCCEEEccCCCcCC
Confidence 44454555667778888889999888764
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=6.2e-26 Score=267.72 Aligned_cols=250 Identities=26% Similarity=0.274 Sum_probs=168.8
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEcc
Q 043720 108 ELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLA 187 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (1103)
..+.++.++++++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3456777777776 6776654 567777777777776666777777777777777777776556677777777777777
Q ss_pred CCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCc-cccccCccccCCCCCCEEeCCCccCCc
Q 043720 188 GNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNS-LVGRIPSSLGKCQQLRTLLLFSNMLND 266 (1103)
Q Consensus 188 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l~~ 266 (1103)
+|++++..+..|..+++|++|+|++|+++ .+|...+..+++|++|+|++|+ ++...+..+.++++|++|+|++|.++.
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 77777655566777777777777777776 4554444445666666666633 333333356666666666666666654
Q ss_pred cccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchh
Q 043720 267 VIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPME 346 (1103)
Q Consensus 267 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~ 346 (1103)
+| .+..+++|+.|+|++|++++..|..|.++++|+
T Consensus 200 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~------------------------------------------- 234 (440)
T 3zyj_A 200 -IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQ------------------------------------------- 234 (440)
T ss_dssp -CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCC-------------------------------------------
T ss_pred -cc-ccCCCcccCEEECCCCccCccChhhhccCccCC-------------------------------------------
Confidence 23 355566666666666666555455554444444
Q ss_pred hhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCcccccc
Q 043720 347 ITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGE 414 (1103)
Q Consensus 347 ~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ 414 (1103)
.|++++|.+.+..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++...
T Consensus 235 --------~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 235 --------KLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp --------EEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred --------EEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 444445666666777788888888888888888888888888888888888888887653
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.6e-26 Score=254.34 Aligned_cols=211 Identities=23% Similarity=0.260 Sum_probs=188.6
Q ss_pred cccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccc-cCCCCCCCC
Q 043720 97 GKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNR-IDGDIPFSL 175 (1103)
Q Consensus 97 g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l 175 (1103)
..+|..+ .++|++|+|++|.+++..+..+.++++|++|+|++|.+++..|..|..+++|++|+|++|+ +++..|..+
T Consensus 24 ~~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~ 101 (285)
T 1ozn_A 24 QAVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATF 101 (285)
T ss_dssp SSCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTT
T ss_pred ccCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHh
Confidence 4556543 5799999999999998877889999999999999999998889999999999999999997 886668899
Q ss_pred CCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCC
Q 043720 176 RNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLR 255 (1103)
Q Consensus 176 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 255 (1103)
.++++|++|++++|.+++..|..+.++++|++|++++|+++ .+|...+..+++|++|+|++|++++..+..+..+++|+
T Consensus 102 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 180 (285)
T 1ozn_A 102 HGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD 180 (285)
T ss_dssp TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred cCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccc-ccCHhHhccCCCccEEECCCCcccccCHHHhcCccccC
Confidence 99999999999999999988999999999999999999999 56655444568899999999999976667799999999
Q ss_pred EEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccC
Q 043720 256 TLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNL 310 (1103)
Q Consensus 256 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~ 310 (1103)
+|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|
T Consensus 181 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 235 (285)
T 1ozn_A 181 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235 (285)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSS
T ss_pred EEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCC
Confidence 9999999999988999999999999999999999877777889999999999863
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=3e-25 Score=269.26 Aligned_cols=116 Identities=26% Similarity=0.291 Sum_probs=82.9
Q ss_pred CCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeec
Q 043720 131 EKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFL 210 (1103)
Q Consensus 131 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 210 (1103)
.++++|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35889999999999 8888776 89999999999998 6776 56788888888888884 554 5677888888
Q ss_pred ccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCc
Q 043720 211 SYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLND 266 (1103)
Q Consensus 211 ~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 266 (1103)
++|+++ .+|. .+++|+.|++++|++++ +|.. +++|++|+|++|.+++
T Consensus 109 s~N~l~-~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~ 155 (622)
T 3g06_A 109 FSNPLT-HLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS 155 (622)
T ss_dssp CSCCCC-CCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred cCCcCC-CCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC
Confidence 888777 4554 23556677776666663 4432 2455555555555544
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=8.6e-28 Score=269.72 Aligned_cols=182 Identities=23% Similarity=0.237 Sum_probs=95.7
Q ss_pred CCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCC-CCCcccccc-------CCCCCCEEEccccccCCCCCCCC
Q 043720 104 GGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFL-SGRLPNEFV-------GLRNLRVLNLAFNRIDGDIPFSL 175 (1103)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l-~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~l 175 (1103)
+..++|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 4455666666666666 566655543 66666666666 344555554 56666666666666666666654
Q ss_pred --CCCCCCCEEEccCCcCCCCCChhcccC-----CCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccc--cCc
Q 043720 176 --RNFESLEVLNLAGNQVKGVIPGFLGSF-----LKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGR--IPS 246 (1103)
Q Consensus 176 --~~l~~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~--~p~ 246 (1103)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..+.. +++|++|+|++|++++. ++.
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV-FPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC-CSSCCEEECCSCTTCHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc-CCCCCEEECCCCCcCcchHHHH
Confidence 5666666666666666655 5555544 55555555555555333233332 34455555555554433 122
Q ss_pred cc--cCCCCCCEEeCCCccCCcc--cc-ccccCCCCCCEEEccCCcCCCc
Q 043720 247 SL--GKCQQLRTLLLFSNMLNDV--IP-RELGWLRKLEVLDVSRNRLNGL 291 (1103)
Q Consensus 247 ~l--~~l~~L~~L~L~~N~l~~~--~p-~~l~~l~~L~~L~Ls~N~l~~~ 291 (1103)
.+ +.+++|++|+|++|++++. ++ ..+..+++|+.|+|++|++++.
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 243 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDA 243 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSS
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcc
Confidence 22 4444555555555555421 11 2223444455555555544443
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=9.6e-28 Score=269.36 Aligned_cols=250 Identities=20% Similarity=0.134 Sum_probs=180.8
Q ss_pred ccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccC-CCCCCCCC-------CCCCCCEEEccCCcCCCCCChh
Q 043720 127 IWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRID-GDIPFSLR-------NFESLEVLNLAGNQVKGVIPGF 198 (1103)
Q Consensus 127 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~l~-------~l~~L~~L~L~~n~l~~~~p~~ 198 (1103)
++..++|++|++++|.+ .+|..+... |++|+|++|+++ +.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566777888888887 667666544 777788888773 45666555 6778888888888888777776
Q ss_pred c--ccCCCCcEeecccccCCCCCChhHHhhc----CcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcc--ccc
Q 043720 199 L--GSFLKLRVLFLSYNELNGSIPSELGKYC----RYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDV--IPR 270 (1103)
Q Consensus 199 l--~~l~~L~~L~L~~N~l~g~ip~~~~~~~----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p~ 270 (1103)
+ +.+++|++|+|++|++++. |..+.... ++|++|+|++|++++..|..++.+++|++|+|++|++.+. .|.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 7788888888888888754 66665542 6688888888888776667788888888888888887664 233
Q ss_pred cc--cCCCCCCEEEccCCcCCC--cCC-ccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCc-
Q 043720 271 EL--GWLRKLEVLDVSRNRLNG--LIP-TELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIP- 344 (1103)
Q Consensus 271 ~l--~~l~~L~~L~Ls~N~l~~--~~p-~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip- 344 (1103)
.+ ..+++|++|+|++|++++ .++ ..+.++++|+.|++++ |.+.+.+|
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~---------------------------N~l~~~~~~ 246 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSH---------------------------NSLRDAAGA 246 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTT---------------------------SCCCSSCCC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCC---------------------------CcCCcccch
Confidence 44 677888888888888773 222 3345677888888875 44444443
Q ss_pred hhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccc
Q 043720 345 MEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSG 413 (1103)
Q Consensus 345 ~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~ 413 (1103)
..+..+++|+.|++++|.++ .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 247 ~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 247 PSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 33455677888888888877 6666665 7888999999999877 44 8888999999999998875
No 316
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=264.95 Aligned_cols=239 Identities=22% Similarity=0.168 Sum_probs=209.4
Q ss_pred ccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCC
Q 043720 96 VGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSL 175 (1103)
Q Consensus 96 ~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l 175 (1103)
...+|..+. +.++.|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..+
T Consensus 55 l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 132 (440)
T 3zyj_A 55 LREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAF 132 (440)
T ss_dssp CSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTS
T ss_pred cCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHh
Confidence 346777654 789999999999998888999999999999999999998888999999999999999999996666689
Q ss_pred CCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCC
Q 043720 176 RNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLR 255 (1103)
Q Consensus 176 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 255 (1103)
.++++|++|+|++|.++...+..|..+++|++|+|++|+..+.++...+..+++|++|+|++|+++ .+| .+..+++|+
T Consensus 133 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~ 210 (440)
T 3zyj_A 133 VYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLD 210 (440)
T ss_dssp CSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCC
T ss_pred hccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccC
Confidence 999999999999999998878899999999999999966555888877777899999999999999 556 588999999
Q ss_pred EEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCC
Q 043720 256 TLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGE 335 (1103)
Q Consensus 256 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 335 (1103)
.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|.++++|+.|+|++
T Consensus 211 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~-------------------------- 264 (440)
T 3zyj_A 211 ELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAH-------------------------- 264 (440)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTT--------------------------
T ss_pred EEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCC--------------------------
Confidence 999999999998899999999999999999999988888888877777777764
Q ss_pred CCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCccccc
Q 043720 336 KNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRG 389 (1103)
Q Consensus 336 ~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 389 (1103)
|++++..+..|..+++|+.|+|++|.+..
T Consensus 265 -------------------------N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 265 -------------------------NNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp -------------------------SCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred -------------------------CCCCccChhHhccccCCCEEEcCCCCccC
Confidence 44555555667788888888998888763
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=3.9e-27 Score=265.00 Aligned_cols=266 Identities=19% Similarity=0.199 Sum_probs=175.8
Q ss_pred CCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccC
Q 043720 109 LRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAG 188 (1103)
Q Consensus 109 L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 188 (1103)
++.++++.+.+...++..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..| +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 3445555555553333444455667777777777776666667777777777777777764433 66667777777777
Q ss_pred CcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccc
Q 043720 189 NQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVI 268 (1103)
Q Consensus 189 n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 268 (1103)
|++++.. ..++|++|++++|++++. +... +++|++|++++|++++..+..++.+++|++|+|++|.+++..
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~-~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRV-SCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEE-EECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCc-Cccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 7666322 236777777777777633 3221 355777777777777666666777777777777777777766
Q ss_pred ccccc-CCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhh
Q 043720 269 PRELG-WLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEI 347 (1103)
Q Consensus 269 p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~ 347 (1103)
+..+. .+++|++|+|++|++++. + ....+++|+.|++++ |.+. .+|..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~---------------------------N~l~-~l~~~~ 210 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSS---------------------------NKLA-FMGPEF 210 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCS---------------------------SCCC-EECGGG
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCC---------------------------CcCC-cchhhh
Confidence 66553 577777777777777654 2 233467777777764 2232 234456
Q ss_pred hccccccccccCCccccccCCccccccccCcEEEcCCcccc-cccchhhhccCCceEeecCCcc-cccccc
Q 043720 348 TTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLR-GDLIGVFDRCKKLHFIDLSSNE-LSGELD 416 (1103)
Q Consensus 348 ~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~LdLs~N~-l~~~~~ 416 (1103)
..+++|+.|++++|.+. .+|..+..+++|+.|+|++|.+. +..+..+..+++|+.|++++|+ +++..+
T Consensus 211 ~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 211 QSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp GGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred cccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 67777777777777777 45777888888999999999888 7778888888888888888443 555443
No 318
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=3.9e-27 Score=284.20 Aligned_cols=184 Identities=22% Similarity=0.150 Sum_probs=130.7
Q ss_pred eccCCcccEEEE-EEcCCcEEEEEEcccccc---------hhhHHHHHHHHHHHhcC-CCCceeEEEeEEecCCeEEEEE
Q 043720 829 IGSGGFGTTYKA-EISPGILVAVKKLAVGRF---------QHGVQQFHAEIKTLGNV-RHPNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 829 lg~G~fg~V~~~-~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 897 (1103)
.+.|++|.+..+ +..-|+.||||++.+... +...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 566667666655 333488899999976521 23456799999999999 6999999999999999999999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCC
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSE 977 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~ 977 (1103)
||++|++|.+++++... ++.. +|+.||+.||+|+|++ +||||||||+|||++++|.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~~~--l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEE--IDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTTCC--CCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhCCC--CCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999987543 5543 5889999999999999 99999999999999999999999999998764332
Q ss_pred CccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCC
Q 043720 978 THATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKK 1022 (1103)
Q Consensus 978 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~ 1022 (1103)
......+||++|||||++.+ .+..++|+||+|++.+++.++..
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred -ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 23445679999999999876 45678999999999887765543
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.3e-26 Score=258.68 Aligned_cols=112 Identities=21% Similarity=0.258 Sum_probs=94.4
Q ss_pred CCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEec
Q 043720 567 KSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLEL 646 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 646 (1103)
++|++|+|++|+|++. + ....+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|
T Consensus 169 ~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l 244 (317)
T 3o53_A 169 DTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDL 244 (317)
T ss_dssp TTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEEC
T ss_pred CcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEc
Confidence 6788999999998865 3 3345899999999999998 46666999999999999999999 57888999999999999
Q ss_pred cCcccc-CcChhhhhhcccccccccc-cccCcCCCCcc
Q 043720 647 SSNSLS-GEVPEGVVNLRNLTALLLD-NNKLSGHLPSG 682 (1103)
Q Consensus 647 s~N~l~-~~~~~~~~~l~~L~~L~L~-~N~l~~~~p~~ 682 (1103)
++|+++ +.+|..+..+++|+.|+++ .+.+++..|..
T Consensus 245 ~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 245 RGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp TTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred cCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 999998 7788899999999999999 44667665544
No 320
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=7.6e-25 Score=240.31 Aligned_cols=217 Identities=25% Similarity=0.293 Sum_probs=161.4
Q ss_pred CCCceeeeEecCCCCeEEEEecCCCCCCCCCCccccccccccccccccccccceeccCCCccccccCcccCCCCCCCEEE
Q 043720 34 SHCSWFGVSCDSESRVVALNITGGDVSEGNSKPFFSCLMTAQFPFYGFGMRRRTCLHGRGKLVGKLSPLVGGLSELRVLS 113 (1103)
Q Consensus 34 ~~C~W~GV~C~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~l~~L~~L~ 113 (1103)
++|.|.|+.|+-.+.++.+++++..+ ..+|..+. +.|++|+
T Consensus 3 ~~C~~~~~~C~c~~~~~~l~~~~~~l-------------------------------------~~ip~~~~--~~l~~L~ 43 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNNKNSVDCSSKKL-------------------------------------TAIPSNIP--ADTKKLD 43 (270)
T ss_dssp CCBGGGTCSBEEETTTTEEECTTSCC-------------------------------------SSCCSCCC--TTCSEEE
T ss_pred ccCCCCCCCCEeCCCCCEEEccCCCC-------------------------------------CccCCCCC--CCCCEEE
Confidence 68999999997555555566554322 12343332 5688888
Q ss_pred ccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCC
Q 043720 114 LPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKG 193 (1103)
Q Consensus 114 L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 193 (1103)
|++|.+++..+..+.++++|++|+|++|.++...+..|..+++|++|+|++|++++..+..+.++++|++|+|++|++++
T Consensus 44 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 123 (270)
T 2o6q_A 44 LQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS 123 (270)
T ss_dssp CCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCC
T ss_pred CcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCe
Confidence 88888886666678888888888888888885555556788888888888888886555667888888888888888887
Q ss_pred CCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcccccccc
Q 043720 194 VIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELG 273 (1103)
Q Consensus 194 ~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 273 (1103)
..+..|+.+++|++|+|++|+++ .+|...+..+++|++|+|++|++++..+..+..+++|++|+|++|.+++..+..+.
T Consensus 124 ~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 202 (270)
T 2o6q_A 124 LPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFD 202 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred eCHHHhCcCcCCCEEECCCCcCC-ccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhc
Confidence 77777888888888888888887 56655444457788888888888766566677778888888888888776666677
Q ss_pred CCCCCCEEEccCCcCCC
Q 043720 274 WLRKLEVLDVSRNRLNG 290 (1103)
Q Consensus 274 ~l~~L~~L~Ls~N~l~~ 290 (1103)
.+++|+.|+|++|.+..
T Consensus 203 ~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 203 SLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TCTTCCEEECCSSCBCC
T ss_pred cccCCCEEEecCCCeeC
Confidence 77888888888887764
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=7.6e-26 Score=269.40 Aligned_cols=234 Identities=22% Similarity=0.206 Sum_probs=125.0
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEcc
Q 043720 108 ELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLA 187 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (1103)
+|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| ++.+++|++|+|++|.|++ +| ..++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC----CCCCcCEEECc
Confidence 55566666665555555555555555555555555554443 5555555555555555552 22 12455555555
Q ss_pred CCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcc
Q 043720 188 GNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDV 267 (1103)
Q Consensus 188 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 267 (1103)
+|.+++..+. .+++|++|+|++|.++ +..|..++.+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~-------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~ 159 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKIT-------------------------MLRDLDEGCRSRVQYLDLKLNEIDTV 159 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCC-------------------------SGGGBCGGGGSSEEEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCC-------------------------CCCchhhcCCCCCCEEECCCCCCCCc
Confidence 5555543332 2344455555555544 44444444444444444444444444
Q ss_pred cccccc-CCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchh
Q 043720 268 IPRELG-WLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPME 346 (1103)
Q Consensus 268 ~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~ 346 (1103)
.|..+. .+++|+.|+|++|.+++.. .+..+++|+.|+|++ |.+.+ +|..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~--~~~~l~~L~~L~Ls~---------------------------N~l~~-~~~~ 209 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSS---------------------------NKLAF-MGPE 209 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCS---------------------------SCCCE-ECGG
T ss_pred ChHHHhhhCCcccEEecCCCcccccc--ccccCCCCCEEECCC---------------------------CCCCC-CCHh
Confidence 444443 3444555555555444331 122344444444442 22222 2223
Q ss_pred hhccccccccccCCccccccCCccccccccCcEEEcCCcccc-cccchhhhccCCceEeecC
Q 043720 347 ITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLR-GDLIGVFDRCKKLHFIDLS 407 (1103)
Q Consensus 347 ~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~LdLs 407 (1103)
+..+++|+.|++++|.+.+ +|..+..+++|+.|+|++|.+. +.++..+..++.|+.++++
T Consensus 210 ~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 210 FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 4445555555555666664 5666777788888888888887 5666777777788777775
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=9.3e-26 Score=268.61 Aligned_cols=156 Identities=21% Similarity=0.132 Sum_probs=105.3
Q ss_pred CCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccc-cCccCcEEeccCcccCCCCCCcccCCCCCcEEe
Q 043720 567 KSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLH-RLKYLRHLSLADNNLTGGIPSSIGELRSLEVLE 645 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 645 (1103)
++|++|+|++|.|++..|..|..+++|++|+|++|.|++..|..+. .+++|+.|+|++|.|++..+ +..+++|++|+
T Consensus 120 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~ 197 (487)
T 3oja_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLD 197 (487)
T ss_dssp SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEE
T ss_pred CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEE
Confidence 5677777777777776677777777777777777777766666665 67777777777777775422 33577777777
Q ss_pred ccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCC-CCCCCCcc---ccccccc------
Q 043720 646 LSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLS-GPFPWNVT---TMNCSGV------ 715 (1103)
Q Consensus 646 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~-~~~p~~~~---~~~~~~l------ 715 (1103)
|++|.|++..| .+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|++. +.+|..+. .+..+.+
T Consensus 198 Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~ 275 (487)
T 3oja_A 198 LSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKL 275 (487)
T ss_dssp CCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccc
Confidence 77777775433 47777777777777777773 5666777777777777777776 33332222 2222233
Q ss_pred -cCCCCCCCCCC
Q 043720 716 -IGNPFLDPCQM 726 (1103)
Q Consensus 716 -~~Np~~c~C~~ 726 (1103)
.+||+.|.|..
T Consensus 276 ~~~~~~~c~~~~ 287 (487)
T 3oja_A 276 TGQNEEECTVPT 287 (487)
T ss_dssp TSSSSCCCSSTT
T ss_pred cCCCcccccCCc
Confidence 38999999853
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=2.1e-27 Score=292.15 Aligned_cols=258 Identities=18% Similarity=0.208 Sum_probs=149.3
Q ss_pred cCCCCCCCEEEccCCCCcc---cCCcc------------ccCCCCCCEEEeecCCCCCCcccccc-CCCCCCEEEcccc-
Q 043720 103 VGGLSELRVLSLPFNGFSG---EFPPE------------IWSLEKLEVLDVEGNFLSGRLPNEFV-GLRNLRVLNLAFN- 165 (1103)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g---~~p~~------------l~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~Ls~N- 165 (1103)
+..+++|+.|+|+++.... ..|.. ...+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~ 141 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE 141 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCE
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcC
Confidence 4567889999999875321 12211 23577888888888888877776665 6788888888888
Q ss_pred ccCCC-CCCCCCCCCCCCEEEccCCcCCCCCChhcc----cCCCCcEeeccccc--CCCCCChhHHhhcCcCcEEECcCC
Q 043720 166 RIDGD-IPFSLRNFESLEVLNLAGNQVKGVIPGFLG----SFLKLRVLFLSYNE--LNGSIPSELGKYCRYLEHLDLSGN 238 (1103)
Q Consensus 166 ~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~----~l~~L~~L~L~~N~--l~g~ip~~~~~~~~~L~~L~L~~N 238 (1103)
.++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|++++|. ++......+...+++|++|++++|
T Consensus 142 ~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 142 GFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp EEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred CCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 55432 344445778888888888887765544443 55678888888776 221111222223466777777766
Q ss_pred -ccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeE-ecccCcCcccc
Q 043720 239 -SLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVL-VLSNLFDPLLS 316 (1103)
Q Consensus 239 -~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L-~l~~~~~~~l~ 316 (1103)
.+++ ++..+..+++|++|+++.+... ++.|.+.+ ++..+.++++|+.| .+.+
T Consensus 222 ~~~~~-l~~~~~~~~~L~~L~l~~~~~~-----------------~~~~~~~~-l~~~l~~~~~L~~Ls~~~~------- 275 (594)
T 2p1m_B 222 VPLEK-LATLLQRAPQLEELGTGGYTAE-----------------VRPDVYSG-LSVALSGCKELRCLSGFWD------- 275 (594)
T ss_dssp SCHHH-HHHHHHHCTTCSEEECSBCCCC-----------------CCHHHHHH-HHHHHHTCTTCCEEECCBT-------
T ss_pred CcHHH-HHHHHhcCCcceEcccccccCc-----------------cchhhHHH-HHHHHhcCCCcccccCCcc-------
Confidence 3333 5566666666776665443210 11222222 22344455555554 2211
Q ss_pred CccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCC-ccccccccCcEEEcCCcccccccc-hh
Q 043720 317 GRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLP-SSWGACESLEMLNLAQNVLRGDLI-GV 394 (1103)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~-~~ 394 (1103)
...+.+|..+..+++|+.|++++|.+.+... ..+..+++|+.|++++| +.+... ..
T Consensus 276 ---------------------~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l 333 (594)
T 2p1m_B 276 ---------------------AVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVL 333 (594)
T ss_dssp ---------------------CCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHH
T ss_pred ---------------------cchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHH
Confidence 1112334444455666666666666544322 22456777888888777 443322 23
Q ss_pred hhccCCceEeecCC
Q 043720 395 FDRCKKLHFIDLSS 408 (1103)
Q Consensus 395 ~~~l~~L~~LdLs~ 408 (1103)
...+++|+.|+|++
T Consensus 334 ~~~~~~L~~L~L~~ 347 (594)
T 2p1m_B 334 ASTCKDLRELRVFP 347 (594)
T ss_dssp HHHCTTCCEEEEEC
T ss_pred HHhCCCCCEEEEec
Confidence 34577888887744
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=1.7e-26 Score=284.21 Aligned_cols=409 Identities=16% Similarity=0.122 Sum_probs=240.6
Q ss_pred CCCCCCEEEccCCcCCCCCChhcc-cCCCCcEeecccc-cCCCCCChhHHhhcCcCcEEECcCCccccccCcccc----C
Q 043720 177 NFESLEVLNLAGNQVKGVIPGFLG-SFLKLRVLFLSYN-ELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLG----K 250 (1103)
Q Consensus 177 ~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~N-~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~----~ 250 (1103)
.+++|++|+|++|.+++..+..+. .+++|++|+|++| .++......+...+++|++|+|++|.+++..+..+. .
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 456777777777776665555554 5677777777777 444322334444467788888888877654443333 5
Q ss_pred CCCCCEEeCCCcc--CCcc-ccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCccccc
Q 043720 251 CQQLRTLLLFSNM--LNDV-IPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVG 327 (1103)
Q Consensus 251 l~~L~~L~L~~N~--l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~ 327 (1103)
+++|+.|++++|. ++.. ++..+..+++|+.|+|++|...+.+|..+.++++|+.|+++.+...
T Consensus 183 ~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~-------------- 248 (594)
T 2p1m_B 183 YTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAE-------------- 248 (594)
T ss_dssp CCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCC--------------
T ss_pred CCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCc--------------
Confidence 6788889888886 3221 2222345689999999988333337888888999999988643110
Q ss_pred ccCCCCCCCCcccccCchhhhcccccccc-ccCCccccccCCccccccccCcEEEcCCcccccccch-hhhccCCceEee
Q 043720 328 QSDASNGEKNSFIGSIPMEITTLSKLRII-WAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIG-VFDRCKKLHFID 405 (1103)
Q Consensus 328 ~~~~~~~~~n~~~~~ip~~~~~L~~L~~L-~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~Ld 405 (1103)
...+.+ ..++..+.++++|+.| .+.... .+.++..+..+++|++|+|++|.+++.... .+..+++|+.|+
T Consensus 249 ------~~~~~~-~~l~~~l~~~~~L~~Ls~~~~~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~ 320 (594)
T 2p1m_B 249 ------VRPDVY-SGLSVALSGCKELRCLSGFWDAV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLW 320 (594)
T ss_dssp ------CCHHHH-HHHHHHHHTCTTCCEEECCBTCC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEE
T ss_pred ------cchhhH-HHHHHHHhcCCCcccccCCcccc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEe
Confidence 011223 3355678888888888 444332 234555566788999999999987764433 456888999999
Q ss_pred cCCccccc-cccccc-cccceeEEEecCCccccccCCCCcccccccccccccccccccCCCchhhHHHhhhhcCchhhhh
Q 043720 406 LSSNELSG-ELDVKL-QVPCMALFDVSGNHMSGSIPRFDYNVCHQMPLQSSDLCQGYDPSFTYMQYFMSKARLGMPLLVS 483 (1103)
Q Consensus 406 Ls~N~l~~-~~~~~~-~~~~L~~l~ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1103)
+++| ++. .++... .+++|+.|+++++.-.|..
T Consensus 321 l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~--------------------------------------------- 354 (594)
T 2p1m_B 321 VLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVME--------------------------------------------- 354 (594)
T ss_dssp EEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSS---------------------------------------------
T ss_pred CcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccc---------------------------------------------
Confidence 9988 442 222222 4677888887543211100
Q ss_pred cccceEEEecCCCccccccccCCCCccccccccceeeeeccccccccCCcchhhhcccccccEEecCCCcccccCCchhh
Q 043720 484 AARFMVIHNFSGNNFTGPICWLPVAPERLRRRTDYAFLAGANKLTGSFPGSLFQACNEFHGMVANLSNNNIIGHIPLDIG 563 (1103)
Q Consensus 484 ~~~~l~~~~l~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~l~ls~n~~~~~ip~~~~ 563 (1103)
..+.+++ .-...+...|.. ...|+++.|++++..+..+.
T Consensus 355 ----------~~~~l~~-----------------------------~~l~~l~~~~~~--L~~L~~~~~~l~~~~~~~l~ 393 (594)
T 2p1m_B 355 ----------PNVALTE-----------------------------QGLVSVSMGCPK--LESVLYFCRQMTNAALITIA 393 (594)
T ss_dssp ----------CSSCCCH-----------------------------HHHHHHHHHCTT--CCEEEEEESCCCHHHHHHHH
T ss_pred ----------cCCCCCH-----------------------------HHHHHHHHhchh--HHHHHHhcCCcCHHHHHHHH
Confidence 0000000 000000011111 12345556666655555565
Q ss_pred hcCCCccEEECc--C----CcCCCCC-----cccccCCCCCCEEEccCCcCCCCCCccccc-CccCcEEeccCcccCCCC
Q 043720 564 VMCKSLRVLDAS--H----NQISGIV-----PQSLENLTSLVFLDLNGNKLQGEIPSSLHR-LKYLRHLSLADNNLTGGI 631 (1103)
Q Consensus 564 ~~~~~L~~L~L~--~----N~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~ 631 (1103)
..+++|++|+|+ + |.+++.. +..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..
T Consensus 394 ~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~ 472 (594)
T 2p1m_B 394 RNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLG 472 (594)
T ss_dssp HHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHH
T ss_pred hhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHH
Confidence 555778888887 3 5555221 12255667788888866 555444444444 677777888777776544
Q ss_pred CCcc-cCCCCCcEEeccCccccCcChh-hhhhcccccccccccccCcCCCCccc-cCCCCCceEeCC
Q 043720 632 PSSI-GELRSLEVLELSSNSLSGEVPE-GVVNLRNLTALLLDNNKLSGHLPSGL-ANVTSLSIFNAS 695 (1103)
Q Consensus 632 p~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~l~l~ 695 (1103)
+..+ ..+++|++|+|++|.+++.... .+..+++|+.|++++|+++......+ ..++.|+...+.
T Consensus 473 ~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~ 539 (594)
T 2p1m_B 473 MHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVID 539 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEEC
T ss_pred HHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEec
Confidence 4333 4577777778877777543333 33457777777777777743222223 345555554443
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=4.3e-24 Score=236.35 Aligned_cols=140 Identities=31% Similarity=0.382 Sum_probs=108.6
Q ss_pred CCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEec
Q 043720 567 KSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLEL 646 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 646 (1103)
++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 155 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEEC
Confidence 56788888888887 56777788888888888888888666677888888888888888888776777788888888888
Q ss_pred cCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCccccccccccCCCCCCCCCC
Q 043720 647 SSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNVTTMNCSGVIGNPFLDPCQM 726 (1103)
Q Consensus 647 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~l~~Np~~c~C~~ 726 (1103)
++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.+ .+.+|||.|+|++
T Consensus 156 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l---------------------~L~~Np~~C~c~~ 213 (290)
T 1p9a_G 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFA---------------------FLHGNPWLCNCEI 213 (290)
T ss_dssp TTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEE---------------------ECCSCCBCCSGGG
T ss_pred CCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeE---------------------EeCCCCccCcCcc
Confidence 888888665566777888888888888887 666666655566554 5678899999987
Q ss_pred CCC
Q 043720 727 YKD 729 (1103)
Q Consensus 727 ~~~ 729 (1103)
...
T Consensus 214 ~~l 216 (290)
T 1p9a_G 214 LYF 216 (290)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=5.4e-23 Score=226.43 Aligned_cols=228 Identities=22% Similarity=0.281 Sum_probs=127.3
Q ss_pred EEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeeccccc
Q 043720 135 VLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNE 214 (1103)
Q Consensus 135 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~ 214 (1103)
.++.++..++ .+|..+. ++|++|+|++|++++..+..+.++++|++|++++|++++..+..|+.+++|++|+|++|+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 3445555555 5565443 467777777777765555566667777777777777765555566666666666666666
Q ss_pred CCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcc-ccccccCCCCCCEEEccCCcCCCcCC
Q 043720 215 LNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDV-IPRELGWLRKLEVLDVSRNRLNGLIP 293 (1103)
Q Consensus 215 l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p 293 (1103)
+++..+..+.. +++|++|++++|++++..+..++.+++|++|++++|.+++. +|..+..+++|+.|+|++|++++..+
T Consensus 88 l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 88 IQSLALGAFSG-LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCEECTTTTTT-CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCccChhhhcC-CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 66333333332 35566666666666544444555556666666666655552 35555555555555555555554433
Q ss_pred ccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCCccccc
Q 043720 294 TELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGA 373 (1103)
Q Consensus 294 ~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~ 373 (1103)
..+..+++|+.+.+ .|++++|.+.+..+..+..
T Consensus 167 ~~~~~l~~L~~l~l-----------------------------------------------~L~ls~n~l~~~~~~~~~~ 199 (276)
T 2z62_A 167 TDLRVLHQMPLLNL-----------------------------------------------SLDLSLNPMNFIQPGAFKE 199 (276)
T ss_dssp GGGHHHHTCTTCCE-----------------------------------------------EEECCSSCCCEECTTSSCS
T ss_pred HHhhhhhhccccce-----------------------------------------------eeecCCCcccccCccccCC
Confidence 33333333221100 3444455555444333332
Q ss_pred cccCcEEEcCCcccccccchhhhccCCceEeecCCcccccc
Q 043720 374 CESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGE 414 (1103)
Q Consensus 374 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~ 414 (1103)
.+|+.|+|++|++++.++..|..+++|+.|+|++|++++.
T Consensus 200 -~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 200 -IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp -CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred -CcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 3566666666666666555666666666666666666543
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.89 E-value=7.8e-23 Score=225.16 Aligned_cols=202 Identities=22% Similarity=0.218 Sum_probs=177.5
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
+.|++|+|++|.+++..+..+.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 57999999999999877778999999999999999999777778999999999999999999777788999999999999
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCC-CCChhHHhhcCcCcEEECcCCccccccCccccCCCCCC----EEeCCC
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNG-SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLR----TLLLFS 261 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g-~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~L~~ 261 (1103)
++|.+++..+..++.+++|++|++++|++++ .+|..+.. +++|++|+|++|++++..+..+..+++|+ .|++++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSN-LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGG-CTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhcc-CCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 9999998777789999999999999999985 36777766 47899999999999987777888777777 899999
Q ss_pred ccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccC
Q 043720 262 NMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNL 310 (1103)
Q Consensus 262 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~ 310 (1103)
|.+++..+..+. ..+|+.|+|++|++++..+..+.++++|+.|++++|
T Consensus 187 n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N 234 (276)
T 2z62_A 187 NPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 234 (276)
T ss_dssp SCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSS
T ss_pred CcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCC
Confidence 999986555554 458999999999999877777899999999999864
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=9.1e-23 Score=221.12 Aligned_cols=159 Identities=28% Similarity=0.338 Sum_probs=95.7
Q ss_pred CCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecc
Q 043720 132 KLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLS 211 (1103)
Q Consensus 132 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~ 211 (1103)
+|++|+|++|.+++..+..|..+++|++|+|++|++++..|..+.++++|++|+|++|++++..+..|+.+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 45555555555554444455555555555555555554444455555555555555555555444555555556666666
Q ss_pred cccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCc
Q 043720 212 YNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGL 291 (1103)
Q Consensus 212 ~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 291 (1103)
+|+++ .+|...+..+++|++|+|++|++++..+..++.+++|++|+|++|++++..+..+..+++|+.|+|++|++++.
T Consensus 116 ~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 116 GNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 66555 44444333345566666666666655455666777777777777777776666777777777777777777654
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=5.2e-23 Score=225.87 Aligned_cols=212 Identities=23% Similarity=0.242 Sum_probs=183.2
Q ss_pred ccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCC
Q 043720 102 LVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESL 181 (1103)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 181 (1103)
.+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + ..++.+++|++|+|++|++++..+..+.++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 3567899999999999987 343 58899999999999999986 3 478999999999999999997777778999999
Q ss_pred CEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCC
Q 043720 182 EVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFS 261 (1103)
Q Consensus 182 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 261 (1103)
++|+|++|++++..+..|+.+++|++|++++|+++ .+|...+..+++|++|++++|++++..+..++.+++|++|++++
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQ 190 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccC-ccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCC
Confidence 99999999999888888999999999999999999 56655555568899999999999987777789999999999999
Q ss_pred ccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccc
Q 043720 262 NMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIG 341 (1103)
Q Consensus 262 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~ 341 (1103)
|.+++..+..+..+++|+.|+|++|.+.+. +++|+.|++++ |.+.|
T Consensus 191 N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~---------------------------n~~~g 236 (272)
T 3rfs_A 191 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWI---------------------------NKHSG 236 (272)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHH---------------------------HHTGG
T ss_pred CcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHH---------------------------HhCCC
Confidence 999998888899999999999999998854 45678888774 67788
Q ss_pred cCchhhhcccc
Q 043720 342 SIPMEITTLSK 352 (1103)
Q Consensus 342 ~ip~~~~~L~~ 352 (1103)
.+|.+++.++.
T Consensus 237 ~ip~~~~~~~~ 247 (272)
T 3rfs_A 237 VVRNSAGSVAP 247 (272)
T ss_dssp GBBCTTSCBCG
T ss_pred cccCcccccCC
Confidence 88888776654
No 330
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=4e-22 Score=218.59 Aligned_cols=200 Identities=23% Similarity=0.279 Sum_probs=178.8
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEcc
Q 043720 108 ELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLA 187 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (1103)
..+.+++++++++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+++...+..+.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5679999999999 6887765 689999999999997777799999999999999999995555567899999999999
Q ss_pred CCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcc
Q 043720 188 GNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDV 267 (1103)
Q Consensus 188 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 267 (1103)
+|++++..+..|..+++|++|++++|+++ .++...+..+++|++|+|++|++++..+..++.+++|++|+|++|.+++.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999887888999999999999999999 55555555568899999999999976666789999999999999999998
Q ss_pred ccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCc
Q 043720 268 IPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLF 311 (1103)
Q Consensus 268 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~ 311 (1103)
.+..|..+++|+.|+|++|++++..+..+..+++|+.|++++|.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENP 216 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCC
Confidence 78889999999999999999998777789999999999999753
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=6.4e-23 Score=225.13 Aligned_cols=228 Identities=21% Similarity=0.232 Sum_probs=185.7
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
..+..+++..+.+.+.. .+..+++|+.|++++|.++ .++ .+..+++|++|+|++|++++ + ..+.++++|++|++
T Consensus 19 ~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCccccccc--ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEEC
Confidence 44556677777776543 3667899999999999988 444 58899999999999999985 3 47899999999999
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCc
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLND 266 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 266 (1103)
++|.+++..+..|+.+++|++|++++|+++ .+|...+..+++|++|+|++|++++..+..++.+++|++|++++|++++
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 999999888888999999999999999999 5555544456889999999999997777778999999999999999999
Q ss_pred cccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchh
Q 043720 267 VIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPME 346 (1103)
Q Consensus 267 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~ 346 (1103)
..+..+..+++|+.|+|++|++++..|..+..+++|+.|++++ |.+.+.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~---------------------------N~~~~~---- 220 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHD---------------------------NPWDCT---- 220 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS---------------------------SCBCCC----
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccC---------------------------CCcccc----
Confidence 8787889999999999999999988888889999999999985 333322
Q ss_pred hhccccccccccCCccccccCCccccccc
Q 043720 347 ITTLSKLRIIWAPRLNLEGKLPSSWGACE 375 (1103)
Q Consensus 347 ~~~L~~L~~L~l~~n~l~~~~p~~~~~l~ 375 (1103)
+++|+.++++.|.+.|.+|..++.+.
T Consensus 221 ---~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 221 ---CPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp ---TTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred ---CcHHHHHHHHHHhCCCcccCcccccC
Confidence 33566666666666666666665544
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=3.1e-24 Score=246.17 Aligned_cols=180 Identities=23% Similarity=0.172 Sum_probs=107.4
Q ss_pred EEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCcc----ccccCCC-CCCEEEccccccCCCCCCCCCCC-----CC
Q 043720 111 VLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLP----NEFVGLR-NLRVLNLAFNRIDGDIPFSLRNF-----ES 180 (1103)
Q Consensus 111 ~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 180 (1103)
+++|+.|+++|.+|..+...++|++|||++|.+++..+ ..+..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35667777777777666666667777777777775555 5566666 67777777777776555555553 67
Q ss_pred CCEEEccCCcCCCCCChhccc----C-CCCcEeecccccCCCCCChhHHhh----cCcCcEEECcCCcccccc----Ccc
Q 043720 181 LEVLNLAGNQVKGVIPGFLGS----F-LKLRVLFLSYNELNGSIPSELGKY----CRYLEHLDLSGNSLVGRI----PSS 247 (1103)
Q Consensus 181 L~~L~L~~n~l~~~~p~~l~~----l-~~L~~L~L~~N~l~g~ip~~~~~~----~~~L~~L~L~~N~l~~~~----p~~ 247 (1103)
|++|+|++|++++..+..++. + ++|++|+|++|++++..+..+... +++|++|+|++|++++.. +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 777777777776655554333 2 667777777777764444444332 245666666666665322 223
Q ss_pred ccCCC-CCCEEeCCCccCCcccccccc----CC-CCCCEEEccCCcCCC
Q 043720 248 LGKCQ-QLRTLLLFSNMLNDVIPRELG----WL-RKLEVLDVSRNRLNG 290 (1103)
Q Consensus 248 l~~l~-~L~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~Ls~N~l~~ 290 (1103)
+..++ +|++|+|++|++++..+..++ .+ ++|+.|+|++|++++
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 33343 566666666666554443332 22 356666666665553
No 333
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=3e-24 Score=257.67 Aligned_cols=186 Identities=18% Similarity=0.223 Sum_probs=146.2
Q ss_pred CCcceeccCCcccEEEEEEcCCcEEEEEEcccccc-------hhhHHHHHHHHHHHhcCCCCceeEEEeEEecCCeEEEE
Q 043720 824 NTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRF-------QHGVQQFHAEIKTLGNVRHPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 824 ~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lV 896 (1103)
...+.||+|+||+||+|... ++.+++|+...... ....+.+.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 44678999999999999544 78899998644322 11245689999999999999999655555566777999
Q ss_pred EeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCC
Q 043720 897 YNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTS 976 (1103)
Q Consensus 897 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~ 976 (1103)
|||+++++|.++++. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999865 557999999999999999 9999999999999999 9999999999987543
Q ss_pred CCcc------ccCCcccccccCcccccc--CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 043720 977 ETHA------TTGVAGTFGYVAPEYALT--CRVSDKADVYSYGVVLLELISDKKALD 1025 (1103)
Q Consensus 977 ~~~~------~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslGvil~elltg~~p~~ 1025 (1103)
.... .....||+.|+|||++.. ..|+.++|+|+..+-..+.+.++.+|.
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 2221 235679999999999986 567788999999999999888876653
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=3.3e-22 Score=221.23 Aligned_cols=202 Identities=23% Similarity=0.255 Sum_probs=179.2
Q ss_pred ccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCC
Q 043720 102 LVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESL 181 (1103)
Q Consensus 102 ~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 181 (1103)
.++++++++.+++++++++ .+|..+. +++++|+|++|.+++..|..|..+++|++|+|++|++++ ++.. +.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcC
Confidence 3678899999999999998 7887775 789999999999998888999999999999999999994 4443 789999
Q ss_pred CEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCC
Q 043720 182 EVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFS 261 (1103)
Q Consensus 182 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 261 (1103)
++|+|++|+++ .+|..+..+++|++|+|++|+++ .+|...+..+++|++|+|++|++++..+..+..+++|+.|+|++
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 99999999999 67888899999999999999999 66655455568899999999999977777789999999999999
Q ss_pred ccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCc
Q 043720 262 NMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLF 311 (1103)
Q Consensus 262 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~ 311 (1103)
|++++..+..|..+++|+.|+|++|+++ .+|..+..+.+|+.|++++|.
T Consensus 158 N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np 206 (290)
T 1p9a_G 158 NNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNP 206 (290)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCC
T ss_pred CcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCC
Confidence 9999877777889999999999999999 778888899999999998753
No 335
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=1.2e-24 Score=252.25 Aligned_cols=243 Identities=19% Similarity=0.280 Sum_probs=131.1
Q ss_pred cCCccccCCCCCCEEEeecCCCCCCc----cccccCCCCCCEEEcccc---ccCCCCCCCC-------CCCCCCCEEEcc
Q 043720 122 EFPPEIWSLEKLEVLDVEGNFLSGRL----PNEFVGLRNLRVLNLAFN---RIDGDIPFSL-------RNFESLEVLNLA 187 (1103)
Q Consensus 122 ~~p~~l~~l~~L~~L~Ls~n~l~~~~----p~~l~~l~~L~~L~Ls~N---~l~~~~p~~l-------~~l~~L~~L~L~ 187 (1103)
.++..+..+++|++|+|++|.+++.. +..+..+++|++|+|++| ++++.+|..+ .++++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 34444555555555555555555432 223445556666666553 3333444433 455666666666
Q ss_pred CCcCCC----CCChhcccCCCCcEeecccccCCCCCChhHHhhc------------CcCcEEECcCCccc-cccC---cc
Q 043720 188 GNQVKG----VIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYC------------RYLEHLDLSGNSLV-GRIP---SS 247 (1103)
Q Consensus 188 ~n~l~~----~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~------------~~L~~L~L~~N~l~-~~~p---~~ 247 (1103)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+...+ ++|++|+|++|+++ +.++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 666665 3455556666666666666666533333333221 45666666666654 2233 24
Q ss_pred ccCCCCCCEEeCCCccCCc-----cccccccCCCCCCEEEccCCcCC----CcCCccccCCCCCCeEecccCcCccccCc
Q 043720 248 LGKCQQLRTLLLFSNMLND-----VIPRELGWLRKLEVLDVSRNRLN----GLIPTELGNCVELSVLVLSNLFDPLLSGR 318 (1103)
Q Consensus 248 l~~l~~L~~L~L~~N~l~~-----~~p~~l~~l~~L~~L~Ls~N~l~----~~~p~~l~~l~~L~~L~l~~~~~~~l~~~ 318 (1103)
+..+++|++|+|++|.++. ..|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|+
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~---------- 252 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN---------- 252 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECT----------
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECC----------
Confidence 4455566666666666552 22335555566666666666654 3344444444444444444
Q ss_pred cccCcccccccCCCCCCCCcccccCchhhhccccccccccCCcccccc----CCccc--cccccCcEEEcCCccccc---
Q 043720 319 NIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGK----LPSSW--GACESLEMLNLAQNVLRG--- 389 (1103)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~--- 389 (1103)
+|.+.+. ++..+ +.+++|+.|+|++|.|++
T Consensus 253 -----------------------------------------~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~ 291 (386)
T 2ca6_A 253 -----------------------------------------DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV 291 (386)
T ss_dssp -----------------------------------------TCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHH
T ss_pred -----------------------------------------CCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHH
Confidence 3333332 23334 236677777777777776
Q ss_pred -ccchhh-hccCCceEeecCCccccccc
Q 043720 390 -DLIGVF-DRCKKLHFIDLSSNELSGEL 415 (1103)
Q Consensus 390 -~~~~~~-~~l~~L~~LdLs~N~l~~~~ 415 (1103)
.++..+ .++++|++|+|++|++++..
T Consensus 292 ~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 292 RTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 355544 55677777777777777655
No 336
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=9.2e-22 Score=213.17 Aligned_cols=182 Identities=22% Similarity=0.256 Sum_probs=164.8
Q ss_pred cEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccC
Q 043720 545 MVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLAD 624 (1103)
Q Consensus 545 ~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 624 (1103)
..++++++++. .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 17 ~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 17 KEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp TEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred eEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 46899999998 8888776 6899999999999999899999999999999999999988888899999999999999
Q ss_pred cccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCC
Q 043720 625 NNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFP 704 (1103)
Q Consensus 625 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 704 (1103)
|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++++.++
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 99998888889999999999999999998777778999999999999999997777789999999999999999999887
Q ss_pred CCc---cccccccccCCCCCCC-CCCCCCC
Q 043720 705 WNV---TTMNCSGVIGNPFLDP-CQMYKDI 730 (1103)
Q Consensus 705 ~~~---~~~~~~~l~~Np~~c~-C~~~~~~ 730 (1103)
..+ ..+..+.+.+|||.|+ |++....
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~ 202 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSRCEILYLS 202 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTSTTHHHHH
T ss_pred HHHhCCCCCCEEEeeCCceeCCccccHHHH
Confidence 544 4667778999999999 8875533
No 337
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.3e-23 Score=236.59 Aligned_cols=201 Identities=21% Similarity=0.242 Sum_probs=155.4
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCC-ccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEE
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGR-LPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLN 185 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (1103)
+.++.|++++|.+.+..|. +..+++|++|+|++|.+++. +|..+..+++|++|+|++|++++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 6888999999998877665 66789999999999988865 888888899999999999988877888888889999999
Q ss_pred ccCC-cCCCC-CChhcccCCCCcEeecccc-cCCCC-CChhHHhhcC-cCcEEECcCC--ccc-cccCccccCCCCCCEE
Q 043720 186 LAGN-QVKGV-IPGFLGSFLKLRVLFLSYN-ELNGS-IPSELGKYCR-YLEHLDLSGN--SLV-GRIPSSLGKCQQLRTL 257 (1103)
Q Consensus 186 L~~n-~l~~~-~p~~l~~l~~L~~L~L~~N-~l~g~-ip~~~~~~~~-~L~~L~L~~N--~l~-~~~p~~l~~l~~L~~L 257 (1103)
|++| .+++. ++..+.++++|++|++++| .+++. ++..+.. ++ +|++|++++| .++ +.++..+..+++|++|
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~-l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L 227 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAH-VSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 227 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHH-SCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHh-cccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEE
Confidence 9988 67753 6666788888889998888 88754 4544544 46 7888888888 455 4566677778888888
Q ss_pred eCCCcc-CCccccccccCCCCCCEEEccCCc-CCCcCCccccCCCCCCeEeccc
Q 043720 258 LLFSNM-LNDVIPRELGWLRKLEVLDVSRNR-LNGLIPTELGNCVELSVLVLSN 309 (1103)
Q Consensus 258 ~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~l~~ 309 (1103)
++++|. +++..+..+..+++|+.|++++|. +.......++++++|+.|++++
T Consensus 228 ~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~ 281 (336)
T 2ast_B 228 DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFG 281 (336)
T ss_dssp ECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTT
T ss_pred eCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccC
Confidence 888888 676667778888888888888884 3322223566777777777764
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=6.1e-22 Score=221.90 Aligned_cols=202 Identities=26% Similarity=0.235 Sum_probs=173.9
Q ss_pred CCCCCCEEEccCCCCcccCCccc--cCCCCCCEEEeecCCCCCCcc----ccccCCCCCCEEEccccccCCCCCCCCCCC
Q 043720 105 GLSELRVLSLPFNGFSGEFPPEI--WSLEKLEVLDVEGNFLSGRLP----NEFVGLRNLRVLNLAFNRIDGDIPFSLRNF 178 (1103)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~p~~l--~~l~~L~~L~Ls~n~l~~~~p----~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 178 (1103)
.+++|++|+|++|.+++.+|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|+|++|++++..|..++++
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 34679999999999999999998 899999999999999997655 455689999999999999998888999999
Q ss_pred CCCCEEEccCCcCCCC--C--ChhcccCCCCcEeecccccCCCCCChh---HHhhcCcCcEEECcCCccccccCccccCC
Q 043720 179 ESLEVLNLAGNQVKGV--I--PGFLGSFLKLRVLFLSYNELNGSIPSE---LGKYCRYLEHLDLSGNSLVGRIPSSLGKC 251 (1103)
Q Consensus 179 ~~L~~L~L~~n~l~~~--~--p~~l~~l~~L~~L~L~~N~l~g~ip~~---~~~~~~~L~~L~L~~N~l~~~~p~~l~~l 251 (1103)
++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .++.. ++..+++|++|+|++|++++..|..++.+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 9999999999998753 2 233578999999999999997 55543 44456889999999999998888888877
Q ss_pred ---CCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcC
Q 043720 252 ---QQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFD 312 (1103)
Q Consensus 252 ---~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~ 312 (1103)
++|++|+|++|+++. +|..+. ++|+.|+|++|++++. |. +..+++|+.|++++|..
T Consensus 248 ~~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l 306 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPF 306 (310)
T ss_dssp CCCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTT
T ss_pred cCcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCC
Confidence 699999999999995 677764 8999999999999975 43 68889999999997643
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1e-21 Score=211.15 Aligned_cols=197 Identities=18% Similarity=0.184 Sum_probs=169.4
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCC-CCCCccccccCCCCCCEEEccc-cccCCCCCCCCCCCCCCCEE
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNF-LSGRLPNEFVGLRNLRVLNLAF-NRIDGDIPFSLRNFESLEVL 184 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L 184 (1103)
+.|++|+|++|++++..+..+.++++|++|+|++|. +++..+..|..+++|++|+|++ |++++..+..+.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 379999999999997777789999999999999997 8865666899999999999999 99996666789999999999
Q ss_pred EccCCcCCCCCChhcccCCCCc---Eeecccc-cCCCCCChhHHhhcCcCc-EEECcCCccccccCccccCCCCCCEEeC
Q 043720 185 NLAGNQVKGVIPGFLGSFLKLR---VLFLSYN-ELNGSIPSELGKYCRYLE-HLDLSGNSLVGRIPSSLGKCQQLRTLLL 259 (1103)
Q Consensus 185 ~L~~n~l~~~~p~~l~~l~~L~---~L~L~~N-~l~g~ip~~~~~~~~~L~-~L~L~~N~l~~~~p~~l~~l~~L~~L~L 259 (1103)
++++|++++ +|. ++.+++|+ +|++++| +++ .+|...+..+++|+ +|++++|+++ .+|......++|+.|++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~-~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L 186 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMT-SIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYL 186 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCC-EECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEEC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchh-hcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEc
Confidence 999999996 666 88888888 9999999 998 66766555578899 9999999999 56655444489999999
Q ss_pred CCcc-CCccccccccCC-CCCCEEEccCCcCCCcCCccccCCCCCCeEecccC
Q 043720 260 FSNM-LNDVIPRELGWL-RKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNL 310 (1103)
Q Consensus 260 ~~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~ 310 (1103)
++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 9995 998777889999 9999999999999954 444 6788999999864
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=6.5e-23 Score=235.10 Aligned_cols=175 Identities=22% Similarity=0.126 Sum_probs=135.7
Q ss_pred EEEeecCCCCCCccccccCCCCCCEEEccccccCCCCC----CCCCCCC-CCCEEEccCCcCCCCCChhcccC-----CC
Q 043720 135 VLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIP----FSLRNFE-SLEVLNLAGNQVKGVIPGFLGSF-----LK 204 (1103)
Q Consensus 135 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p----~~l~~l~-~L~~L~L~~n~l~~~~p~~l~~l-----~~ 204 (1103)
.++|+.|.++|.+|..+...++|++|+|++|++++..+ ..+.+++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999999999888888889999999999996655 6777888 89999999999998877777765 89
Q ss_pred CcEeecccccCCCCCChhHHhhc----CcCcEEECcCCccccccCcccc----C-CCCCCEEeCCCccCCcc----cccc
Q 043720 205 LRVLFLSYNELNGSIPSELGKYC----RYLEHLDLSGNSLVGRIPSSLG----K-CQQLRTLLLFSNMLNDV----IPRE 271 (1103)
Q Consensus 205 L~~L~L~~N~l~g~ip~~~~~~~----~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~L~~N~l~~~----~p~~ 271 (1103)
|++|+|++|++++..+..++..+ ++|++|+|++|++++..+..++ . .++|++|+|++|.+++. ++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999877776665542 6799999999999866554443 3 35899999999988864 3444
Q ss_pred ccCCC-CCCEEEccCCcCCCcCCccccC----C-CCCCeEeccc
Q 043720 272 LGWLR-KLEVLDVSRNRLNGLIPTELGN----C-VELSVLVLSN 309 (1103)
Q Consensus 272 l~~l~-~L~~L~Ls~N~l~~~~p~~l~~----l-~~L~~L~l~~ 309 (1103)
+..++ +|+.|+|++|++++..+..+.. + ++|+.|+|++
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~ 205 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSA 205 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTT
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCC
Confidence 55555 8888999888888766554443 3 4677777764
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=2.1e-23 Score=241.71 Aligned_cols=247 Identities=19% Similarity=0.237 Sum_probs=168.3
Q ss_pred CccccccCCCCCCEEEccccccCCC----CCCCCCCCCCCCEEEccCC---cCCCCCChhc-------ccCCCCcEeecc
Q 043720 146 RLPNEFVGLRNLRVLNLAFNRIDGD----IPFSLRNFESLEVLNLAGN---QVKGVIPGFL-------GSFLKLRVLFLS 211 (1103)
Q Consensus 146 ~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~n---~l~~~~p~~l-------~~l~~L~~L~L~ 211 (1103)
.++..+..+++|++|+|++|++++. ++..+.++++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 4666777788888888888888755 3345777888888888885 4445555544 567778888888
Q ss_pred cccCCC----CCChhHHhhcCcCcEEECcCCccccccCcccc----CC---------CCCCEEeCCCccCC-cccc---c
Q 043720 212 YNELNG----SIPSELGKYCRYLEHLDLSGNSLVGRIPSSLG----KC---------QQLRTLLLFSNMLN-DVIP---R 270 (1103)
Q Consensus 212 ~N~l~g----~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~L~~N~l~-~~~p---~ 270 (1103)
+|.+++ .+|..+.. +++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.++ .
T Consensus 103 ~n~l~~~~~~~l~~~l~~-~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSK-HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp SCCCCTTTHHHHHHHHHH-CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHh-CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 887775 25555544 46677777777777643333333 23 66777777777766 2233 3
Q ss_pred cccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhcc
Q 043720 271 ELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTL 350 (1103)
Q Consensus 271 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L 350 (1103)
.+..+++|+.|+|++|+++.. .....+|..+..+
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~----------------------------------------------g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPE----------------------------------------------GIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHH----------------------------------------------HHHHHHHTTGGGC
T ss_pred HHHhCCCcCEEECcCCCCCHh----------------------------------------------HHHHHHHHHhhcC
Confidence 455666677777766666521 0000122234445
Q ss_pred ccccccccCCcccc----ccCCccccccccCcEEEcCCcccccc----cchhhhc--cCCceEeecCCccccc----ccc
Q 043720 351 SKLRIIWAPRLNLE----GKLPSSWGACESLEMLNLAQNVLRGD----LIGVFDR--CKKLHFIDLSSNELSG----ELD 416 (1103)
Q Consensus 351 ~~L~~L~l~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~--l~~L~~LdLs~N~l~~----~~~ 416 (1103)
++|+.|++++|.++ +.+|..+..+++|+.|+|++|.|++. ++..+.. +++|+.|+|++|++++ .++
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 55555555566664 45667788899999999999999986 4566643 8999999999999998 355
Q ss_pred ccc--cccceeEEEecCCccccccC
Q 043720 417 VKL--QVPCMALFDVSGNHMSGSIP 439 (1103)
Q Consensus 417 ~~~--~~~~L~~l~ls~N~l~g~ip 439 (1103)
... ++++|+.|++++|++++..+
T Consensus 296 ~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHhcCCCceEEEccCCcCCcchh
Confidence 443 47999999999999998764
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=6.8e-23 Score=232.66 Aligned_cols=198 Identities=19% Similarity=0.167 Sum_probs=151.6
Q ss_pred CCCEEEccCCCCcccCCccccCC--CCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCC-CCCCCCCCCCCCEE
Q 043720 108 ELRVLSLPFNGFSGEFPPEIWSL--EKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGD-IPFSLRNFESLEVL 184 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~l~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L 184 (1103)
.++.|+++++.+. |..+..+ ++++.|++++|.+++..+. +..+++|++|+|++|.+++. +|..+.++++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3678888888776 5566666 8888899988888866555 55788888888888888755 77778888888888
Q ss_pred EccCCcCCCCCChhcccCCCCcEeecccc-cCCCC-CChhHHhhcCcCcEEECcCC-ccccc-cCccccCCC-CCCEEeC
Q 043720 185 NLAGNQVKGVIPGFLGSFLKLRVLFLSYN-ELNGS-IPSELGKYCRYLEHLDLSGN-SLVGR-IPSSLGKCQ-QLRTLLL 259 (1103)
Q Consensus 185 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N-~l~g~-ip~~~~~~~~~L~~L~L~~N-~l~~~-~p~~l~~l~-~L~~L~L 259 (1103)
+|++|.+++..+..++.+++|++|++++| .+++. ++..+. .+++|++|++++| .+++. ++..+..++ +|++|++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~-~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l 202 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS-SCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNL 202 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH-HCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEEC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHh-cCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEe
Confidence 88888888777888888888888888888 67653 444343 4577888888888 88754 566677788 8888888
Q ss_pred CCc--cCC-ccccccccCCCCCCEEEccCCc-CCCcCCccccCCCCCCeEecccC
Q 043720 260 FSN--MLN-DVIPRELGWLRKLEVLDVSRNR-LNGLIPTELGNCVELSVLVLSNL 310 (1103)
Q Consensus 260 ~~N--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~l~~~ 310 (1103)
++| .++ +.+|..+..+++|+.|++++|. +++..+..+.++++|+.|++++|
T Consensus 203 ~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 203 SGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp CSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred CCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 888 555 3466677778888888888888 66666777777777777777753
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=4.6e-22 Score=222.90 Aligned_cols=180 Identities=19% Similarity=0.134 Sum_probs=102.6
Q ss_pred CCCEEEccCCCCcccCCcc---ccCCCCCCEEEeecCCCCCCccccc--cCCCCCCEEEccccccCCCCC----CCCCCC
Q 043720 108 ELRVLSLPFNGFSGEFPPE---IWSLEKLEVLDVEGNFLSGRLPNEF--VGLRNLRVLNLAFNRIDGDIP----FSLRNF 178 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~---l~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~l~~l 178 (1103)
.++.|.+.++.++...-.. ...+++|++|+|++|.+++..|..+ ..+++|++|+|++|++++..| ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4666677666654221111 1124557777777777776666666 667777777777777765444 233456
Q ss_pred CCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEe
Q 043720 179 ESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLL 258 (1103)
Q Consensus 179 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 258 (1103)
++|++|+|++|++++..+..|+.+++|++|+|++|++.+... + ..+..++.+++|++|+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~-------------------~~~~~~~~l~~L~~L~ 203 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERG--L-------------------MAALCPHKFPAIQNLA 203 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHH--H-------------------HTTSCTTSSCCCCSCB
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchh--h-------------------hHHHhhhcCCCCCEEE
Confidence 666666666666666555666666666666666666542100 0 0112234566666666
Q ss_pred CCCccCCcc--ccc-cccCCCCCCEEEccCCcCCCcCCccccCC---CCCCeEecc
Q 043720 259 LFSNMLNDV--IPR-ELGWLRKLEVLDVSRNRLNGLIPTELGNC---VELSVLVLS 308 (1103)
Q Consensus 259 L~~N~l~~~--~p~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~l~ 308 (1103)
|++|+++.. .+. .+..+++|++|+|++|++++..|..+..+ ++|+.|+++
T Consensus 204 Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls 259 (310)
T 4glp_A 204 LRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLS 259 (310)
T ss_dssp CCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECC
T ss_pred CCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECC
Confidence 766666532 111 24566777777777777776666665554 344444444
No 344
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=5.1e-22 Score=227.39 Aligned_cols=180 Identities=23% Similarity=0.262 Sum_probs=158.5
Q ss_pred cEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCccccc-CCCCCCEEEccCCcCCCCCCcccccCccCcEEecc
Q 043720 545 MVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLE-NLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLA 623 (1103)
Q Consensus 545 ~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 623 (1103)
..+++++|++. .+|..+. +.++.|+|++|+|+++.+..|. ++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 47899999998 6898776 5689999999999988888888 99999999999999997777889999999999999
Q ss_pred CcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccc---cCCCCCceEeCCCCCCC
Q 043720 624 DNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGL---ANVTSLSIFNASFNNLS 700 (1103)
Q Consensus 624 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~l~l~~N~l~ 700 (1103)
+|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|++++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998888889999999999999999998889999999999999999999996555555 57999999999999999
Q ss_pred CCCCCCcccc-----ccccccCCCCCCCCCCCC
Q 043720 701 GPFPWNVTTM-----NCSGVIGNPFLDPCQMYK 728 (1103)
Q Consensus 701 ~~~p~~~~~~-----~~~~l~~Np~~c~C~~~~ 728 (1103)
+.++..+..+ ..+.+.+|||.|||++..
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~ 209 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQ 209 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCcHH
Confidence 8776544433 557899999999999754
No 345
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=6.4e-22 Score=237.05 Aligned_cols=215 Identities=24% Similarity=0.265 Sum_probs=177.4
Q ss_pred CCCCcccCcCCCCCCCC-----ceeee-EecCCCCeEEEEecCCCCCCCCCCccccccccccccccccccccceeccCCC
Q 043720 20 DPSGILSSWQTNTSSHC-----SWFGV-SCDSESRVVALNITGGDVSEGNSKPFFSCLMTAQFPFYGFGMRRRTCLHGRG 93 (1103)
Q Consensus 20 d~~~~l~sW~~~~~~~C-----~W~GV-~C~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (1103)
+....+.+|..+ .++| .|.|+ .|. .++++.+++++..+
T Consensus 28 ~~~~~l~~W~~~-~~~~~~~~~~~~~l~~C~-~~~L~~L~Ls~n~L---------------------------------- 71 (571)
T 3cvr_A 28 DYFSAWDKWEKQ-ALPGENRNEAVSLLKECL-INQFSELQLNRLNL---------------------------------- 71 (571)
T ss_dssp HHHHHHHHHHTT-CCTTCCHHHHHHHHHHHH-HTTCSEEECCSSCC----------------------------------
T ss_pred hHHHHHHHHhcc-CCccccccchhhhccccc-cCCccEEEeCCCCC----------------------------------
Confidence 334457889754 4678 79999 786 35788888876432
Q ss_pred ccccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCC
Q 043720 94 KLVGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPF 173 (1103)
Q Consensus 94 ~~~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 173 (1103)
.+ +|+.+ +++|++|+|++|.|+ .+| ..+++|++|+|++|.|++ +|. +.. +|++|+|++|+|++ +|.
T Consensus 72 --~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~ 137 (571)
T 3cvr_A 72 --SS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE 137 (571)
T ss_dssp --SC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC
T ss_pred --Cc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC
Confidence 22 55555 378999999999999 788 557999999999999996 887 765 99999999999996 777
Q ss_pred CCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCC
Q 043720 174 SLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQ 253 (1103)
Q Consensus 174 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~ 253 (1103)
.+++|++|+|++|++++ +|. .+++|++|+|++|++++ +|. +. ++|++|+|++|+|+ .+|. +.. +
T Consensus 138 ---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~---~~L~~L~Ls~N~L~-~lp~-~~~--~ 201 (571)
T 3cvr_A 138 ---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP---ESLEALDVSTNLLE-SLPA-VPV--R 201 (571)
T ss_dssp ---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC---TTCCEEECCSSCCS-SCCC-CC----
T ss_pred ---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh---CCCCEEECcCCCCC-chhh-HHH--h
Confidence 68999999999999996 665 57899999999999994 887 44 78999999999999 6777 655 7
Q ss_pred C-------CEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCC
Q 043720 254 L-------RTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVE 301 (1103)
Q Consensus 254 L-------~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 301 (1103)
| +.|+|++|+|+. +|..+..+++|+.|+|++|++++.+|..+..++.
T Consensus 202 L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 202 NHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp ------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 7 999999999986 7888888999999999999999999998887654
No 346
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=4.6e-21 Score=202.87 Aligned_cols=159 Identities=23% Similarity=0.344 Sum_probs=137.6
Q ss_pred cEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccC
Q 043720 545 MVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLAD 624 (1103)
Q Consensus 545 ~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 624 (1103)
..+++++|++. .+|..+. ++|++|+|++|+|+++.+..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 46889999887 7888766 6799999999999988888899999999999999999977788999999999999999
Q ss_pred cccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCC
Q 043720 625 NNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFP 704 (1103)
Q Consensus 625 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p 704 (1103)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~----------- 158 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMH----------- 158 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE-----------
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEE-----------
Confidence 999976666788899999999999999988888899999999999999999877777788888877764
Q ss_pred CCccccccccccCCCCCCCCCCCC
Q 043720 705 WNVTTMNCSGVIGNPFLDPCQMYK 728 (1103)
Q Consensus 705 ~~~~~~~~~~l~~Np~~c~C~~~~ 728 (1103)
+.+|||.|||++..
T Consensus 159 ----------L~~N~~~c~c~l~~ 172 (220)
T 2v9t_B 159 ----------LAQNPFICDCHLKW 172 (220)
T ss_dssp ----------CCSSCEECSGGGHH
T ss_pred ----------eCCCCcCCCCccHH
Confidence 56789999999754
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=1.5e-20 Score=210.04 Aligned_cols=193 Identities=22% Similarity=0.330 Sum_probs=168.3
Q ss_pred cCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCC
Q 043720 103 VGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLE 182 (1103)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 182 (1103)
.+++++|++|++++|.++ .+| .+..+++|++|+|++|.+++. +. +..+++|++|+|++|++++ ++ .+.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 457889999999999998 466 689999999999999999954 44 9999999999999999995 44 789999999
Q ss_pred EEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCc
Q 043720 183 VLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSN 262 (1103)
Q Consensus 183 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 262 (1103)
+|++++|++++. +. ++.+++|++|++++|+++ .++. +. .+++|++|+|++|++++. +. +..+++|+.|++++|
T Consensus 111 ~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~-~~~~-l~-~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 111 TLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQIT-NISP-LA-GLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDN 183 (308)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCGG-GG-GCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSS
T ss_pred EEECCCCCCCCc-hh-hcCCCCCCEEECCCCccC-cCcc-cc-CCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCC
Confidence 999999999964 43 899999999999999998 5554 44 468899999999999964 43 899999999999999
Q ss_pred cCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcC
Q 043720 263 MLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFD 312 (1103)
Q Consensus 263 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~ 312 (1103)
.+++..+ +..+++|+.|+|++|++++.. .+..+++|+.|++++|..
T Consensus 184 ~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 184 KISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTI 229 (308)
T ss_dssp CCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEE
T ss_pred ccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCee
Confidence 9998544 899999999999999999765 389999999999997543
No 348
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.3e-20 Score=197.87 Aligned_cols=164 Identities=23% Similarity=0.226 Sum_probs=125.5
Q ss_pred CCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEE
Q 043720 106 LSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLN 185 (1103)
Q Consensus 106 l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (1103)
.++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+.++++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 35788999999999866666678889999999999999866666678889999999999988865556678888888888
Q ss_pred ccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCC
Q 043720 186 LAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLN 265 (1103)
Q Consensus 186 L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 265 (1103)
+++|++++..+..|..+++|++|++++|+++ .+|...+..+++|++|++++|.+.+. +++|++|+++.|+++
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~ 178 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHS 178 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCT
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccc-eeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCC
Confidence 8888888777777788888888888888887 45555444456777777777766532 446677777777777
Q ss_pred ccccccccCCCC
Q 043720 266 DVIPRELGWLRK 277 (1103)
Q Consensus 266 ~~~p~~l~~l~~ 277 (1103)
|.+|.+++.++.
T Consensus 179 g~ip~~~~~l~~ 190 (208)
T 2o6s_A 179 GVVRNSAGSVAP 190 (208)
T ss_dssp TTBBCTTSSBCT
T ss_pred ceeeccCccccC
Confidence 777766665544
No 349
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.83 E-value=9.5e-21 Score=203.58 Aligned_cols=183 Identities=16% Similarity=0.207 Sum_probs=150.8
Q ss_pred CcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccc-cCCCCCCCCCCCCCCCEEEccC-CcCCCCCC
Q 043720 119 FSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNR-IDGDIPFSLRNFESLEVLNLAG-NQVKGVIP 196 (1103)
Q Consensus 119 l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~-n~l~~~~p 196 (1103)
++ .+|. +. ++|++|+|++|++++..+..|..+++|++|+|++|+ +++..+..+.++++|++|++++ |++++..+
T Consensus 23 l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 23 IQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp CS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred cc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 44 6776 44 489999999999997667789999999999999997 8855566899999999999998 99998777
Q ss_pred hhcccCCCCcEeecccccCCCCCChhHHhhcCcCc---EEECcCC-ccccccCccccCCCCCC-EEeCCCccCCcccccc
Q 043720 197 GFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLE---HLDLSGN-SLVGRIPSSLGKCQQLR-TLLLFSNMLNDVIPRE 271 (1103)
Q Consensus 197 ~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~L~~N~l~~~~p~~ 271 (1103)
..|.++++|++|++++|+++ .+|. +. .+++|+ +|++++| ++++..+..+..+++|+ +|++++|+++...+..
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~-~lp~-~~-~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~ 175 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLK-MFPD-LT-KVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYA 175 (239)
T ss_dssp TSEECCTTCCEEEEEEECCC-SCCC-CT-TCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTT
T ss_pred HHhCCCCCCCEEeCCCCCCc-cccc-cc-cccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhh
Confidence 88999999999999999998 5886 43 457788 9999999 89876667788999999 9999999998544444
Q ss_pred ccCCCCCCEEEccCCc-CCCcCCccccCC-CCCCeEeccc
Q 043720 272 LGWLRKLEVLDVSRNR-LNGLIPTELGNC-VELSVLVLSN 309 (1103)
Q Consensus 272 l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l-~~L~~L~l~~ 309 (1103)
+.. ++|+.|+|++|+ +++..+..|..+ ++|+.|++++
T Consensus 176 ~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~ 214 (239)
T 2xwt_C 176 FNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQ 214 (239)
T ss_dssp TTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTT
T ss_pred cCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCC
Confidence 444 889999999995 886666777777 7777777764
No 350
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.83 E-value=2.5e-20 Score=208.23 Aligned_cols=164 Identities=23% Similarity=0.305 Sum_probs=105.6
Q ss_pred EEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcC
Q 043720 112 LSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQV 191 (1103)
Q Consensus 112 L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l 191 (1103)
+.+..+.+++.++ +.++++|++|++++|.++ .+| .+..+++|++|+|++|++++ ++. +.++++|++|+|++|++
T Consensus 24 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcC
Confidence 3445555554332 456778888888888887 455 57778888888888888874 444 77888888888888887
Q ss_pred CCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcccccc
Q 043720 192 KGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRE 271 (1103)
Q Consensus 192 ~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 271 (1103)
++. + .++.+++|++|++++|+++ .++. +. .+++|++|++++|++++..+ ++.+++|++|++++|.+++..+
T Consensus 98 ~~~-~-~~~~l~~L~~L~l~~n~l~-~~~~-l~-~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-- 168 (308)
T 1h6u_A 98 KNV-S-AIAGLQSIKTLDLTSTQIT-DVTP-LA-GLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-- 168 (308)
T ss_dssp SCC-G-GGTTCTTCCEEECTTSCCC-CCGG-GT-TCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred CCc-h-hhcCCCCCCEEECCCCCCC-Cchh-hc-CCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--
Confidence 753 3 5677777777777777776 3443 32 34556666666666664322 5556666666666666655322
Q ss_pred ccCCCCCCEEEccCCcCCC
Q 043720 272 LGWLRKLEVLDVSRNRLNG 290 (1103)
Q Consensus 272 l~~l~~L~~L~Ls~N~l~~ 290 (1103)
+..+++|+.|++++|++++
T Consensus 169 l~~l~~L~~L~l~~n~l~~ 187 (308)
T 1h6u_A 169 LANLSKLTTLKADDNKISD 187 (308)
T ss_dssp GTTCTTCCEEECCSSCCCC
T ss_pred hcCCCCCCEEECCCCccCc
Confidence 5555666666666655553
No 351
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=8.5e-21 Score=200.79 Aligned_cols=160 Identities=21% Similarity=0.284 Sum_probs=132.9
Q ss_pred cEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCc-ccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEecc
Q 043720 545 MVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVP-QSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLA 623 (1103)
Q Consensus 545 ~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 623 (1103)
..+++++|++. .+|..+. ..+++|+|++|+|+++.+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 14 ~~l~~s~n~l~-~iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEeEeCCCCcc-cCccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 47889998887 6887765 457899999999987744 457888999999999999987777788889999999999
Q ss_pred CcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCC
Q 043720 624 DNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPF 703 (1103)
Q Consensus 624 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~ 703 (1103)
+|++++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~---------- 159 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLN---------- 159 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEE----------
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEE----------
Confidence 9999877777788889999999999999887788888888899999999988877788888888887764
Q ss_pred CCCccccccccccCCCCCCCCCCCCC
Q 043720 704 PWNVTTMNCSGVIGNPFLDPCQMYKD 729 (1103)
Q Consensus 704 p~~~~~~~~~~l~~Np~~c~C~~~~~ 729 (1103)
+.+|||.|+|++...
T Consensus 160 -----------L~~N~l~c~c~l~~l 174 (220)
T 2v70_A 160 -----------LLANPFNCNCYLAWL 174 (220)
T ss_dssp -----------CCSCCEECSGGGHHH
T ss_pred -----------ecCcCCcCCCchHHH
Confidence 557789999987553
No 352
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=3.3e-20 Score=211.40 Aligned_cols=196 Identities=18% Similarity=0.086 Sum_probs=156.1
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccc-cccCCCCCCE-EEccccccCCCCCCCCCCCCCCCEE
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPN-EFVGLRNLRV-LNLAFNRIDGDIPFSLRNFESLEVL 184 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~-L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (1103)
+++++|+|++|+|+..-+.+|.++++|++|+|++|.+.+.+|. .|.++++|++ +.++.|++++..|..|.++++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 5789999999999954445789999999999999999877764 6788988875 6677899997778889999999999
Q ss_pred EccCCcCCCCCChhcccCCCCcEeeccc-ccCCCCCChhHHh-hcCcCcEEECcCCccccccCccccCCCCCCEEeCCC-
Q 043720 185 NLAGNQVKGVIPGFLGSFLKLRVLFLSY-NELNGSIPSELGK-YCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFS- 261 (1103)
Q Consensus 185 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~-N~l~g~ip~~~~~-~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~- 261 (1103)
++++|++++..+..+....++..|++.+ |++. .+|...+. ....++.|+|++|+++ .+|.......+|+.|++.+
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~-~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~ 187 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIH-TIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDN 187 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCC-EECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTC
T ss_pred cccccccccCCchhhcccchhhhhhhccccccc-cccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccC
Confidence 9999999987777777788899999976 5666 66655433 3346899999999999 5666666678899999975
Q ss_pred ccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEec
Q 043720 262 NMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVL 307 (1103)
Q Consensus 262 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l 307 (1103)
|.++.+.++.|..+++|++|||++|+|+...+..+. +|+.|.+
T Consensus 188 n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~ 230 (350)
T 4ay9_X 188 NNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRA 230 (350)
T ss_dssp TTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEEC
T ss_pred CcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhh
Confidence 677765556789999999999999999955444444 4444444
No 353
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=8.3e-21 Score=208.52 Aligned_cols=152 Identities=13% Similarity=0.113 Sum_probs=120.9
Q ss_pred HHHHHhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccch-----------------hhHHHHHHHHHHHhcCCC
Q 043720 815 SIIRATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQ-----------------HGVQQFHAEIKTLGNVRH 877 (1103)
Q Consensus 815 ~~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~h 877 (1103)
.+......|.+.+.||+|+||.||+|...+|+.||||+++..... .....+.+|+.++++++|
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 344445567788999999999999998877999999999654321 135678999999999984
Q ss_pred CceeEEEeEEecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC
Q 043720 878 PNLVTLIGYRASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD 957 (1103)
Q Consensus 878 ~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~ 957 (1103)
+++.+++.. +..|+||||+++++|.+ +.. .....++.|++.||+|||+. +|+||||||+||+++
T Consensus 164 ---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~ 227 (282)
T 1zar_A 164 ---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS 227 (282)
T ss_dssp ---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred ---CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE
Confidence 555554433 45699999999999988 421 23446999999999999999 999999999999999
Q ss_pred CCCCEEEeecccccccCCCCCccccCCcccccccCccccc
Q 043720 958 DDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYAL 997 (1103)
Q Consensus 958 ~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~ 997 (1103)
++.+||+|||+++. +..|+|||++.
T Consensus 228 -~~~vkl~DFG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 228 -EEGIWIIDFPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp -TTEEEECCCTTCEE--------------TTSTTHHHHHH
T ss_pred -CCcEEEEECCCCeE--------------CCCCCHHHHHH
Confidence 99999999999863 33578899874
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.1e-19 Score=193.71 Aligned_cols=156 Identities=28% Similarity=0.379 Sum_probs=134.1
Q ss_pred ccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEecc
Q 043720 544 GMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLA 623 (1103)
Q Consensus 544 ~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 623 (1103)
...++++++++. .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|+...+..|..+++|+.|+|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcC-ccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 346889888886 8888776 789999999999998889999999999999999999986556678899999999999
Q ss_pred CcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCC
Q 043720 624 DNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPF 703 (1103)
Q Consensus 624 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~ 703 (1103)
+|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..+..+++|+.|+
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~---------- 165 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAY---------- 165 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE----------
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEE----------
Confidence 99999777777889999999999999998 6788889999999999999999876667788888888774
Q ss_pred CCCccccccccccCCCCCCCCC
Q 043720 704 PWNVTTMNCSGVIGNPFLDPCQ 725 (1103)
Q Consensus 704 p~~~~~~~~~~l~~Np~~c~C~ 725 (1103)
+.+|||.|+|.
T Consensus 166 -----------l~~N~~~c~c~ 176 (229)
T 3e6j_A 166 -----------LFGNPWDCECR 176 (229)
T ss_dssp -----------CTTSCBCTTBG
T ss_pred -----------eeCCCccCCcc
Confidence 55778889996
No 355
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=1.6e-19 Score=216.27 Aligned_cols=189 Identities=24% Similarity=0.331 Sum_probs=164.6
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEcc
Q 043720 108 ELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLA 187 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (1103)
+|+.|+|++|++++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999996 888774 89999999999999 788 558999999999999996 888 766 99999999
Q ss_pred CCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcc
Q 043720 188 GNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDV 267 (1103)
Q Consensus 188 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 267 (1103)
+|++++ +|. .+++|++|+|++|+++ .+|. .+++|++|+|++|++++ +|. +. ++|+.|+|++|.|+.
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~- 194 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLT-MLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLES- 194 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSS-
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccC-cCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCc-
Confidence 999997 666 6899999999999999 4887 35789999999999996 777 66 899999999999995
Q ss_pred ccccccCCCCC-------CEEEccCCcCCCcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCccc
Q 043720 268 IPRELGWLRKL-------EVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFI 340 (1103)
Q Consensus 268 ~p~~l~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~ 340 (1103)
+|. +.. +| +.|+|++|+|+ .+|..+.++++|+.|+|++ |.+.
T Consensus 195 lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~---------------------------N~l~ 243 (571)
T 3cvr_A 195 LPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILED---------------------------NPLS 243 (571)
T ss_dssp CCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCS---------------------------SSCC
T ss_pred hhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeC---------------------------CcCC
Confidence 666 654 77 99999999999 5799899999999999985 7788
Q ss_pred ccCchhhhcccc
Q 043720 341 GSIPMEITTLSK 352 (1103)
Q Consensus 341 ~~ip~~~~~L~~ 352 (1103)
+.+|..+..++.
T Consensus 244 ~~~p~~l~~l~~ 255 (571)
T 3cvr_A 244 SRIRESLSQQTA 255 (571)
T ss_dssp HHHHHHHHHHHH
T ss_pred CcCHHHHHHhhc
Confidence 888888877654
No 356
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.81 E-value=4.7e-20 Score=210.15 Aligned_cols=241 Identities=15% Similarity=0.092 Sum_probs=153.8
Q ss_pred CEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCC-hhcccCCCCcE-eecc
Q 043720 134 EVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIP-GFLGSFLKLRV-LFLS 211 (1103)
Q Consensus 134 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~-L~L~ 211 (1103)
++++.++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 67888888888 777766 3678888888888883333467888888888888888766555 45677777664 4555
Q ss_pred cccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCC-ccCCccccccccCCC-CCCEEEccCCcCC
Q 043720 212 YNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFS-NMLNDVIPRELGWLR-KLEVLDVSRNRLN 289 (1103)
Q Consensus 212 ~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~ 289 (1103)
.|+++ .+++..+..+++|++|++++|++++..+..+....++..|++.+ |.++...+..|..+. .++.|+|++|+|+
T Consensus 89 ~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 89 ANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp ETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred CCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 67776 55544444456677777777777655455555556666666644 455554445555543 4666667666666
Q ss_pred CcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCC-
Q 043720 290 GLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLP- 368 (1103)
Q Consensus 290 ~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p- 368 (1103)
. +|...... .+|+.+++.+++..+.+|
T Consensus 168 ~-i~~~~f~~---------------------------------------------------~~L~~l~l~~~n~l~~i~~ 195 (350)
T 4ay9_X 168 E-IHNSAFNG---------------------------------------------------TQLDELNLSDNNNLEELPN 195 (350)
T ss_dssp E-ECTTSSTT---------------------------------------------------EEEEEEECTTCTTCCCCCT
T ss_pred C-CChhhccc---------------------------------------------------cchhHHhhccCCcccCCCH
Confidence 3 33332233 344445554433333343
Q ss_pred ccccccccCcEEEcCCcccccccchhhhccCCceEeecCCccccccccccccccceeEEEecCCc
Q 043720 369 SSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSNELSGELDVKLQVPCMALFDVSGNH 433 (1103)
Q Consensus 369 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N~l~~~~~~~~~~~~L~~l~ls~N~ 433 (1103)
..|.++++|++|||++|+|+..++..|.++++|+.+++ .--..+|....+++|+.++++++.
T Consensus 196 ~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~---~~l~~lP~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 196 DVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST---YNLKKLPTLEKLVALMEASLTYPS 257 (350)
T ss_dssp TTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC---TTCCCCCCTTTCCSCCEEECSCHH
T ss_pred HHhccCcccchhhcCCCCcCccChhhhccchHhhhccC---CCcCcCCCchhCcChhhCcCCCCc
Confidence 46788888888888888888777766666655555444 223355666778888888887654
No 357
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=1.2e-19 Score=190.51 Aligned_cols=181 Identities=23% Similarity=0.253 Sum_probs=158.1
Q ss_pred CEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCC
Q 043720 110 RVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGN 189 (1103)
Q Consensus 110 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 189 (1103)
+.+++++++++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..+.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46788888887 677655 468999999999999777777899999999999999999666667899999999999999
Q ss_pred cCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcccc
Q 043720 190 QVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIP 269 (1103)
Q Consensus 190 ~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 269 (1103)
++++..+..|+.+++|++|++++|+++ .+|...+..+++|++|+|++|++++..+..+..+++|++|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC--
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCc-ccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC--
Confidence 999877778899999999999999999 56666555568899999999999977677789999999999999988753
Q ss_pred ccccCCCCCCEEEccCCcCCCcCCccccCCCC
Q 043720 270 RELGWLRKLEVLDVSRNRLNGLIPTELGNCVE 301 (1103)
Q Consensus 270 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 301 (1103)
+++|++|+++.|+++|.+|.++++++.
T Consensus 164 -----~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 164 -----CPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp -----TTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred -----CCCHHHHHHHHHhCCceeeccCccccC
Confidence 568999999999999999999988765
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.5e-18 Score=184.72 Aligned_cols=133 Identities=26% Similarity=0.214 Sum_probs=81.7
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
++|++|+|++|.+++..|..+..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 66777777777777666777777777777777777776444455666777777777777776544445566666666666
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccc
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLV 241 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~ 241 (1103)
++|+++ .+|..+..+++|++|+|++|+++ .+|...+..+++|++|+|++|.++
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCBC
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCC-ccCHHHHhCCCCCCEEEeeCCCcc
Confidence 666666 45555556666666666666555 333332233344444444444444
No 359
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=3.7e-20 Score=230.32 Aligned_cols=229 Identities=18% Similarity=0.157 Sum_probs=105.6
Q ss_pred ChhhHHHHHHHHhhcc-CCCCcccCcCCCCCCCCceeeeEecCCCCeEEEEecCCCCCCCCCCccccccccccccccccc
Q 043720 4 VLPEKTILLEFKNSVS-DPSGILSSWQTNTSSHCSWFGVSCDSESRVVALNITGGDVSEGNSKPFFSCLMTAQFPFYGFG 82 (1103)
Q Consensus 4 ~~~~~~aLl~~k~~~~-d~~~~l~sW~~~~~~~C~W~GV~C~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (1103)
...+++||+++..++. +....-++|.......+.|.|++++. .+++.+++.+..+..... .. +....+.
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~-~~--------l~~l~Ls 199 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEANQ-AL--------LQHKKLS 199 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcchh-hH--------hhcCccC
Confidence 4678999999998884 33444567865444567899999985 578888776543322100 00 0000000
Q ss_pred cccceeccCCCccccccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEc
Q 043720 83 MRRRTCLHGRGKLVGKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNL 162 (1103)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 162 (1103)
......++...+.....+..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+.|++|++|+|
T Consensus 200 ~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 277 (727)
T 4b8c_D 200 QYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDL 277 (727)
T ss_dssp ----------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEEC
T ss_pred cccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeC
Confidence 00000000001111123445666677777777777766 66666666777777777777776 66666777777777777
Q ss_pred cccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCcccc
Q 043720 163 AFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVG 242 (1103)
Q Consensus 163 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~ 242 (1103)
++|+|+ .+|..|++|++|++|+|++|.|+ .+|..|+++++|++|+|++|.|+|.+|..++.....+..|+|++|.+++
T Consensus 278 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 278 SHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp TTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred cCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccC
Confidence 777776 66766777777777777777665 5566666777777777777777666665554432223345666666666
Q ss_pred ccCc
Q 043720 243 RIPS 246 (1103)
Q Consensus 243 ~~p~ 246 (1103)
.+|.
T Consensus 356 ~~p~ 359 (727)
T 4b8c_D 356 PLPH 359 (727)
T ss_dssp CCCC
T ss_pred cCcc
Confidence 6554
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=2.2e-18 Score=208.95 Aligned_cols=174 Identities=26% Similarity=0.374 Sum_probs=130.0
Q ss_pred cCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCC
Q 043720 103 VGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLE 182 (1103)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 182 (1103)
+..|++|+.|+|++|.+. .+| .+..+++|++|+|++|.+++..| +..+++|++|+|++|+|++ +| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 456788888888888887 344 57788888888888888885544 7888888888888888874 44 678888888
Q ss_pred EEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCc
Q 043720 183 VLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSN 262 (1103)
Q Consensus 183 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 262 (1103)
+|+|++|.+++. ..+..+++|+.|+|++|++++ + ..+.. +++|+.|+|++|++++..| +..+++|+.|+|++|
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~-l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-I-TVLSR-LTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 185 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCC-C-GGGGS-CTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCC-c-hhhcc-cCCCCEEECcCCcCCCchh--hccCCCCCEEECcCC
Confidence 888888888853 347778888888888888873 4 33433 4678888888888876544 777788888888888
Q ss_pred cCCccccccccCCCCCCEEEccCCcCCCc
Q 043720 263 MLNDVIPRELGWLRKLEVLDVSRNRLNGL 291 (1103)
Q Consensus 263 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 291 (1103)
.|++. ..+..+++|+.|+|++|++.+.
T Consensus 186 ~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 186 HISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 87764 3577777888888888877654
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.76 E-value=1.9e-18 Score=191.19 Aligned_cols=174 Identities=25% Similarity=0.363 Sum_probs=135.8
Q ss_pred cCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCC
Q 043720 103 VGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLE 182 (1103)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 182 (1103)
++.+++|++|++++|.+.+ +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ +| .+.++++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 4567888889998888873 44 47888888999999888885444 8888889999998888884 44 488888888
Q ss_pred EEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCc
Q 043720 183 VLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSN 262 (1103)
Q Consensus 183 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 262 (1103)
+|++++|++++. ..++.+++|++|++++|+++ .+ ..+.. +++|++|++++|++++..+ +..+++|+.|++++|
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~-~~-~~l~~-l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKIT-DI-TVLSR-LTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCC-CC-GGGGG-CTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCC-cc-hhhcc-CCCCCEEEccCCccccchh--hcCCCccCEEECCCC
Confidence 888888888863 45778888888888888888 44 34443 5778888888888886544 788888888888888
Q ss_pred cCCccccccccCCCCCCEEEccCCcCCCc
Q 043720 263 MLNDVIPRELGWLRKLEVLDVSRNRLNGL 291 (1103)
Q Consensus 263 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 291 (1103)
.+++. + .+..+++|+.|++++|+++..
T Consensus 189 ~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 189 HISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred cCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 88774 3 478888888888888888753
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=4.4e-18 Score=179.85 Aligned_cols=152 Identities=20% Similarity=0.304 Sum_probs=93.9
Q ss_pred EEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeeccccc
Q 043720 135 VLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNE 214 (1103)
Q Consensus 135 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~ 214 (1103)
.++++++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444444 3443332 445555555555554444455555555555555555555555555556666666666666
Q ss_pred CCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCC
Q 043720 215 LNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNG 290 (1103)
Q Consensus 215 l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 290 (1103)
++ .+|...+..+++|++|+|++|++++..|..+..+++|++|+|++|++++..+..|..+++|+.|+|++|.+..
T Consensus 92 l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 IT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 65 5555554445666666666676666666677777778888888888877666677778888888888887763
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=8.3e-18 Score=177.74 Aligned_cols=133 Identities=20% Similarity=0.227 Sum_probs=74.2
Q ss_pred CEEEccccccCCCCC-CCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECc
Q 043720 158 RVLNLAFNRIDGDIP-FSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLS 236 (1103)
Q Consensus 158 ~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~ 236 (1103)
++|+|++|+|++..| ..+.++++|++|+|++|++++..+..|+.+++|++|+|++|+++ .++...+..+++|++|+|+
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCGGGGTTCSSCCEEECT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccC-ccCHhHhcCCcCCCEEECC
Confidence 444444444443322 22344444444444444444444444444555555555555554 2333322334555666666
Q ss_pred CCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCc
Q 043720 237 GNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGL 291 (1103)
Q Consensus 237 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 291 (1103)
+|++++..|..+..+++|++|+|++|++++..|..|..+++|+.|+|++|.+++.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 6666655566666777777777777777776677777777777777777777654
No 364
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.74 E-value=7.1e-18 Score=204.42 Aligned_cols=188 Identities=27% Similarity=0.295 Sum_probs=158.0
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
..+..+.|..+.+.+.++ +..+++|+.|+|++|.+. .+| .+..+++|++|+|++|+|++..| +.++++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 345556777777775544 567899999999999998 455 58999999999999999996444 899999999999
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCc
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLND 266 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 266 (1103)
++|.+++ +| .++.+++|++|+|++|+++ .++ .+.. +++|+.|+|++|++++. ..+..+++|+.|+|++|.+++
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~-~l~-~l~~-l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGIS-DIN-GLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCC-CCG-GGGG-CTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCC-CCc-cccC-CCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 9999996 33 6899999999999999998 454 4444 58899999999999964 678999999999999999998
Q ss_pred cccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCc
Q 043720 267 VIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLF 311 (1103)
Q Consensus 267 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~ 311 (1103)
..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~ 208 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQE 208 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEE
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCc
Confidence 766 89999999999999999864 468889999999998643
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.74 E-value=9.7e-18 Score=185.45 Aligned_cols=187 Identities=27% Similarity=0.276 Sum_probs=158.2
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEcc
Q 043720 108 ELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLA 187 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 187 (1103)
.+..+.+..+.+++..+ +..+++|++|++++|.++ .++ .+..+++|++|+|++|++++. +. +.++++|++|+++
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECC
Confidence 34445566677765433 467899999999999998 445 489999999999999999954 44 9999999999999
Q ss_pred CCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcc
Q 043720 188 GNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDV 267 (1103)
Q Consensus 188 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 267 (1103)
+|.+++ ++ .++.+++|++|++++|+++ .++ .+.. +++|++|++++|++++. ..++.+++|++|++++|++++.
T Consensus 99 ~n~l~~-~~-~l~~l~~L~~L~L~~n~i~-~~~-~l~~-l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~ 171 (291)
T 1h6t_A 99 ENKVKD-LS-SLKDLKKLKSLSLEHNGIS-DIN-GLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 171 (291)
T ss_dssp SSCCCC-GG-GGTTCTTCCEEECTTSCCC-CCG-GGGG-CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CCcCCC-Ch-hhccCCCCCEEECCCCcCC-CCh-hhcC-CCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccc
Confidence 999996 33 4899999999999999998 454 4544 58899999999999964 6899999999999999999996
Q ss_pred ccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCc
Q 043720 268 IPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLF 311 (1103)
Q Consensus 268 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~ 311 (1103)
.+ +..+++|+.|+|++|++++. + .+..+++|+.|++++|.
T Consensus 172 ~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 172 VP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQE 211 (291)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEE
T ss_pred hh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCc
Confidence 55 99999999999999999964 4 59999999999999754
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=5.7e-18 Score=193.68 Aligned_cols=175 Identities=23% Similarity=0.201 Sum_probs=116.2
Q ss_pred CEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCcccccc-CCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccC
Q 043720 110 RVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFV-GLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAG 188 (1103)
Q Consensus 110 ~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 188 (1103)
+.+++++++++ .+|..+. ..+++|+|++|+|++..+..+. .+++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46777777776 5666554 3467777777777765565665 777777777777777755556677777777777777
Q ss_pred CcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCcc-c---cCCCCCCEEeCCCccC
Q 043720 189 NQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSS-L---GKCQQLRTLLLFSNML 264 (1103)
Q Consensus 189 n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~-l---~~l~~L~~L~L~~N~l 264 (1103)
|+|++..+..|..+++|++|+|++|++++..|..+. .+++|++|+|++|++++ +|.. + ..+++|+.|+|++|+|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~-~l~~L~~L~L~~N~l~~-l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFE-DMAQLQKLYLSQNQISR-FPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT-TCTTCCEEECCSSCCCS-CCGGGTC----CTTCCEEECCSSCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhC-CcccCCEEECCCCcCCe-eCHHHhcCcccCCcCCEEECCCCCC
Confidence 777766666677777777777777777633333333 34667777777777764 3333 3 4567777777777777
Q ss_pred CccccccccCCCC--CCEEEccCCcCC
Q 043720 265 NDVIPRELGWLRK--LEVLDVSRNRLN 289 (1103)
Q Consensus 265 ~~~~p~~l~~l~~--L~~L~Ls~N~l~ 289 (1103)
++..+..+..++. |+.|+|++|.+.
T Consensus 176 ~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 176 KKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CccCHHHhhhccHhhcceEEecCCCcc
Confidence 7655566666665 366777777765
No 367
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=7.1e-20 Score=220.74 Aligned_cols=122 Identities=28% Similarity=0.377 Sum_probs=102.2
Q ss_pred CccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEecc
Q 043720 568 SLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELS 647 (1103)
Q Consensus 568 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 647 (1103)
.|++|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .|+.+++|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999986 465 888999999999999998 788899999999999999999985 66 88899999999999
Q ss_pred CccccCcC-hhhhhhcccccccccccccCcCCCCcc---ccCCCCCceEeC
Q 043720 648 SNSLSGEV-PEGVVNLRNLTALLLDNNKLSGHLPSG---LANVTSLSIFNA 694 (1103)
Q Consensus 648 ~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~l~~L~~l~l 694 (1103)
+|+|++.. |..+..+++|+.|+|++|+|++.+|.. +..+++|+.||+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99998776 888999999999999999998665532 234788888764
No 368
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=1e-17 Score=172.99 Aligned_cols=137 Identities=24% Similarity=0.344 Sum_probs=98.9
Q ss_pred cEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccCc
Q 043720 570 RVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSN 649 (1103)
Q Consensus 570 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 649 (1103)
+++++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666666 3344332 46777777777776 56677777777777777777777666677777888888888888
Q ss_pred cccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCC
Q 043720 650 SLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNVTTMNCSGVIGNPFLDPCQMYKD 729 (1103)
Q Consensus 650 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~l~~Np~~c~C~~~~~ 729 (1103)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+ +.+|||.|||++..+
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~---------------------L~~N~~~C~c~l~~l 147 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLA---------------------IGANPLYCDCNMQWL 147 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEE---------------------CCSSCEECSGGGHHH
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEE---------------------eCCCCeecCCcCHHH
Confidence 88777777777788888888888888765556677777777764 567899999998654
Q ss_pred CC
Q 043720 730 IS 731 (1103)
Q Consensus 730 ~~ 731 (1103)
..
T Consensus 148 ~~ 149 (193)
T 2wfh_A 148 SD 149 (193)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=3.9e-20 Score=223.00 Aligned_cols=147 Identities=22% Similarity=0.117 Sum_probs=71.9
Q ss_pred CCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEe
Q 043720 129 SLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVL 208 (1103)
Q Consensus 129 ~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 208 (1103)
.+++|+.|+|++|+++ .+|.+++.+++|+.|++++|.....+|.. +..+.+.+.+|..++.+++|+.|
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l~~l~~L~~L 414 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETLQYFSTLKAV 414 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHHHHHHHHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHHHHHHhcccC
Confidence 3445555555555554 45555555555555555443311011100 00112445666677777777777
Q ss_pred e-cccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCc
Q 043720 209 F-LSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNR 287 (1103)
Q Consensus 209 ~-L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 287 (1103)
+ ++.|.+. .|+.+.+++|.++...+ ..|+.|+|++|.|++ +|. ++.+++|+.|+|++|+
T Consensus 415 ~~l~~n~~~------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 415 DPMRAAYLD------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp CGGGHHHHH------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred cchhhcccc------------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 7 5655443 13333444444442211 135555555555555 343 5555555555555555
Q ss_pred CCCcCCccccCCCCCCeEecc
Q 043720 288 LNGLIPTELGNCVELSVLVLS 308 (1103)
Q Consensus 288 l~~~~p~~l~~l~~L~~L~l~ 308 (1103)
|+ .+|..++++++|+.|+|+
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls 494 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQAS 494 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECC
T ss_pred cc-ccchhhhcCCCCCEEECC
Confidence 55 445555555555555554
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=1.9e-17 Score=171.08 Aligned_cols=103 Identities=27% Similarity=0.326 Sum_probs=54.9
Q ss_pred CCCEEEccCCcCCCCCCc-ccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhccccccccc
Q 043720 592 SLVFLDLNGNKLQGEIPS-SLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLL 670 (1103)
Q Consensus 592 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 670 (1103)
+|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 445555555555433322 2455555555555555555544555555555555555555555544445555555555555
Q ss_pred ccccCcCCCCccccCCCCCceEeC
Q 043720 671 DNNKLSGHLPSGLANVTSLSIFNA 694 (1103)
Q Consensus 671 ~~N~l~~~~p~~l~~l~~L~~l~l 694 (1103)
++|+|++.+|..+..+++|+.|++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L 133 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNL 133 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEEC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEe
Confidence 555555555555655666665543
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.9e-17 Score=170.56 Aligned_cols=153 Identities=19% Similarity=0.227 Sum_probs=79.1
Q ss_pred CCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCE
Q 043720 104 GGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEV 183 (1103)
Q Consensus 104 ~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 183 (1103)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44555555666555555 444 4555555555555555443 2224555555555555555555445555555555555
Q ss_pred EEccCCcCCCCCChhcccCCCCcEeeccccc-CCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCc
Q 043720 184 LNLAGNQVKGVIPGFLGSFLKLRVLFLSYNE-LNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSN 262 (1103)
Q Consensus 184 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 262 (1103)
|++++|++++..|..++.+++|++|++++|+ ++ .+| .+..+++|++|++++|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~--------------------------~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM--------------------------PLKTLPELKSLNIQFD 169 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG--------------------------GGGGCSSCCEEECTTB
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH--------------------------hhcCCCCCCEEECCCC
Confidence 5555555555445555555555555555554 32 333 3444555555555555
Q ss_pred cCCccccccccCCCCCCEEEccCCcCC
Q 043720 263 MLNDVIPRELGWLRKLEVLDVSRNRLN 289 (1103)
Q Consensus 263 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 289 (1103)
.+++. + .+..+++|+.|++++|++.
T Consensus 170 ~i~~~-~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 170 GVHDY-R-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCCC-T-TGGGCSSCCEEEECBC---
T ss_pred CCcCh-H-HhccCCCCCEEEeeCcccC
Confidence 55542 2 4555555555555555554
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=1.6e-17 Score=171.54 Aligned_cols=173 Identities=21% Similarity=0.235 Sum_probs=141.1
Q ss_pred cEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcc-cccCCCCCCEEEccCCcCCCCCCcccccCccCcEEecc
Q 043720 545 MVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQ-SLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLA 623 (1103)
Q Consensus 545 ~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 623 (1103)
..+++++|++. .+|..+. .++++|+|++|+|+++.+. .|..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCC---CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 57899999995 8998776 5899999999999977765 58999999999999999998889999999999999999
Q ss_pred CcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCcc-ccCCCCCceEeCCCCCCCCC
Q 043720 624 DNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSG-LANVTSLSIFNASFNNLSGP 702 (1103)
Q Consensus 624 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~l~l~~N~l~~~ 702 (1103)
+|+|++..+..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++..+.. +. ..++...+..+.....
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCG 164 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCC
Confidence 99999988888999999999999999999988999999999999999999998654421 11 1122223344444444
Q ss_pred CCCCccccccccccCCCCCCC
Q 043720 703 FPWNVTTMNCSGVIGNPFLDP 723 (1103)
Q Consensus 703 ~p~~~~~~~~~~l~~Np~~c~ 723 (1103)
.|..+....-..+..+.+.|+
T Consensus 165 ~P~~l~~~~l~~l~~~~~~C~ 185 (192)
T 1w8a_A 165 APSKVRDVQIKDLPHSEFKCS 185 (192)
T ss_dssp SSTTTTTSBGGGSCTTTCCCC
T ss_pred CChHHcCCChhhCcHhhcCcC
Confidence 555555555556667777775
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=3.2e-17 Score=170.14 Aligned_cols=138 Identities=17% Similarity=0.216 Sum_probs=116.0
Q ss_pred cccCcccCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCC
Q 043720 97 GKLSPLVGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLR 176 (1103)
Q Consensus 97 g~~~~~l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~ 176 (1103)
..+| .+..+++|++|++++|.++ .++.+..+++|++|+|++|.+++..|..++.+++|++|+|++|++++..|..++
T Consensus 57 ~~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~ 133 (197)
T 4ezg_A 57 TDLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKIN 133 (197)
T ss_dssp SCCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHT
T ss_pred cChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHh
Confidence 3566 6899999999999999765 445899999999999999999988999999999999999999999988899999
Q ss_pred CCCCCCEEEccCCc-CCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCcccc
Q 043720 177 NFESLEVLNLAGNQ-VKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVG 242 (1103)
Q Consensus 177 ~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~ 242 (1103)
.+++|++|++++|. ++ .+| .+..+++|++|++++|+++ .++ .+.. +++|++|++++|++.+
T Consensus 134 ~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~-~~~-~l~~-l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 134 TLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVH-DYR-GIED-FPKLNQLYAFSQTIGG 195 (197)
T ss_dssp TCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCC-CCT-TGGG-CSSCCEEEECBC----
T ss_pred hCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCc-ChH-Hhcc-CCCCCEEEeeCcccCC
Confidence 99999999999998 55 555 6889999999999999998 455 3443 4678888888887653
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=1.1e-17 Score=181.90 Aligned_cols=171 Identities=25% Similarity=0.316 Sum_probs=108.7
Q ss_pred CCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEE
Q 043720 105 GLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVL 184 (1103)
Q Consensus 105 ~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (1103)
++.++..++++.|.+++ ++ .+..+++|++|++++|.++ .+| .+..+++|++|+|++|++++ +|. +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEE
Confidence 45566677777777763 33 4667777777777777777 455 57777777777777777774 333 7777777777
Q ss_pred EccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccC
Q 043720 185 NLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNML 264 (1103)
Q Consensus 185 ~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 264 (1103)
+|++|++++ +|.. .. ++|++|+|++|+++ .++ .+.. +++|++|+|++|++++. + .++.+++|+.|+|++|++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~-~~~-~l~~-l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELR-DTD-SLIH-LKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCS-BSG-GGTT-CTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccC-CCh-hhcC-cccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 777777775 3332 22 66777777777766 333 2332 45566666666666643 2 466666666666666666
Q ss_pred CccccccccCCCCCCEEEccCCcCCCc
Q 043720 265 NDVIPRELGWLRKLEVLDVSRNRLNGL 291 (1103)
Q Consensus 265 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 291 (1103)
++. ..+..+++|+.|++++|++++.
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred cch--HHhccCCCCCEEeCCCCcccCC
Confidence 654 4556666666666666666543
No 375
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=1.1e-17 Score=181.92 Aligned_cols=164 Identities=24% Similarity=0.304 Sum_probs=73.4
Q ss_pred CCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeec
Q 043720 131 EKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFL 210 (1103)
Q Consensus 131 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 210 (1103)
.++..+++++|.++ .++ .+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ ++.+++|++|+|
T Consensus 19 ~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 33444444444444 222 3444444445555444444 333 34444445555555444443322 444444455555
Q ss_pred ccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCC
Q 043720 211 SYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNG 290 (1103)
Q Consensus 211 ~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 290 (1103)
++|+++ .+|.... ++|++|+|++|++++. +.++.+++|+.|+|++|++++. + .+..+++|+.|+|++|++++
T Consensus 93 ~~N~l~-~l~~~~~---~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 93 NRNRLK-NLNGIPS---ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CSSCCS-CCTTCCC---SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCccC-CcCcccc---CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 544444 2332211 3344455555444431 2344444445555555444442 2 34444445555555544443
Q ss_pred cCCccccCCCCCCeEecccC
Q 043720 291 LIPTELGNCVELSVLVLSNL 310 (1103)
Q Consensus 291 ~~p~~l~~l~~L~~L~l~~~ 310 (1103)
. ..+..+++|+.|++++|
T Consensus 165 ~--~~l~~l~~L~~L~l~~N 182 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQ 182 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEE
T ss_pred h--HHhccCCCCCEEeCCCC
Confidence 3 34444444444444444
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.67 E-value=4.8e-17 Score=176.39 Aligned_cols=137 Identities=18% Similarity=0.222 Sum_probs=106.8
Q ss_pred CCCcceeccCCcccEEEEEE-cCCcE--EEEEEcccccch-----------------------hhHHHHHHHHHHHhcCC
Q 043720 823 FNTSNCIGSGGFGTTYKAEI-SPGIL--VAVKKLAVGRFQ-----------------------HGVQQFHAEIKTLGNVR 876 (1103)
Q Consensus 823 ~~~~~~lg~G~fg~V~~~~~-~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~ 876 (1103)
|++.+.||+|+||.||+|.. .+|+. ||||+++..... .....+.+|+..++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56788999999999999987 67888 999987543211 11236788999999998
Q ss_pred CCce--eEEEeEEecCCeEEEEEeecCC-C----ChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHH-hCCCCCcccCC
Q 043720 877 HPNL--VTLIGYRASGNEMFLIYNYLPG-G----NLENFIKARTSRAVDWKILHKIALDVASALAYLH-DQCAPRVLHRD 948 (1103)
Q Consensus 877 h~ni--v~l~~~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH-~~~~~~ivH~D 948 (1103)
|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~---givHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA---ELVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS---CEECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC---CEEeCC
Confidence 7754 344443 346899999942 4 66665432 234567889999999999999 88 999999
Q ss_pred CCCCcEEECCCCCEEEeeccccccc
Q 043720 949 VKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 949 lk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 377
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.66 E-value=5.5e-17 Score=201.84 Aligned_cols=153 Identities=27% Similarity=0.333 Sum_probs=54.0
Q ss_pred CCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCC---------CCCCCCCCCCCCCEEEccCCcCCCCCChhccc
Q 043720 131 EKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDG---------DIPFSLRNFESLEVLNLAGNQVKGVIPGFLGS 201 (1103)
Q Consensus 131 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~---------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 201 (1103)
+.++.|+|++|.+.. +|..+ |+.++|+.|.|++ ..|..+..+++|+.|+|++|.+. .+|..+..
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQAL-----LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCc-chhhH-----hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 557888888888874 44433 4444455544432 23444455555555555555554 34444444
Q ss_pred CCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEE
Q 043720 202 FLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVL 281 (1103)
Q Consensus 202 l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 281 (1103)
+++|++|+|++|+|+ .+|..++. +++|++|+|++|+|+ .+|..++++++|++|+|++|.|+. +|..|+.+++|+.|
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~L 321 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKN-LSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTT-LPWEFGNLCNLQFL 321 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGG-GTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCC-CCSSTTSCTTCCCE
T ss_pred CCCCCEEEeeCCcCc-ccChhhhC-CCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCc-cChhhhcCCCccEE
Confidence 555555555555554 44444433 244555555555544 344444444444444444444432 34444444444444
Q ss_pred EccCCcCCCcCCc
Q 043720 282 DVSRNRLNGLIPT 294 (1103)
Q Consensus 282 ~Ls~N~l~~~~p~ 294 (1103)
+|++|.|++.+|.
T Consensus 322 ~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 322 GVEGNPLEKQFLK 334 (727)
T ss_dssp ECTTSCCCSHHHH
T ss_pred eCCCCccCCCChH
Confidence 4444444444333
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=1.5e-16 Score=179.59 Aligned_cols=103 Identities=16% Similarity=0.044 Sum_probs=72.9
Q ss_pred cCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCc-EEeccCcccCCCCCCcccCCCCCcE
Q 043720 565 MCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLR-HLSLADNNLTGGIPSSIGELRSLEV 643 (1103)
Q Consensus 565 ~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~ 643 (1103)
.+++|+.|+|++|+++.+.+.+|.++++|+.|+|++| ++..-+.+|.++.+|+ .++|.+ +++...+..|.++++|+.
T Consensus 224 ~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 224 YMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp HCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred hcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 3577778888877777666677777777777777777 6645556677777777 777776 666555667777777777
Q ss_pred EeccCccccCcChhhhhhcccccccc
Q 043720 644 LELSSNSLSGEVPEGVVNLRNLTALL 669 (1103)
Q Consensus 644 L~Ls~N~l~~~~~~~~~~l~~L~~L~ 669 (1103)
|++++|+++.+.+.+|.++++|+.|+
T Consensus 302 l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 302 VLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEeCCCccCccchhhhcCCcchhhhc
Confidence 77777777655556677777776665
No 379
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=1.8e-16 Score=178.77 Aligned_cols=264 Identities=11% Similarity=0.078 Sum_probs=140.9
Q ss_pred CCCCCEEEccCCCCcccCCccccC-CCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCC-------
Q 043720 106 LSELRVLSLPFNGFSGEFPPEIWS-LEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRN------- 177 (1103)
Q Consensus 106 l~~L~~L~L~~n~l~g~~p~~l~~-l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~------- 177 (1103)
+.+++.|.++++ +.+.--..+.. +++|++|||++|++. .....-+.++.++.+.+..|.+. +..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~-~~~~~~~~~~~~~~~~~~~~~I~---~~aF~~~~~~~~~ 98 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIK-MYSGKAGTYPNGKFYIYMANFVP---AYAFSNVVNGVTK 98 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEEC-CEEESSSSSGGGCCEEECTTEEC---TTTTEEEETTEEE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeE-EecCccccccccccccccccccC---HHHhccccccccc
Confidence 566777777653 11111112333 677788888887776 11111112222344444444332 233444
Q ss_pred -CCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCcc----ccccCccc----
Q 043720 178 -FESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSL----VGRIPSSL---- 248 (1103)
Q Consensus 178 -l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l----~~~~p~~l---- 248 (1103)
+++|+.|+|.+ .++...+.+|.++++|+.|++++|.+. .+++..+..+.++..+.+..+.. .......+
T Consensus 99 g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~-~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~ 176 (329)
T 3sb4_A 99 GKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAP-NLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGE 176 (329)
T ss_dssp ECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCC-EECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESC
T ss_pred ccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCcc-ccchhhhcCCCceEEecCcchhhhhcccccccccccccc
Confidence 56666666655 555444455556666666666666555 45554444444444444333111 00000011
Q ss_pred ----------------------cCCCCCCEEeCCCccCCccccccc-cCCCCCCEEEccCCcCCCcCCccccCCCCCCeE
Q 043720 249 ----------------------GKCQQLRTLLLFSNMLNDVIPREL-GWLRKLEVLDVSRNRLNGLIPTELGNCVELSVL 305 (1103)
Q Consensus 249 ----------------------~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 305 (1103)
....+++.+.+.++-. ......+ ..+++|+.|+|++|+++...+..|.+|++|+.+
T Consensus 177 ~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~-~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l 255 (329)
T 3sb4_A 177 PLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLD-NADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKI 255 (329)
T ss_dssp CCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCC-HHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEE
T ss_pred ccceeEEecCCCcHHHHHhhcccCccccceEEEeeeec-HHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEE
Confidence 1233445555544321 1111112 126677777777777775555667777777777
Q ss_pred ecccCcCccccCccccCcccccccCCCCCCCCcccccCchhhhcccccc-ccccCCccccccCCccccccccCcEEEcCC
Q 043720 306 VLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLR-IIWAPRLNLEGKLPSSWGACESLEMLNLAQ 384 (1103)
Q Consensus 306 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~-~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 384 (1103)
++.+| +...-+..|.++++|+ .+.++. ++....+.+|.++++|+.|+|++
T Consensus 256 ~l~~n----------------------------i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~ 306 (329)
T 3sb4_A 256 KLPHN----------------------------LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATG 306 (329)
T ss_dssp ECCTT----------------------------CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECS
T ss_pred ECCcc----------------------------cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCC
Confidence 77531 1111223345556666 666665 56666677888888888888888
Q ss_pred cccccccchhhhccCCceEeec
Q 043720 385 NVLRGDLIGVFDRCKKLHFIDL 406 (1103)
Q Consensus 385 N~l~~~~~~~~~~l~~L~~LdL 406 (1103)
|.++.+...+|.++++|+.++.
T Consensus 307 n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 307 DKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp SCCCEECTTTTCTTCCCCEEEC
T ss_pred CccCccchhhhcCCcchhhhcc
Confidence 8888888888888888887763
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=157.21 Aligned_cols=128 Identities=27% Similarity=0.356 Sum_probs=118.2
Q ss_pred cEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccC
Q 043720 545 MVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLAD 624 (1103)
Q Consensus 545 ~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 624 (1103)
..+++++|++. .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 57899999988 8898765 68999999999999 6678999999999999999999988888999999999999999
Q ss_pred cccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcC
Q 043720 625 NNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSG 677 (1103)
Q Consensus 625 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 677 (1103)
|+|++..|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99998888899999999999999999997777789999999999999999973
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=1.5e-15 Score=153.23 Aligned_cols=133 Identities=24% Similarity=0.190 Sum_probs=88.6
Q ss_pred CCCCCEEEccCCCCc-ccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEE
Q 043720 106 LSELRVLSLPFNGFS-GEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVL 184 (1103)
Q Consensus 106 l~~L~~L~L~~n~l~-g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 184 (1103)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467778888888777 67777777777777777777777754 667777777777777777776566666667777777
Q ss_pred EccCCcCCCCC-ChhcccCCCCcEeecccccCCCCCCh---hHHhhcCcCcEEECcCCccc
Q 043720 185 NLAGNQVKGVI-PGFLGSFLKLRVLFLSYNELNGSIPS---ELGKYCRYLEHLDLSGNSLV 241 (1103)
Q Consensus 185 ~L~~n~l~~~~-p~~l~~l~~L~~L~L~~N~l~g~ip~---~~~~~~~~L~~L~L~~N~l~ 241 (1103)
+|++|.+++.. +..++.+++|++|++++|.++ .+|. ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776532 255666666666666666666 3333 22233455555555555554
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=6.4e-16 Score=155.86 Aligned_cols=134 Identities=24% Similarity=0.258 Sum_probs=93.2
Q ss_pred CCccEEECcCCcCC-CCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEe
Q 043720 567 KSLRVLDASHNQIS-GIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLE 645 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 645 (1103)
++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 55666677777777777777777743 5677777777777777777765666666677777777
Q ss_pred ccCccccCcCh-hhhhhcccccccccccccCcCCCC---ccccCCCCCceEeCCCCCCCCC
Q 043720 646 LSSNSLSGEVP-EGVVNLRNLTALLLDNNKLSGHLP---SGLANVTSLSIFNASFNNLSGP 702 (1103)
Q Consensus 646 Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~l~l~~N~l~~~ 702 (1103)
|++|+|++... ..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+...
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 77777774322 566777777777777777774444 3667777777777777766543
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=3.6e-15 Score=151.72 Aligned_cols=130 Identities=22% Similarity=0.254 Sum_probs=87.5
Q ss_pred cEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccC
Q 043720 545 MVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLAD 624 (1103)
Q Consensus 545 ~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 624 (1103)
..+++++|++. .+|..+. ++|++|++++|+++++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 10 ~~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 45677777766 5665544 5677777777777766666667777777777777777755555566777777777777
Q ss_pred cccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCC
Q 043720 625 NNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGH 678 (1103)
Q Consensus 625 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 678 (1103)
|++++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++.+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 777765555666777777777777777655554556666667777776666643
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1e-15 Score=150.96 Aligned_cols=127 Identities=22% Similarity=0.288 Sum_probs=100.6
Q ss_pred CCccEEECcCCcCC-CCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEe
Q 043720 567 KSLRVLDASHNQIS-GIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLE 645 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 645 (1103)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56888888888887 67777788888888888888888854 6778888888888888888876777777788888888
Q ss_pred ccCccccCc-ChhhhhhcccccccccccccCcCCCC---ccccCCCCCceEeCC
Q 043720 646 LSSNSLSGE-VPEGVVNLRNLTALLLDNNKLSGHLP---SGLANVTSLSIFNAS 695 (1103)
Q Consensus 646 Ls~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~l~l~ 695 (1103)
+++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 888888853 23678888888888888888886555 467788888888775
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=2.1e-15 Score=148.76 Aligned_cols=127 Identities=25% Similarity=0.258 Sum_probs=73.1
Q ss_pred CCCCEEEccCCCCc-ccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEE
Q 043720 107 SELRVLSLPFNGFS-GEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLN 185 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~-g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 185 (1103)
++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 55666677666666 56666666666666666666666643 5556666666666666666654555555566666666
Q ss_pred ccCCcCCCC-CChhcccCCCCcEeecccccCCCCCCh---hHHhhcCcCcEEECc
Q 043720 186 LAGNQVKGV-IPGFLGSFLKLRVLFLSYNELNGSIPS---ELGKYCRYLEHLDLS 236 (1103)
Q Consensus 186 L~~n~l~~~-~p~~l~~l~~L~~L~L~~N~l~g~ip~---~~~~~~~~L~~L~L~ 236 (1103)
+++|.+++. .+..++.+++|++|++++|.+++ +|. .....+++|++|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTN-LNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGG-STTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccc-hHHHHHHHHHHCCCcccccCC
Confidence 666666542 22455555556666666665552 232 222333445555543
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=8e-15 Score=149.16 Aligned_cols=130 Identities=25% Similarity=0.262 Sum_probs=107.9
Q ss_pred CccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEecc
Q 043720 568 SLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELS 647 (1103)
Q Consensus 568 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 647 (1103)
+.+.+++++|+++. +|..+ .++|+.|++++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 8 ~~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 8 SGTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp ETTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 35789999999984 45443 3789999999999997666778999999999999999997777778999999999999
Q ss_pred CccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCC
Q 043720 648 SNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLS 700 (1103)
Q Consensus 648 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 700 (1103)
+|+|++..+..+..+++|+.|+|++|+|++..+..+..+++|+.|++++|++.
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 137 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 137 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCee
Confidence 99999777777888999999999999999666666788888888866655443
No 387
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.52 E-value=6.6e-15 Score=165.08 Aligned_cols=139 Identities=12% Similarity=0.125 Sum_probs=102.5
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccch-------------hh--------HHHHHHHHHHHhcCCCCc
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQ-------------HG--------VQQFHAEIKTLGNVRHPN 879 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~-------------~~--------~~~~~~E~~~l~~l~h~n 879 (1103)
.=|.+.++||+|+||.||+|...+|+.||||+++..... .. .....+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 348899999999999999999889999999987543110 00 011245677777775444
Q ss_pred ee--EEEeEEecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEEC
Q 043720 880 LV--TLIGYRASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLD 957 (1103)
Q Consensus 880 iv--~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~ 957 (1103)
+. ..+++. ..++||||+++++|.++.. ......++.|++.+|.|||+. +||||||||.|||++
T Consensus 175 v~vp~p~~~~----~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~ 239 (397)
T 4gyi_A 175 FPVPEPIAQS----RHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIR 239 (397)
T ss_dssp CSCCCEEEEE----TTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE
T ss_pred CCCCeeeecc----CceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEe
Confidence 32 223321 2379999999988866432 123456889999999999999 999999999999998
Q ss_pred CCC----------CEEEeecccccccC
Q 043720 958 DDF----------NAYLSDFGLSRLLG 974 (1103)
Q Consensus 958 ~~~----------~~ki~Dfgla~~~~ 974 (1103)
+++ .+.|+||+-+....
T Consensus 240 ~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 240 EEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCCcccccccccceEEEEeCCcccCC
Confidence 776 38999999876543
No 388
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=3e-14 Score=143.69 Aligned_cols=104 Identities=29% Similarity=0.336 Sum_probs=50.7
Q ss_pred ccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccC
Q 043720 569 LRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSS 648 (1103)
Q Consensus 569 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 648 (1103)
.++|++++|+++. +|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3456666666653 343332 4555555555555544454555555555555555555544444444555555555555
Q ss_pred ccccCcChhhhhhcccccccccccccC
Q 043720 649 NSLSGEVPEGVVNLRNLTALLLDNNKL 675 (1103)
Q Consensus 649 N~l~~~~~~~~~~l~~L~~L~L~~N~l 675 (1103)
|+|++..+..|..+++|+.|+|++|++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~ 114 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPW 114 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCC
Confidence 555443333344444444444444433
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=1.9e-16 Score=164.51 Aligned_cols=161 Identities=25% Similarity=0.322 Sum_probs=83.0
Q ss_pred cCCCCCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCC
Q 043720 103 VGGLSELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLE 182 (1103)
Q Consensus 103 l~~l~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 182 (1103)
+.....++.++++.+.++|.+|. ++ .+|..+..+++|++|+|++|++++ +| .+.++++|+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~-----------------l~-~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~ 73 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPP-----------------IE-KMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLR 73 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTT-----------------CC-CCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCC
T ss_pred HHhcccccCcchheeEeccccCc-----------------Hh-hhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCC
Confidence 34455666677777777766664 00 122244444444444444444442 34 444444555
Q ss_pred EEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccC-ccccCCCCCCEEeCCC
Q 043720 183 VLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIP-SSLGKCQQLRTLLLFS 261 (1103)
Q Consensus 183 ~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~ 261 (1103)
+|++++|.++ .+|..+..+++|++|++++|+++ .+| .+.. +++|++|++++|++++..+ ..+..+++|++|++++
T Consensus 74 ~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~-~l~-~~~~-l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~ 149 (198)
T 1ds9_A 74 ILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEK-LVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAG 149 (198)
T ss_dssp EEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECC-CHH-HHHH-HHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECS
T ss_pred EEECCCCCcc-cccchhhcCCcCCEEECcCCcCC-cCC-cccc-CCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecC
Confidence 5555555544 34444444455555555555555 233 2332 2445555555555553211 3455566666666666
Q ss_pred ccCCccccc----------cccCCCCCCEEEccCCcCC
Q 043720 262 NMLNDVIPR----------ELGWLRKLEVLDVSRNRLN 289 (1103)
Q Consensus 262 N~l~~~~p~----------~l~~l~~L~~L~Ls~N~l~ 289 (1103)
|.+++.+|. .+..+++|+.|| +|.++
T Consensus 150 N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 150 NPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp CHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 666554443 266677777766 55554
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=2.2e-14 Score=145.66 Aligned_cols=128 Identities=21% Similarity=0.221 Sum_probs=83.6
Q ss_pred CCccEEECcCCcCCCCCcccccCC-CCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEe
Q 043720 567 KSLRVLDASHNQISGIVPQSLENL-TSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLE 645 (1103)
Q Consensus 567 ~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 645 (1103)
.+|++|+|++|+|+.+ |. +..+ ++|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 5677777777777633 43 3333 3777777777777643 4566777777777777777754444456777777777
Q ss_pred ccCccccCcChh--hhhhcccccccccccccCcCCCCcc----ccCCCCCceEeCCCCCCC
Q 043720 646 LSSNSLSGEVPE--GVVNLRNLTALLLDNNKLSGHLPSG----LANVTSLSIFNASFNNLS 700 (1103)
Q Consensus 646 Ls~N~l~~~~~~--~~~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~l~l~~N~l~ 700 (1103)
|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|+.||++.|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777775 3444 5667777777777777776 44543 666777777777776653
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=4.4e-16 Score=161.71 Aligned_cols=150 Identities=24% Similarity=0.251 Sum_probs=120.2
Q ss_pred ccCCCCCCEEEccccccCCCCCC------CCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHH
Q 043720 151 FVGLRNLRVLNLAFNRIDGDIPF------SLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELG 224 (1103)
Q Consensus 151 l~~l~~L~~L~Ls~N~l~~~~p~------~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~ 224 (1103)
+.....++.++++.+.++|.+|. .+.++++|++|+|++|.+++ +| .++.+++|++|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44456667777777777766666 78888999999999999986 66 7888899999999999998 7887655
Q ss_pred hhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCcccc-ccccCCCCCCEEEccCCcCCCcCCcc--------
Q 043720 225 KYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIP-RELGWLRKLEVLDVSRNRLNGLIPTE-------- 295 (1103)
Q Consensus 225 ~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~-------- 295 (1103)
. +++|++|+|++|++++ +| .++.+++|++|++++|++++..+ ..+..+++|++|++++|.+++.+|..
T Consensus 91 ~-~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 167 (198)
T 1ds9_A 91 V-ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp H-HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHH
T ss_pred c-CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHH
Confidence 4 4679999999999985 44 68888899999999999987432 57888999999999999988776653
Q ss_pred --ccCCCCCCeEe
Q 043720 296 --LGNCVELSVLV 306 (1103)
Q Consensus 296 --l~~l~~L~~L~ 306 (1103)
+..+++|+.|+
T Consensus 168 ~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 168 EVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHCSSCSEEC
T ss_pred HHHHhCCCcEEEC
Confidence 78888998887
No 392
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=7.8e-14 Score=141.09 Aligned_cols=79 Identities=27% Similarity=0.267 Sum_probs=36.8
Q ss_pred ccCcEEeccCcccCCCCCCcccCCCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEe
Q 043720 615 KYLRHLSLADNNLTGGIPSSIGELRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFN 693 (1103)
Q Consensus 615 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~ 693 (1103)
++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 111 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIY 111 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEE
Confidence 3444444444444444444444444444444444444443333344445555555555555433333455555555543
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=7.2e-14 Score=141.91 Aligned_cols=134 Identities=17% Similarity=0.201 Sum_probs=68.9
Q ss_pred ccCCCCCCEEEeecCCCCCCccccccCCC-CCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCC
Q 043720 127 IWSLEKLEVLDVEGNFLSGRLPNEFVGLR-NLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKL 205 (1103)
Q Consensus 127 l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L 205 (1103)
+.++.+|++|+|++|.++ .+|. +..+. +|++|+|++|++++. ..+.++++|++|+|++|++++..+..++.+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 445566666666666666 3343 33333 666666666666532 455555556666666655554433334555555
Q ss_pred cEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccc----cccCCCCCCEE
Q 043720 206 RVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPR----ELGWLRKLEVL 281 (1103)
Q Consensus 206 ~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L 281 (1103)
++|++++|+++ .+|.. ..++.+++|+.|++++|.++. +|. .+..+++|+.|
T Consensus 91 ~~L~L~~N~i~-~~~~~-----------------------~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDL-----------------------DPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp CEEECCSCCCC-CGGGG-----------------------GGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEE
T ss_pred CEEECCCCcCC-cchhh-----------------------HhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCcccee
Confidence 55555555553 34330 134444445555555555443 233 24555555555
Q ss_pred EccCCcCC
Q 043720 282 DVSRNRLN 289 (1103)
Q Consensus 282 ~Ls~N~l~ 289 (1103)
|+++|.+.
T Consensus 146 d~~~n~~~ 153 (176)
T 1a9n_A 146 DFQKVKLK 153 (176)
T ss_dssp TTEECCHH
T ss_pred CCCcCCHH
Confidence 55555543
No 394
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.44 E-value=1.3e-12 Score=150.29 Aligned_cols=246 Identities=11% Similarity=0.091 Sum_probs=123.5
Q ss_pred CCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEEC
Q 043720 156 NLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDL 235 (1103)
Q Consensus 156 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L 235 (1103)
+|+.++|..| ++..-..+|.+ .+|+.+.+.+ .++..-+..|.++++|+.+++++|+++ .++...+. +.+|+.+.|
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTT-TCCCSEEEC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEe-ecccCEEEe
Confidence 3444444433 33222233333 2355555443 333333344445555555555555554 44444444 244555555
Q ss_pred cCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEccCCcCCCcCCccccCCCCCCeEecccCcCccc
Q 043720 236 SGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVSRNRLNGLIPTELGNCVELSVLVLSNLFDPLL 315 (1103)
Q Consensus 236 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~l~~~~~~~l 315 (1103)
..+ ++..-...|.++++|+.+++..| ++.+...+|.. .+|+.+.+ .|.++..-..+|.+|++|+.+.+.++...
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~-- 284 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFN-- 284 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCC--
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcccc--
Confidence 422 44333444555555555555543 33333444444 45555555 23344344445555555555555432110
Q ss_pred cCccccCcccccccCCCCCCCCcccccCchhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhh
Q 043720 316 SGRNIRGELSVGQSDASNGEKNSFIGSIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVF 395 (1103)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~n~~~~~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 395 (1103)
.+.....-+..|..+++|+.+.+. +++...-..+|.++++|+.++|..| ++.+...+|
T Consensus 285 --------------------~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF 342 (401)
T 4fdw_A 285 --------------------DDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAF 342 (401)
T ss_dssp --------------------CCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSS
T ss_pred --------------------CCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhC
Confidence 000001112334555566666666 3455555667777777777777544 666677777
Q ss_pred hccCCceEeecCCcccccccccc-ccc-cceeEEEecCCccc
Q 043720 396 DRCKKLHFIDLSSNELSGELDVK-LQV-PCMALFDVSGNHMS 435 (1103)
Q Consensus 396 ~~l~~L~~LdLs~N~l~~~~~~~-~~~-~~L~~l~ls~N~l~ 435 (1103)
.++ +|+.+++++|.+....+.. ..+ ..+..+++..|.+.
T Consensus 343 ~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 343 NNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 777 7888888777765433322 234 35667777666544
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=5.3e-13 Score=134.47 Aligned_cols=108 Identities=29% Similarity=0.371 Sum_probs=98.7
Q ss_pred ccEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEecc
Q 043720 544 GMVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLA 623 (1103)
Q Consensus 544 ~~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 623 (1103)
...+++++|++. .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 457999999998 6998775 789999999999999989999999999999999999997777778999999999999
Q ss_pred CcccCCCCCCcccCCCCCcEEeccCccccCcC
Q 043720 624 DNNLTGGIPSSIGELRSLEVLELSSNSLSGEV 655 (1103)
Q Consensus 624 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 655 (1103)
+|+|++..+..|..+++|++|+|++|+++...
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 99999877778999999999999999998643
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=5.6e-13 Score=134.76 Aligned_cols=105 Identities=27% Similarity=0.332 Sum_probs=87.3
Q ss_pred cEEecCCCcccccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccC
Q 043720 545 MVANLSNNNIIGHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLAD 624 (1103)
Q Consensus 545 ~~l~ls~n~~~~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 624 (1103)
..+++++|++. .+|..+. ++|++|+|++|+|+++.|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 46888888885 7888775 6788999999999888888888899999999999998865555678888899999999
Q ss_pred cccCCCCCCcccCCCCCcEEeccCccccC
Q 043720 625 NNLTGGIPSSIGELRSLEVLELSSNSLSG 653 (1103)
Q Consensus 625 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 653 (1103)
|+|++..+..|..+++|++|+|++|++..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 98886666668888888888888888874
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.38 E-value=7.4e-12 Score=144.11 Aligned_cols=266 Identities=11% Similarity=0.092 Sum_probs=179.4
Q ss_pred CCCCEEEccCCCCcccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEc
Q 043720 107 SELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNL 186 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 186 (1103)
..++.+.+.+ .++..-..+|.++ +|+.++|..+ ++..-..+|.+ .+|+.+.|.. .++..-+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 5566666654 3443334455554 6777777655 55344445555 3577777775 555444566777777777777
Q ss_pred cCCcCCCCCChhcccCCCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCc
Q 043720 187 AGNQVKGVIPGFLGSFLKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLND 266 (1103)
Q Consensus 187 ~~n~l~~~~p~~l~~l~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 266 (1103)
++|+++......|. .++|+.+.+..+ ++ .|+...+..+++|+.+++..| ++..-..+|.+ .+|+.+.+ .+.++.
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~-~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LK-EIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CC-EECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hh-eehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 77777755555555 467777777643 55 677777766777777777764 44344455555 67777777 445666
Q ss_pred cccccccCCCCCCEEEccCCcCC-----CcCCccccCCCCCCeEecccCcCccccCccccCcccccccCCCCCCCCcccc
Q 043720 267 VIPRELGWLRKLEVLDVSRNRLN-----GLIPTELGNCVELSVLVLSNLFDPLLSGRNIRGELSVGQSDASNGEKNSFIG 341 (1103)
Q Consensus 267 ~~p~~l~~l~~L~~L~Ls~N~l~-----~~~p~~l~~l~~L~~L~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~~~~ 341 (1103)
+...+|..+++|+.+++.+|.+. ...+..|.+|++|+.+.+.+ ++..
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~----------------------------~i~~ 313 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE----------------------------SIRI 313 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT----------------------------TCCE
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC----------------------------ceEE
Confidence 56677777778888887777664 34456677788888877752 1111
Q ss_pred cCchhhhccccccccccCCccccccCCccccccccCcEEEcCCcccccccchhhhccC-CceEeecCCccccc
Q 043720 342 SIPMEITTLSKLRIIWAPRLNLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCK-KLHFIDLSSNELSG 413 (1103)
Q Consensus 342 ~ip~~~~~L~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~LdLs~N~l~~ 413 (1103)
.-...|.++++|+.+.+..+ +...-..+|.++ +|+.|++++|.+.......|.+++ +++.|++..+.+..
T Consensus 314 I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 314 LGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEK 384 (401)
T ss_dssp ECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHH
T ss_pred EhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHHH
Confidence 22334566677888888554 666777899999 999999999999988889999885 78999999887653
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.37 E-value=1.5e-11 Score=142.14 Aligned_cols=101 Identities=18% Similarity=0.122 Sum_probs=60.6
Q ss_pred hhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCc
Q 043720 563 GVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLE 642 (1103)
Q Consensus 563 ~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 642 (1103)
+..+.+|+.+.+..+ ++.+...+|.++++|+.++|.++ ++..-..+|.++.+|+.+.|..| ++..-...|.++++|+
T Consensus 293 F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLK 369 (394)
T ss_dssp TTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCC
T ss_pred ccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCC
Confidence 334456666666544 54455666777777777777644 55344556677777777777655 5544556677777777
Q ss_pred EEeccCccccCcChhhhhhccccccc
Q 043720 643 VLELSSNSLSGEVPEGVVNLRNLTAL 668 (1103)
Q Consensus 643 ~L~Ls~N~l~~~~~~~~~~l~~L~~L 668 (1103)
.+++..| ++ .+..+|.++++|+.+
T Consensus 370 ~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 370 KVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp EEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred EEEECCC-CE-EhhheecCCCCCcEE
Confidence 7777654 33 234456666666543
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=1.3e-12 Score=148.50 Aligned_cols=103 Identities=25% Similarity=0.256 Sum_probs=53.3
Q ss_pred EEECcCC-cCCCCCcccccCCCCCCEEEccC-CcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCCcEEeccC
Q 043720 571 VLDASHN-QISGIVPQSLENLTSLVFLDLNG-NKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSLEVLELSS 648 (1103)
Q Consensus 571 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 648 (1103)
.++++++ +|++ +|. +..+++|+.|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 5553 344 55555566666654 555544445555555555555555555555555555555555555555
Q ss_pred ccccCcChhhhhhcccccccccccccCc
Q 043720 649 NSLSGEVPEGVVNLRNLTALLLDNNKLS 676 (1103)
Q Consensus 649 N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 676 (1103)
|+|++..+..+..++ |+.|+|++|++.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 555543333333332 444444444443
No 400
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.32 E-value=2.6e-11 Score=140.17 Aligned_cols=126 Identities=13% Similarity=0.053 Sum_probs=87.4
Q ss_pred CchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCC
Q 043720 559 PLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGEL 638 (1103)
Q Consensus 559 p~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 638 (1103)
+...+..+..++.+.+..+.+. ...|..+.+|+.+.+.++ ++..-..+|.++.+|+.++|.++ ++..-...|.++
T Consensus 268 ~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c 342 (394)
T 4fs7_A 268 GGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGC 342 (394)
T ss_dssp CSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTC
T ss_pred eccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCC
Confidence 3334444566677766665443 456778888888888765 55445667888888888888754 665556788888
Q ss_pred CCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceE
Q 043720 639 RSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIF 692 (1103)
Q Consensus 639 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l 692 (1103)
.+|+.+++..| ++.+-..+|.+|.+|+.+++..+ ++ .+...|.++++|+.+
T Consensus 343 ~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 343 TSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 88888888777 66556678888888888888755 33 334567777777654
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=4.5e-13 Score=152.73 Aligned_cols=87 Identities=22% Similarity=0.080 Sum_probs=42.3
Q ss_pred CCCcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccc-----cCCCCCCEEeCCCccCCcc----cccccc
Q 043720 203 LKLRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSL-----GKCQQLRTLLLFSNMLNDV----IPRELG 273 (1103)
Q Consensus 203 ~~L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~----~p~~l~ 273 (1103)
++|++|+|++|.++......+...+++|++|+|++|.++......+ ...++|++|+|++|.|++. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 3555555555555433233333333445555555555543322222 1234566666666655442 333345
Q ss_pred CCCCCCEEEccCCcCC
Q 043720 274 WLRKLEVLDVSRNRLN 289 (1103)
Q Consensus 274 ~l~~L~~L~Ls~N~l~ 289 (1103)
.+++|++|+|++|.|+
T Consensus 181 ~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLG 196 (372)
T ss_dssp TCSSCCEEECTTSSCH
T ss_pred cCCCcCEEeCCCCCCC
Confidence 5556666666666654
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=4.7e-11 Score=135.50 Aligned_cols=128 Identities=18% Similarity=0.123 Sum_probs=102.7
Q ss_pred cEEecCCC-cccccCCchhhhcCCCccEEECcC-CcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEec
Q 043720 545 MVANLSNN-NIIGHIPLDIGVMCKSLRVLDASH-NQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSL 622 (1103)
Q Consensus 545 ~~l~ls~n-~~~~~ip~~~~~~~~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 622 (1103)
..++++++ ++. .||. +... ++|++|+|++ |+|+++.+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~-~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGA-ENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSC-SCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CCCC-CCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 45789998 777 6998 6655 8899999996 9999888899999999999999999999988899999999999999
Q ss_pred cCcccCCCCCCcccCCCCCcEEeccCccccCcCh-hhhhhcccccccccccccCc
Q 043720 623 ADNNLTGGIPSSIGELRSLEVLELSSNSLSGEVP-EGVVNLRNLTALLLDNNKLS 676 (1103)
Q Consensus 623 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~ 676 (1103)
++|+|++..+..|..++ |+.|+|++|.+...-. ..|....+.....+..+.++
T Consensus 88 ~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~ 141 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQ 141 (347)
T ss_dssp CSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCC
T ss_pred CCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCC
Confidence 99999977767777776 9999999999985332 22333333333344444444
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=4.4e-13 Score=152.81 Aligned_cols=143 Identities=24% Similarity=0.167 Sum_probs=73.9
Q ss_pred CCCCEEEccccccCCCCCCCC-CCCCCCCEEEccCCcCCCCCChhc-----ccCCCCcEeecccccCCCC----CChhHH
Q 043720 155 RNLRVLNLAFNRIDGDIPFSL-RNFESLEVLNLAGNQVKGVIPGFL-----GSFLKLRVLFLSYNELNGS----IPSELG 224 (1103)
Q Consensus 155 ~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~L~~n~l~~~~p~~l-----~~l~~L~~L~L~~N~l~g~----ip~~~~ 224 (1103)
++|++|+|++|.++......+ ..+++|++|+|++|.++......+ ...++|++|+|++|.++.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 345555555554442211111 123345555555555543322222 1234566666666655421 111112
Q ss_pred hhcCcCcEEECcCCccccc----cCccccCCCCCCEEeCCCccCCcc----ccccccCCCCCCEEEccCCcCCCcCCccc
Q 043720 225 KYCRYLEHLDLSGNSLVGR----IPSSLGKCQQLRTLLLFSNMLNDV----IPRELGWLRKLEVLDVSRNRLNGLIPTEL 296 (1103)
Q Consensus 225 ~~~~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l 296 (1103)
..++|++|+|++|.++.. ++..+...++|++|+|++|.|++. ++..+...++|++|+|++|.|++.....+
T Consensus 181 -~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 181 -GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp -TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred -cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 234566666666666532 244555666777777777777653 33445556778888888888775544444
Q ss_pred cC
Q 043720 297 GN 298 (1103)
Q Consensus 297 ~~ 298 (1103)
..
T Consensus 260 ~~ 261 (372)
T 3un9_A 260 RD 261 (372)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.11 E-value=2.6e-09 Score=123.28 Aligned_cols=154 Identities=14% Similarity=0.182 Sum_probs=65.9
Q ss_pred cccCCC-CCCEEEeecCCCCCCccccccCCCCCCEEEccccccCCCCCCCCCCCCCCCEEEccCCcCCCCCChhcccCCC
Q 043720 126 EIWSLE-KLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDGDIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFLK 204 (1103)
Q Consensus 126 ~l~~l~-~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 204 (1103)
+|.++. .|+.+.+..+ ++..-..+|.++++|+.+.++.|.-. .++..-..+|..+.+
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~---------------------~l~~Ig~~aF~~c~~ 115 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPS---------------------CVKKIGRQAFMFCSE 115 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCC---------------------CCCEECTTTTTTCTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCC---------------------eeeEechhhchhccc
Confidence 344443 3666666432 44233445555555555555544311 122222233444444
Q ss_pred CcEeecccccCCCCCChhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCccCCccccccccCCCCCCEEEcc
Q 043720 205 LRVLFLSYNELNGSIPSELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSNMLNDVIPRELGWLRKLEVLDVS 284 (1103)
Q Consensus 205 L~~L~L~~N~l~g~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 284 (1103)
|+.+.+..+ ++ .++...+..+.+|+.+.+..+ ++......+..+..|+.+.+..+ ++.+-..+|.. .+|+.+.+.
T Consensus 116 L~~i~~~~~-~~-~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip 190 (394)
T 4gt6_A 116 LTDIPILDS-VT-EIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIP 190 (394)
T ss_dssp CCBCGGGTT-CS-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEEC
T ss_pred ceeeccCCc-cc-eehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEEC
Confidence 444444332 22 334444444444555555332 22123334455555555555433 33322233332 445555554
Q ss_pred CCcCCCcCCccccCCCCCCeEec
Q 043720 285 RNRLNGLIPTELGNCVELSVLVL 307 (1103)
Q Consensus 285 ~N~l~~~~p~~l~~l~~L~~L~l 307 (1103)
.+-.. .....+.++.++.....
T Consensus 191 ~~~~~-i~~~af~~c~~l~~~~~ 212 (394)
T 4gt6_A 191 AKVTR-IGTNAFSECFALSTITS 212 (394)
T ss_dssp TTCCE-ECTTTTTTCTTCCEEEE
T ss_pred Ccccc-cccchhhhccccceecc
Confidence 43221 23344555555555544
No 405
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.03 E-value=3.9e-10 Score=122.33 Aligned_cols=147 Identities=14% Similarity=0.029 Sum_probs=113.9
Q ss_pred HHHHhcCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CCceeEEEeEEecCCeEE
Q 043720 816 IIRATGDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HPNLVTLIGYRASGNEMF 894 (1103)
Q Consensus 816 ~~~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 894 (1103)
+......|.+...++.|+.+.||++... ++.+++|+...... .....+.+|+.+++.+. +..+.++++++...+..|
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~ 86 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN 86 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence 3344567888888998999999999755 68899999865321 12345788999998884 677888999998888999
Q ss_pred EEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC----------------------------------
Q 043720 895 LIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQC---------------------------------- 940 (1103)
Q Consensus 895 lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~---------------------------------- 940 (1103)
+||||++|.++.+... +......++.++++++..||+..
T Consensus 87 lv~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 87 LLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EEEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 9999999999877531 11223468889999999999820
Q ss_pred ----------------------CCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 941 ----------------------APRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 941 ----------------------~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
.+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876556799998775
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.01 E-value=9.8e-09 Score=118.40 Aligned_cols=134 Identities=12% Similarity=0.149 Sum_probs=86.9
Q ss_pred CCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccC
Q 043720 558 IPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGE 637 (1103)
Q Consensus 558 ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 637 (1103)
+....+..|..|+.+.+.++..+ +...+|.++++|+.+.+. +.++..-..+|.++.+|+.+.|..+ ++..-...|.+
T Consensus 256 i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~ 332 (394)
T 4gt6_A 256 IETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAG 332 (394)
T ss_dssp ECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred cccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhC
Confidence 33444555677788887766554 666778888888888886 4455445567888888888888754 55455677888
Q ss_pred CCCCcEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCC
Q 043720 638 LRSLEVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNN 698 (1103)
Q Consensus 638 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~ 698 (1103)
+.+|+.+.|..+ ++.+-..+|.+|.+|+.+++.+|.... ..+.....|+.+.+..|.
T Consensus 333 C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 333 CEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp CTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 888888888655 664556788888888888888776542 345556677776665553
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=3.4e-10 Score=127.78 Aligned_cols=165 Identities=16% Similarity=0.151 Sum_probs=85.8
Q ss_pred cCcccCCCCCCCEEEccCCCCc---------ccCCccccCCCCCCEEEeecCCCCCCccccccCCCCCCEEEccccccCC
Q 043720 99 LSPLVGGLSELRVLSLPFNGFS---------GEFPPEIWSLEKLEVLDVEGNFLSGRLPNEFVGLRNLRVLNLAFNRIDG 169 (1103)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~n~l~---------g~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 169 (1103)
+..++.++++|+.|.+.++... +.++..+..+++|+.|+|++|.-. .++. + .+++|++|+|..|.++.
T Consensus 131 L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 131 IVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPD 207 (362)
T ss_dssp HHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCH
T ss_pred HHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCCh
Confidence 3445667788888888665331 224444556777888888776311 2333 3 26777777777766653
Q ss_pred CCCCCCC--CCCCCCEEEccC--CcCCCC-----CChhc--ccCCCCcEeecccccCCCCCChhHHh--hcCcCcEEECc
Q 043720 170 DIPFSLR--NFESLEVLNLAG--NQVKGV-----IPGFL--GSFLKLRVLFLSYNELNGSIPSELGK--YCRYLEHLDLS 236 (1103)
Q Consensus 170 ~~p~~l~--~l~~L~~L~L~~--n~l~~~-----~p~~l--~~l~~L~~L~L~~N~l~g~ip~~~~~--~~~~L~~L~L~ 236 (1103)
.....+. .+++|++|+|+. |...+. +...+ ..+++|++|+|++|.+++..+..++. .+++|++|+|+
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs 287 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDIS 287 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECC
T ss_pred HHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECC
Confidence 3222332 567777777642 221111 01111 23566666666666665333333332 23445555555
Q ss_pred CCccccc----cCccccCCCCCCEEeCCCccCCc
Q 043720 237 GNSLVGR----IPSSLGKCQQLRTLLLFSNMLND 266 (1103)
Q Consensus 237 ~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~ 266 (1103)
.|.+++. ++..+.++++|+.|+|++|.+++
T Consensus 288 ~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 288 AGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp SSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 5555432 22233344555555555555544
No 408
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.90 E-value=1e-09 Score=118.79 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=100.1
Q ss_pred cCCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCc--eeEEEeEEecCCeEEEEEe
Q 043720 821 GDFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPN--LVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 821 ~~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~E 898 (1103)
..+.+....+.|..+.||++...+|..+++|+.... ....+.+|+.+++.+.+.+ +.+++++...++..++|||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 345443333466679999998777888999987643 1245678888888885444 4568888888888999999
Q ss_pred ecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC--------------------------------------
Q 043720 899 YLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQC-------------------------------------- 940 (1103)
Q Consensus 899 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------------------------------------- 940 (1103)
|++|.++. ... .+ ...++.++++.+..||+..
T Consensus 96 ~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (264)
T 1nd4_A 96 EVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 165 (264)
T ss_dssp CCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred ecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCc
Confidence 99998884 111 11 2256777888888888651
Q ss_pred -----------------CCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 941 -----------------APRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 941 -----------------~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
.+.++|+|++|.||++++++.+.|+||+.+.
T Consensus 166 ~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 166 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred cHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999875
No 409
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.84 E-value=7.5e-09 Score=117.82 Aligned_cols=143 Identities=13% Similarity=0.182 Sum_probs=106.8
Q ss_pred CcceeccCCcccEEEEEEcCCcEEEEEEcc--cccchhhHHHHHHHHHHHhcCC--CCceeEEEeEEecC---CeEEEEE
Q 043720 825 TSNCIGSGGFGTTYKAEISPGILVAVKKLA--VGRFQHGVQQFHAEIKTLGNVR--HPNLVTLIGYRASG---NEMFLIY 897 (1103)
Q Consensus 825 ~~~~lg~G~fg~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lV~ 897 (1103)
..+.++.|.++.||++... +..+++|+.. ..........+.+|+.+++.+. +..+.++++++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4567899999999999876 4678888876 4332223456788999999886 45678889988776 4589999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQC------------------------------------- 940 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------- 940 (1103)
||++|..+.+.. -..++..+...++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 121 EFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp ECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 999988775411 123677888899999999999999731
Q ss_pred ------------------CCCcccCCCCCCcEEECCCCC--EEEeecccccc
Q 043720 941 ------------------APRVLHRDVKPSNILLDDDFN--AYLSDFGLSRL 972 (1103)
Q Consensus 941 ------------------~~~ivH~Dlk~~NIll~~~~~--~ki~Dfgla~~ 972 (1103)
.+.++|||+++.||+++.++. +.|.||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=1.6e-09 Score=122.27 Aligned_cols=182 Identities=13% Similarity=0.089 Sum_probs=109.8
Q ss_pred CCCCEEEccCCCCcc-c-------CCccccCCCCCCEEEeecCCCC---------CCccccccCCCCCCEEEccccccCC
Q 043720 107 SELRVLSLPFNGFSG-E-------FPPEIWSLEKLEVLDVEGNFLS---------GRLPNEFVGLRNLRVLNLAFNRIDG 169 (1103)
Q Consensus 107 ~~L~~L~L~~n~l~g-~-------~p~~l~~l~~L~~L~Ls~n~l~---------~~~p~~l~~l~~L~~L~Ls~N~l~~ 169 (1103)
..++.|.+....+.| . +.+++.++++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 456677777665553 2 1334556889999999765432 234555667788999999887311
Q ss_pred CCCCCCCCCCCCCEEEccCCcCCCCCChhcc--cCCCCcEeeccc--ccCCCCC-----ChhHH-hhcCcCcEEECcCCc
Q 043720 170 DIPFSLRNFESLEVLNLAGNQVKGVIPGFLG--SFLKLRVLFLSY--NELNGSI-----PSELG-KYCRYLEHLDLSGNS 239 (1103)
Q Consensus 170 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~--~l~~L~~L~L~~--N~l~g~i-----p~~~~-~~~~~L~~L~L~~N~ 239 (1103)
.++. +. +++|++|+|..|.++......++ .+++|++|+|+. |...|.. ...+. ..+++|++|+|++|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2333 33 78888888888887644333443 678888888753 2221111 11111 124567777777777
Q ss_pred cccccCcccc---CCCCCCEEeCCCccCCcc----ccccccCCCCCCEEEccCCcCCCc
Q 043720 240 LVGRIPSSLG---KCQQLRTLLLFSNMLNDV----IPRELGWLRKLEVLDVSRNRLNGL 291 (1103)
Q Consensus 240 l~~~~p~~l~---~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~ 291 (1103)
+++..+..+. .+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.++..
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 7643332332 466777777777777663 233344567777777777776643
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.74 E-value=1.1e-10 Score=124.78 Aligned_cols=66 Identities=32% Similarity=0.421 Sum_probs=32.5
Q ss_pred CCCCCCEEEccccccCC--CCCCCCCCCCCCCEEEccCCcCCCCCChhcccCC--CCcEeecccccCCCCCC
Q 043720 153 GLRNLRVLNLAFNRIDG--DIPFSLRNFESLEVLNLAGNQVKGVIPGFLGSFL--KLRVLFLSYNELNGSIP 220 (1103)
Q Consensus 153 ~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~--~L~~L~L~~N~l~g~ip 220 (1103)
.+++|++|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 45555666666665554 3334444555555555555555543 1222222 45555555555544333
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.70 E-value=6.6e-07 Score=102.45 Aligned_cols=40 Identities=15% Similarity=0.164 Sum_probs=26.4
Q ss_pred CccccccccCcEEEcCCcccccccchhhhccCCceEeecCC
Q 043720 368 PSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSS 408 (1103)
Q Consensus 368 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~ 408 (1103)
...+..+.+|+.+.+..+ +..+....|.++..|+.+.+..
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~ 249 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPK 249 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCC
Confidence 445666777777777544 5556666777777777776644
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.67 E-value=9.7e-09 Score=113.89 Aligned_cols=186 Identities=16% Similarity=0.170 Sum_probs=121.8
Q ss_pred cceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CCc--eeEEEeEEecCC---eEEEEEee
Q 043720 826 SNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HPN--LVTLIGYRASGN---EMFLIYNY 899 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~E~ 899 (1103)
.+.++.|....||++. ..+++|+.... .....+.+|+..++.+. +.. +.+++......+ ..|+|||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4568999999999873 56889886533 34567889999998873 322 344555543333 34889999
Q ss_pred cCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC---------------------------------------
Q 043720 900 LPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQC--------------------------------------- 940 (1103)
Q Consensus 900 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--------------------------------------- 940 (1103)
++|.++.+.... .++..+...++.++++.+..||+..
T Consensus 98 i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 98 IKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred cCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 999888754321 2667777888888888888888621
Q ss_pred ----------------CCCcccCCCCCCcEEECC--CCCEEEeecccccccCCCCCccccCC----cc---------ccc
Q 043720 941 ----------------APRVLHRDVKPSNILLDD--DFNAYLSDFGLSRLLGTSETHATTGV----AG---------TFG 989 (1103)
Q Consensus 941 ----------------~~~ivH~Dlk~~NIll~~--~~~~ki~Dfgla~~~~~~~~~~~~~~----~g---------~~~ 989 (1103)
.+.++|+|+++.||++++ ...+.|+||+.+........-..... .+ ..+
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~ 253 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYK 253 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcC
Confidence 145899999999999998 45688999998875322111000000 00 001
Q ss_pred ccC-ccccccCCCCCcchhHHHHHHHHHHHhCCCCC
Q 043720 990 YVA-PEYALTCRVSDKADVYSYGVVLLELISDKKAL 1024 (1103)
Q Consensus 990 y~a-PE~~~~~~~~~~sDvwslGvil~elltg~~p~ 1024 (1103)
+.. |+..... ....+.|++|.++|++.+|..+|
T Consensus 254 ~~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 254 HKDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CSCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 111 2222111 12368999999999999998664
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.60 E-value=2.1e-06 Score=98.16 Aligned_cols=121 Identities=13% Similarity=0.083 Sum_probs=72.8
Q ss_pred hhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCcccCCCCCCcccCCCCC
Q 043720 562 IGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELRSL 641 (1103)
Q Consensus 562 ~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 641 (1103)
.+..+..|+.+.+..+ ++.+-..+|.++.+|+.+.+..+ ++......|..+.+|+.+.+.++.++..-...|.++.+|
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCC
Confidence 3334456666666654 44455566777777777777544 443344566677777777777776665555667777777
Q ss_pred cEEeccCccccCcChhhhhhcccccccccccccCcCCCCccccCC
Q 043720 642 EVLELSSNSLSGEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANV 686 (1103)
Q Consensus 642 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 686 (1103)
+.++|..+ ++.+-..+|.++.+|+.+.+..+ ++..-..+|.+.
T Consensus 313 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 313 SSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred CEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 77777654 54344556777777777766544 442333444443
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.35 E-value=4e-08 Score=99.94 Aligned_cols=119 Identities=14% Similarity=0.131 Sum_probs=70.1
Q ss_pred ccCcccCCCCCCCEEEccCC-CCccc----CCccccCCCCCCEEEeecCCCCCC----ccccccCCCCCCEEEccccccC
Q 043720 98 KLSPLVGGLSELRVLSLPFN-GFSGE----FPPEIWSLEKLEVLDVEGNFLSGR----LPNEFVGLRNLRVLNLAFNRID 168 (1103)
Q Consensus 98 ~~~~~l~~l~~L~~L~L~~n-~l~g~----~p~~l~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 168 (1103)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|.++.. +...+...+.|++|+|++|.|+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455667788888888888 77643 334455567777788877777632 3344445566777777777766
Q ss_pred CC----CCCCCCCCCCCCEEEc--cCCcCCCCC----ChhcccCCCCcEeecccccCC
Q 043720 169 GD----IPFSLRNFESLEVLNL--AGNQVKGVI----PGFLGSFLKLRVLFLSYNELN 216 (1103)
Q Consensus 169 ~~----~p~~l~~l~~L~~L~L--~~n~l~~~~----p~~l~~l~~L~~L~L~~N~l~ 216 (1103)
.. +...+...++|++|+| ++|.++... ...+...++|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 32 3444555566666666 556665321 222333345555555555543
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.34 E-value=4.4e-08 Score=104.58 Aligned_cols=67 Identities=30% Similarity=0.467 Sum_probs=39.3
Q ss_pred cCCCCCCEEEccCCcCCC--CCCcccccCccCcEEeccCcccCCCCCCcccCCC--CCcEEeccCccccCcCh
Q 043720 588 ENLTSLVFLDLNGNKLQG--EIPSSLHRLKYLRHLSLADNNLTGGIPSSIGELR--SLEVLELSSNSLSGEVP 656 (1103)
Q Consensus 588 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~~ 656 (1103)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 356677777777777765 2345555666666666666666643 2233333 66666666666654433
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.33 E-value=1.9e-06 Score=96.08 Aligned_cols=137 Identities=18% Similarity=0.176 Sum_probs=101.7
Q ss_pred CCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCC----CceeEEEeEEecCCeEEEEE
Q 043720 822 DFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRH----PNLVTLIGYRASGNEMFLIY 897 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lV~ 897 (1103)
.+...+.++.|....||+. ++.+++|+..... ....+.+|+.+++.+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 6777788999999999998 6678888764322 23558889988888765 223445555 4568999
Q ss_pred eecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCC------------------------------------
Q 043720 898 NYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCA------------------------------------ 941 (1103)
Q Consensus 898 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~------------------------------------ 941 (1103)
||++|.++.+... ..++..+...++.++++.+..||+...
T Consensus 107 e~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
T 3r70_A 107 KYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT 182 (320)
T ss_dssp ECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence 9999988874331 125666777788888888888885421
Q ss_pred ------------------------CCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 942 ------------------------PRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 942 ------------------------~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
+.++|+|++|.||+++.+..+.|+||+.+...
T Consensus 183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23499999999999998666799999988653
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.30 E-value=2.6e-07 Score=93.85 Aligned_cols=61 Identities=20% Similarity=0.167 Sum_probs=35.7
Q ss_pred cCcEEECcCCccccc----cCccccCCCCCCEEeC--CCccCCcc----ccccccCCCCCCEEEccCCcCC
Q 043720 229 YLEHLDLSGNSLVGR----IPSSLGKCQQLRTLLL--FSNMLNDV----IPRELGWLRKLEVLDVSRNRLN 289 (1103)
Q Consensus 229 ~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 289 (1103)
+|++|+|++|.++.. +...+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+.
T Consensus 94 ~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 94 TLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 455555555555422 2344555566777777 66777653 3344555577777777777764
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.13 E-value=5.6e-06 Score=90.30 Aligned_cols=76 Identities=17% Similarity=0.145 Sum_probs=59.7
Q ss_pred CcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCC---ceeEEEeEEecCCeEEEEEeecC
Q 043720 825 TSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHP---NLVTLIGYRASGNEMFLIYNYLP 901 (1103)
Q Consensus 825 ~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lV~E~~~ 901 (1103)
..+.|+.|.++.||++...+|+.++||+..... ......+.+|+..++.+.+. .+.+++++. ..++||||++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 456799999999999998889999999965332 21235688999999999764 577888764 3589999999
Q ss_pred CCCh
Q 043720 902 GGNL 905 (1103)
Q Consensus 902 ~gsL 905 (1103)
++.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.08 E-value=2.2e-05 Score=86.70 Aligned_cols=136 Identities=20% Similarity=0.208 Sum_probs=93.5
Q ss_pred cceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCC---ceeEEEeEEe-cCCeEEEEEeecC
Q 043720 826 SNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHP---NLVTLIGYRA-SGNEMFLIYNYLP 901 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~E~~~ 901 (1103)
.+.++.|....||+. +..+++|+... ......+.+|+.+++.+.+. .+.+.+.++. ..+..++||||++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~ 96 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQ 96 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccC
Confidence 456888999999998 56788887532 23456788999999998642 3556666664 4556789999999
Q ss_pred CCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhC------------------------------------------
Q 043720 902 GGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQ------------------------------------------ 939 (1103)
Q Consensus 902 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~------------------------------------------ 939 (1103)
|..+.+..-. .++..+...++.++++.+..||+.
T Consensus 97 G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l 172 (306)
T 3tdw_A 97 GQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYL 172 (306)
T ss_dssp SEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHH
T ss_pred CeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHH
Confidence 9888663211 133344444555555555555532
Q ss_pred ---------------CCCCcccCCCCCCcEEECC---CCC-EEEeecccccc
Q 043720 940 ---------------CAPRVLHRDVKPSNILLDD---DFN-AYLSDFGLSRL 972 (1103)
Q Consensus 940 ---------------~~~~ivH~Dlk~~NIll~~---~~~-~ki~Dfgla~~ 972 (1103)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 173 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 173 TLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999987 455 48999998764
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.07 E-value=1.6e-05 Score=86.05 Aligned_cols=135 Identities=19% Similarity=0.164 Sum_probs=97.9
Q ss_pred eeccCCcc-cEEEEEEcC-CcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CCceeEEEeEEecCCeEEEEEeecCCCC
Q 043720 828 CIGSGGFG-TTYKAEISP-GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HPNLVTLIGYRASGNEMFLIYNYLPGGN 904 (1103)
Q Consensus 828 ~lg~G~fg-~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV~E~~~~gs 904 (1103)
.+..|..| .||+..... +..+++|+-... ....+.+|...++.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45556666 589886654 567889976533 3456788999888774 3336678889988899999999999988
Q ss_pred hHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCC--------------------------------------------
Q 043720 905 LENFIKARTSRAVDWKILHKIALDVASALAYLHDQC-------------------------------------------- 940 (1103)
Q Consensus 905 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~-------------------------------------------- 940 (1103)
+.+...... .....++.+++..+..||+..
T Consensus 107 ~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 107 AFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 877654321 223456667777777777421
Q ss_pred -----------CCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 941 -----------APRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 941 -----------~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
.+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12479999999999999877778999998753
No 422
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.98 E-value=4.1e-06 Score=79.23 Aligned_cols=67 Identities=19% Similarity=0.296 Sum_probs=41.2
Q ss_pred EEeccCcccc-CcChhhhhhcccccccccccccCcCCCCccccCCCCCceEeCCCCCCCCCCCCCccccccccccCCCCC
Q 043720 643 VLELSSNSLS-GEVPEGVVNLRNLTALLLDNNKLSGHLPSGLANVTSLSIFNASFNNLSGPFPWNVTTMNCSGVIGNPFL 721 (1103)
Q Consensus 643 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~l~~Np~~ 721 (1103)
.++.+++.++ ..+|..+ -++|+.|+|++|+|+...+..|..+++|+.| .|.+|||.
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L---------------------~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTA---------------------HLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEE---------------------ECCSSCCB
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEE---------------------EecCCCee
Confidence 4556666654 1233222 1346666666666665555556666666655 56789999
Q ss_pred CCCCCCCCCCC
Q 043720 722 DPCQMYKDISS 732 (1103)
Q Consensus 722 c~C~~~~~~~~ 732 (1103)
|||++..+..|
T Consensus 69 CdC~l~~l~~w 79 (130)
T 3rfe_A 69 CDCRLVPLRAW 79 (130)
T ss_dssp CSGGGHHHHHH
T ss_pred ccCccHHHHHH
Confidence 99998665544
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.94 E-value=2.2e-05 Score=88.74 Aligned_cols=145 Identities=11% Similarity=0.168 Sum_probs=90.3
Q ss_pred CCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCc--eeEEEeEEecC-CeEEEEEe
Q 043720 822 DFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPN--LVTLIGYRASG-NEMFLIYN 898 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~E 898 (1103)
.....+.++.|....+|+... +++.+++|+.... ..+.+|+.+++.+.... +.++++++... +..|+|||
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e 114 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISR 114 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEE
Confidence 344456789999999999976 4788999987532 24778888888875433 45677776654 67899999
Q ss_pred ecCCCChHH---------------HH---HhhcCC---c---c---------cHHHH---------------------HH
Q 043720 899 YLPGGNLEN---------------FI---KARTSR---A---V---------DWKIL---------------------HK 924 (1103)
Q Consensus 899 ~~~~gsL~~---------------~l---~~~~~~---~---l---------~~~~~---------------------~~ 924 (1103)
|++|.++.+ .+ +..... . + .|... ..
T Consensus 115 ~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~ 194 (362)
T 3ovc_A 115 RAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSAS 194 (362)
T ss_dssp CCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHH
T ss_pred ecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 998765532 11 111000 0 0 01101 01
Q ss_pred HHHHHHHHHHHHHhC-CCCCcccCCCCCCcEEECCCCCEEEeeccccccc
Q 043720 925 IALDVASALAYLHDQ-CAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLL 973 (1103)
Q Consensus 925 i~~~ia~gL~~LH~~-~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~ 973 (1103)
....+...++++... ..+.++|+|+++.||++++++.+.|+||+.+..-
T Consensus 195 ~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 195 VAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 111122222233222 1257899999999999987777889999988653
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.77 E-value=1.9e-05 Score=89.45 Aligned_cols=81 Identities=9% Similarity=0.062 Sum_probs=54.8
Q ss_pred ccee-ccCCcccEEEEEEc-------CCcEEEEEEcccccc--hhhHHHHHHHHHHHhcCC-C--CceeEEEeEEecC--
Q 043720 826 SNCI-GSGGFGTTYKAEIS-------PGILVAVKKLAVGRF--QHGVQQFHAEIKTLGNVR-H--PNLVTLIGYRASG-- 890 (1103)
Q Consensus 826 ~~~l-g~G~fg~V~~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~-- 890 (1103)
.+.| +.|....+|+.... +++.+++|+...... ......+.+|+.+++.+. + -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88999999998654 266788998654330 001234667888887774 2 3466788887665
Q ss_pred -CeEEEEEeecCCCChH
Q 043720 891 -NEMFLIYNYLPGGNLE 906 (1103)
Q Consensus 891 -~~~~lV~E~~~~gsL~ 906 (1103)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999886654
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.52 E-value=2.1e-05 Score=77.67 Aligned_cols=34 Identities=6% Similarity=-0.051 Sum_probs=17.5
Q ss_pred CCCEEEccCCCCcccCCccccCCCCCCEEEeecC
Q 043720 108 ELRVLSLPFNGFSGEFPPEIWSLEKLEVLDVEGN 141 (1103)
Q Consensus 108 ~L~~L~L~~n~l~g~~p~~l~~l~~L~~L~Ls~n 141 (1103)
.|+.|||+++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555555443344445555555555555
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.45 E-value=4.1e-05 Score=75.60 Aligned_cols=83 Identities=7% Similarity=0.117 Sum_probs=39.0
Q ss_pred CCCEEEccCCcCCCCCChhcccCCCCcEeeccccc-CCCCCChhHHh---hcCcCcEEECcCCc-cccccCccccCCCCC
Q 043720 180 SLEVLNLAGNQVKGVIPGFLGSFLKLRVLFLSYNE-LNGSIPSELGK---YCRYLEHLDLSGNS-LVGRIPSSLGKCQQL 254 (1103)
Q Consensus 180 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~g~ip~~~~~---~~~~L~~L~L~~N~-l~~~~p~~l~~l~~L 254 (1103)
.|++||++++.++..--..+..+++|++|+|++|. ++..--..+.. .+++|++|+|+++. +|..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444554444443323334455555555555553 44222222222 12346666666653 554333345555666
Q ss_pred CEEeCCCc
Q 043720 255 RTLLLFSN 262 (1103)
Q Consensus 255 ~~L~L~~N 262 (1103)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 66666655
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.42 E-value=0.00061 Score=74.78 Aligned_cols=138 Identities=17% Similarity=0.173 Sum_probs=91.8
Q ss_pred CcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC---CCceeEEEeEEecCCeEEEEEeecC
Q 043720 825 TSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR---HPNLVTLIGYRASGNEMFLIYNYLP 901 (1103)
Q Consensus 825 ~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lV~E~~~ 901 (1103)
..+.|+.|....+|+.... ++.+++|+.... ....+.+|+..++.+. ...+.++++++...+..++||||++
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 3467999999999999864 678889986543 2466788988888874 3667788888888889999999999
Q ss_pred CCChH--------H---HHHhhcC-C-------------------cccHHHHH---HHH----------------HHHHH
Q 043720 902 GGNLE--------N---FIKARTS-R-------------------AVDWKILH---KIA----------------LDVAS 931 (1103)
Q Consensus 902 ~gsL~--------~---~l~~~~~-~-------------------~l~~~~~~---~i~----------------~~ia~ 931 (1103)
+..+. + .++.... . .-+|.... ++. ..++.
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 87642 1 1222111 0 01343221 111 11111
Q ss_pred H-HHHHHh-CCCCCcccCCCCCCcEEECCCCCEEEeecc
Q 043720 932 A-LAYLHD-QCAPRVLHRDVKPSNILLDDDFNAYLSDFG 968 (1103)
Q Consensus 932 g-L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfg 968 (1103)
. ...|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 223432 2357899999999999999887 8899974
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.41 E-value=0.00024 Score=81.50 Aligned_cols=76 Identities=11% Similarity=0.024 Sum_probs=48.0
Q ss_pred cceeccCCcccEEEEEEc-CCcEEEEEEcccccc------hhhHHHHHHHHHHHhcCCC--C-ceeEEEeEEecCCeEEE
Q 043720 826 SNCIGSGGFGTTYKAEIS-PGILVAVKKLAVGRF------QHGVQQFHAEIKTLGNVRH--P-NLVTLIGYRASGNEMFL 895 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~l 895 (1103)
.+.+|.|.++.||++... +++.|+||....... ......+..|.++++.+.. + .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 457899999999999654 467899997643211 1123456678888877632 3 344566553 334589
Q ss_pred EEeecCCC
Q 043720 896 IYNYLPGG 903 (1103)
Q Consensus 896 V~E~~~~g 903 (1103)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 429
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.40 E-value=0.00066 Score=76.00 Aligned_cols=139 Identities=17% Similarity=0.318 Sum_probs=78.7
Q ss_pred ceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcC-----CCCceeEEE-e--EEecCCeEEEEEe
Q 043720 827 NCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNV-----RHPNLVTLI-G--YRASGNEMFLIYN 898 (1103)
Q Consensus 827 ~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lV~E 898 (1103)
+.|+.|..+.||++...+| .+++|+..... ..+..|+.+++.+ ..|.++... | +....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~-----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE-----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH-----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH-----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3466678899999987655 58899886521 2233344444433 234444311 1 1234667899999
Q ss_pred ecCCCChH-----------H---HHHhhcC-C--c---------ccHHH-------------------------------
Q 043720 899 YLPGGNLE-----------N---FIKARTS-R--A---------VDWKI------------------------------- 921 (1103)
Q Consensus 899 ~~~~gsL~-----------~---~l~~~~~-~--~---------l~~~~------------------------------- 921 (1103)
|++|..+. + .++.... . + -.|..
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1 1111110 0 0 11211
Q ss_pred HHHHHHHHHHHHHHHHh----------CCCCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 922 LHKIALDVASALAYLHD----------QCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 922 ~~~i~~~ia~gL~~LH~----------~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
+..+...+.+++++|++ ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11122234456666763 023589999999999999888899999999775
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.35 E-value=0.00027 Score=81.68 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=48.7
Q ss_pred CCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCccccCCcc--cccccCccccccCC---CCCcchhHHHHHHHH
Q 043720 941 APRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETHATTGVAG--TFGYVAPEYALTCR---VSDKADVYSYGVVLL 1015 (1103)
Q Consensus 941 ~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~~---~~~~sDvwslGvil~ 1015 (1103)
.+.++|||+++.||+++.++ ++++||+.+..-..... ...... ...|.+|+...... .....++......+|
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~D--la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFD--IGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHH--HHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHH--HHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 34899999999999998876 99999998875321100 000010 13466666553211 112355668888888
Q ss_pred HHHhCC
Q 043720 1016 ELISDK 1021 (1103)
Q Consensus 1016 elltg~ 1021 (1103)
+.+++.
T Consensus 308 ~~y~~~ 313 (420)
T 2pyw_A 308 NLFNKR 313 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887653
No 431
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.22 E-value=0.00083 Score=73.16 Aligned_cols=79 Identities=16% Similarity=0.134 Sum_probs=56.0
Q ss_pred CCCCcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-C--CceeEEEeEEecCCeEEEEEe
Q 043720 822 DFNTSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-H--PNLVTLIGYRASGNEMFLIYN 898 (1103)
Q Consensus 822 ~~~~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~~~lV~E 898 (1103)
++.-.+.+|.|..+.||+.+..+|+.|+||+....... ....|.+|+..|+.+. . --+.+++++. .-++|||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~-~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e 90 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA-LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC-CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc-hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence 45556789999999999999999999999987544322 2345678888888773 2 2344555553 2378999
Q ss_pred ecCCCCh
Q 043720 899 YLPGGNL 905 (1103)
Q Consensus 899 ~~~~gsL 905 (1103)
|++++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987643
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.96 E-value=0.00016 Score=72.84 Aligned_cols=117 Identities=15% Similarity=0.110 Sum_probs=66.9
Q ss_pred cCcccCCCCCCCEEEccCC-CCccc----CCccccCCCCCCEEEeecCCCCCC----ccccccCCCCCCEEEccccccCC
Q 043720 99 LSPLVGGLSELRVLSLPFN-GFSGE----FPPEIWSLEKLEVLDVEGNFLSGR----LPNEFVGLRNLRVLNLAFNRIDG 169 (1103)
Q Consensus 99 ~~~~l~~l~~L~~L~L~~n-~l~g~----~p~~l~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~ 169 (1103)
+...+.+-+.|++|+|++| .|... +-+.+..-+.|++|+|++|.|... +...+..-+.|++|+|++|.|+.
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3344566678888888875 66532 233445556778888888877632 33444455777777777777763
Q ss_pred C----CCCCCCCCCCCCEEEccCCc---CCC----CCChhcccCCCCcEeecccccC
Q 043720 170 D----IPFSLRNFESLEVLNLAGNQ---VKG----VIPGFLGSFLKLRVLFLSYNEL 215 (1103)
Q Consensus 170 ~----~p~~l~~l~~L~~L~L~~n~---l~~----~~p~~l~~l~~L~~L~L~~N~l 215 (1103)
. +-..+..-+.|++|+|++|. +.. .+...+..-+.|+.|+++.|.+
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 2 23344444567777776542 221 1223334445556666555543
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.85 E-value=0.00041 Score=69.80 Aligned_cols=118 Identities=15% Similarity=0.111 Sum_probs=55.1
Q ss_pred cccCCCCCCEEEcccc-ccCCC----CCCCCCCCCCCCEEEccCCcCCCC----CChhcccCCCCcEeecccccCCCCCC
Q 043720 150 EFVGLRNLRVLNLAFN-RIDGD----IPFSLRNFESLEVLNLAGNQVKGV----IPGFLGSFLKLRVLFLSYNELNGSIP 220 (1103)
Q Consensus 150 ~l~~l~~L~~L~Ls~N-~l~~~----~p~~l~~l~~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~g~ip 220 (1103)
.+..-+.|++|+|++| +|... +...+..-+.|+.|+|++|++... +...+..-+.|++|+|+.|.|+..--
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3344566777777664 55421 233344445566666666665522 11222233344444444444432111
Q ss_pred hhHHhhcCcCcEEECcCCccccccCccccCCCCCCEEeCCCc---cCCcc----ccccccCCCCCCEEEccCCcC
Q 043720 221 SELGKYCRYLEHLDLSGNSLVGRIPSSLGKCQQLRTLLLFSN---MLNDV----IPRELGWLRKLEVLDVSRNRL 288 (1103)
Q Consensus 221 ~~~~~~~~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N---~l~~~----~p~~l~~l~~L~~L~Ls~N~l 288 (1103)
.. +-..+..-+.|++|+|++| .+... +...+..-+.|+.|+++.|.+
T Consensus 116 ~a---------------------la~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 AR---------------------LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HH---------------------HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HH---------------------HHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 11 1223333445666666543 23321 334455556667777666554
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.80 E-value=0.0042 Score=69.09 Aligned_cols=140 Identities=11% Similarity=0.095 Sum_probs=72.1
Q ss_pred ceeccCCccc-EEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC--CCceeEEEeEEecCCeEEEEEeecCCC
Q 043720 827 NCIGSGGFGT-TYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR--HPNLVTLIGYRASGNEMFLIYNYLPGG 903 (1103)
Q Consensus 827 ~~lg~G~fg~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lV~E~~~~g 903 (1103)
+.|+.|.... +|+....++..+++|....... ..+..|+.+++.+. .-.+.+++.+....+ +++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 3465565554 7777654466777776543210 22334555555543 123455666654444 6899999776
Q ss_pred ChHHHHHhhcC------------------------CcccHHHHH-------H-H------------HHHHHHHHHHHHh-
Q 043720 904 NLENFIKARTS------------------------RAVDWKILH-------K-I------------ALDVASALAYLHD- 938 (1103)
Q Consensus 904 sL~~~l~~~~~------------------------~~l~~~~~~-------~-i------------~~~ia~gL~~LH~- 938 (1103)
.+.+++..... ..++..... . + ...+...++.+.+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 77655432110 001111100 0 0 0111122233311
Q ss_pred --CCCCCcccCCCCCCcEEECCC----CCEEEeecccccc
Q 043720 939 --QCAPRVLHRDVKPSNILLDDD----FNAYLSDFGLSRL 972 (1103)
Q Consensus 939 --~~~~~ivH~Dlk~~NIll~~~----~~~ki~Dfgla~~ 972 (1103)
...+.++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 123489999999999999874 6799999998864
No 435
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.76 E-value=0.0016 Score=61.30 Aligned_cols=56 Identities=16% Similarity=0.266 Sum_probs=34.8
Q ss_pred EEecCCCccc-ccCCchhhhcCCCccEEECcCCcCCCCCcccccCCCCCCEEEccCCcCC
Q 043720 546 VANLSNNNII-GHIPLDIGVMCKSLRVLDASHNQISGIVPQSLENLTSLVFLDLNGNKLQ 604 (1103)
Q Consensus 546 ~l~ls~n~~~-~~ip~~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 604 (1103)
.++.++++++ ..+|..+. ++|++|+|++|+|+.+.+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP---VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC---TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC---cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777775 46665544 45666666666666555555666666666666666543
No 436
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.59 E-value=0.016 Score=58.46 Aligned_cols=102 Identities=14% Similarity=0.147 Sum_probs=67.8
Q ss_pred ChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccCCCCCCcEEECCCCCEEEeecccccccCCCCCccccC
Q 043720 904 NLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRLLGTSETHATTG 983 (1103)
Q Consensus 904 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~ 983 (1103)
+|.+.|+... .+++++++|.++.|.+.+|.-.-.+. .-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 34 SL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 34 SLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred cHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc------------
Confidence 8999998764 67999999999999999988773221 111233457999999999998864 1110
Q ss_pred CcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCC
Q 043720 984 VAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKA 1023 (1103)
Q Consensus 984 ~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p 1023 (1103)
.....+.|||... ...+.+.=|||+|+++|.-+--+.|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122456888763 3456788999999999999865443
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.41 E-value=0.012 Score=64.87 Aligned_cols=158 Identities=13% Similarity=0.195 Sum_probs=87.7
Q ss_pred CCCHHHHHHHhcCCCC-----cceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-----CCc
Q 043720 810 PLTYESIIRATGDFNT-----SNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-----HPN 879 (1103)
Q Consensus 810 ~~~~~~~~~~~~~~~~-----~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~n 879 (1103)
+++.+++.....+|.. .+.|+.|....+|+....+| .+++|+....... +.+..|+.+++.+. -|.
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~~---~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVEK---NDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---C---CHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCCH---HHHHHHHHHHHHHHHCCCCCCc
Confidence 4556666666666655 24577788899999987755 6888987653211 23445666655543 233
Q ss_pred eeEEE-e--EEecCCeEEEEEeecCCCChHH-----------H---HHhhc-C---C------cccHHHHHH--------
Q 043720 880 LVTLI-G--YRASGNEMFLIYNYLPGGNLEN-----------F---IKART-S---R------AVDWKILHK-------- 924 (1103)
Q Consensus 880 iv~l~-~--~~~~~~~~~lV~E~~~~gsL~~-----------~---l~~~~-~---~------~l~~~~~~~-------- 924 (1103)
++... | +....+..+++++|++|..+.. . ++... . . ...|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 33211 1 1122456799999998865311 1 11110 0 0 011222110
Q ss_pred ----HHHHHHHHHHHHHhC----CCCCcccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 925 ----IALDVASALAYLHDQ----CAPRVLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 925 ----i~~~ia~gL~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
+...+.+.++++++. ....++|+|+.+.||+++++..+.|+||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455566532 13479999999999999887666899998775
No 438
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.38 E-value=0.022 Score=62.91 Aligned_cols=158 Identities=15% Similarity=0.165 Sum_probs=87.6
Q ss_pred CCCHHHHHHHhcCCCC-----cceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCc--eeE
Q 043720 810 PLTYESIIRATGDFNT-----SNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPN--LVT 882 (1103)
Q Consensus 810 ~~~~~~~~~~~~~~~~-----~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 882 (1103)
.++.+.+......|.+ ...++ |....||+....+|+.+++|....... ....+..|..+++.+.... +.+
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecc
Confidence 3455555555444432 23566 888899999877777899999863321 2345556777666653211 333
Q ss_pred EEeE-----EecCCeEEEEEeecCCCChH-----H------H---HHhhc-------CCcccHHHH----HHH-------
Q 043720 883 LIGY-----RASGNEMFLIYNYLPGGNLE-----N------F---IKART-------SRAVDWKIL----HKI------- 925 (1103)
Q Consensus 883 l~~~-----~~~~~~~~lV~E~~~~gsL~-----~------~---l~~~~-------~~~l~~~~~----~~i------- 925 (1103)
++.. ....+..++||||++|..+. . . ++... ....++... ..+
T Consensus 87 ~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 166 (328)
T 1zyl_A 87 PVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLI 166 (328)
T ss_dssp CCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSS
T ss_pred eeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcC
Confidence 3332 22355678999999875431 1 1 11110 001121111 001
Q ss_pred --------HHHHHHHHHHHHhC----CCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 926 --------ALDVASALAYLHDQ----CAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 926 --------~~~ia~gL~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
...+...++.+.+. ....++|||+++.||+++ + .+.|+||+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 167 PSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 234789999999999999 4 899999987753
No 439
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.32 E-value=0.0049 Score=67.44 Aligned_cols=71 Identities=7% Similarity=0.024 Sum_probs=43.3
Q ss_pred cceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCce-eEEEeEEecCCeEEEEEeec-CCC
Q 043720 826 SNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNL-VTLIGYRASGNEMFLIYNYL-PGG 903 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~-~~g 903 (1103)
.+.|+.|....+|+. +.+++|+....... .....+|+..++.+....+ .++++++.+ .-++|+||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCCCc
Confidence 677999999999999 56888887653211 1123457766666542222 345555432 346899999 654
Q ss_pred Ch
Q 043720 904 NL 905 (1103)
Q Consensus 904 sL 905 (1103)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 44
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.24 E-value=0.0084 Score=67.51 Aligned_cols=141 Identities=15% Similarity=0.170 Sum_probs=83.3
Q ss_pred cceeccCCcccEEEEEEc--------CCcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CCceeEEEeEEecCCeEEEE
Q 043720 826 SNCIGSGGFGTTYKAEIS--------PGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 896 (1103)
.+.+..|-...+|++... +++.|++|+.... ......+.+|..+++.+. +.-..++++++.+ .+|
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 345777888999999765 2478999986432 123456668999888774 3223566776654 289
Q ss_pred EeecCCCChHH--------------HHHh---hc---CCcc--cHHHHHHHHHHHHH-------------------HHHH
Q 043720 897 YNYLPGGNLEN--------------FIKA---RT---SRAV--DWKILHKIALDVAS-------------------ALAY 935 (1103)
Q Consensus 897 ~E~~~~gsL~~--------------~l~~---~~---~~~l--~~~~~~~i~~~ia~-------------------gL~~ 935 (1103)
|||++|..+.. .+.+ .. ++.. -+.++.++..++.. .++.
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 99998765421 1111 10 0111 23455555544322 2333
Q ss_pred HH----hC-CCCCcccCCCCCCcEEECCC----CCEEEeecccccc
Q 043720 936 LH----DQ-CAPRVLHRDVKPSNILLDDD----FNAYLSDFGLSRL 972 (1103)
Q Consensus 936 LH----~~-~~~~ivH~Dlk~~NIll~~~----~~~ki~Dfgla~~ 972 (1103)
|. .. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 32 22 23479999999999999876 7899999998763
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.15 E-value=0.0048 Score=71.16 Aligned_cols=72 Identities=15% Similarity=0.093 Sum_probs=48.2
Q ss_pred cceeccCCcccEEEEEEcC--------CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCce-eEEEeEEecCCeEEEE
Q 043720 826 SNCIGSGGFGTTYKAEISP--------GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNL-VTLIGYRASGNEMFLI 896 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV 896 (1103)
.+.|+.|....||++...+ +..+++|+...... ...+.+|..+++.+...++ .++++.+.. .+|
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 3458888899999998653 47899998843211 1344578888887743333 566776543 389
Q ss_pred EeecCCCC
Q 043720 897 YNYLPGGN 904 (1103)
Q Consensus 897 ~E~~~~gs 904 (1103)
+||++|.+
T Consensus 151 ~e~l~G~~ 158 (429)
T 1nw1_A 151 EEYIPSRP 158 (429)
T ss_dssp ECCCCEEE
T ss_pred EEEeCCcc
Confidence 99998643
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.49 E-value=0.0096 Score=67.22 Aligned_cols=73 Identities=14% Similarity=0.049 Sum_probs=42.9
Q ss_pred ceeccCCcccEEEEEEcC---------CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCc-eeEEEeEEecCCeEEEE
Q 043720 827 NCIGSGGFGTTYKAEISP---------GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPN-LVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 827 ~~lg~G~fg~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lV 896 (1103)
+.++.|....+|+....+ ++.+++|+....... ..+...|..+++.+...+ +.++++... + ++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~--~~~~~~E~~~l~~L~~~g~~P~~~~~~~--~--~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE--LYNTISEFEVYKTMSKYKIAPQLLNTFN--G--GRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG--TSCHHHHHHHHHHHHHTTSSCCEEEEET--T--EEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc--eecHHHHHHHHHHHHhcCCCCceEEecC--C--cEE
Confidence 457788888999997654 268888887543211 112356777777764223 345665542 2 689
Q ss_pred EeecCCCCh
Q 043720 897 YNYLPGGNL 905 (1103)
Q Consensus 897 ~E~~~~gsL 905 (1103)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.41 E-value=0.02 Score=66.30 Aligned_cols=74 Identities=12% Similarity=0.002 Sum_probs=47.4
Q ss_pred cceeccCCcccEEEEEEcC-CcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCce-eEEEeEEecCCeEEEEEeecCCC
Q 043720 826 SNCIGSGGFGTTYKAEISP-GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNL-VTLIGYRASGNEMFLIYNYLPGG 903 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~E~~~~g 903 (1103)
.+.|+.|-...+|++...+ +..+++|+...... ...+..+|..+++.+...++ .++++++. + .+|+||++|.
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~--~~idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~ 186 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD--EIINREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGY 186 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC--SCSCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh--hhcCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCc
Confidence 4568889999999998775 47888998754321 11122578888888864444 46777763 2 2599999875
Q ss_pred Ch
Q 043720 904 NL 905 (1103)
Q Consensus 904 sL 905 (1103)
++
T Consensus 187 ~l 188 (458)
T 2qg7_A 187 AL 188 (458)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.36 E-value=0.041 Score=61.16 Aligned_cols=31 Identities=23% Similarity=0.443 Sum_probs=27.7
Q ss_pred CCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 942 PRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 942 ~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
..++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987764
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.53 E-value=0.068 Score=60.35 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=81.1
Q ss_pred ceeccCCcccEEEEEEcC--------CcEEEEEEcccccch----------hh-------HHHHHHHHHHHhcCC-CCce
Q 043720 827 NCIGSGGFGTTYKAEISP--------GILVAVKKLAVGRFQ----------HG-------VQQFHAEIKTLGNVR-HPNL 880 (1103)
Q Consensus 827 ~~lg~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~----------~~-------~~~~~~E~~~l~~l~-h~ni 880 (1103)
+.|..|-...+|++...+ +..|.+++....... -. .+....|..+++.+. +--.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 346668888899987653 367888887543211 00 112335888887774 3334
Q ss_pred eEEEeEEecCCeEEEEEeecCCCChHH--------------HHHhhcC------Ccc--cHHHHHHHHHHHH--------
Q 043720 881 VTLIGYRASGNEMFLIYNYLPGGNLEN--------------FIKARTS------RAV--DWKILHKIALDVA-------- 930 (1103)
Q Consensus 881 v~l~~~~~~~~~~~lV~E~~~~gsL~~--------------~l~~~~~------~~l--~~~~~~~i~~~ia-------- 930 (1103)
.++++++..+ +|+||+++.+|.. .+++-.. ... -+..+.++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776542 8999998654411 1111000 111 1233433433221
Q ss_pred --------------HHH----HHHHhC-CCCCcccCCCCCCcEEECCC------CCEEEeeccccc
Q 043720 931 --------------SAL----AYLHDQ-CAPRVLHRDVKPSNILLDDD------FNAYLSDFGLSR 971 (1103)
Q Consensus 931 --------------~gL----~~LH~~-~~~~ivH~Dlk~~NIll~~~------~~~ki~Dfgla~ 971 (1103)
+-+ +++... ....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223322 23478999999999999876 789999998875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.70 E-value=0.15 Score=58.00 Aligned_cols=140 Identities=13% Similarity=0.090 Sum_probs=82.3
Q ss_pred cceeccCCcccEEEEEEcC--------CcEEEEEEcccccchhhHHHHHHHHHHHhcCC-CCceeEEEeEEecCCeEEEE
Q 043720 826 SNCIGSGGFGTTYKAEISP--------GILVAVKKLAVGRFQHGVQQFHAEIKTLGNVR-HPNLVTLIGYRASGNEMFLI 896 (1103)
Q Consensus 826 ~~~lg~G~fg~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lV 896 (1103)
.+.+..|-...+|+....+ ++.|++|+...... ..-+..+|..+++.+. +.-..++++.+. + ++|
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~--~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~~I 148 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG--KFYDSKVELDVFRYLSNINIAPNIIADFP--E--GRI 148 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--EEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc--hhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--CEE
Confidence 3457778889999997763 57899998754321 1123456777777764 222345555432 2 689
Q ss_pred EeecCCCChHH--------------HHH---h--h---------cCCcccHHHHHHHHHHH-------------------
Q 043720 897 YNYLPGGNLEN--------------FIK---A--R---------TSRAVDWKILHKIALDV------------------- 929 (1103)
Q Consensus 897 ~E~~~~gsL~~--------------~l~---~--~---------~~~~l~~~~~~~i~~~i------------------- 929 (1103)
+||++|..+.. .+. . . ...+.-+.++.++..++
T Consensus 149 ~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 228 (424)
T 3mes_A 149 EEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKI 228 (424)
T ss_dssp EECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHH
T ss_pred EEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHH
Confidence 99998865311 111 0 0 00111234443333222
Q ss_pred HHHHHHHHhC---------------------CCCCcccCCCCCCcEEECCCCCEEEeecccccc
Q 043720 930 ASALAYLHDQ---------------------CAPRVLHRDVKPSNILLDDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 930 a~gL~~LH~~---------------------~~~~ivH~Dlk~~NIll~~~~~~ki~Dfgla~~ 972 (1103)
...+++|.+. ....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 229 ~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 229 LEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2233333211 1246899999999999 7788999999998864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.48 E-value=1.2 Score=50.31 Aligned_cols=30 Identities=33% Similarity=0.450 Sum_probs=25.3
Q ss_pred CcccCCCCCCcEEE------CCCCCEEEeecccccc
Q 043720 943 RVLHRDVKPSNILL------DDDFNAYLSDFGLSRL 972 (1103)
Q Consensus 943 ~ivH~Dlk~~NIll------~~~~~~ki~Dfgla~~ 972 (1103)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567799999998864
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=82.15 E-value=0.9 Score=32.77 Aligned_cols=29 Identities=24% Similarity=0.395 Sum_probs=14.1
Q ss_pred eeeeehhHHHHHHHHHHHHHhhhhcccCC
Q 043720 760 QIASIVSASAIVLILLTLVILFFYVRKGF 788 (1103)
Q Consensus 760 ~i~~iv~~~~ivl~l~~~~~~~~~~~~~~ 788 (1103)
.|++.|++.+++++++++..+++++||+.
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 35555554444444444555555555543
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=81.70 E-value=1.3 Score=44.64 Aligned_cols=123 Identities=13% Similarity=0.178 Sum_probs=82.1
Q ss_pred HHHHHhcCCCCceeEEEeEEecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCCCCcccC
Q 043720 868 EIKTLGNVRHPNLVTLIGYRASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCAPRVLHR 947 (1103)
Q Consensus 868 E~~~l~~l~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH~ 947 (1103)
|+..+.. .||+.+.. .+..+.+.+.+.++.-+ +...|-.- +..+...+++++.+|+....+++.. +|-
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~~r-----~tf 103 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNRTR-----YTF 103 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGGSS-----EEC
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhcCc-----eEE
Confidence 3444433 68888876 56666676666666543 33333222 2277889999999999988777654 788
Q ss_pred CCCCCcEEECCCCCEEEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 043720 948 DVKPSNILLDDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALD 1025 (1103)
Q Consensus 948 Dlk~~NIll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~ 1025 (1103)
-+.|+|++++.++.+++.-.|+...+ +|.. .++..=.-.+=+++..+++++..|+
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l------------------~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVV------------------DPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTB------------------SCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEecceEEEcCCCCEEEEEccCccCC------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 89999999999999999877764322 2221 1122223456678888999887775
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=79.27 E-value=0.99 Score=32.48 Aligned_cols=30 Identities=23% Similarity=0.357 Sum_probs=14.3
Q ss_pred eeeeehhHHHHHHHHHHHHHhhhhcccCCC
Q 043720 760 QIASIVSASAIVLILLTLVILFFYVRKGFP 789 (1103)
Q Consensus 760 ~i~~iv~~~~ivl~l~~~~~~~~~~~~~~~ 789 (1103)
.|+..|++.+++++++++..+++++||+..
T Consensus 11 aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 344444443444444444555555555443
No 451
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=77.71 E-value=1 Score=31.38 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=18.6
Q ss_pred eeeeeehhHHHHHHHHHHHHHhhhhccc
Q 043720 759 IQIASIVSASAIVLILLTLVILFFYVRK 786 (1103)
Q Consensus 759 ~~i~~iv~~~~ivl~l~~~~~~~~~~~~ 786 (1103)
-.|+.+|+++++.+++++.+.+|+++||
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CceeeeehHHHHHHHHHHHHHHHHeecC
Confidence 3466677777776777777777666653
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=77.51 E-value=5 Score=40.52 Aligned_cols=115 Identities=14% Similarity=0.158 Sum_probs=76.4
Q ss_pred CCCceeEEEeEEecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHH-HHHhCCCCCcccCCCCCCcE
Q 043720 876 RHPNLVTLIGYRASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALA-YLHDQCAPRVLHRDVKPSNI 954 (1103)
Q Consensus 876 ~h~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~-~LH~~~~~~ivH~Dlk~~NI 954 (1103)
.||++ -..+..+.+.+.+.++.-+++.=...++. ++...+++++.+++.... +++++ +|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-----~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-----TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-----SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-----cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceE
Confidence 57887 44555677777777776533322222322 678899999999998887 66644 7888999999
Q ss_pred EECCCCCEEEeecccccccCCCCCccccCCcccccccCccccccCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 043720 955 LLDDDFNAYLSDFGLSRLLGTSETHATTGVAGTFGYVAPEYALTCRVSDKADVYSYGVVLLELISDKKALD 1025 (1103)
Q Consensus 955 ll~~~~~~ki~Dfgla~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslGvil~elltg~~p~~ 1025 (1103)
+++.++.++|.-.|+-.. ++|..+ ++.-=.-.+=+++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~~------------------lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKES------------------LPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTT------------------BSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCccc------------------CCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999987775432 233321 111123355667777888776664
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=73.60 E-value=1.4 Score=31.68 Aligned_cols=27 Identities=22% Similarity=0.370 Sum_probs=12.7
Q ss_pred eeeeehhHHHHHHHHHHHHHhhhhcccC
Q 043720 760 QIASIVSASAIVLILLTLVILFFYVRKG 787 (1103)
Q Consensus 760 ~i~~iv~~~~ivl~l~~~~~~~~~~~~~ 787 (1103)
.++.+|++ +++++++++.++++.+||+
T Consensus 13 ~Ia~~vVG-vll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 13 SIISAVVG-ILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHH-HHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHH-HHHHHHHHHHHHhheehhh
Confidence 35555555 3334444444444444444
No 454
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=72.08 E-value=0.5 Score=54.57 Aligned_cols=62 Identities=8% Similarity=0.111 Sum_probs=18.0
Q ss_pred CCcceeccCCcccEEEEEEcC-CcEEEE------EEcccccc-hhhHHHHHHHHHHHhcCCCCceeEEEeEEe
Q 043720 824 NTSNCIGSGGFGTTYKAEISP-GILVAV------KKLAVGRF-QHGVQQFHAEIKTLGNVRHPNLVTLIGYRA 888 (1103)
Q Consensus 824 ~~~~~lg~G~fg~V~~~~~~~-~~~vav------K~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 888 (1103)
.+.+.+| ||+||+|.+.. ..+||| |+.+.+.. .+....+.+|..+++..+|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3455676 99999998764 367888 76654332 234467888999999999999999988754
No 455
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=48.96 E-value=7.9 Score=29.22 Aligned_cols=28 Identities=25% Similarity=0.282 Sum_probs=14.9
Q ss_pred ceeeeeehhHHHHHHHHHHHHHhhhhcc
Q 043720 758 KIQIASIVSASAIVLILLTLVILFFYVR 785 (1103)
Q Consensus 758 ~~~i~~iv~~~~ivl~l~~~~~~~~~~~ 785 (1103)
...+..|+.++...+++++++++..|++
T Consensus 9 ~vp~wiIi~svl~GLllL~li~~~LwK~ 36 (54)
T 2knc_A 9 AIPIWWVLVGVLGGLLLLTILVLAMWKV 36 (54)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445555555555555555555555443
No 456
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=42.06 E-value=20 Score=25.57 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=17.8
Q ss_pred ceeeeeehhHHHHHHHHHHHHHhhhhcccCC
Q 043720 758 KIQIASIVSASAIVLILLTLVILFFYVRKGF 788 (1103)
Q Consensus 758 ~~~i~~iv~~~~ivl~l~~~~~~~~~~~~~~ 788 (1103)
...+..|+..+...+++++++++..|++..+
T Consensus 7 ~vp~wiIi~s~l~GLllL~li~~~LwK~GFF 37 (42)
T 2k1a_A 7 AIPIWWVLVGVLGGLLLLTILVLAMWKVGFF 37 (42)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 3445555656666666666666666654433
No 457
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=41.13 E-value=12 Score=28.12 Aligned_cols=26 Identities=27% Similarity=0.324 Sum_probs=13.5
Q ss_pred eeeeehhHHHHHHHHHHHHHhhhhcc
Q 043720 760 QIASIVSASAIVLILLTLVILFFYVR 785 (1103)
Q Consensus 760 ~i~~iv~~~~ivl~l~~~~~~~~~~~ 785 (1103)
.+..|+.++.+.+++++++++..|++
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~ 33 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKI 33 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34445555555555555555555543
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=29.14 E-value=9.2 Score=25.95 Aligned_cols=7 Identities=14% Similarity=0.173 Sum_probs=2.7
Q ss_pred hhhhccc
Q 043720 780 LFFYVRK 786 (1103)
Q Consensus 780 ~~~~~~~ 786 (1103)
.++++||
T Consensus 28 ~~~iRRr 34 (35)
T 1iij_A 28 GILIKRR 34 (35)
T ss_dssp THHHHHC
T ss_pred heEEeec
Confidence 3334443
No 459
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=28.52 E-value=3.7e+02 Score=31.50 Aligned_cols=83 Identities=14% Similarity=0.243 Sum_probs=50.0
Q ss_pred eEEEeEEecCCeEEEEEeecCCCChHH----------HHHhhcCC-----cccHHHHHHHHHHHHH--HHHHHHhCCCCC
Q 043720 881 VTLIGYRASGNEMFLIYNYLPGGNLEN----------FIKARTSR-----AVDWKILHKIALDVAS--ALAYLHDQCAPR 943 (1103)
Q Consensus 881 v~l~~~~~~~~~~~lV~E~~~~gsL~~----------~l~~~~~~-----~l~~~~~~~i~~~ia~--gL~~LH~~~~~~ 943 (1103)
++.+.+...+....+ .|++++.++.+ |+++.... ...+..+..++..+|- .+.|+=.-
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 344555555555554 36666544444 44332211 1224555556655443 34444432
Q ss_pred cccCCCCCCcEEECCCCCEEEeeccccc
Q 043720 944 VLHRDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 944 ivH~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
+|=.++|||++.+|++.=+|||.+.
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 6889999999999999999999874
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=26.69 E-value=1.3e+02 Score=25.95 Aligned_cols=47 Identities=13% Similarity=0.095 Sum_probs=28.0
Q ss_pred cCCCCCcccccCCCCCCEEEccCCcCCCCCCcccccCccCcEEeccCc
Q 043720 578 QISGIVPQSLENLTSLVFLDLNGNKLQGEIPSSLHRLKYLRHLSLADN 625 (1103)
Q Consensus 578 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 625 (1103)
.++.+-..+|.++++|+.+.|..+ ++..-..+|..+.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344455566667777777776654 33344556666666666666543
No 461
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=32.27 E-value=14 Score=25.50 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=9.6
Q ss_pred hhHHHHHHHHHHHHHhhhhcccCCC
Q 043720 765 VSASAIVLILLTLVILFFYVRKGFP 789 (1103)
Q Consensus 765 v~~~~ivl~l~~~~~~~~~~~~~~~ 789 (1103)
+++.+.+++++..+++.+...+++|
T Consensus 12 ~avlal~vi~iisLIiLi~~w~qKP 36 (39)
T 2l6w_A 12 SAILALVVLTIISLIILIMLWQKKP 36 (39)
Confidence 3333444333333333333333333
No 462
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.85 E-value=56 Score=28.22 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=36.1
Q ss_pred cccccCCccccccccCcEEEcCCcccccccchhhhccCCceEeecCCc
Q 043720 362 NLEGKLPSSWGACESLEMLNLAQNVLRGDLIGVFDRCKKLHFIDLSSN 409 (1103)
Q Consensus 362 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~LdLs~N 409 (1103)
.++.+-..+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344455578888899999988764 66677888999999998888754
No 463
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=23.95 E-value=17 Score=20.98 Aligned_cols=9 Identities=44% Similarity=1.217 Sum_probs=7.1
Q ss_pred CCCceeeeE
Q 043720 34 SHCSWFGVS 42 (1103)
Q Consensus 34 ~~C~W~GV~ 42 (1103)
.-|+|.|.+
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 369999975
No 464
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=22.50 E-value=1.4e+02 Score=31.96 Aligned_cols=140 Identities=11% Similarity=0.119 Sum_probs=70.8
Q ss_pred CcceeccCCcccEEEEEEcCCcEEEEEEcccccchhhHHHHHHHHHHHhcCCCCceeEEEeE------------------
Q 043720 825 TSNCIGSGGFGTTYKAEISPGILVAVKKLAVGRFQHGVQQFHAEIKTLGNVRHPNLVTLIGY------------------ 886 (1103)
Q Consensus 825 ~~~~lg~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------------------ 886 (1103)
.++..-.|. +-||.+.. ++..|+||-.. .-..+.+-.++...-.+.-|...-+.-.
T Consensus 73 ~I~~s~~Gs-tgvff~~t-d~~~~VVK~s~----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 73 GIERSEKGT-EGLFFVET-ESGVFIVKRST----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EEEECCSTT-SCEEEEEE-SSCEEEEECCT----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSS
T ss_pred EEEeccCCC-CCeEEEEe-CCCEEEEeCcH----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhh
Confidence 344445555 45555554 47789999442 2123444455555555555553322211
Q ss_pred ----EecCCeEEEEEeecCCCChHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHhCCC-CCcc-cCCCCCCcEEECCCC
Q 043720 887 ----RASGNEMFLIYNYLPGGNLENFIKARTSRAVDWKILHKIALDVASALAYLHDQCA-PRVL-HRDVKPSNILLDDDF 960 (1103)
Q Consensus 887 ----~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~-~~iv-H~Dlk~~NIll~~~~ 960 (1103)
....+.+.++|||++|..|.+.-.......+..+....+ +-+-+++++..... -+.+ +.-=.+.|||++.++
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~L--G~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n 224 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQL--GSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERG 224 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHH--HHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBT
T ss_pred HHHHHhhcccceehhhhcCCCccccchhhhhhhhcCHHHHHhh--chhheehhhhcCCccCcccccCCCChhheEEeCCC
Confidence 001235779999998766654311100001222222211 11334555554421 1222 123578999997655
Q ss_pred C-EEEeecccccc
Q 043720 961 N-AYLSDFGLSRL 972 (1103)
Q Consensus 961 ~-~ki~Dfgla~~ 972 (1103)
. +.++|-+.+..
T Consensus 225 ~~~~~IDhn~af~ 237 (342)
T 1cja_A 225 ATVVPIDSKIIPL 237 (342)
T ss_dssp TCEEECSCCCCCC
T ss_pred CeEEEEcCCcccc
Confidence 4 89999998864
No 465
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=21.68 E-value=3.3e+02 Score=32.49 Aligned_cols=25 Identities=28% Similarity=0.367 Sum_probs=23.3
Q ss_pred CCCCCCcEEECCCCCEEEeeccccc
Q 043720 947 RDVKPSNILLDDDFNAYLSDFGLSR 971 (1103)
Q Consensus 947 ~Dlk~~NIll~~~~~~ki~Dfgla~ 971 (1103)
+|=.++|||++.+|.+.=+|||.+.
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCCcceEEeCCCCEEEEeehhhh
Confidence 7899999999999999999999874
Done!